Memor15 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Memor15 (Memory QTL 15) Rattus norvegicus

Symbol: Memor15
Name: Memory QTL 15
RGD ID: 1598809
Also known as: SR-3
Trait: exploratory behavior trait   (VT:0010471)    
Measurement Type: difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase   (CMO:0002678)    
LOD Score: 4.4
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X103,312,877 - 148,312,877RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0X110,957,467 - 155,957,467RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0X122,686,596 - 144,384,190RGDRnor5.0
RGSC_v3.4X9,007,287 - 160,699,376RGDRGSC3.4
RGSC_v3.1X9,012,843 - 160,775,580RGD
Cross Type: intercross
Strains Crossed: SR/JrHsd SS/JrHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain
SR/JrHsd  (IEA)
SS/JrHsd  (IEA)

References

References - curated
1. Ruiz-Opazo N and Tonkiss J, Physiol Genomics. 2006 Jul 12;26(2):145-51.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3295Rhox5Rhox homeobox family member 5X116536207116541972Rat
61955Prps1phosphoribosyl pyrophosphate synthetase 1X104132139104154191Rat
2848Htr2c5-hydroxytryptamine receptor 2CX110640777110870288Rat
70890Pgrmc1progesterone receptor membrane component 1X115832865115841060Rat
2826Hprt1hypoxanthine phosphoribosyltransferase 1X132736175132768149Rat
69401Acsl4acyl-CoA synthetase long-chain family member 4X105942794106006573Rat
3593Rpl39ribosomal protein L39X116327183116330211Rat
70958Gria3glutamate ionotropic receptor AMPA type subunit 3X120238515120504106Rat
631402Igsf1immunoglobulin superfamily, member 1X129069891129085331Rat
727927Lhfpl1LHFPL tetraspan subfamily member 1X108815596108873460Rat
621277Xpnpep2X-prolyl aminopeptidase 2X127287765127317036Rat
708510Akap14A-kinase anchoring protein 14X116395512116410697Rat
620692XiapX-linked inhibitor of apoptosisX120890537120938413Rat
727808Gpr119G protein-coupled receptor 119X127852145127858198Rat
708418Cd40lgCD40 ligandX135127119135138302Rat
620164Fgf13fibroblast growth factor 13X137276498137800056Rat
621654Tsc22d3TSC22 domain family, member 3X104217898104277935Rat
2990Lamp2lysosomal-associated membrane protein 2X117173097117222090Rat
628741Il13ra1interleukin 13 receptor subunit alpha 1X115348860115408682Rat
620994Atp1b4ATPase Na+/K+ transporting family member beta 4X117087284117108023Rat
727965Wdr44WD repeat domain 44X114481890114587307Rat
620439Gucy2fguanylate cyclase 2FX105710356105808183Rat
621433Slc25a14solute carrier family 25 member 14X127807630127845823Rat
2072Agtr2angiotensin II receptor, type 2X112119673112124060Rat
628645Brs3bombesin receptor subtype 3X134906817134932321Rat
619787Trpc5transient receptor potential cation channel, subfamily C, member 5X107946163108230978Rat
735215Chrdl1chordin-like 1X106889125106992937Rat
620817Aifm1apoptosis inducing factor, mitochondria associated 1X127650223127689356Rat
2589F9coagulation factor IXX138352334138396835Rat
2615Fhl1four and a half LIM domains 1X134555399134614930Rat
620350Psmd10proteasome 26S subunit, non-ATPase 10X104656809104665126Rat
620838Il13ra2interleukin 13 receptor subunit alpha 2X111002590111074053Rat
620670DcxdoublecortinX107430767107573612Rat
70960Capn6calpain 6X107380774107405489Rat
3251Pak3p21 (RAC1) activated kinase 3X107116308107374342Rat
2623Fmr1FMRP translational regulator 1X147240239147278057Rat
620353Slc25a5solute carrier family 25 member 5X116031896116034963Rat
1305365Tesltestis derived transcript-likeX114680227114693795Rat
2725Gpc3glypican 3X131868983132236837Rat
621409Pls3plastin 3X111589193111683908Rat
727788Tmem255atransmembrane protein 255AX116970793117035008Rat
1333338Olr1752-psolfactory receptor pseudogene 1752X110437444110437620Rat
1332660Olr1764-psolfactory receptor pseudogene 1764X128992854128993813Rat
1332669Olr1766olfactory receptor 1766X129169388129170320Rat
1560456Ct55cancer/testis antigen 55X133502545133515730Rat
1560585RGD1560585similar to RIKEN cDNA 1700001F22X139274749139275452Rat
1559646Klhl13kelch-like family member 13X113942309114107355Rat
620672AplnapelinX127180801127213567Rat
1333608Olr1751olfactory receptor 1751X129757182129758120Rat
1305249Snrpelsmall nuclear ribonucleoprotein E-likeX133163150133163576Rat
1359674Arhgef6Rac/Cdc42 guanine nucleotide exchange factor 6X135145447135264636Rat
1563777Plac1placenta enriched 1X132821347132955143Rat
1563789Rhox12Rhox homeobox family member 12X116890562116897981Rat
1562281RGD1562281similar to Eukaryotic translation initiation factor 5 (eIF-5)X113216161113217667Rat
1561445RGD1561445similar to novel proteinX115675412115725950Rat
1561901MGC114492similar to melanoma antigen family A, 5X131542773131546613Rat
1563975Tex13cTEX13 family member CX122469125122471627Rat
1561389Zdhhc9zinc finger DHHC-type palmitoyltransferase 9X127352340127388245Rat
1563270RGD1563270similar to synaptonemal complex protein 3X133857772133871791Rat
1564196Gpr101G protein-coupled receptor 101X135540042135543958Rat
1563150RGD1563150similar to B-cell translocation gene 1X116749728116754643Rat
1562057Frmd7FERM domain containing 7X130375925130423836Rat
1563753Frmpd3FERM and PDZ domain containing 3X103964168104113864Rat
1561004Ammecr1AMMECR nuclear protein 1X106465982106571382Rat
1561361Slitrk2SLIT and NTRK-like family, member 2X145246448145259983Rat
1561558RGD1561558similar to RIKEN cDNA 1700001F22X134184390134185772Rat
1561810Slc6a14solute carrier family 6 member 14X112314643112375412Rat
1564167RGD1564167similar to basic transcription factor 3X136385147136385621Rat
1565967Arhgap36Rho GTPase activating protein 36X128780148128787169Rat
1561678Tenm1teneurin transmembrane protein 1X121400466122289877Rat
1563582Slc9a6solute carrier family 9 member A6X134430588134486747Rat
1564481Atp11cATPase phospholipid transporting 11CX138564459138752116Rat
1561702Ctag2cancer/testis antigen 2X143531907143533201Rat
1563295RGD1563295similar to RIKEN cDNA 2310036O22X108794365108795038Rat
1559928Slc25a43solute carrier family 25, member 43X115977437116011789Rat
1311230C1galt1c1C1GALT1-specific chaperone 1X117378123117382620Rat
1566098Mcf2MCF.2 cell line derived transforming sequenceX138414077138514828Rat
1566108Bcorl1BCL6 co-repressor-like 1X127516504127584529Rat
1564038Vgll1vestigial-like family member 1X134979657134996007Rat
1563873Dcaf12l1DDB1 and CUL4 associated factor 12-like 1X123695286123698905Rat
1566035RGD1566035similar to protein tyrosine phosphatase 4a1X116789584116790544Rat
1563189Rhox7Rhox homeobox family member 7X116627645116635721Rat
1560129Pabir2PABIR family member 2X132989124133015625Rat
1564353Nup62clnucleoporin 62 C-terminal likeX103668458103724957Rat
1560204Nxt2nuclear transport factor 2-like export factor 2X105855616105862902Rat
1359693Rnf113a1ring finger protein 113A1X116428037116429164Rat
1565674Mid2midline 2X104354692104456757Rat
1562408Sh2d1aSH2 domain containing 1AX121373693121401923Rat
1561055Ftl1l1ferritin light chain 1-like 1X131765928131766849Rat
1563291Rhox10reproductive homeobox 10X116850460116854898Rat
1562442Irs4insulin receptor substrate 4X105344016105359985Rat
1561046Smarca1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1X126980201127066385Rat
1561047Rhox8reproductive homeobox 8X116584742116588365Rat
1359486Mospd1motile sperm domain containing 1X133100200133127960Rat
1563084Tbc1d8bTBC1 domain family member 8BX103319181103407137Rat
1563086Sowahdsosondowah ankyrin repeat domain family member DX116292030116293660Rat
1564866RGD1564866similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein)X107752105107759183Rat
1566008RGD1566008similar to RIKEN cDNA 1700001F22X135622322135623034Rat
1562693Rbmx2RNA binding motif protein, X-linked 2X127888514127896239Rat
1561327RGD1561327similar to melanoma antigen family A, 10X139529048139710648Rat
1564845RGD1564845similar to Xlr-likeX133561127133574507Rat
1359416Alg13ALG13, UDP-N-acetylglucosaminyltransferase subunitX107885039107906264Rat
1560264Upf3bUPF3B, regulator of nonsense mediated mRNA decayX116335308116353332Rat
1559581Zfp36l3zinc finger protein 36, C3H type-like 3X133550348133553677Rat
1564027AmotangiomotinX108982399109041265Rat
1334403Olr1765olfactory receptor 1765X129014048129014986Rat
1562042Stag2stromal antigen 2X120974687121105677Rat
1564057Adgrg4adhesion G protein-coupled receptor G4X134734610134864449Rat
1564059Fmr1nbFMR1 neighborX147309600147332421Rat
1560743Elf4E74 like ETS transcription factor 4X127587401127639063Rat
1359534Ube2aubiquitin-conjugating enzyme E2AX116114339116125076Rat
1564707Dock11dedicator of cytokinesis 11X115131720115314854Rat
1560119RGD1560119similar to actin alpha 1 skeletal muscle proteinX121159206121162455Rat
1560124RGD1560124similar to ribosomal protein L10aX117620592117621326Rat
1334384Olr1767olfactory receptor 1767X129289761129290684Rat
1563844Rhox9reproductive homeobox 9X116641863116644714Rat
1560171RGD1560171similar to PRO0149 proteinX138921816138924124Rat
1560768Dcaf12l2DDB1 and CUL4 associated factor 12-like 2X123293761123296550Rat
1359559Actrt1actin-related protein T1X125584102125585455Rat
1359439Zcchc12zinc finger CCHC-type containing 12X115433444115436691Rat
1585082Septin6septin 6X116153255116230334Rat
1563643Enox2ecto-NOX disulfide-thiol exchanger 2X128270941128593074Rat
1584423LOC684932similar to Zinc finger protein 75X134035116134053765Rat
1586045LOC367694similar to Fumarate hydratase, mitochondrial precursor (Fumarase)X118692571118694745Rat
1565430RGD1565430similar to RIKEN cDNA 1700001F22X126731780126732483Rat
1585073LOC691344similar to Breast carcinoma amplified sequence 2 homolog (DNA amplified in mammary carcinoma 1 protein)X116026387116027059Rat
1566390Mcts1MCTS1, re-initiation and release factorX117350723117362504Rat
1584679LOC681065hypothetical protein LOC681065X106745679106746330Rat
1566355RGD1566355similar to cell division cycle 2-like 1X107573678107590244Rat
1566363Akap17bA kinase (PRKA) anchor protein 17BX115843263115881597Rat
1359313Utp14aUTP14A small subunit processome componentX127439282127464634Rat
1560293Sash3SAM and SH3 domain containing 3X127326815127341521Rat
1560105RGD1560105similar to 40S ribosomal protein S19X107697983107698439Rat
1566136RGD1566136similar to 40S ribosomal protein S9X105572159105572766Rat
1563286Tmem164transmembrane protein 164X106288019106448642Rat
1583844LOC302833similar to CG2691-PAX140045052140052767Rat
1583845LOC302827similar to cytoplasmic beta-actinX141089014141090369Rat
1583846LOC302814similar to glycogen synthase 1, muscleX127918793127920680Rat
