Cm89 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Cm89 (Cardiac mass QTL 89) Rattus norvegicus

Symbol: Cm89
Name: Cardiac mass QTL 89
RGD ID: 12879845
Previously known as: CakmC2QTL
Trait: heart left ventricle mass   (VT:0007031)    
Measurement Type: heart left ventricle weight to body weight ratio   (CMO:0000530)    
LOD Score: Not Available
P Value: 0.008
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82154,723,085 - 178,247,591RGD_MAPPER_PIPELINE
mRatBN7.22152,413,072 - 175,950,118RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02172,795,683 - 189,857,032RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02192,132,537 - 209,287,892RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42158,146,823 - 182,740,242RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: SS.MNS-(D2Chm25-Fgg)/Ayd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Distinct quantitative trait loci for kidney, cardiac, and aortic mass dissociated from and associated with blood pressure in Dahl congenic rats. Duong C, etal., Mamm Genome. 2006 Dec;17(12):1147-61. Epub 2006 Dec 1.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1309962Schip1schwannomin interacting protein 12152127171152888587Rat
40969931LOC120101090uncharacterized LOC1201010902152898068152914616Rat
620562Il12ainterleukin 12A2152965769152973035Rat
2318708C2h3orf80similar to human chromosome 3 open reading frame 802153125312153128124Rat
1312006Ift80intraflagellar transport 802153144707153240024Rat
1306680Smc4structural maintenance of chromosomes 42153240243153268722Rat
7488977Mir15bmicroRNA 15b2153245200153245297Rat
7488974Mir16-2microRNA 16-22153245349153245443Rat
1311956Trim59tripartite motif-containing 592153269210153281185Rat
1311483Kpna4karyopherin subunit alpha 42153319380153381085Rat
41026718Scarna7small Cajal body-specific RNA 72153336855153337181Rat
41144596LOC120100841guanine nucleotide exchange factor MSS4-like2153400400153447089Rat
1585613Tox3l1TOX high mobility group box family member 3 like 12153400434153432771Rat
41110041LOC120100842uncharacterized LOC1201008422153446458153451173Rat
9465124Arl14ARF like GTPase 142153468863153470102Rat
1584541Ppp1r3b-ps2protein phosphatase 1, regulatory subunit 3b, pseudogene 22153515241153517672Rat
1305220Ppm1lprotein phosphatase, Mg2+/Mn2+ dependent, 1L2153566653153839434Rat
7507361Uba3-ps1ubiquitin-like modifier activating enzyme 3, pseudogene 12153688186153689472Rat
1304797B3galnt1beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)2153847297153877371Rat
1586221Atp6v1a-ps1ATPase H+ transporting V1 subunit A, pseudogene 12153928230153930479Rat
1586216Psat1-ps1phosphoserine aminotransferase 1, pseudogene 12153941139153942267Rat
1563620Rbbp4l1RB binding protein 4, chromatin remodeling factor like 12153958955153961336Rat
1308468Nmd3NMD3 ribosome export adaptor2154012973154038466Rat
2323879Nsa2-ps13NSA2 ribosome biogenesis factor, pseudogene 132154110052154110825Rat
2324614Sptssbserine palmitoyltransferase, small subunit B2154133728154162127Rat
41078558LOC120101308small nucleolar RNA SNORA172154248107154248230Rat
41081052LOC120101287small nucleolar RNA SNORA172154290338154290468Rat
1562064Otol1otolin 12154339612154349050Rat
11422776LOC10835019440S ribosomal protein S6 pseudogene2154371031154371755Rat
41359298LOC120101295small nucleolar RNA SNORA172154532746154532876Rat
1598353Gtpbp4-ps1GTP binding protein 4, pseudogene 12156546675156548532Rat
41066601Gapdh-ps86Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 862156666390156667038Rat
1592057Pgam1-ps10phosphoglycerate mutase 1, pseudogene 102156833501156834441Rat
41112298LOC120101151U6 spliceosomal RNA2157017711157017816Rat
1592028Brcc3-ps6BRCA1/BRCA2-containing complex, subunit 3, pseudogene 62157188589157189827Rat
11417335Rpl26l1-ps2ribosomal protein L26-like 1, pseudogene 22157417888157418324Rat
3675Sisucrase-isomaltase2157505893157586228Rat
1310506Slitrk3SLIT and NTRK-like family, member 32157680067157697404Rat
41283446Hspa8-ps26heat shock protein family A (Hsp70) member 8, pseudogene 262157871508157877151Rat
41026709LOC120101359small nucleolar RNA SNORA172157960235157960347Rat
41298404LOC120100845uncharacterized LOC1201008452158143645158146366Rat
41306099LOC120100846uncharacterized LOC1201008462158160787158205101Rat
41269007LOC120101213U7 small nuclear RNA2158203646158203712Rat
41211471LOC120101104U2 spliceosomal RNA2158228178158228357Rat
619996Bchebutyrylcholinesterase2158308674158401148Rat
41289266LOC120101112U2 spliceosomal RNA2158457866158457990Rat
41179135LOC120101119U2 spliceosomal RNA2159246741159246863Rat
41233978LOC120101354small nucleolar RNA SNORA172159592251159592348Rat
41346440Rnu2-60RNA, U2 small nuclear 602159679857159679938Rat
1592026Vdac1-ps7voltage-dependent anion channel 1, pseudogene 72159816998159817964Rat
1308632Zbbxzinc finger, B-box domain containing2159835257159946926Rat
40996652LOC120100849uncharacterized LOC1201008492159946958159952367Rat
619897Serpini2serpin family I member 22160014721160044271Rat
1564622Wdr49WD repeat domain 492160049478160264581Rat
1359329Pdcd10programmed cell death 102160303465160346086Rat
619896Serpini1serpin family I member 12160346403160433135Rat
41306397LOC120101338small nucleolar RNA SNORA172160504175160504308Rat
11487146LOC108350036uncharacterized LOC1083500362160521862160615536Rat
40982265Hnrnpa1-ps46heterogeneous nuclear ribonucleoprotein A1, pseudogene 462160544354160548500Rat
1310948Golim4golgi integral membrane protein 42160640837160733475Rat
7724888LOC102547227uncharacterized LOC1025472272160744561160801440Rat
1306858Fstl5follistatin-like 52160857989161526589Rat
1592025Ftsj3-ps1FtsJ RNA 2'-O-methyltransferase 3, pseudogene 12161603959161607297Rat
2323101Smarce1-ps2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 22161710363161721332Rat
11359479LOC108350038uncharacterized LOC1083500382161897170162008522Rat
40940488LOC120101353small nucleolar RNA SNORA172162010023162010134Rat
41083920LOC120101146U6 spliceosomal RNA2162350628162350735Rat
1592730Foxk2-ps1forkhead box K2, pseudogene 12162729046162730454Rat
41175324LOC120100851uncharacterized LOC1201008512162887090162892670Rat
1592024Vdac1-ps8voltage-dependent anion channel 1, pseudogene 82162904502162906649Rat
40957096LOC120101276small nucleolar RNA SNORA482163474553163474698Rat
9261171LOC103690241uncharacterized LOC1036902412163825887163931106Rat
1592056Hsp90ab1-ps8heat shock protein 90 alpha family class B member 1, pseudogene 82164034935164043754Rat
