Gene: Tcf3 (transcription factor 3) Rattus norvegicus
Analyze
Symbol: Tcf3
Name: transcription factor 3
Description: ENCODES a protein that exhibits bHLH transcription factor binding; E-box binding; PDZ domain binding; INVOLVED IN positive regulation of gene expression; positive regulation of transcription, DNA-templated; B cell lineage commitment (ortholog); PARTICIPATES IN acute myeloid leukemia pathway; arrhythmogenic right ventricular cardiomyopathy pathway; basal cell carcinoma pathway; ASSOCIATED WITH agammaglobulinemia (ortholog); Agammaglobulinemia 8, Autosomal Dominant (ortholog); Burkitt lymphoma (ortholog); FOUND IN transcription factor complex; cytoplasm (ortholog); nuclear chromatin (ortholog); INTERACTS WITH 2,4-dinitrotoluene; 6-propyl-2-thiouracil; bisphenol A
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: immunoglobulin enhancer-binding factor E12/E47; LOC100364490; LOC688265; Pan2; pancreas specific transcription factor 1c; similar to Transcription factor E2-alpha (Immunoglobulin enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Transcription regulator Pan); TCF-3; Tcfe2a; transcription factor E2-alpha; transcription factor E2a; transcription factor E2a-like; transcription regulator Pan
Orthologs:
Homo sapiens (human) : TCF3 (transcription factor 3)  HGNC  Alliance
Mus musculus (house mouse) : Tcf3 (transcription factor 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcf3 (transcription factor 3)
Pan paniscus (bonobo/pygmy chimpanzee) : TCF3 (transcription factor 3)
Canis lupus familiaris (dog) : TCF3 (transcription factor 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcf3 (transcription factor 3)
Sus scrofa (pig) : TCF3 (transcription factor 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0712,146,642 - 12,168,400 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0712,316,323 - 12,338,455 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4710,791,311 - 10,813,613 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1710,791,310 - 10,813,165 (+)NCBI
Celera77,461,200 - 7,481,028 (+)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Tcf3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620914
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE