Cm89 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cm89 (Cardiac mass QTL 89) Rattus norvegicus

Symbol: Cm89
Name: Cardiac mass QTL 89
RGD ID: 12879845
Also known as: CakmC2QTL
Trait: heart left ventricle mass   (VT:0007031)    
Measurement Type: heart left ventricle weight to body weight ratio   (CMO:0000530)    
LOD Score: Not Available
P Value: 0.008
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22152,413,072 - 175,950,118RGD_MAPPER_PIPELINE
Rnor_6.02172,795,683 - 189,857,032RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02192,132,537 - 209,287,892RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42158,146,823 - 182,740,242RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: SS.MNS-(D2Chm25-Fgg)/Ayd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Duong C, etal., Mamm Genome. 2006 Dec;17(12):1147-61. Epub 2006 Dec 1.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1309962Schip1schwannomin interacting protein 12172312290173087236Rat
7559921LOC102547484uncharacterized LOC1025474842172796805172801793Rat
1592026LOC365821similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)2173434961173436479Rat
1308632Zbbxzinc finger, B-box domain containing2173453609173565422Rat
9445296LOC103691603zinc finger B-box domain-containing protein 1 pseudogene2173489063173490081Rat
619897Serpini2serpin family I member 22173640385173670790Rat
1564622Wdr49WD repeat domain 492173675780173800840Rat
7628277LOC102556029keratin, type II cytoskeletal 8-like2173771800173772597Rat
9083622LOC103691588uncharacterized LOC1036915882173893931173911517Rat
1359329Pdcd10programmed cell death 102173966701174012730Rat
9382406LOC103691589uncharacterized LOC1036915892173997202174002922Rat
619896Serpini1serpin family I member 12174013058174111693Rat
11487146LOC108350036uncharacterized LOC1083500362174203732174296254Rat
1310948Golim4golgi integral membrane protein 42174321303174413847Rat
7724888LOC102547227uncharacterized LOC1025472272174426558174453469Rat
1306858Fstl5follistatin-like 52174542667175234835Rat
11429484LOC108350037uncharacterized LOC1083500372175038469175052016Rat
1592025LOC365824similar to FtsJ homolog 3 (E. coli)2175308050175311662Rat
2323101LOC100359944hypothetical LOC1003599442175414789175444100Rat
9131464LOC103691605glyceraldehyde-3-phosphate dehydrogenase pseudogene2175573357175574572Rat
11359479LOC108350038uncharacterized LOC1083500382175657100175697647Rat
11405608LOC108350040uncharacterized LOC1083500402175709823175711735Rat
11480253LOC108350195igE-binding protein-like2176451859176456265Rat
1592730LOC684215similar to forkhead box K2 isoform 12176503613176505582Rat
1592024LOC365825similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)2176681055176682000Rat
9412497LOC103691590uncharacterized LOC1036915902177252918177260506Rat
11356765LOC108350041uncharacterized LOC1083500412177334931177344193Rat
7716615LOC102553057uncharacterized LOC1025530572177434092177489610Rat
9261171LOC103690241uncharacterized LOC1036902412177434092177535213Rat
1592056LOC361966similar to Heat shock protein HSP 90-beta (HSP 84)2177641905177650737Rat
1591978Hsc70-ps1heat shock cognate protein 70, pseudogene 12177651231177653349Rat
2324841LOC100363048rCG47273-like2177654521177654799Rat
1306434Rapgef2Rap guanine nucleotide exchange factor 22177836191178057378Rat
9376104LOC103691593histone H3.3-like2177934099177935059Rat
9112695LOC103691592uncharacterized LOC1036915922177994418177997399Rat
9334199LOC103691591uncharacterized LOC1036915912178049955178051670Rat
9272775LOC103691594uncharacterized LOC1036915942178109783178117371Rat
1566255LOC499643similar to hypothetical protein FLJ253712178117385178231388Rat
11406875LOC108350042uncharacterized LOC1083500422178203116178214955Rat
1592023LOC365827similar to 60S ribosomal protein L72178212078178213029Rat
1562174Fnip2folliculin interacting protein 22178223561178334925Rat
7649644LOC10255400240S ribosomal protein S2-like2178346532178348036Rat