1591978Hsc70-ps1heat shock cognate protein 70, pseudogene 12164044226164046344Rat
2324841Tmem258l5transmembrane protein 258 like 52164047539164047778Rat
41110564LOC120101336small nucleolar RNA SNORA172164121936164122053Rat
1306434Rapgef2Rap guanine nucleotide exchange factor 22164207513164322157Rat
41163907LOC120101171U6 spliceosomal RNA2164345396164345502Rat
1566255Spmip2sperm microtubule inner protein 22164490247164604379Rat
1562174Fnip2folliculin interacting protein 22164596557164708147Rat
1303174Ppidpeptidylprolyl isomerase D2164727803164740168Rat
735052Etfdhelectron transfer flavoprotein dehydrogenase2164740547164762754Rat
1560010C2h4orf46similar to human chromosome 4 open reading frame 462164762994164766126Rat
1302973Rxfp1relaxin family peptide receptor 12164772270164893484Rat
11417312LOC108350043uncharacterized LOC1083500432164893497164925629Rat
1565845Tmem144transmembrane protein 1442164960649164993562Rat
41065219LOC120101206U6 spliceosomal RNA2164984137164984239Rat
40958504LOC120101205U6 spliceosomal RNA2164989889164989995Rat
7614516LOC102556854uncharacterized LOC1025568542164998076165001710Rat
735075Gask1bgolgi associated kinase 1B2165047689165112479Rat
1592022Park7-ps3Parkinsonism associated deglycase, pseudogene 32165232218165232961Rat
61862Gria2glutamate ionotropic receptor AMPA type subunit 22165949379166069510Rat
4888540Mir2985microRNA 29852165956389165956498Rat
40949523LOC120101253small nucleolar RNA SNORA92165980715165980847Rat
2706Glrbglycine receptor, beta2166134616166207498Rat
68410Pdgfcplatelet derived growth factor C2166316870166493449Rat
41009982Rnu7-62RNA, U7 small nuclear 622166343643166343704Rat
2322487Trim59-ps1tripartite motif-containing 59, pseudogene 12166680913166681664Rat
40998299Rnu1-83RNA, U1 small nuclear 832167040466167040629Rat
1592021Gcal1grancalcin like 12167170972167175290Rat
41014175LOC120101279small nucleolar RNA SNORA172167182553167182684Rat
1589156Ctsocathepsin O2167230407167254761Rat
68370Tdo2tryptophan 2,3-dioxygenase2167269581167287511Rat
41211607Rnu6-492RNA, U6 small nuclear 4922167273381167273487Rat
41137173LOC120101232small nucleolar RNA SNORD113/SNORD114 family2167273798167273878Rat
69295Asic5acid sensing ion channel subunit family member 52167307984167336812Rat
2769Gucy1b1guanylate cyclase 1 soluble subunit beta 12167348824167398983Rat
41176454LOC120101147U6 spliceosomal RNA2167403970167404076Rat
68436Gucy1a1guanylate cyclase 1 soluble subunit alpha 12167418615167482293Rat
1593166Hsp90ab1-ps17heat shock protein 90 alpha family class B member 1, pseudogene 172167676354167678386Rat
1560368Map9microtubule-associated protein 92167708661167743927Rat
1585973Hnrnpa1-ps51heterogeneous nuclear ribonucleoprotein A1, pseudogene 512167764388167765463Rat
620475Npy2rneuropeptide Y receptor Y22167901999167912165Rat
1585903Eno1-ps4enolase 1, pseudogene 42168034045168035481Rat
41123543Ppdpf-ps1pancreatic progenitor cell differentiation and proliferation factor, pseudogene 12168131170168184358Rat
1560205Rbm46RNA binding motif protein 462168198324168242011Rat
7591929LOC102555909uncharacterized LOC1025559092168241980168296943Rat
68362Lratlecithin retinol acyltransferase2168264093168273155Rat
2613Fggfibrinogen gamma chain2168354880168362325Rat
2603Fgafibrinogen alpha chain2168374120168381523Rat
2604Fgbfibrinogen beta chain2168394901168402863Rat
621047Plrg1pleiotropic regulator 12168408139168424470Rat
1563329Dchs2dachsous cadherin-related 22168478298168685802Rat
41121966LOC120100854uncharacterized LOC1201008542168532067168535512Rat
2321483Bnip3-ps8BCL2 interacting protein 3, pseudogene 82168690879168691540Rat
41353663LOC120100855uncharacterized LOC1201008552168817677168823182Rat
40976430LOC120100856uncharacterized LOC1201008562169001737169089302Rat
735163Sfrp2secreted frizzled-related protein 22169089517169097064Rat
735138Tlr2toll-like receptor 22169200620169206819Rat
1583677Tmem131ltransmembrane 131 like2169257659169391773Rat
9141577LOC103691596peflin pseudogene2169428603169429513Rat
1309007Mnd1meiotic nuclear divisions 12169433523169496081Rat
1310981Trim2tripartite motif-containing 22169500628169652855Rat
7593757LOC102550635uncharacterized LOC1025506352169572000169588946Rat
1311955Fhdc1FH2 domain containing 12169790917169829580Rat
41232349LOC120100858uncharacterized LOC1201008582169803931169806503Rat
708401Arfip1ARF interacting protein 12169843804169924136Rat
1305780Tigd4tigger transposable element derived 42169939105169942457Rat
1563262Tmem154transmembrane protein 1542170015247170054903Rat
2321145Fbxw7F-box and WD repeat domain containing 72170149706170311536Rat
1303105Deardual endothelin 1, angiotensin II receptor2170296930170300182Rat
11514812LOC108350048uncharacterized LOC1083500482170361754170362925Rat
7612486LOC102552432uncharacterized LOC1025524322170390448170457701Rat
7544419LOC102552358uncharacterized LOC1025523582170466538170468509Rat
7498945LOC102552298uncharacterized LOC1025522982170540147170542332Rat
7653667LOC102552233uncharacterized LOC1025522332170542421170561578Rat
9089372LOC103691600uncharacterized LOC1036916002170741284170781379Rat
9455736LOC103691602uncharacterized LOC1036916022170749182170756148Rat
7746019Fdps-ps3farnesyl diphosphate synthase, pseudogene 32170791328170794734Rat
9121826LOC103691599uncharacterized LOC1036915992170831712170849373Rat
11516975LOC108350049uncharacterized LOC1083500492170869965170900284Rat
1307864Gatbglutamyl-tRNA amidotransferase subunit B2170930547171017133Rat
1565007Fhip1aFHF complex subunit HOOK interacting protein 1A2171016951171265715Rat
9365434Alg13l-ps1ALG13, UDP-N-acetylglucosaminyltransferase subunit like, pseudogene 12171237400171256941Rat
11364935LOC10835005160S ribosomal protein L7a-like2171283328171303122Rat
1598350Cpsf3-ps1cleavage and polyadenylation specific factor 3, pseudogene 12171349626171352475Rat
1304885Sh3d19SH3 domain containing 192171356244171516042Rat
11436036Prss48serine protease 482171358946171387051Rat
62078Rps3aribosomal protein S3a2171524685171529054Rat
41361011Snord73asmall nucleolar RNA, C/D box 73A2171525510171525579Rat
41128133Snord73bsmall nucleolar RNA, C/D box U73B2171527196171527269Rat
1311428LrbaLPS responsive beige-like anchor protein2171623668172202576Rat
41069796LOC120101357small nucleolar RNA SNORA172171676727171676830Rat
1595520Mab21l2mab-21 like 22171946573171949655Rat
1308384Dclk2doublecortin-like kinase 22172202733172338411Rat