1583847LOC302804hypothetical LOC302804X126904676126906513Rat
1359246Magea13MAGE family member A13X137070707137076566Rat
1583851LOC300277similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)X105466456105467608Rat
1585248LOC688760similar to protein tyrosine phosphatase 4a1X137876096137876672Rat
1564494Cul4bcullin 4BX117287481117326688Rat
1566387RGD1566387similar to hypothetical proteinX114972836115005286Rat
1563524Hspd1-ps21heat shock protein 1, pseudogene 21X125679740125680618Rat
1584124LOC688842hypothetical protein LOC688842X138779374138819595Rat
1587436LOC691151similar to 40S ribosomal protein S2X120749512120753948Rat
1565032RGD1565032similar to transcription elongation factor B (SIII), polypeptide 2X115936938115937292Rat
1583501Kcne5potassium voltage-gated channel subfamily E regulatory subunit 5X105930398105931013Rat
1563272Magec2MAGE family member C2X140610610140615484Rat
1583914LOC691459similar to protein phosphatase 1, catalytic subunit, gamma isoformX112812252112814475Rat
1566225RGD1566225similar to RIKEN cDNA 1700001F22X129470473129471169Rat
1565955NkapNFKB activating proteinX116373031116392677Rat
1566309Zbtb33zinc finger and BTB domain containing 33X116963337116970547Rat
1566312Dnaaf6dynein axonemal assembly factor 6X103724419103775633Rat
1560247Cldn2claudin 2X103459870103473794Rat
1564669Zfp280czinc finger protein 280CX127716403127807600Rat
1563280Rab33aRAB33A, member RAS oncogene familyX127694219127706378Rat
1565570Vsig1V-set and immunoglobulin domain containing 1X104607031104640128Rat
1561623Thoc2THO complex 2X120634966120749569Rat
1563377Htatsf1HIV-1 Tat specific factor 1X134935426134949607Rat
1566339Mmgt1membrane magnesium transporter 1X134408463134420798Rat
1560927RGD1560927RGD1560927X116441825116444647Rat
1565514Map7d3MAP7 domain containing 3X134619227134647525Rat
1565644Ldoc1LDOC1, regulator of NFKB signalingX139965511140074355Rat
1565834Mbnl3muscleblind-like splicing regulator 3X130641942130737179Rat
1561261Zic3Zic family member 3X136123662136134295Rat
1560955Ndufa1NADH:ubiquinone oxidoreductase subunit A1X116424223116427875Rat
1566129RGD1566129similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)X124880957124888417Rat
1565692Suv39h1SUV39H1 histone lysine methyltransferaseX141793695141795558Rat
1563568Stk26serine/threonine kinase 26X130310855130375677Rat
1582915LOC688992similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor)X139848861139851502Rat
1584897LOC367757similar to eukaryotic translation initiation factor 4BX109595488109597454Rat
1584898Luzp4leucine zipper protein 4X111280490111321363Rat
1584899LOC367750similar to RIKEN cDNA 1110007M04X111888462111890563Rat
1565256RbmxRNA binding motif protein, X-linkedX135305237135314806Rat
1565494Magea9MAGE family member A9X142619282142624654Rat
1582942Dtx2-ps1deltex homolog 2 (Drosophila), pseudogene 1X139675169139680751Rat
1565499Col4a5collagen type IV alpha 5 chainX105118762105322699Rat
1565592Aff2AF4/FMR2 family, member 2X147928130148432484Rat
1584907LOC367705similar to Ras-GTPase-activating protein binding protein 1 (ATP-dependent DNA helicase VIII) (GAP SH3-domain binding protein 1) (G3BP-1) (HDH-VIII)X113416013113418436Rat
1563443Usp26ubiquitin specific peptidase 26X131317200131363964Rat
1564332Rhox11Rhox homeobox family member 11X116871847116880098Rat
1584677LOC681067similar to RIKEN cDNA 1700001F22X124788553124789270Rat
1559905Morc4MORC family CW-type zinc finger 4X103477366103529026Rat
1564541Steep1STING1 ER exit protein 1X116087626116114159Rat
1565307Rhox4greproductive homeobox 4GX116472094116477855Rat
1566184RGD1566184similar to Testis derived transcriptX114757064114815923Rat
1582974LOC688933similar to Steroid hormone receptor ERR2 (Estrogen-related receptor, beta) (ERR-beta) (Estrogen receptor-like 2) (ERR beta-2)X139508700139509825Rat
1564955RGD1564955similar to fibrous sheath interacting protein 2X128076772128109233Rat
1565451Lonrf3LON peptidase N-terminal domain and ring finger 3X115565214115603886Rat
1565338RGD1565338similar to voltage-dependent anion channel 1X146382712146384480Rat
1593525LOC689339similar to developmental pluripotency associated 4 isoform 2X144946918144947664Rat
1589746LOC315380similar to hormone-regulated proliferation-associated 20 kDa proteinX111803082111805851Rat
1589747LOC315370similar to heat shock protein 1, alphaX110207305110214134Rat
1590266Pabir3PABIR family member 3X133020162133083801Rat
1588662LOC691030similar to RIKEN cDNA 1700001F22X123264998123265711Rat
1589978LOC689600hypothetical protein LOC689600X147419923147420604Rat
1590643LOC680517similar to heterogeneous nuclear ribonucleoprotein MX111324802111327221Rat
1590569Lrch2leucine rich repeats and calponin homology domain containing 2X111091728111174225Rat
1590579Rbm41RNA binding motif protein 41X103605732103660381Rat
1592282LOC689480similar to Adhesion-regulating molecule 1 precursor (110 kDa cell membrane glycoprotein) (Gp110) (ARM-1)X147226579147230411Rat
1591096LOC689531similar to Saccharomyces cerevisiae Nip7p homologX147645990147646564Rat
1588562Rap2cRAP2C, member of RAS oncogene familyX130504554130517671Rat
1588563Slitrk4SLIT and NTRK-like family, member 4X142706495142718968Rat
1593086Rtl8aretrotransposon Gag like 8AX133414027133415240Rat