1303174Ppidpeptidylprolyl isomerase D2178354830178366843Rat
735052Etfdhelectron transfer flavoprotein dehydrogenase2178367547178389641Rat
1560010RGD1560010RGD15600102178389986178393118Rat
1302973Rxfp1relaxin family peptide receptor 12178402411178520213Rat
11417312LOC108350043uncharacterized LOC1083500432178520260178536779Rat
1565845Tmem144transmembrane protein 1442178585586178617094Rat
7614516LOC102556854uncharacterized LOC1025568542178621336178626251Rat
735075Gask1bgolgi associated kinase 1B2178678946178751459Rat
1592022LOC365828similar to DJ-1 protein2178868474178869217Rat
61862Gria2glutamate ionotropic receptor AMPA type subunit 22179584302179704629Rat
4888540Mir2985microRNA 29852179591312179591421Rat
2706Glrbglycine receptor, beta2179768040179842612Rat
68410Pdgfcplatelet derived growth factor C2179952227180126897Rat
2322487LOC100360264tripartite motif-containing 59-like2180315808180316494Rat
1592021LOC365829similar to grancalcin2180800652180803316Rat
1589156Ctsocathepsin O2180857178180881677Rat
68370Tdo2tryptophan 2,3-dioxygenase2180897059180914919Rat
69295Asic5acid sensing ion channel subunit family member 52180935392180964365Rat
2769Gucy1b1guanylate cyclase 1 soluble subunit beta 12180976939181026001Rat
68436Gucy1a1guanylate cyclase 1 soluble subunit alpha 12181045694181103321Rat
11456971LOC108350044uncharacterized LOC1083500442181212408181224548Rat
11460842LOC108350196ATP synthase F(0) complex subunit C2, mitochondrial pseudogene2181292239181295641Rat
1593166LOC499644similar to heat shock protein 1, beta2181296061181299751Rat
1560368Map9microtubule-associated protein 92181331426181367245Rat
1585973LOC679616similar to heterogeneous nuclear ribonucleoprotein A32181398893181400355Rat
620475Npy2rneuropeptide Y receptor Y22181528949181538145Rat
11432237LOC10835019760S ribosomal protein L7a pseudogene2181570908181571422Rat
1585903LOC679686similar to Alpha-enolase (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1)2181655422181662679Rat
1584812LOC679729hypothetical protein LOC6797292181819796181820402Rat
1560205Rbm46RNA binding motif protein 462181828931181874223Rat
7591929LOC102555909uncharacterized LOC1025559092181874329181900539Rat
68362Lratlecithin retinol acyltransferase2181896304181905366Rat
7659008LOC102556113uncharacterized LOC1025561132181974182181979858Rat
2613Fggfibrinogen gamma chain2181987080181994523Rat
2603Fgafibrinogen alpha chain2181997562182013726Rat
2604Fgbfibrinogen beta chain2182028044182035026Rat
621047Plrg1pleiotropic regulator 12182040338182056669Rat
1563329Dchs2dachsous cadherin-related 22182112787182319003Rat
2321483LOC100360775BCL2/adenovirus E1B interacting protein 32182326041182332156Rat
7671171LOC102556330uncharacterized LOC1025563302182711753182713253Rat
11415819LOC108350198uncharacterized LOC1083501982182716671182752870Rat
735163Sfrp2secreted frizzled-related protein 22182723732182731277Rat
6503563LOC100909434protocadherin-16-like2182796272182799981Rat
7713747LOC102551394RING finger protein 175-like2182806670182829114Rat
735138Tlr2toll-like receptor 22182840171182846061Rat
1583677Tmem131ltransmembrane 131 like2182897332183031273Rat
9398746LOC103691595uncharacterized LOC1036915952182944563182955432Rat
9141577LOC103691596peflin pseudogene2183067302183069004Rat
1309007Mnd1meiotic nuclear divisions 12183073029183140768Rat
1310981Trim2tripartite motif-containing 22183145096183223819Rat
7593757LOC102550635uncharacterized LOC1025506352183230577183249162Rat
11365372LOC108350046uncharacterized LOC1083500462183271465183288246Rat
1311955Fhdc1FH2 domain containing 12183450608183487820Rat
7525273LOC102550864uncharacterized LOC1025508642183488993183497671Rat
9187168LOC103691597uncharacterized LOC1036915972183493313183497671Rat
708401Arfip1ADP-ribosylation factor interacting protein 12183503250183582798Rat
1305780Tigd4tigger transposable element derived 42183597570183601776Rat
1563262Tmem154transmembrane protein 1542183674361183714232Rat
11375706LOC108350047uncharacterized LOC1083500472183686266183689332Rat