41303056LOC120101381U1 spliceosomal RNA2172347860172348023Rat
2296Cd1d1CD1d1 molecule2172423582172427089Rat
41039855Trnar-acgtransfer RNA arginine (anticodon ACG)2172432014172432094Rat
1592019Aimp1-ps3aminoacyl tRNA synthetase complex-interacting multifunctional protein 1, pseudogene 32172452808172453923Rat
41193345LOC120101301small nucleolar RNA SNORA172172509694172509822Rat
727883Kirrel1kirre like nephrin family adhesion molecule 12172521644172615057Rat
40929104LOC120101284small nucleolar RNA SNORA172172683386172683519Rat
1306885Fcrl2Fc receptor-like 22172694308172707261Rat
1592018Elp4-ps1elongator acetyltransferase complex subunit 4, pseudogene 12172729315172730773Rat
1308526Cd5lCd5 molecule-like2172791007172802018Rat
1589411Fcrl1Fc receptor-like 12172809442172829780Rat
11443353LOC108350053uncharacterized LOC1083500532172855048172864878Rat
1589379Fcrl5Fc receptor-like 52172881763172912912Rat
1311577Etv3ETS variant transcription factor 32172965461172980320Rat
1562620Etv3lETS variant transcription factor 3 like2172991616173004424Rat
2319935Cbx3-ps4chromobox 3, pseudogene 42173015332173016627Rat
1563314Pgam1-ps9phosphoglycerate mutase 1, pseudogene 92173024917173026131Rat
1588194Hnrnpf-ps2heterogeneous nuclear ribonucleoprotein F, pseudogene 22173029634173030956Rat
41353053LOC120101281small nucleolar RNA SNORA172173043652173043778Rat
7594981LOC102546356uncharacterized LOC1025463562173067942173074291Rat
619705Arhgef11Rho guanine nucleotide exchange factor 112173074383173195962Rat
1309453Lrrc71leucine rich repeat containing 712173194792173207448Rat
1305653Pear1platelet endothelial aggregation receptor 12173206298173234106Rat
620144Ntrk1neurotrophic receptor tyrosine kinase 12173236961173253806Rat
67399Insrrinsulin receptor-related receptor2173255335173274800Rat
1303076Sh2d2aSH2 domain containing 2A2173312253173318810Rat
1309037Prccproline rich mitotic checkpoint control factor2173326261173351799Rat
70961Hdgfheparin binding growth factor2173370147173379756Rat
1359289Mrpl24mitochondrial ribosomal protein L242173383062173389249Rat
1311265Mettl25bmethyltransferase like 25B2173388625173397279Rat
1359413Isg20l2interferon stimulated exonuclease gene 20-like 22173396780173407102Rat
62070Crabp2cellular retinoic acid binding protein 22173417004173421352Rat
3162Nesnestin2173437867173447777Rat
2194Bcanbrevican2173454479173467717Rat
621854Hapln2hyaluronan and proteoglycan link protein 22173488909173496824Rat
1311086Gpatch4G patch domain containing 42173499700173520346Rat
1304699NaxeNAD(P)HX epimerase2173518971173521036Rat
2319887Ttc24tetratricopeptide repeat domain 242173525204173533182Rat
1305951Iqgap3IQ motif containing GTPase activating protein 32173542151173583956Rat
11433016LOC108350055uncharacterized LOC1083500552173602194173605900Rat
621489Mef2dmyocyte enhancer factor 2D2173606054173635620Rat
7658407LOC102547113uncharacterized LOC1025471132173658487173665069Rat
6489178LOC100911992uncharacterized LOC1009119922173668490173691321Rat
4888599Mir3597-1microRNA 3597-12173677130173677237Rat
2325603Mir9-1microRNA 9-12173677139173677227Rat
727813RhbgRh family B glycoprotein2173704852173717380Rat
9124566LOC103691617uncharacterized LOC1036916172173750126173754472Rat
1304953TsaccTSSK6 activating co-chaperone2173755841173765564Rat
735038Cct3chaperonin containing TCP1 subunit 32173765701173790353Rat
41000064LOC120101251small nucleolar RNA SNORA2/SNORA34 family2173784077173784212Rat
11515844LOC108350199ATP synthase subunit g, mitochondrial pseudogene2173790405173792109Rat
1303130Glmpglycosylated lysosomal membrane protein2173794273173797863Rat
1309886Tmem79transmembrane protein 792173798267173803151Rat
1584731Smg5SMG5 nonsense mediated mRNA decay factor2173804987173832102Rat
1584722Paqr6progestin and adipoQ receptor family member 62173832241173838443Rat
2206Bglapbone gamma-carboxyglutamate protein2173838518173839495Rat
1584694Pmf1polyamine-modulated factor 12173848074173868272Rat
1307244Slc25a44solute carrier family 25, member 442173868317173883137Rat
1304636Sema4asemaphorin 4A2173896432173917903Rat
620456Lmnalamin A/C2173939751173960423Rat
41142855LOC120100862uncharacterized LOC1201008622173981078173984723Rat
1564904Mex3amex-3 RNA binding family member A2173990098173999567Rat
1308447Rab25RAB25, member RAS oncogene family2174000323174006422Rat
1562501Lamtor2late endosomal/lysosomal adaptor, MAPK and MTOR activator 22174008556174011950Rat
1308273Ubqln4ubiquilin 42174012726174028062Rat
1308365Ssr2signal sequence receptor subunit 22174048291174057043Rat
1304659Arhgef2Rho/Rac guanine nucleotide exchange factor 22174061126174118355Rat
41008005LOC120101166U6 spliceosomal RNA2174073652174073758Rat
2322332Rxfp4relaxin family peptide/INSL5 receptor 42174123510174124664Rat
1565775Khdc4KH domain containing 4, pre-mRNA splicing factor2174149059174177816Rat
41162707Scarna4small Cajal body-specific RNA 42174156951174157078Rat
41249606Rnu6-632RNA, U6 small nuclear 6322174157426174157535Rat
1559874Rit1Ras-like without CAAX 12174180742174195455Rat
62042Syt11synaptotagmin 112174206032174232540Rat
1564691Gon4lgon-4 like2174233461174306636Rat
1306110Msto1misato mitochondrial distribution and morphology regulator 12174305945174310230Rat
1305339Dap3death associated protein 32174319341174347489Rat
1306350Ash1lASH1 like histone lysine methyltransferase2174346267174483057Rat
11358634LOC108350157guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 pseudogene2174467792174469988Rat
2322139Rusc1RUN and SH3 domain containing 12174487921174497266Rat
68953Fdpsfarnesyl diphosphate synthase2174497402174507031Rat
40950497Rnu6-909RNA, U6 small nuclear 9092174502133174502239Rat
3336Pklrpyruvate kinase L/R2174543008174551863Rat
620691Hcn3hyperpolarization-activated cyclic nucleotide-gated potassium channel 32174551861174567459Rat
1359711Clk2CDC-like kinase 22174570614174582645Rat
4888563Mir3541microRNA 35412174580840174580943Rat
68351Scamp3secretory carrier membrane protein 32174583124174588984Rat
1306107Entrep3endosomal transmembrane epsin interactor 32174588984174595281Rat
7675361LOC102550011uncharacterized LOC1025500112174599894174604597Rat
1589149Gba1glucosylceramidase beta 12174609437174615457Rat
41067051Trnav-aac42transfer RNA valine (anticodon AAC) 422174610889174610963Rat
1559791Mtx1Metaxin 12174615460174621383Rat
1596780Thbs3thrombospondin 32174621788174633594Rat
2325488Mir92bmicroRNA 92b2174633890174633972Rat
3122Muc1mucin 1, cell surface associated2174635989174640738Rat
