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Gene: Cd1d1 (CD1d1 molecule) Rattus norvegicus
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Symbol: Cd1d1
Name: CD1d1 molecule
Description: Predicted to have several functions, including T cell receptor binding activity; lipid antigen binding activity; and lipopeptide binding activity. Predicted to be involved in several processes, including T cell differentiation; positive regulation of cytokine biosynthetic process; and regulation of leukocyte activation. Predicted to localize to several cellular components, including the endosome; external side of plasma membrane; and lysosome. Orthologous to human CD1D (CD1d molecule); PARTICIPATES IN Entamoebiasis pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2-nitrofluorene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: antigen-presenting glycoprotein CD1d; Cd1; Cd1d; CD1D antigen; CD1D antigen also localized to RNO7q32 but is presumably on chromosome 2; CD1d1 antigen; T-cell surface glycoprotein CD1d
Orthologs:
Homo sapiens (human) : CD1D (CD1d molecule)  HGNC  Alliance
Mus musculus (house mouse) : Cd1d1 (CD1d1 antigen)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : CD1D (CD1d molecule)
Canis lupus familiaris (dog) : CD1D (CD1d molecule)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02186,330,298 - 186,333,805 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2186,330,298 - 186,333,805 (-)Ensembl
Rnor_5.02205,728,725 - 205,732,232 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42179,011,165 - 179,014,672 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12178,961,270 - 178,964,778 (-)NCBI
Celera2166,382,474 - 166,385,981 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cd1d1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2296
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.