7653266LOC102551030uncharacterized LOC1025510302183798012183805444Rat
7611669LOC102551095uncharacterized LOC1025510952183808108183811378Rat
7653667LOC102552233uncharacterized LOC1025522332183982024184000661Rat
7498945LOC102552298uncharacterized LOC1025522982184000972184002940Rat
7544419LOC102552358uncharacterized LOC1025523582184074396184079851Rat
7612486LOC102552432uncharacterized LOC1025524322184110909184144557Rat
11514812LOC108350048uncharacterized LOC1083500482184169472184179963Rat
2321145Fbxw7F-box and WD repeat domain containing 72184230191184309805Rat
1303105Deardual endothelin 1, angiotensin II receptor2184243976184247228Rat
9455736LOC103691602uncharacterized LOC1036916022184418061184425021Rat
9089372LOC103691600uncharacterized LOC1036916002184441483184449402Rat
7746019LOC102552980farnesyl pyrophosphate synthase-like2184459569184461385Rat
9121826LOC103691599uncharacterized LOC1036915992184502249184519377Rat
11376320LOC108350050uncharacterized LOC1083500502184534439184599505Rat
11516975LOC108350049uncharacterized LOC1083500492184538414184570458Rat
1307864Gatbglutamyl-tRNA amidotransferase subunit B2184600695184679980Rat
1565007Fhip1aFHF complex subunit HOOK interacting protein 1A2184684851184993350Rat
11484247LOC108348232uncharacterized LOC1083482322184816453184818545Rat
6499659LOC100910149uncharacterized LOC1009101492184817632184818507Rat
1590650LOC680510similar to 40S ribosomal protein S62184846853184847564Rat
9365434LOC103691612UDP-N-acetylglucosamine transferase subunit ALG13 homolog2185151717185160067Rat
11364935LOC10835005160S ribosomal protein L7a-like2185186545185189667Rat
1598350LOC295168hypothetical LOC2951682185260853185263557Rat
1304885Sh3d19SH3 domain containing 192185268028185431834Rat
11436036Prss48serine protease 482185286485185304588Rat
62078Rps3aribosomal protein S3a2185440477185444846Rat
9149530LOC103691613uncharacterized LOC1036916132185482702185515388Rat
1311428LrbaLPS responsive beige-like anchor protein2185590983186110491Rat
9390986LOC103691614alpha-enolase pseudogene2185804658185809103Rat
1595520Mab21l2mab-21 like 22185849749185852833Rat
1308384Dclk2doublecortin-like kinase 22186116624186245937Rat
2296Cd1d1CD1d1 molecule2186330298186333805Rat
1592019LOC365837similar to Multisynthetase complex auxiliary component p432186359416186361359Rat
7646363LOC102547749high mobility group protein B1-like2186398470186399544Rat
727883Kirrel1kirre like nephrin family adhesion molecule 12186420743186515209Rat
1306885Fcrl2Fc receptor-like 22186594442186605115Rat
1592018LOC365839similar to elongation protein 4 homolog2186630203186631703Rat
1308526Cd5lCd5 molecule-like2186685104186696117Rat
1589411Fcrl1Fc receptor-like 12186702311186724205Rat
11443353LOC108350053uncharacterized LOC1083500532186748906186764475Rat
1589379Fcrl5Fc receptor-like 52186776466186797900Rat
9131465LOC103691615Fc receptor-like protein 22186792420186794113Rat
9160266LOC103691633gamma-gliadin-like2186794518186794892Rat
1311577Etv3ETS variant transcription factor 32186872483186887294Rat
1562620Etv3lETS variant transcription factor 3 like2186899060186911913Rat
11362903LOC108350054uncharacterized LOC1083500542186908857186916668Rat
2319935LOC100361532hypothetical LOC1003615322186922821186924115Rat
1563314RGD1563314similar to phosphoglycerate mutase (EC 5.4.2.1) B chain - rat2186932296186933345Rat
1588194LOC680772similar to heterogeneous nuclear ribonucleoprotein F2186936999186938478Rat
7594981LOC102546356uncharacterized LOC1025463562186973941186979695Rat
619705Arhgef11Rho guanine nucleotide exchange factor 112186979850187102523Rat
1309453Lrrc71leucine rich repeat containing 712187101353187114005Rat
1305653Pear1platelet endothelial aggregation receptor 12187114219187134209Rat
620144Ntrk1neurotrophic receptor tyrosine kinase 12187143568187160373Rat
67399Insrrinsulin receptor-related receptor2187161817187181400Rat
1303076Sh2d2aSH2 domain containing 2A2187218851187225000Rat