1305993Trim46tripartite motif-containing 462174641494174654237Rat
1308413Krtcap2keratinocyte associated protein 22174654409174658405Rat
1561807Dpm3dolichyl-phosphate mannosyltransferase subunit 3, regulatory2174676532174677047Rat
1308478Slc50a1solute carrier family 50 member 12174677985174680366Rat
620388Efna1ephrin A12174681676174689061Rat
7747030LOC102550325uncharacterized LOC1025503252174693445174694802Rat
9305039LOC103691619uncharacterized LOC1036916192174716573174720353Rat
41020132Trnav-aac41transfer RNA valine (anticodon AAC) 412174716936174717016Rat
620390Efna3ephrin A32174729192174738111Rat
1307808Efna4ephrin A42174748729174752979Rat
41325272LOC120100864uncharacterized LOC1201008642174749690174750817Rat
620402Adam15ADAM metallopeptidase domain 152174754629174765136Rat
1307756Dcst1DC-STAMP domain containing 12174765203174784023Rat
1564557Dcst2DC-STAMP domain containing 22174781806174795834Rat
1305963Zbtb7bzinc finger and BTB domain containing 7B2174795831174811980Rat
69433Leneplens epithelial protein2174819439174820127Rat
1593292Flad1flavin adenine dinucleotide synthetase 12174819451174828921Rat
1561797Cks1bCDC28 protein kinase regulatory subunit 1B2174833025174837614Rat
620446Shc1SHC adaptor protein 12174837937174849538Rat
1308535Pygo2pygopus family PHD finger 22174849670174854758Rat
1305180Pbxip1PBX homeobox interacting protein 12174856339174868922Rat
1310812Pmvkphosphomevalonate kinase2174876586174886365Rat
2964Kcnn3potassium calcium-activated channel subfamily N member 32174929846175088910Rat
71099Adaradenosine deaminase, RNA-specific2175138391175178280Rat
2350Chrnb2cholinergic receptor nicotinic beta 2 subunit2175181402175189619Rat
1305305Ube2q1ubiquitin conjugating enzyme E2 Q12175198793175209152Rat
9278625LOC103691620uncharacterized LOC1036916202175232139175252778Rat
1583215SheSrc homology 2 domain containing E2175262431175287807Rat
2902Il6rinterleukin 6 receptor2175289157175347719Rat
11383061LOC108350271glyceraldehyde-3-phosphate dehydrogenase pseudogene2175359162175361657Rat
1597731Atp8b2ATPase phospholipid transporting 8B22175378514175402265Rat
1596307Aqp10aquaporin 102175402609175407677Rat
40948032Rnvu1-15l1RNA, variant U1 small nuclear 15 like 12175406321175406484Rat
727960Hax1HCLS1 associated protein X-12175434242175437926Rat
9390987LOC103691621uncharacterized LOC1036916212175437744175446709Rat
1308707Ubap2lubiquitin associated protein 2-like2175438703175494085Rat
1359625Ns5atp4NS5A transactivated protein 42175494406175507281Rat
1564171Cfap141cilia and flagella associated protein 1412175507628175510662Rat
2325504Mir190bmicroRNA 190b2175514800175514877Rat
621546Tpm3tropomyosin 32175517198175545014Rat
1310250Nup210lnucleoporin 210-like2175545999175665332Rat
41172969Trnap-agg20transfer RNA proline (anticodon AGG) 202175551410175551490Rat
40986118Rnu6-278RNA, U6 small nuclear 2782175650981175651084Rat
621045Rps27ribosomal protein S272175665858175666963Rat
620880Rab13RAB13, member RAS oncogene family2175674894175680043Rat
2942Jtbjumping translocation breakpoint2175685392175689609Rat
1359278Creb3l4cAMP responsive element binding protein 3-like 42175690340175695846Rat
1305241Slc39a1solute carrier family 39 member 12175703413175709063Rat
1308903Crtc2CREB regulated transcription coactivator 22175709603175719768Rat
1560320Dennd4bDENN domain containing 4B2175720473175736425Rat
7715390LOC102551157uncharacterized LOC1025511572175730186175748446Rat
1308533Gatad2bGATA zinc finger domain containing 2B2175748594175829837Rat
1310605Slc27a3solute carrier family 27 member 32175853241175857909Rat
1304593Ints3integrator complex subunit 32175859421175911683Rat
11482435LOC10835027240S ribosomal protein S23 pseudogene2175914067175914445Rat
2318933Ostcl1oligosaccharyltransferase complex non-catalytic subunit like 12175920916175929256Rat
3195Npr1natriuretic peptide receptor 12175934181175950118Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10574D2Mit191212168377888168378009Ratregion
10582D2Mit122442168358098168358342Ratregion
10583D2Wox171432168358200168358343Ratregion
10584D2Wox181422168355132168355276Ratregion
10585D2Arb122702168358132168358402Ratregion
10701D2Mgh172692167399056167399325Ratregion
10814D5Mgh71442173254996173255140Ratregion
11006D2Wox243032175947534175947839Ratregion
11108D2Wox191322174540761174540907Ratregion
11109D2Wox201762174541858174542034Ratregion
11110D2Wox211712174540754174540927Ratregion
11111D2Wox221522174541843174541995Ratregion
11112D2Arb151992174546281174546480Ratregion
33864D2Mit252492174928764174929013Ratregion
33929D2Mit111342159380063159380197Ratregion
34292D2Mgh81082172710921172711029Ratregion
34693D2Mgh281432174546354174546494Ratregion
36091D2Rat441372174930955174931092Ratregion
36163D2Rat421272174110900174111027Ratregion
36213D2Rat401312157142078157142209Ratregion
37444D2Rat1622442170967158170967402Ratregion
35368D2Rat461662168559501168559667Ratregion
37186D2Rat1331952164552433164552628Ratregion
34849D2Rat811552163769336163769491Ratregion
34853D2Rat391662156922236156922402Ratregion
39784D2Rat2851992169603652169603847Ratregion
38068D2Rat1552042172982062172982266Ratregion
38088D2Rat1312212172710921172711135Ratregion
38720D2Rat1522502153526193153526443Ratregion
39988D2Rat2292262169937814169938040Ratregion
38872D2Rat971332160528970160529103Ratregion
38934D2Rat1492342167030905167031139Ratregion
38980D2Rat1302092172756209172756418Ratregion
39076D2Rat1701462161699179161699325Ratregion
39076D2Rat1701462161699179161699514Ratregion
39536D2Rat2272322175107255175107487Ratregion
42106D2Arb113422168377796168378138Ratregion
42291D2Rat3832082164130547164130755Ratregion
42292D2Rat3522082167282560167282768Ratregion
42601D2Rat2821042156748380156748484Ratregion
42603D2Rat3422222155153274155153496Ratregion
42604D2Rat3431202157592414157592534Ratregion
42604D2Rat3431202157592414157592674Ratregion
42605D2Rat3451862160825336160825522Ratregion
42606D2Rat3892322166250717166250950Ratregion
42607D2Rat3471412166314593166314736Ratregion
42608D2Rat3482312168691979168692210Ratregion
42610D2Rat3502362173678821173679057Ratregion
42611D2Rat3792182163192389163192607Ratregion
40898D2Rat2281342174403502174403646Ratregion
40954D2Rat2262462164073756164074002Ratregion
41696D2Rat2842072171329978171330185Ratregion
43544D2Got1131912155064563155064754Ratregion
43545D2Got1151192156922257156922376Ratregion
43546D2Got1141302159085268159085398Ratregion
43548D2Got1001912165767134165767325Ratregion