1594344LOC503425similar to 40S ribosomal protein S15 (RIG protein)X115101013115101602Rat
1585885LOC680904similar to 60S acidic ribosomal protein P0 (L10E)X107809622107810665Rat
1586013LOC501532similar to Actin, cytoplasmic 2 (Gamma-actin)X109619907109621911Rat
1586014LOC501529similar to poly(rC) binding protein 2X111934105111936526Rat
1564397Hs6st2heparan sulfate 6-O-sulfotransferase 2X130966547131261629Rat
1584453Zfp449zinc finger protein 449X134120820134140921Rat
1586289LOC691215hypothetical protein LOC691215X117556991117756327Rat
1359399Gpc4glypican 4X131644711131755349Rat
1587018Tex13btestis expressed 13BX104490937104511224Rat
1586454LOC688646similar to RIKEN cDNA 1700001F22X136154076136154621Rat
1583341Prr32proline rich 32X123977960123979917Rat
1588241LOC680725similar to prohibitinX109377891109378863Rat
1586244LOC691267similar to Protein C20orf155 homologX116707078116712324Rat
1588188Rtl4retrotransposon Gag like 4X108231052108641768Rat
1590912LOC298327similar to testis derived transcript isoform 1X114872762114873984Rat
1584861LOC501640similar to heterogeneous nuclear ribonucleoprotein A3X128002204128003535Rat
1589724Col4a6collagen type IV alpha 6 chainX104766463105117499Rat
1586264Rhox13Rhox homeobox family member 13X116911157116917938Rat
1585304LOC688702similar to RIKEN cDNA 1700001F22X136825997136826693Rat
1588264Ripply1ripply transcriptional repressor 1X103436731103440904Rat
1586238LOC691273similar to Protein C20orf155 homologX116677939116679090Rat
1586239LOC691272similar to reproductive homeobox on X chromosome, 11X116688163116695111Rat
1596590LOC683903similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30)X125866402125867050Rat
1595365LOC681466similar to prohibitinX105595157105596244Rat
1598343LOC300303similar to Nucleophosmin (NPM) (Nucleolar phosphoprotein B23) (Numatrin) (Nucleolar protein NO38)X111554751111557418Rat
1596915Atg4aautophagy related 4A, cysteine peptidaseX104665345104765271Rat
1594526OcrlOCRL, inositol polyphosphate-5-phosphataseX127089508127140362Rat
1593468LOC689396similar to RNA polymerase II elongation factor ELL2X145878600145888249Rat
1596907LOC678777hypothetical protein LOC678777X135460038135460939Rat
1593267LOC298175similar to stem cell derived neuronal survival protein precursorX119699856119700275Rat
1597183LOC293917similar to heterogeneous nuclear ribonucleoprotein H2X147232570147237507Rat
1597157LOC305639similar to heat shock protein 8X124067885124069814Rat
1596788LOC681300similar to CXXC finger 5X126891110126892526Rat
1592859Ct45a9cancer/testis antigen family 45 member A9X134345175134355174Rat
1592872Ints6lintegrator complex subunit 6 likeX134258117134325706Rat
1596967LOC678717similar to eukaryotic translation initiation factor 3, subunit 12X120567963120568598Rat
1588607Rhox2Rhox homeobox family member 2X116507488116514240Rat
1590178LOC685790similar to Protein CXorf48 (Tumor antigen BJ-HCC-20)X133882119133890487Rat
1596189LOC689114similar to NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial precursorX141292419141293051Rat
1594336LOC503477similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)X124938528124939351Rat
1594337LOC503475similar to HMG2 like isoform 1X124791570124792075Rat
1588178LOC680788hypothetical protein LOC680788X108608117108608932Rat
1592296LOC689466similar to Mitochondrial ornithine transporter 1 (Solute carrier family 25 member 15)X147183874147186518Rat
1591839Sox3SRY-box transcription factor 3X139308608139310734Rat
1598239LOC367975similar to B-cell translocation gene 1X116794228116805478Rat
1598241LOC367955similar to tropomyosin 3, gamma isoform 2X139891089139894903Rat
1598242LOC367953similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin)X139670709139671569Rat
1598243LOC367943similar to ribosomal protein L27X136090643136091029Rat
1598244LOC367942similar to heat shock protein 1, betaX135024943135027698Rat
1598247LOC367933similar to 60S ribosomal protein L7X131801463131802203Rat
1598248LOC367925similar to glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)-likeX124948493124949499Rat
1598249LOC367923similar to 60S ribosomal protein L23aX104318144104318623Rat
1598351LOC295142similar to peptidylprolyl isomerase DX110524551110525661Rat
1596721LOC681369similar to karyopherin (importin) alpha 2X127072965127074744Rat
1597791Ccdc160coiled-coil domain containing 160X132468141132478616Rat
1596894LOC678792similar to transmembrane 9 superfamily member 2X135462751135497336Rat
2301305Rhox3reproductive homeobox on X chromosome 3X116482945116487394Rat
2318564LOC100362221protein phosphatase 3, catalytic subunit, betaX145949639145951105Rat
2318128LOC100362460hypothetical LOC100362460X146989801146990112Rat
2319295LOC100361883mitochondrial ribosomal protein L30X115956680115957166Rat
2319323LOC100361854ribosomal protein S26-likeX107822116107822555Rat
2318749LOC100362134ribosomal protein 10-likeX145734976145735664Rat
2318325LOC100362361interferon alpha responsive-likeX146278319146302781Rat
2318935LOC100362046WD repeats and SOF domain containing 1-likeX143382660143384002Rat
2320188LOC100364877high-mobility group box 4-likeX132703106132703824Rat
2320301LOC100361364hypothetical LOC100361364X111799148111800089Rat