1309037Prccproline rich mitotic checkpoint control factor2187232458187258140Rat
70961Hdgfheparin binding growth factor2187274898187284670Rat
1359289mrpl24mitochondrial ribosomal protein L242187288460187294676Rat
1311265Mettl25bmethyltransferase like 25B2187294052187302691Rat
1359413Isg20l2interferon stimulated exonuclease gene 20-like 22187302192187311677Rat
6490274LOC100911902cellular retinoic acid-binding protein 2-like2187321661187326794Rat
62070Crabp2cellular retinoic acid binding protein 22187322416187326794Rat
3162Nesnestin2187343109187352972Rat
2194Bcanbrevican2187359674187373133Rat
621854Hapln2hyaluronan and proteoglycan link protein 22187395104187402076Rat
1311086Gpatch4G patch domain containing 42187404731187424047Rat
1304699NaxeNAD(P)HX epimerase2187424319187426410Rat
2319887Ttc24tetratricopeptide repeat domain 242187426432187438482Rat
1305951Iqgap3IQ motif containing GTPase activating protein 32187447477187489630Rat
11433016LOC108350055uncharacterized LOC1083500552187500762187509219Rat
621489Mef2dmyocyte enhancer factor 2D2187511775187541285Rat
7658407LOC102547113uncharacterized LOC1025471132187564786187570731Rat
6489178LOC100911992uncharacterized LOC1009119922187573857187596346Rat
4888599Mir3597-1microRNA 3597-12187582790187582897Rat
2325603Mir9-1microRNA 9-12187582799187582887Rat
727813RhbgRh family B glycoprotein2187610081187622408Rat
9124566LOC103691617uncharacterized LOC1036916172187654122187657062Rat
1304953TsaccTSSK6 activating co-chaperone2187659103187668781Rat
735038Cct3chaperonin containing TCP1 subunit 32187669051187693610Rat
11515844LOC108350199ATP synthase subunit g, mitochondrial pseudogene2187693662187695364Rat
1303130Glmpglycosylated lysosomal membrane protein2187697528187701118Rat
1309886Tmem79transmembrane protein 792187701522187706452Rat
1584731Smg5SMG5 nonsense mediated mRNA decay factor2187708247187735355Rat
1584722Paqr6progestin and adipoQ receptor family member 62187736774187741696Rat
2206Bglapbone gamma-carboxyglutamate protein2187741770187748445Rat
9203311LOC103691618uncharacterized LOC1036916182187750660187752220Rat
1584694Pmf1polyamine-modulated factor 12187751770187771933Rat
1307244Slc25a44solute carrier family 25, member 442187772013187786829Rat
1304636Sema4asemaphorin 4A2187799568187823014Rat
620456Lmnalamin A/C2187842884187863552Rat
1564904Mex3amex-3 RNA binding family member A2187893678187902546Rat
1308447Rab25RAB25, member RAS oncogene family2187903301187909398Rat
1562501Lamtor2late endosomal/lysosomal adaptor, MAPK and MTOR activator 22187911530187914930Rat
1308273Ubqln4ubiquilin 42187915701187931035Rat
1308365Ssr2signal sequence receptor subunit 22187951316187960067Rat
1304659Arhgef2Rho/Rac guanine nucleotide exchange factor 22187964100188022847Rat
2322332Rxfp4relaxin family peptide/INSL5 receptor 42188026531188027685Rat
1565775Khdc4KH domain containing 4, pre-mRNA splicing factor2188051657188080280Rat
11455569LOC108350056uncharacterized LOC1083500562188064847188067079Rat
7720574LOC102556590uncharacterized LOC1025565902188068084188073599Rat
1559874Rit1Ras-like without CAAX 12188087486188099444Rat
62042Syt11synaptotagmin 112188112301188138180Rat
11456980LOC108350057uncharacterized LOC1083500572188136744188138815Rat
1564691Gon4lgon-4 like2188139730188212902Rat
1306110Msto1misato mitochondrial distribution and morphology regulator 12188212211188216482Rat
1305339Dap3death associated protein 32188225607188255324Rat
1306350Ash1lASH1 like histone lysine methyltransferase2188252592188389251Rat
11358634LOC108350157guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 pseudogene2188373990188375187Rat
2322139Rusc1RUN and SH3 domain containing 12188394114188403391Rat
68953Fdpsfarnesyl diphosphate synthase2188403595188413219Rat
3336Pklrpyruvate kinase L/R2188449158188458034Rat
620691Hcn3hyperpolarization-activated cyclic nucleotide-gated potassium channel 32188458851188471916Rat
1359711Clk2CDC-like kinase 22188476789188488809Rat
4888563Mir3541microRNA 35412188487004188487107Rat
