Gene: Atp11c (ATPase phospholipid transporting 11C) Rattus norvegicus
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Symbol: Atp11c
Name: ATPase phospholipid transporting 11C
Description: Predicted to have phospholipid-translocating ATPase activity; predicted to be involved in phospholipid translocation, positive regulation of B cell differentiation, and pre-B cell differentiation; predicted to localize to the cytoplasm, intracellular organelle, and plasma membrane; orthologous to human ATP11C (ATPase phospholipid transporting 11C); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Atp11c-ps1; ATPase, class VI, type 11C; ATPase, class VI, type 11C, pseudogene 1; LOC317599; phospholipid-transporting ATPase IG; RGD1564481; similar to ATPase, Class VI, type 11C isoform a
Orthologs:
Homo sapiens (human) : ATP11C (ATPase phospholipid transporting 11C)  HGNC  Alliance
Mus musculus (house mouse) : Atp11c (ATPase, class VI, type 11C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp11c (ATPase phospholipid transporting 11C)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP11C (ATPase phospholipid transporting 11C)
Canis lupus familiaris (dog) : ATP11C (ATPase phospholipid transporting 11C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp11c (ATPase phospholipid transporting 11C)
Sus scrofa (pig) : ATP11C (ATPase phospholipid transporting 11C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X143,340,712 - 143,525,588 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X143,369,601 - 143,554,166 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X145,746,536 - 145,861,055 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX134,637,343 - 134,750,541 (-)NCBICelera
Cytogenetic MapXq36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp11c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564481
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.