2322060Fam9bfamily with sequence similarity 9, member BX133519540133531969Rat
2322277LOC100360376hypothetical LOC100360376X123861955123865635Rat
2323032LOC100363413hypothetical LOC100363413X112248482112249885Rat
2320902LOC100361058synaptophysin-like 1-likeX138145492138146285Rat
2322455LOC100360296BRCA2-interacting protein-likeX133754358133765931Rat
2322505LOC100360246hypothetical LOC100360246X133878251133881490Rat
2322526LOC100360224hypothetical LOC100360224X122505315122506003Rat
2323188LOC100363355hypothetical LOC100363355X112739910112743858Rat
2322607LOC100363642coiled-coil domain-containing protein 41-likeX133428069133430845Rat
2321855LOC100364002reproductive homeobox 9-likeX116560244116562636Rat
2321147LOC100360912ATP synthase beta-subunit-likeX136361979136362619Rat
2321936LOC100360521mitochondrial ribosomal protein S36-likeX122467665122467913Rat
2322721LOC100360128CDNA sequence BC049702-likeX117151627117153132Rat
2321164LOC100364395hypothetical LOC100364395X106867311106868233Rat
4145145Prkar1a-ps1protein kinase, cAMP dependent regulatory, type I, alpha, pseudogene 1X141340329141340583Rat
2323526Phf6PHD finger protein 6X132656658132699720Rat
2323548LOC100363191tubulin, gamma 1-likeX119455925119456663Rat
2324261LOC100362697mCG17902-likeX129741370129742631Rat
2324302LOC100362656hypothetical LOC100362656X110292959110298026Rat
4888539Mir3580microRNA 3580X145445018145445098Rat
4888578Mir3585microRNA 3585X146662031146662148Rat
4888584Mir1912microRNA 1912X110685978110686065Rat
2325338Mir351microRNA 351X132805563132805643Rat
2325339Mir465microRNA 465X145446770145446846Rat
2325342Mir880microRNA 880X145431384145431461Rat
2325352Mir764microRNA 764X110678597110678704Rat
2325372Mir448microRNA 448X110829918110830029Rat
2325419Mir881microRNA 881X145433306145433382Rat
2325420Mir20bmicroRNA 20bX132422211132422282Rat
2325422Mir542microRNA 542X132802623132802701Rat
2325439Mir652microRNA 652X106343293106343373Rat
2325444Mir743bmicroRNA 743bX145403182145403258Rat
2325446Mir363microRNA 363X132421791132421877Rat
2325467Mir322microRNA 322X132806594132806688Rat
2325473Mir547microRNA 547X146667404146667484Rat
2325476Mir201microRNA 201X146667106146667185Rat
2325482Mir504microRNA 504X137318540137318616Rat
2325490Mir743amicroRNA 743aX145402692145402767Rat
2325491Mir742microRNA 742X145410176145410252Rat
2325497Mir471microRNA 471X145421500145421577Rat
2325498Mir463microRNA 463X145425426145425503Rat
2325506Mir106amicroRNA 106aX132422584132422661Rat
2325508Mir883microRNA 883X145410566145410642Rat
2325509Mir878microRNA 878X145432857145432933Rat
2325512Mir871microRNA 871X145437183145437259Rat
2325515Mir505microRNA 505X138742487138742553Rat
2325516Mir503microRNA 503X132806303132806373Rat
2325535Mir450a1microRNA 450a-1X132801380132801470Rat
2325583Mir92a2microRNA 92a-2X132421942132422033Rat
2325599Mir19b2microRNA 19b-2X132422072132422167Rat
4888564Mir3551microRNA 3551X145422221145422302Rat
4888567Mir741microRNA 741X145423753145423848Rat
4888609Mir3552microRNA 3552X110676724110676828Rat
2324557LOC100362376LRRGT00025-likeX113427370113427696Rat
2324802LOC100363087estrogen receptor binding site associated antigen 9-likeX121289238121289878Rat
4888571Mir3589microRNA 3589X138742465138742576Rat
6486824Rtl9retrotransposon Gag like 9X106708454106720607Rat
6488326LOC100912196synaptonemal complex protein 3-likeX146218106146237824Rat
6489572LOC100912044protein phosphatase inhibitor 2-likeX113070197113072903Rat
6489636LOC100911920zinc finger protein ZPR1-likeX119774008119781347Rat
6488918LOC10091205560S ribosomal protein L15-likeX145387769145388426Rat
6495215LOC100911021putative ribosomal RNA methyltransferase NOP2-likeX142993210142997694Rat
6487554Fam9cfamily with sequence similarity 9, member CX146236386146256079Rat
6493681LOC100911253uncharacterized LOC100911253X111829130111944986Rat
6491579LOC100911640ATP synthase subunit gamma, mitochondrial-likeX130540508130544705Rat
6498758LOC100910451uncharacterized LOC100910451X133464033133470551Rat
6498897LOC100910364eukaryotic translation initiation factor 3 subunit E-likeX142444787142446098Rat
6499092Cdr1cerebellar degeneration related protein 1X139590816139594141Rat
6502223LOC100909656glyceraldehyde-3-phosphate dehydrogenase-likeX124869932124870723Rat
6499494LOC100910230protein kinase C and casein kinase substrate in neurons protein 2-likeX103592017103593460Rat
6503255Trpc5osTRPC5 opposite strandX108025172108044201Rat
6500424NkrfNFKB repressing factorX116126341116144577Rat
6498130LOC100910458nucleophosmin-likeX127960832127968169Rat
6498529LOC10091040360S acidic ribosomal protein P0-likeX142476514142477486Rat
7489026Mir509microRNA 509X146688132146688216Rat
7519078Ct47b1cancer/testis antigen family 47, member B1X115651472115655191Rat
7489010Mir1298microRNA 1298X110744907110745045Rat
7506435LOC102555213uncharacterized LOC102555213X124466651124468789Rat
7528448LOC102550366uncharacterized LOC102550366X132805407132809653Rat
7663400LOC102548382glyceraldehyde-3-phosphate dehydrogenase-likeX118185012118206590Rat
7650932LOC102553553uncharacterized LOC102553553X115025996115030878Rat
7658474LOC102550129nuclear receptor subfamily 5 group A member 2-likeX110903809110905163Rat
7642968LOC102549210L-lactate dehydrogenase A chain-likeX122549678122552543Rat