68351Scamp3secretory carrier membrane protein 32188488907188495147Rat
1306107Fam189bfamily with sequence similarity 189, member B2188495237188501444Rat
7675361LOC102550011uncharacterized LOC1025500112188510207188511498Rat
1589149Gbaglucosylceramidase beta2188511781188522602Rat
1559791Mtx1Metaxin 12188522605188528747Rat
1596780Thbs3thrombospondin 32188528979188540738Rat
2325488Mir92bmicroRNA 92b2188541034188541116Rat
3122Muc1mucin 1, cell surface associated2188543137188547874Rat
1305993Trim46tripartite motif-containing 462188548608188561617Rat
1308413Krtcap2keratinocyte associated protein 22188561548188565544Rat
1561807Dpm3dolichyl-phosphate mannosyltransferase subunit 3, regulatory2188583664188584179Rat
1308478Slc50a1solute carrier family 50 member 12188585118188587498Rat
620388Efna1ephrin A12188588808188596156Rat
7747030LOC102550325uncharacterized LOC1025503252188600577188601934Rat
9305039LOC103691619uncharacterized LOC1036916192188624145188626941Rat
620390Efna3ephrin A32188636304188645302Rat
1307808Efna4ephrin A42188655920188660179Rat
620402Adam15ADAM metallopeptidase domain 152188661831188672337Rat
1307756Dcst1DC-STAMP domain containing 12188672549188690004Rat
1564557Dcst2DC-STAMP domain containing 22188689090188703367Rat
1305963Zbtb7bzinc finger and BTB domain containing 7B2188704989188719674Rat
1593292Flad1flavin adenine dinucleotide synthetase 12188726994188736462Rat
69433Leneplens epithelial protein2188727004188727670Rat
1561797Cks1bCDC28 protein kinase regulatory subunit 1B2188740564188745144Rat
620446Shc1SHC adaptor protein 12188745503188757066Rat
1308535Pygo2pygopus family PHD finger 22188757167188762285Rat
1305180Pbxip1PBX homeobox interacting protein 12188763887188776445Rat
1310812Pmvkphosphomevalonate kinase2188784329188793890Rat
2964Kcnn3potassium calcium-activated channel subfamily N member 32188837280188991794Rat
71099Adaradenosine deaminase, RNA-specific2189045551189085448Rat
2350Chrnb2cholinergic receptor nicotinic beta 2 subunit2189088570189096785Rat
1305305Ube2q1ubiquitin conjugating enzyme E2 Q12189106039189115110Rat
9278625LOC103691620uncharacterized LOC1036916202189139325189148261Rat
1583236LOC685066similar to Ferritin light chain 1 (Ferritin L subunit 1)2189157469189160663Rat
1583215SheSrc homology 2 domain containing E2189169691189194934Rat
2902Il6rinterleukin 6 receptor2189196180189255987Rat
11383061LOC108350271glyceraldehyde-3-phosphate dehydrogenase pseudogene2189266306189267311Rat
1597731Atp8b2ATPase phospholipid transporting 8B22189285961189306947Rat
1596307LOC686596similar to aquaporin 102189309151189314092Rat
727960Hax1HCLS1 associated protein X-12189330900189333305Rat
1308707Ubap2lubiquitin associated protein 2-like2189334341189400334Rat
9390987LOC103691621uncharacterized LOC1036916212189334963189336062Rat
1359625LOC361985similar to NICE-32189400696189413614Rat
1564171RGD1564171RGD15641712189413966189417000Rat
11363159LOC108350058uncharacterized LOC1083500582189417048189418787Rat
2325504Mir190bmicroRNA 190b2189421137189421214Rat
621546Tpm3tropomyosin 32189423534189451340Rat
1310250Nup210lnucleoporin 210-like2189453932189571918Rat
621045Rps27ribosomal protein S272189572175189573280Rat
620880Rab13RAB13, member RAS oncogene family2189581209189586358Rat
2942Jtbjumping translocation breakpoint2189591707189595926Rat
1359278Creb3l4cAMP responsive element binding protein 3-like 42189596657189602243Rat
1305241Slc39a1solute carrier family 39 member 12189609766189615367Rat
1308903Crtc2CREB regulated transcription coactivator 22189615928189625646Rat
1560320Dennd4bDENN domain containing 4B2189626922189642732Rat
7715390LOC102551157uncharacterized LOC1025511572189637655189654588Rat
1308533Gatad2bGATA zinc finger domain containing 2B2189654871189735056Rat
1310605Slc27a3solute carrier family 27 member 32189760747189765415Rat
1304593Ints3integrator complex subunit 32189766927189818327Rat
11482435LOC10835027240S ribosomal protein S23 pseudogene2189820691189821082Rat
