Txk (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 35,817,270 - 35,873,454 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 35,463,369 - 35,519,448 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 35,463,944 - 35,519,448 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 35,828,243 - 35,884,548 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 37,132,987 - 37,189,292 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 35,621,349 - 35,677,656 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 38,029,809 - 38,085,822 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 38,030,189 - 38,085,919 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 37,840,106 - 37,896,117 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 37,867,565 - 37,923,075 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 37,870,891 - 37,926,425 (+) | NCBI | | | | | Celera | 14 | 34,718,226 - 34,773,309 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | p11 | NCBI | | | | |
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TXK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 48,066,393 - 48,134,250 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 48,063,158 - 48,134,250 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 48,068,410 - 48,136,267 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 47,763,167 - 47,831,030 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 47,909,688 - 47,977,201 | NCBI | | | | | Celera | 4 | 48,517,268 - 48,584,988 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | p12 | NCBI | | | | | HuRef | 4 | 47,388,494 - 47,456,038 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 48,067,554 - 48,135,380 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 48,033,459 - 48,101,082 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Txk (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 72,853,321 - 72,910,337 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 72,853,321 - 72,910,120 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 72,695,978 - 72,752,992 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 72,695,978 - 72,752,777 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 73,087,217 - 73,144,012 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 72,975,117 - 73,015,737 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 69,944,742 - 70,002,864 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | C3.2 | NCBI | | | | | cM Map | 5 | 38.44 | NCBI | | | | |
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Txk (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955443 | 474,099 - 556,697 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955443 | 474,099 - 556,697 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TXK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 79,730,977 - 79,801,494 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 79,992,362 - 80,063,009 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 74,039,292 - 74,086,744 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 84,750,804 - 84,818,671 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 84,750,804 - 84,818,671 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TXK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 13 | 43,911,881 - 43,977,499 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 43,914,534 - 43,976,655 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 43,865,388 - 43,929,029 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 44,512,768 - 44,576,339 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 44,514,039 - 44,576,331 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 44,190,147 - 44,253,820 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 43,722,001 - 43,785,908 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 44,605,279 - 44,668,806 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Txk (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405285 | 32,066,522 - 32,108,331 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936482 | 14,190,409 - 14,245,943 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936482 | 14,190,409 - 14,231,690 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TXK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 37,977,986 - 38,046,933 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 37,977,222 - 38,047,876 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 40,028,569 - 40,096,747 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TXK (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 27 | 2,120,429 - 2,186,950 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 27 | 2,140,685 - 2,190,398 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 48,133,664 - 48,203,278 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Txk (Heterocephalus glaber - naked mole-rat) |
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