7611199LOC102550812uncharacterized LOC102550812X125223196125303856Rat
7752647LOC102550607uncharacterized LOC102550607X131546740131727188Rat
7673510Sertm2serine rich and transmembrane domain containing 2X107727772107739795Rat
7677568LOC102546822uncharacterized LOC102546822X140885547140899003Rat
7724551LOC102550394uncharacterized LOC102550394X133475953133495771Rat
7669826LOC102553384protein crumbs homolog 1-likeX126583668126588654Rat
7722198LOC10254727560S ribosomal protein L21-likeX141669916141670224Rat
7730159LOC102546596pre-mRNA-splicing factor CWC22 homologX140185366140255965Rat
9214037LOC103690768histidine triad nucleotide-binding protein 1 pseudogeneX111887970111888349Rat
9145805LOC103694587high mobility group protein B4-likeX130143801130144494Rat
9146728LOC10369088960S ribosomal protein L39 pseudogeneX106046331106046530Rat
9081780LOC103690899histidine triad nucleotide-binding protein 1 pseudogeneX114629601114636435Rat
9082754LOC103690083uncharacterized LOC103690083X130001844130069421Rat
9296500LOC103694491uncharacterized protein MGC39606 homologX134151306134154647Rat
9343299LOC10369088860S ribosomal protein L10a-likeX104902239104902979Rat
9345774LOC103690894uncharacterized LOC103690894X114922993114939876Rat
9372497LOC103694526uncharacterized LOC103694526X146743750146898115Rat
9317736LOC103690904high mobility group protein B4-likeX131862544131863238Rat
9406132LOC103694504uncharacterized LOC103694504X104462320104535699Rat
11359441LOC10834925260S ribosomal protein L23 pseudogeneX121754412121754975Rat
11468204LOC108349189high mobility group protein B1 pseudogeneX107671273107672015Rat
11468725LOC108349245ribosome biogenesis protein NSA2 homolog pseudogeneX108116385108117264Rat
11475262LOC108349202glyceraldehyde-3-phosphate dehydrogenase pseudogeneX143320389143321407Rat
11444048LOC108349174heterogeneous nuclear ribonucleoprotein A1 pseudogeneX133546705133547990Rat
11428339LOC108348228heat shock transcription factor, X-linked-likeX146126163146128629Rat
11453602LOC108349244putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13X107906320107968232Rat
11454080LOC108349247uncharacterized LOC108349247X113934651113951129Rat
11417755LOC108349198cytochrome c oxidase subunit NDUFA4 pseudogeneX126399588126399833Rat
11417756LOC108349258high mobility group protein B4-likeX136290250136290937Rat
11427469LOC108352140high mobility group protein B4-likeX130942850130943537Rat
11373868LOC108349149igE-binding protein-likeX116664953116666436Rat
11409794LOC108349250actin, cytoplasmic 2-likeX117902835117903594Rat
11387321LOC108349153glyceraldehyde-3-phosphate dehydrogenase pseudogeneX123195230123198628Rat
11391862LOC10834919560S ribosomal protein L7a pseudogeneX118279924118280718Rat
11518973LOC108349260uncharacterized LOC108349260X145496420145500982Rat
11478890LOC108349193glyceraldehyde-3-phosphate dehydrogenase pseudogeneX114319412114321561Rat
11495173LOC108353273golgin subfamily A member 6-like protein 22X146589314146591696Rat
11518088LOC108349199glyceraldehyde-3-phosphate dehydrogenase pseudogeneX126965477126966448Rat
11518134LOC108353282glyceraldehyde-3-phosphate dehydrogenase pseudogeneX127421637127422622Rat
11488394LOC108349259uncharacterized LOC108349259X145425526145449009Rat
14398596Mir450b-1microRNA mir-450b-1X132801525132801593Rat
41354497LOC120099455small nucleolar RNA SNORA42/SNORA80 familyX117874309117874425Rat
41378756LOC120099264protein SEC13 homologX123733294123742416Rat
41086782LOC120099263uncharacterized LOC120099263X108678823108701907Rat
41111313LOC120099214uncharacterized LOC120099214X133266846133276397Rat
41355609LOC120099489small nucleolar RNA SNORA17X117548920117549051Rat
41087468LOC120099434U7 small nuclear RNAX109520306109520359Rat
41113214LOC120099353poly(rC)-binding protein 2-likeX111940034111943599Rat
41113568LOC120099259cancer/testis antigen 55-likeX133346508133353120Rat
41204737LOC120099272high mobility group protein B4-likeX128868498128869190Rat
41250482LOC120099343uncharacterized LOC120099343X144879843144880749Rat
41284281LOC120099346heat shock protein HSP 90-beta-likeX124335515124337028Rat
41383546LOC120099269uncharacterized LOC120099269X124406821124447609Rat
41384159LOC120099427U6 spliceosomal RNAX111958839111958897Rat
41206460LOC120099378uncharacterized LOC120099378X111708629111782670Rat
41279441LOC120099252GTPase NRas-likeX116756806116763275Rat
41325721LOC120099203uncharacterized LOC120099203X125508395125647104Rat
41385866LOC120099452small nucleolar RNA SNORA36 familyX116009779116009910Rat
41206828LOC120099514small nucleolar RNA SNORA40X111573914111574039Rat
41286332LOC120099248uncharacterized LOC120099248X133770808133779325Rat
41287397LOC12009931439S ribosomal protein L30, mitochondrial-likeX131057674131123323Rat
41360768LOC120099250U1 small nuclear ribonucleoprotein C-likeX135673708135678865Rat
41360898LOC120099192uncharacterized LOC120099192X133723548133726977Rat
41388056LOC120099476small nucleolar RNA SNORA48X115916685115916825Rat
41146332NEWGENE_40938314transfer RNA serine (anticodon AGA)X121251163121251237Rat
41209783LOC120099535U2 spliceosomal RNAX106435897106435976Rat
41388172LOC12009935740S ribosomal protein S27-likeX120201439120201694Rat