43555D2Got652482170701342170701590Ratregion
43556D2Got1852642170745231170745495Ratregion
60581D7Got551662171276719171276885Ratregion
60336D2Got632182170660843170661061Ratregion
60351D2Got872952170088944170089239Ratregion
60283D2Got1101742154002173154002347Ratregion
60284D2Got1111812154625420154625603Ratregion
60285D2Got1121422153718301153718443Ratregion
60286D2Got1162262156604317156604543Ratregion
629598D2Got711552175108354175108509Ratregion
62507D2Uia81562162261323162261480Ratregion
66390D2Mco452442173103977173104221Ratregion
66478D2Uia141562167325575167325731Ratregion
66534D2Mco71422152538025152538167Ratregion
66535D2Mco82392152413072152413311Ratregion
66654D2Mco142182152537946152538164Ratregion
66684D2Mco221692157869620157869789Ratregion
67311D2Arb142152173254993173255208Ratregion
67326D2Arb362122174507381174507593Ratregion
67335D2Arb432312158740987158741218Ratregion
67336D2Arb443912175935868175936259Ratregion
67336D2Arb443912175935868175936299Ratregion
67804D2Uwm211822165684470165684652Ratregion
1358018D2Chm242452166334196166334439Ratregion
1358028D2Chm252442166144095166144339Ratregion
1630295D2Wox391552169311580169311735Ratregion
1630977D2Wox582202174936981174937201Ratregion
1631423D2Got3391972160730425160730622Ratregion
1631446D2Got3881532173429774173429929Ratregion
1632051D2Got3862582170088942170089200Ratregion
1632092D2Got3361212163367435163367556Ratregion
1627166Gria22462166069260166069506Ratregion
1628161D2Ulb121462170546540170546686Ratregion
1628591D1Got3752312159225631159225862Ratregion
1628991D2Got3481342171366378171366512Ratregion
1629370D2Got3702422175846717175846959Ratregion
1638770D2Got3381642164468817164468981Ratregion
1639091D2Got3411722164132165164132337Ratregion
1639106D2Got3451872175219628175219817Ratregion
1632840D2Got3441362170889226170889362Ratregion
1632872D2Got3902952155258374155258664Ratregion
1633033D2Got3402672164640965164641232Ratregion
1640469D2Got343912169411730169411821Ratregion
1640555D2Ulb131772170546489170546666Ratregion
1640613D2Got3472852171608798171609083Ratregion
1635307D2Got3351762154625408154625586Ratregion
1635878D2Got3991392153574589153574728Ratregion
1637008D2Got3371522163087437163087591Ratregion
1638043D2Got4071382167928397167928535Ratregion
1638324D2Wox423402172423734172424074Ratregion
7206388G664434532152747067152747520Ratregion
7192217Muc115642174639085174640651Ratregion
7192220D2Wox161162168377888168378004Ratregion
7193133Efna11502174682349174682500Ratregion
9685058rs10566099302158903633158903633Ratregion
7193098AI0079681642174026953174027117Ratregion
7191228d2mit122452168358098168358343Ratregion
7205766D17S1446E4092152832101152832510Ratregion
7495817rs1068705532170201741170201741Ratregion
7495821rs640880072173290301173290301Ratregion
7206502UniSTS:54675113162174730094174731410Ratregion
5035981PMC34552P18982173838538173839436Ratregion
5038674AW8219532622153517257153517519Ratregion
5038744RH1273082052167269887167270092Ratregion
7206586Crtc202175718177175719708Ratregion
5036286AA0871242142173520285173520499Ratregion
5036288AA1663241342173446921173447055Ratregion
5039276RH1276132182168361936168362154Ratregion
5039286RH1276191872175298879175299066Ratregion
5036689AU0488832392169199344169199583Ratregion
5036939AU0496882242166804085166804309Ratregion
5035583Efna13052174682446174682751Ratregion
5035643D4S32311562170687042170687198Ratregion
5035645RH694901292174377577174377706Ratregion
5031358PMC151127P17822173838664173839446Ratregion
5025960RH1303602022173868466173868668Ratregion
7206196Shc12262174841506174842904Ratregion
5034105RH1413821892174117902174118091Ratregion
5034283RH1420561812153836142153836323Ratregion
5034347D17S187302172229616172229912Ratregion
5026518RH1325192062174819525174819731Ratregion
5032137RH945081262157506068157506194Ratregion
5034792AI4073971012165113952165114053Ratregion
5034834AA8939672062174595014174595220Ratregion
5026878RH1338732112174588734174588945Ratregion
5029547AI7108401962175177971175178167Ratregion
5032353AI8540141132175208806175208919Ratregion
5032581HSC0TF1121512153324291153324442Ratregion
5032775RH1352521942174760548174760742Ratregion
5032843RH1366982492166134642166134891Ratregion
5024978RH1269652052173242538173242743Ratregion
5027669Crabp23842173420231173420615Ratregion
5025220RH1274732112153926571153926781Ratregion
502783908.MMHAP42FLC2.seq1542170661439170661593Ratregion
502789525.MMHAP54FLA4.seq1542172174266172174420Ratregion
5030539AW5342161652153322298153322463Ratregion
5030543AW5343651192174488335174488454Ratregion
5033315RH1383851202173869680173869800Ratregion
5025388RH1281222052174678151174678434Ratregion
5025434RH1283012082173518997173519205Ratregion
5027977D1802602168395843168395968Ratregion
5027999L323721522165952542165952694Ratregion
5030627BI3013972072168770805168771012Ratregion
5030633BE1138511502174207141174207291Ratregion
5025596RH1289301572168380012168380169Ratregion
5025604RH1289611802164739652164739832Ratregion
5033599RH1394141222153447719153447841Ratregion
5033635RH1395481962153564324153564520Ratregion
5025754RH1295322032173790133173790336Ratregion
5025764RH1295701872173799722173799909Ratregion
5028366U859241702157869619157869789Ratregion
5030953BF3997282382170538554170538792Ratregion
5033697RH1397811902174754659174754849Ratregion
5025792RH1296802042173790132173790336Ratregion
5028416AA958940892168424306168424395Ratregion
5028418AA4082881712174487951174488122Ratregion
5053439RH1426491192164520206164520325Ratregion
5053753RH1428311462172967681172967827Ratregion
5056657RH1445041162175787369175787485Ratregion
5056775RH1445731772164055716164055893Ratregion
5057858BF3862711772175197518175197695Ratregion
5054963RH1435261162174854579174854695Ratregion
5055873RH1440522842173509518173509802Ratregion
5058812BI2846231822173208651173208833Ratregion
5056561RH1444491092172317383172317492Ratregion
5056415RH1443651932169201531169201724Ratregion
5052313U045411272175535863175535990Ratregion
5052426AU0416881572174582333174582490Ratregion
5058046BE1018781992169829825169830024Ratregion
5055373RH1437641092160733168160733277Ratregion
5058970BF3938912482174239885174240133Ratregion
5052829RH1422981622167349040167349202Ratregion
5052833RH1423001802167269979167270159Ratregion
5060030BF3883041532174221186174221339Ratregion
5058202BI2777115332173941924173942457Ratregion
5058438BE0960931762172178806172178982Ratregion
5053483RH1426751002172208714172208814Ratregion
5057580BE0956311792160654302160654481Ratregion
5050728RH1342242132174027564174027777Ratregion