2318933LOC100362048DC2 protein2189827360189835482Rat
3195Npr1natriuretic peptide receptor 12189840403189857032Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10574D2Mit191212182010087182010207Ratregion
10582D2Mit122392181990297181990540Ratregion
10583D2Wox171362181990399181990541Ratregion
10584D2Wox181402181987333181987474Ratregion
10585D2Arb122702181990331181990600Ratregion
10701D2Mgh172642181026142181026410Ratregion
10814D5Mgh71312187161600187161743Ratregion
11006D2Wox243032189854122189854424Ratregion
11108D2Wox191322188446935188447078Ratregion
11109D2Wox201742188448030188448205Ratregion
11110D2Wox211592188446928188447098Ratregion
11111D2Wox221502188448015188448166Ratregion
11112D2Arb151942188452453188452651Ratregion
33864D2Mit252432188836320188836568Ratregion
34292D2Mgh81152186611811186611918Ratregion
34693D2Mgh281432188452526188452665Ratregion
36091D2Rat441372188838511188838647Ratregion
36163D2Rat421272188013923188014049Ratregion
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5502969Pygo21152188760895188761009Ratregion
5503428UniSTS:5283511702187187308187188477Ratregion
5503428UniSTS:5283511702184864050184865219Ratregion
5507694Ilf17622176504035176504796Ratregion
5503843UniSTS:4718441422182730146182730287Ratregion
5504246AL0337921402188285611188285750Ratregion
5505103Muc102188545075188545963Ratregion
5505103Muc102188544901188545963Ratregion
5506013UniSTS:4972986332187347653187348285Ratregion
5506013UniSTS:4972986332184903634184904266Ratregion
5506049Fbxw73742184263190184263563Ratregion
5506248G160052522188844550188844801Ratregion
5506723G448331402173602191173602330Ratregion
5507077UniSTS:2243941632187359693187359855Ratregion
5507077UniSTS:2243941632184915677184915839Ratregion
5507157UniSTS:2248581782188561770188561947Ratregion
5507183UniSTS:2250591732188112986188113158Ratregion
5499803UniSTS:2347451902189766995189767184Ratregion
5499793UniSTS:2347172002186173490186173689Ratregion
5499797UniSTS:2347202342186424760186424993Ratregion
5499799UniSTS:2347311782188784173188784350Ratregion
5499801UniSTS:2347332792188636948188637226Ratregion
5500569RH1360401972188079359188079555Ratregion
5500623RH1363651902187959817187960006Ratregion
5500893SGC3017111162186264288186265403Ratregion
5501466D1S262E1122187530893187531004Ratregion
5501762MARC_11831-11832:1029348479:102187738226187739007Ratregion
5506380UniSTS:47906402189081662189083118Ratregion
5502218GDB:6330034102182011255182011664Ratregion
5506905G477181042189023790189023893Ratregion
5502423RH1248021102188021018188021127Ratregion
Position Markers

Flank 1: (D2Mco8)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22152,413,072 - 152,413,311 (-)MAPPER
Rnor_6.02172,795,683 - 172,795,921NCBI
Rnor_5.02192,132,537 - 192,132,775UniSTS
RGSC_v3.42158,146,823 - 158,147,062RGD
RGSC_v3.42158,146,824 - 158,147,062UniSTS
RGSC_v3.12158,096,786 - 158,097,025RGD
Celera2146,777,810 - 146,778,054UniSTS
Cytogenetic Map2q31UniSTS
Flank 2: (Npr1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22175,934,181 - 175,950,118 (-)NCBI
Rnor_6.0 Ensembl2189,840,403 - 189,856,090 (-)Ensembl
Rnor_6.02189,840,403 - 189,857,032 (-)NCBI
Rnor_5.02209,271,276 - 209,287,892 (-)NCBI
RGSC_v3.42182,724,916 - 182,740,242 (-)NCBI
RGSC_v3.12182,675,021 - 182,690,348 (-)NCBI
Celera2169,869,831 - 169,885,101 (-)NCBI
Cytogenetic Map2q34NCBI


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)216679272245624402Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)223837491218957222Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242776916195645082Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242776916217498710Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)243133606217498545Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243133606217498545Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243149788198704485Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246537589217498710Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