41093266LOC120093120high mobility group protein B4-likeX126735348126736018Rat
41146938LOC120099169keratinocyte proline-rich protein-likeX116572842116577387Rat
41174212LOC120099397U6 spliceosomal RNAX141113775141113881Rat
41175521LOC120099407U6 spliceosomal RNAX144682339144682457Rat
41261024LOC120099285uncharacterized LOC120099285X142526265142528111Rat
41329173LOC120099414U6 spliceosomal RNAX134571259134571364Rat
41330088LOC120099493small nucleolar RNA SNORA17X112132302112132432Rat
41390843LOC120099469U1 spliceosomal RNAX127414084127414227Rat
41149933LOC120099459small nucleolar RNA SNORA1X116020859116020995Rat
41331878LOC120099449small nucleolar RNA SNORA69X116327776116327909Rat
41364990LOC120099347ubiquitin carboxyl-terminal hydrolase puf-likeX144385855144386558Rat
41365780LOC120099391U6 spliceosomal RNAX112716579112716685Rat
41178721LOC12009916460S ribosomal export protein NMD3-likeX103548909103550563Rat
41122277LOC120099356uncharacterized LOC120099356X111913034111918433Rat
41122630LOC120099315uncharacterized LOC120099315X133820662133835679Rat
41180249LOC120099190cancer/testis antigen 55-likeX133631948133643916Rat
41191688LOC12009918060S ribosomal protein L18-likeX135789332135832927Rat
41266373LOC120099517small nucleolar RNA SNORA35X111101754111101882Rat
41367602LOC120099534U2 spliceosomal RNAX111874817111874960Rat
41394214LOC120099477small nucleolar RNA SNORA48X103852572103852714Rat
41182025LOC120099389non-histone chromosomal protein HMG-17-likeX134940799134941081Rat
41370240LOC120099528U2 spliceosomal RNAX121161958121162061Rat
41069880LOC120099512small nucleolar RNA SNORA17X146092924146093007Rat
41127291LOC120099501small nucleolar RNA SNORA17X106104376106104501Rat
41158935NEWGENE_40934091transfer RNA alanine (anticodon AGC)X144291735144291816Rat
41160492LOC120099249uncharacterized LOC120099249X107883646107885386Rat
41183603LOC120099417U6 spliceosomal RNAX115600746115600818Rat
41184806LOC120099274transcription factor BTF3-likeX134537822134538517Rat
41185080LOC120099499small nucleolar RNA SNORA17X121544402121544533Rat
41185184LOC120099448small Cajal body-specific RNA 13X115087944115088214Rat
41195353LOC120099189cancer/testis antigen 55-likeX133675275133686790Rat
41270159LOC120099173tyrosine-protein kinase Fer-likeX120637118120638167Rat
41292304LOC120099354poly(rC)-binding protein 2-likeX111924205111927837Rat
41228863LOC120099415U6 spliceosomal RNAX104370458104370564Rat
41229816LOC120099243high mobility group protein B4-likeX137565511137566102Rat
41271235LOC120099423U6 spliceosomal RNAX139663649139663750Rat
41271583LOC120099355uncharacterized LOC120099355X111831770111837168Rat
41401096LOC120099495small nucleolar RNA SNORA17X108436348108436479Rat
41081948LOC120099277NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-likeX127554839127557892Rat
41130514LOC120099418U6 spliceosomal RNAX114663691114663792Rat
41130542LOC120099176igE-binding protein-likeX123925106123930062Rat
41197927LOC120099544U2 spliceosomal RNAX107988410107988589Rat
41294118LOC120099361uncharacterized LOC120099361X134003802134004865Rat
41295416LOC120099175uncharacterized LOC120099175X123357769123362512Rat
41403101LOC120099166uncharacterized protein C9orf85 homologX112816111112816567Rat
41082672LOC120099202uncharacterized LOC120099202X145395235145425397Rat
41232192LOC120099390U6 spliceosomal RNAX133395235133395341Rat
41083924LOC120099246peptidyl-prolyl cis-trans isomerase H-likeX110290281110293522Rat
41134219LOC120099292uncharacterized LOC120099292X105897251105928718Rat
40971688LOC120099529U2 spliceosomal RNAX144268483144268678Rat
40947786LOC120099287cancer/testis antigen 55-likeX133791523133815392Rat
40947923LOC120099179igE-binding protein-likeX133623908133628085Rat
41011122LOC120099352poly(rC)-binding protein 2-likeX111843404111847096Rat
41012133LOC120099421U6 spliceosomal RNAX127487350127487446Rat
40974168LOC120099402U6 spliceosomal RNAX136489271136489377Rat
40975408LOC120099475small nucleolar RNA SNORA48X116931587116931725Rat
41341586NEWGENE_40926764transfer RNA proline (anticodon AGG)X116027434116027514Rat
40954503LOC120099165uncharacterized LOC120099165X111787266111794068Rat
40955085LOC12009309640S ribosomal protein SA-likeX104461338104462092Rat
41014667LOC120099174MLV-related proviral Env polyprotein-likeX122620730122623492Rat
40929687LOC120099516small nucleolar RNA SNORA35X110671942110672069Rat
40981226LOC120099178MICOS complex subunit Mic19-likeX131314718131319739Rat
40930597LOC120099172high mobility group protein B1-likeX118058455118059327Rat
40982935LOC120099290embryonic testis differentiation protein-likeX133223810133233159Rat
40982944LOC120099450small nucleolar RNA SNORD61X135313247135313319Rat
40983609LOC120099404U6 spliceosomal RNAX125329941125330045Rat
40933887LOC12009916740S ribosomal protein S26-likeX113601665113609965Rat
40960803LOC120099217uncharacterized LOC120099217X116791039116793489Rat
40937392LOC120099270uncharacterized LOC120099270X133853071133859654Rat
41009217NEWGENE_40933816transfer RNA valine (anticodon AAC)X105667790105667864Rat
40989803LOC120099504small nucleolar RNA SNORA17X147121405147121505Rat
41009708LOC120099216myelin-associated neurite-outgrowth inhibitor-likeX116834576116835163Rat