5053889RH1429091022173421747173421849Ratregion
5051266RH1345351832174617921174618104Ratregion
5051350AV001013812164741620164741701Ratregion
5050638RH1341722092153269479153269688Ratregion
5053299RH1425682522169602894169603146Ratregion
5054699RH1433743202168396132168396452Ratregion
5054809RH1434381552164707484164707639Ratregion
5050838RH1342872162175723270175723486Ratregion
5050882RH1343132192160851088160851302Ratregion
5050912RH1343302162174117992174118208Ratregion
5051032RH1343981882174551207174551395Ratregion
5044216RH1304761812166493175166493356Ratregion
5040956RH1285802112173635231173635442Ratregion
5044392RH1305762172153145893153146110Ratregion
5044446RH1306071802158304408158304588Ratregion
5041426RH1288501872175287592175287779Ratregion
5041636RH1289712052174681741174681946Ratregion
5044018RH1303631912172801486172801677Ratregion
5046048RH1315282172173583586173583803Ratregion
5046060RH1315352132153847519153847732Ratregion
5048696RH1330532052175858449175858654Ratregion
5046314RH1316811852173518366173518551Ratregion
5046320RH1316851502169843805169843955Ratregion
5046400RH1317311842174193523174193707Ratregion
5044364RH1305601972174551638174551835Ratregion
5044948RH1308961932173831804173831997Ratregion
5046438RH1317531932174793017174793210Ratregion
5047504RH1323652012173206418173206619Ratregion
5046036RH1315212022165110846165111048Ratregion
5045770RH1313692172175690541175690758Ratregion
5046264RH1316532032164596774164596977Ratregion
5049300RH1334011832167349052167349235Ratregion
5045938RH1314662192173447453173447672Ratregion
5049120RH1332971812167418677167418858Ratregion
5048086RH1327001812172439681172439862Ratregion
5048130RH1327252062169257710169257916Ratregion
5049404RH1334611812172423703172423884Ratregion
5049404RH1334611812172423703172423991Ratregion
5048254RH1327971852175348766175348951Ratregion
5048316RH1328331942175934243175934437Ratregion
5049724RH1336452192169354504169354723Ratregion
5047196RH1321892072173664753173664960Ratregion
5047216RH1322002072153839100153839307Ratregion
5039382RH1276732022165112184165112386Ratregion
5039432RH1277021852175507014175507199Ratregion
5042056RH1292131532174177318174177471Ratregion
5047346RH1322741912173838177173838368Ratregion
5042702RH1295942042170781148170781352Ratregion
5040320RH1282151832168381230168381413Ratregion
5040330RH1282211902172730593172730783Ratregion
5040358RH1282371812174488052174488233Ratregion
5043056RH1298061562173799753173799909Ratregion
5040912RH1285551892164740672164740861Ratregion
5043760RH1302112012175689827175690028Ratregion
5040476RH1283051902168264370168264560Ratregion
5072028RH1354232372173848088173848325Ratregion
5072202RH1367121202157685193157685313Ratregion
5074114RH1378302302171522027171522257Ratregion
5075256RH1384891682172810403172810571Ratregion
5075280RH1385031272173454576173454703Ratregion
5075650RH1387171442173208529173208673Ratregion
5075742RH1387701722175827704175827876Ratregion
5076396RH1391511372173387761173387898Ratregion
5072810RH1370662002172152130172152330Ratregion
5074862RH1382612492174729354174729603Ratregion
5079406RH1409772052168395843168396049Ratregion
5077100RH1395601812160432695160432876Ratregion
5076402RH1391542082174151546174151754Ratregion
5078178RH1401892052173798323173798528Ratregion
5079732RH1411712012171515741171515942Ratregion
5078004RH1400861932172454003172454196Ratregion
5078536RH1404001712160432705160432876Ratregion
5079994RH1413211972173939759173939956Ratregion
5080020RH1413371962173641701173641897Ratregion
5080102RH1413841712174615404174615575Ratregion
5080178RH1414301982172855151172856415Ratregion
5079046RH1407039572167367758167368715Ratregion
5072904RH1371211942174615528174615722Ratregion
5072960RH1371532092168361582168361791Ratregion
5070958RH1348041892175679708175679897Ratregion
5080392RH1415532132175178329175178542Ratregion
5073546RH1374992022155929460155929662Ratregion
5073708RH1375921652167253681167253846Ratregion
5073778RH1376331472152500287152500434Ratregion
5070778RH1347001832174306240174306423Ratregion
5071666RH1352142172173769826173770043Ratregion
5071744RH1352591992174797632174797831Ratregion
5073860RH1376801242174363873174363997Ratregion
5072198RH1367091372159835709159835846Ratregion
5072290RH1367632372175510455175510692Ratregion
5061686BE1058641552174552112174552267Ratregion
5063386BF3988371792174356500174356679Ratregion
5063448BI3018091512165005435165005586Ratregion
5065068BF4056181642160733647160733811Ratregion
5067052AU0479941552174639799174639956Ratregion
5067252AU0478692532168919023168919278Ratregion
5067278AU0478521482170889225170889373Ratregion
5067424AU0477572832169603573169603852Ratregion
5067744AU0475621322163116876163117005Ratregion
5068250AU0472591812167905855167906036Ratregion
5068702AU0469852572154880884154881141Ratregion
5069948AU0291421412173976732173976873Ratregion
5068866AU0468771392154425202154425336Ratregion
5070123RH944861692174550715174550884Ratregion
5069562AU0464131362169007092169007228Ratregion
5069562AU0464131362169007120169007228Ratregion
5069766AU0289711262156552464156552590Ratregion
5060350AW5315121882158308390158308578Ratregion
5063510BF3989871642174356515174356679Ratregion
5063620BE1078651842153587391153587575Ratregion
5060380AW5319562052171418287171418492Ratregion
5060420BE1100151722169744409169744581Ratregion
5060650BE1107281502170146636170146786Ratregion
5062370BF3978201742153721629153721803Ratregion
5064020BI2960262052173325044173325249Ratregion
5065680BF4061802092153123888153124097Ratregion
5060744BF3890721812173430013173430194Ratregion
5064298AW5299571752175542718175542893Ratregion
5065864AI0459161922173388754173388946Ratregion
5065920AA9648481002175176904175177004Ratregion
5065314BE1214091512174927028174927179Ratregion
5065528AA9245551842153324319153324503Ratregion
5065830BF4066761322154161976154162108Ratregion
5062602BE1069231672164728089164728256Ratregion
5065986BE1164042132163724402163724615Ratregion
5062946BI2890891072173194055173194162Ratregion
5064478BF3992961622170821852170822014Ratregion
5064572BF399371922171402748171402840Ratregion
5061220BI2934761932173880869173881062Ratregion
5063028BF3982611372172208889172209026Ratregion
5063094BE1071171652173687985173688150Ratregion
5064688BE1083211642173982982173983146Ratregion
5066362PMC164293P32032172527567172527770Ratregion
5061414BF3963701632172557536172557699Ratregion
5064838AA9239801112174195279174195390Ratregion
5066578AU0482742012170002362170002563Ratregion