256244671217498710Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828049217498710Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266828236243550655Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)275687495221880419Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278321410217498710Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)283754907237610852Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)283819608239166203Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)283819608243901375Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2116075644228737869Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2116075644228737869Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2118446646200453484Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2118446646200453484Rat
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2118446646227707979Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2118446793228582621Rat
1358360Sradr2Stress Responsive Adrenal Weight QTL 210.24adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)2133399373173020198Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2138901276217498710Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2140566078217498545Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2140566078217498545Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2140566078217498545Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)2140566078217498545Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2140566078217498545Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141583337217498710Rat
1581502Esta3Estrogen-induced thymic atrophy QTL 3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2142053350204585731Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2142053350228984665Rat
6907363Bp357Blood pressure QTL 3574.10.002arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2143447078188447078Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2147122993240020001Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2147122993240020001Rat
71113Cari2Carrageenan-induced inflammation QTL 22.70.009hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)2147522550217498710Rat
724568Uae13Urinary albumin excretion QTL 134.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)2149114878225501939Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2149614466205573168Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2149614466205573168Rat
6903312Bw112Body weight QTL 1123.20.0013body mass (VT:0001259)body weight (CMO:0000012)2149614623198704357Rat
631520Bp73Blood pressure QTL 730.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2153799203181987474Rat
1641925Alcrsp2Alcohol response QTL 2response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2155965557237742948Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2155965557254121739Rat
1598805Memor8Memory QTL 83exploratory behavior trait (VT:0010471)average horizontal distance in proximity to the target during voluntary locomotion in an experimental apparatus (CMO:0002674)2157914311204022555Rat
631501Bp101Blood pressure QTL 1012.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2157914409217498545Rat
1354609Niddm62Non-insulin dependent diabetes mellitus QTL 624.720.000006insulin secretion trait (VT:0003564)plasma insulin level (CMO:0000342)2158159186217498710Rat
2301966Bp322Blood pressure QTL 3223.58arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2158159186217498710Rat
61401Niddm2Non-insulin dependent diabetes mellitus QTL 24.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2159585731204585731Rat
1598833Bp295Blood pressure QTL 2953.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2161745602206745602Rat
1359032Hrtrt18Heart rate QTL 18heart pumping trait (VT:2000009)heart rate (CMO:0000002)2169852670207612467Rat
8662843Vetf9Vascular elastic tissue fragility QTL 92.05thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2169852670243026643Rat