5061522BE1053962052170540161170540366Ratregion
5086937BF4019361042169256418169256522Ratregion
5082581BE1197941632169838052169838215Ratregion
5082733AW5208221892174854500174854689Ratregion
5082787BI2810891732154134001154134174Ratregion
5087331BQ1939111592174486692174486851Ratregion
5087532PMC283538P15812165972008165972589Ratregion
5089077AU0489412792172383973172384252Ratregion
5089813AU0493782432172569537172569780Ratregion
5083669BG3815311182174618287174618405Ratregion
5083687BI2768031592164599066164599225Ratregion
5088865AU0488161702162423422162423592Ratregion
5089661AU0492881202154884362154884482Ratregion
5084020AI4081871662172805233172805399Ratregion
5081597BF4206821002174286758174286858Ratregion
5087586PMC34552P24932173838538173839031Ratregion
5084914AI2367061862175086614175086800Ratregion
5080950RH1418772062153928241153928447Ratregion
5080950RH1418772062153928241153928447Ratregion
5085699AI1767831642175285138175285302Ratregion
5085914BM3844201782166403059166403237Ratregion
5080840RH1418131892171514347171514536Ratregion
5084536AI170339962152744073152744169Ratregion
5081158RH1419981952169096834169097029Ratregion
5084738AI1033121802169501362169501542Ratregion
5084976AI4125431422170831953170832095Ratregion
5085127BM3897642142175330189175330403Ratregion
5081446AI5553982122172521786172521998Ratregion
5085254BE0965241642174869442174869606Ratregion
5081961BG3724361202160737190160737310Ratregion
5085784BF3881051812175181080175181261Ratregion
5085856BE1028081742174192957174193131Ratregion
5083863AI4065802312171515186171515417Ratregion
5502969Pygo21152174853367174853482Ratregion
5503428UniSTS:5283511702173280707173281877Ratregion
5507694Ilf17622162729467162730229Ratregion
5503843UniSTS:4718441422169095932169096074Ratregion
5504246AL0337921412174379352174379492Ratregion
5505354Atp6v1a1472153929233153929380Ratregion
5505103Muc102174637758174638821Ratregion
5505103Muc102174637932174638821Ratregion
5506013UniSTS:4972986332173442457173443090Ratregion
5506049Fbxw73742170283174170283548Ratregion
5506248G160052522174937074174937326Ratregion
5506723G448331402159983749159983889Ratregion
5507077UniSTS:2243941632173454497173454660Ratregion
5507157UniSTS:2248581782174654630174654808Ratregion
5507183UniSTS:2250591742174206716174206889Ratregion
5499803UniSTS:2347451902175859488175859678Ratregion
5500206G670204952157411850157412345Ratregion
5500400GDB:4515321042153325710153325814Ratregion
5499793UniSTS:2347172002172265270172265470Ratregion
5499797UniSTS:2347202342172525660172525894Ratregion
5499799UniSTS:2347311782174876649174876827Ratregion
5499801UniSTS:2347332792174729835174730114Ratregion
5500569RH1360401972174176590174176787Ratregion
5500623RH1363651912174056792174056982Ratregion
5500893SGC3017111162172356768172357884Ratregion
5501305D19S4174542163636589163637043Ratregion
5501466D1S262E1122173625227173625339Ratregion
5505201FCA140412062153299424153300630Ratregion
5501762MARC_11831-11832:1029348479:17822173834972173835754Ratregion
5506380UniSTS:47906402175174493175175950Ratregion
5502218GDB:6330034102168379056168379466Ratregion
5506725G447602462152775630152775876Ratregion
5506905G477181042175116340175116444Ratregion
5502423RH1248021102174117995174118105Ratregion
5502891Kpna49112153324403153325314Ratregion
152025198rs1345733502169504100169504100Ratregion
Position Markers

Flank 1: (D2Mco8)
Rat AssemblyChrPosition (strand)Source
GRCr82154,723,085 - 154,723,324 (+)Marker Load Pipeline
mRatBN7.22152,413,072 - 152,413,311 (-)MAPPER
Rnor_6.02172,795,683 - 172,795,921NCBI
Rnor_5.02192,132,537 - 192,132,775UniSTS
RGSC_v3.42158,146,823 - 158,147,062RGD
RGSC_v3.42158,146,824 - 158,147,062UniSTS
RGSC_v3.12158,096,786 - 158,097,025RGD
Celera2146,777,810 - 146,778,054UniSTS
Cytogenetic Map2q31UniSTS
Flank 2: (Npr1)
Rat AssemblyChrPosition (strand)Source
GRCr82178,231,766 - 178,247,591 (-)NCBI
mRatBN7.22175,934,181 - 175,950,118 (-)NCBI
mRatBN7.2 Ensembl2175,934,181 - 175,949,505 (-)Ensembl
UTH_Rnor_SHR_Utx2183,074,109 - 183,089,476 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.02181,096,360 - 181,111,730 (-)NCBI
UTH_Rnor_WKY_Bbb_1.02175,696,310 - 175,711,670 (-)NCBI
Rnor_6.02189,840,403 - 189,857,032 (-)NCBI
Rnor_6.0 Ensembl2189,840,403 - 189,856,090 (-)Ensembl
Rnor_5.02209,271,276 - 209,287,892 (-)NCBI
RGSC_v3.42182,724,916 - 182,740,242 (-)NCBI
RGSC_v3.12182,675,021 - 182,690,348 (-)NCBI
Celera2169,869,831 - 169,885,101 (-)NCBI
Cytogenetic Map2q34NCBI


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1358356Srcrt1Stress Responsive Cort QTL13.66blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)2161699179222436696Rat
1331734Bp204Blood pressure QTL 2043.61192arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168358098223265385Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
6907363Bp357Blood pressure QTL 3574.10.002arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2129540907174540907Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2136445150202447032Rat
61457Niddm8Non-insulin dependent diabetes mellitus QTL 84.10.01blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)2174543008175950118Rat
152025245Scl81Serum cholesterol level QTL 813.49blood cholesterol amount (VT:0000180)2122609194206936711Rat
70162Bp63Blood pressure QTL 635.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2114837675212549332Rat
12879836Kidm61Kidney mass QTL 610.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2152413072185122374Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
10043136Iddm54Insulin dependent diabetes mellitus QTL 543.40.0001blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)2143657411190602963Rat
12879837Am2Aortic mass QTL 20.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2152413072185122374Rat
12879838Cm86Cardiac mass QTL 860.002heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2152413072185122374Rat
1302793Bw16Body weight QTL 1650.0001body mass (VT:0001259)body weight (CMO:0000012)2157142209202446871Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
12879839Cm85Cardiac mass QTL 850.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2152413072185122374Rat
61469Bp16Blood pressure QTL 165.64arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)2169745596214745596Rat
70175BpQTLCluster3Blood pressure QTL cluster 34.128arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)2135552573202446871Rat
1549833Bp257Blood pressure QTL 2570.003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168354880185122374Rat
1358900Bw48Body weight QTL 484.88body mass (VT:0001259)body weight (CMO:0000012)2157142078211086598Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
12879845Cm89Cardiac mass QTL 890.008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)2152413072175950118Rat
61473Bp19Blood pressure QTL 196.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2172710921175950118Rat
1359030Bp277Blood pressure QTL 277arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2114837527185876470Rat
12879846Cm90Cardiac mass QTL 900.011heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)2152413072175950118Rat
12879847Am4Aortic mass QTL 40.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)2152413072175950118Rat
7771605Memor19Memory QTL 190.00001exploratory behavior trait (VT:0010471)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)2170201741173290301Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
12879840Bw179Body weight QTL 1790.005body mass (VT:0001259)body weight (CMO:0000012)2152413072185122374Rat
7771603Bp371Blood pressure QTL 3710.00001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2170201741173290301Rat
1581502Esta3Estrogen-induced thymic atrophy QTL 3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2136916935189599348Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1582257Gluco21Glucose level QTL 213.10.0035blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2118111229157142209Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
1359032Hrtrt18Heart rate QTL 18heart pumping trait (VT:2000009)heart rate (CMO:0000002)2157142078192625452Rat
2301966Bp322Blood pressure QTL 3223.58arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150540301202447032Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)281689826221035911Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2136916935213594495Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561249053267Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat
8662843Vetf9Vascular elastic tissue fragility QTL 92.05thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2157142078226277316Rat
631501Bp101Blood pressure QTL 1012.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2150341684202446871Rat
2301415Cm67Cardiac mass QTL 670.003heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)2152413072175950118Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2168594495213594495Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141194931223265385Rat
71113Cari2Carrageenan-induced inflammation QTL 22.70.009hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)2141596551202447032Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2141194931223265385Rat
11565180Kidm56Kidney mass QTL 560.003kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2152413072175950118Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2112456140212696837Rat
1598805Memor8Memory QTL 83exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)2150341585189039377Rat
11565181Bw176Body weight QTL 1760.002body mass (VT:0001259)body weight (CMO:0000012)2152413072175950118Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
724568Uae13Urinary albumin excretion QTL 134.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)2143157029210020885Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2133914684202447032Rat
61401Niddm2Non-insulin dependent diabetes mellitus QTL 24.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2144599348189599348Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2112456140212696837Rat
738007Anxrr7Anxiety related response QTL 74.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2118189491163189491Rat
1641925Alcrsp2Alcohol response QTL 2response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561221167075Rat
1354609Niddm62Non-insulin dependent diabetes mellitus QTL 624.720.000006insulin secretion trait (VT:0003564)plasma insulin level (CMO:0000342)2150540301202447032Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
631520Bp73Blood pressure QTL 730.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2147686913168355276Rat
1598833Bp295Blood pressure QTL 2953.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2147798556192798556Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)272532993157142209Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)281754530222436696Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
631522Bp74Blood pressure QTL 740.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2172710921184114403Rat
7488927Bp365Blood pressure QTL 3650.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2162765032207765032Rat
1598838Bp290Blood pressure QTL 2901.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2166539266211539266Rat
7488925Bp364Blood pressure QTL 3640.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2160564068205564068Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
1354594Despr10Despair related QTL 102e-06locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)2114654253159654253Rat
2306901Bp337Blood pressure QTL 3370.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2164073756227146641Rat
152025206Hrtrt23Heart rate QTL 235.98heart pumping trait (VT:2000009)228484589169504100Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
6903312Bw112Body weight QTL 1123.20.0013body mass (VT:0001259)body weight (CMO:0000012)2143657569184114274Rat
7488904Bp363Blood pressure QTL 3630.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2172982062175950118Rat
152025204Hrtrt22Heart rate QTL 225.6heart pumping trait (VT:2000009)228484589169504100Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
2293084Iddm26Insulin dependent diabetes mellitus QTL 262.9blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2174930955213594495Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 9 gender: male 1599557
qtl_general also affects heart mass, heart right ventricle mass, aortic mass, kidney mass and body mass, but has no effect on blood pressure 1599557
qtl_map 25 Mb 1599557
qtl_statistics_details software package used: ANOVA followed by Dunnett test in the SYSTAT 9 program 1599557
qtl_trait_method measurement method: selected males were weaned at 21 days of age then fed 2% NaCl diet starting from 35 days of age, at 14 weeks animals were decapitated, organs removed, blotted and weighed 1599557
qtl_trait_method heart was dissected into left ventricle plus septum and right ventricle 1599557