1302793Bw16Body weight QTL 1650.0001body mass (VT:0001259)body weight (CMO:0000012)2169852800217498545Rat
2301415Cm67Cardiac mass QTL 670.003heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2172795683189857032Rat
11565180Kidm56Kidney mass QTL 560.003kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2172795683189857032Rat
11565181Bw176Body weight QTL 1760.002body mass (VT:0001259)body weight (CMO:0000012)2172795683189857032Rat
12879845Cm89Cardiac mass QTL 890.008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2172795683189857032Rat
12879846Cm90Cardiac mass QTL 900.011heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)2172795683189857032Rat
12879847Am4Aortic mass QTL 40.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2172795683189857032Rat
12879836Kidm61Kidney mass QTL 610.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2172795683199696953Rat
12879837Am2Aortic mass QTL 20.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2172795683199696953Rat
12879838Cm86Cardiac mass QTL 860.002heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2172795683199696953Rat
12879839Cm85Cardiac mass QTL 850.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2172795683199696953Rat
12879840Bw179Body weight QTL 1790.005body mass (VT:0001259)body weight (CMO:0000012)2172795683199696953Rat
7488925Bp364Blood pressure QTL 3640.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2174160958219160958Rat
1358356Srcrt1Stress Responsive Cort QTL13.66blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)2175403337239166203Rat
7488927Bp365Blood pressure QTL 3650.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2177339806222339806Rat
2306901Bp337Blood pressure QTL 3370.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2177680772243901375Rat
1598838Bp290Blood pressure QTL 2901.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2181522444226522444Rat
1549833Bp257Blood pressure QTL 2570.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2181987080199696953Rat
1331734Bp204Blood pressure QTL 2043.61192arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2181990297240020001Rat
7771603Bp371Blood pressure QTL 3710.00001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2183864092187196901Rat
7771605Memor19Memory QTL 190.00001exploratory behavior trait (VT:0010471)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)2183864092187196901Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2183984665228984665Rat
61469Bp16Blood pressure QTL 165.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2184730446229730446Rat
70162Bp63Blood pressure QTL 635.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2184730446229730446Rat
61473Bp19Blood pressure QTL 196.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2186611811189857032Rat
631522Bp74Blood pressure QTL 740.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2186611811198704485Rat
7488904Bp363Blood pressure QTL 3630.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2186889035189857032Rat
61457Niddm8Non-insulin dependent diabetes mellitus QTL 84.10.01blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)2188449158189857032Rat
2293084Iddm26Insulin dependent diabetes mellitus QTL 262.9blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2188838511228984665Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 9 gender: male 1599557
qtl_general also affects heart mass, heart right ventricle mass, aortic mass, kidney mass and body mass, but has no effect on blood pressure 1599557
qtl_map 25 Mb 1599557
qtl_statistics_details software package used: ANOVA followed by Dunnett test in the SYSTAT 9 program 1599557
qtl_trait_method measurement method: selected males were weaned at 21 days of age then fed 2% NaCl diet starting from 35 days of age, at 14 weeks animals were decapitated, organs removed, blotted and weighed 1599557
qtl_trait_method heart was dissected into left ventricle plus septum and right ventricle 1599557