40992710LOC120099376uncharacterized LOC120099376X131866965131925528Rat
40969381LOC120099255high mobility group protein B4-likeX132449891132450601Rat
40943345LOC120099554U6 spliceosomal RNAX131991651131991757Rat
40970234LOC120099168proline-rich extensin-like protein EPR1X116571246116572833Rat
41046912LOC120099301uncharacterized LOC120099301X114425480114471782Rat
41047538LOC120099410U6 spliceosomal RNAX134157904134158009Rat
41313138LOC120099527U6atac minor spliceosomal RNAX146115931146116052Rat
41078949LOC120099170intraflagellar transport protein 52 homologX116594807116598029Rat
41246354LOC12009938740S ribosomal protein S4, X isoform-likeX103407238103415204Rat
41052230LOC120099395U6 spliceosomal RNAX132706378132706481Rat
41053422NEWGENE_40933816transfer RNA valine (anticodon AAC)X132606225132606299Rat
41338750LOC120099282cysteine-rich perinuclear theca protein 1-likeX118533863118534605Rat
41152601LOC120099129uncharacterized LOC120099129X134141038134151302Rat
41153163LOC120099188cancer/testis antigen 55-likeX133589642133602900Rat
41031103LOC120099265translation machinery-associated protein 7-likeX133251419133251829Rat
41318334LOC120099191cancer/testis antigen 55-likeX133692711133709349Rat
41058816LOC120099332uncharacterized LOC120099332X133984318133985849Rat
41223282LOC120099201alkaline phosphatase, tissue-nonspecific isozyme-likeX145388481145394341Rat
41298450LOC120099240POU domain, class 5, transcription factor 1-likeX132624801132626269Rat
41301363LOC120099466U11 spliceosomal RNAX109679057109679190Rat
41227588LOC120099519small nucleolar RNA SNORA26X127999183127999303Rat
41237125LOC120099195uncharacterized LOC120099195X127174430127179462Rat
41304628LOC120099488small nucleolar RNA SNORA17X129753052129753183Rat
41041398LOC120099550U4 spliceosomal RNAX123006992123007124Rat
41041497LOC120099177FUN14 domain-containing protein 2-likeX124496808124497966Rat
41240019LOC120099481small nucleolar RNA SNORA48X130775533130775672Rat
41046187LOC120099487small nucleolar RNA SNORA17X104501295104501421Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10124DXWox27134X112133718112133852Ratregion
10125DXMgh7230X112124540112124758Ratregion
10558DXWox30151X138400716138400867Ratregion
11029DXWox29294X127143992127144286Ratregion
33893D7Mit15150X124600195124600383Ratregion
36049DXRat19162X107292714107292880Ratregion
36215DXRat23126X136707001136707121Ratregion
36247DXRat130158X133365720133365888Ratregion
37078DXRat22227X122067615122067837Ratregion
37648DXRat73139X110631371110631508Ratregion
34783DXRat21148X125812805125812949Ratregion
34825DXRat20175X113805422113805597Ratregion
34991DXRat66138X110639479110639627Ratregion
39636DXRat115213X103865285103865500Ratregion
39724DXRat103133X126975089126975220Ratregion
39840DXRat117239X132425877132426116Ratregion
39862DXRat105196X138052086138052278Ratregion
41530DXRat104156X136437741136437891Ratregion
40690DXRat97148X107826652107826800Ratregion
39996DXRat101156X120948681120948841Ratregion
39120DXRat69248X112253959112254209Ratregion
39142DXRat55202X134429057134429259Ratregion
39210DXRat64241X112934952112935181Ratregion
39360DXRat63247X111179235111179484Ratregion
39434DXRat116212X127266809127267035Ratregion
39498DXRat118205X127438586127438793Ratregion
39514DXRat119249X134846591134846842Ratregion
41396DXRat100157X115075611115075776Ratregion
42440DXRat148204X106008181106008389Ratregion
42441DXRat150157X127845073127845244Ratregion
41624DXRat99145X117002093117002232Ratregion
41658DXRat129241X110631363110631602Ratregion
41778D17Rat146200X126998364126998571Ratregion
41896DXRat149239X128012298128012548Ratregion
43151DXRat132201X116926119116926150Ratregion
43163DXRat139245X111183810111184051Ratregion
43165DXRat142203X140755562140755763Ratregion
43166DXRat141207X135183402135183610Ratregion
44552D9Wox21136X136827745136827802Ratregion
43406DXGot57260X120556020120556280Ratregion
44360DXGot47187X109544084109544275Ratregion
43947DXWox3130X120568566120568734Ratregion
43950DXGot56163X121375172121375335Ratregion
43955DXGot54126X126441996126442122Ratregion
43956DXGot61141X113517713113517854Ratregion
60685DXGot46222X111179183111179407Ratregion
60686DXGot48250X116647192116647444Ratregion
60687DXGot4998X116904115116904211Ratregion
60688DXGot50148X115310181115310329Ratregion
60689DXGot51204X116074418116074624Ratregion
60690DXGot52167X117722055117722222Ratregion
60690DXGot52167X117722055117722222Ratregion
60691DXGot53257X116199160116199418Ratregion
60692DXGot58133X126421699126421832Ratregion
60695DXGot63147X116269250116269397Ratregion
60696DXGot64219X113419015113419234Ratregion
66696D1Uia17200X142552946142553146Ratregion
66722DXMco2277X121505375121505657Ratregion
1630344DXGot161209X106300074106300283Ratregion
1630816DXGot102237X103992664103992903Ratregion
1630841DXGot175229X144358419144358648Ratregion
1631344DXGot121125X108783743108783865Ratregion
1631455DXGot168293X128434944128435237Ratregion
1631802DXGot116298X113256622113256920Ratregion
1631967DXGot106172X136162021136162193Ratregion
1632053DXWox16305X132732989132733294Ratregion
1628053DXGot132234X138794053138794287Ratregion
1629391DXGot158239X136359121136359357Ratregion
1629595DXGot157275X137554255137554534Ratregion
1638718DXGot179196X147117629147117826Ratregion
1638722DXGot190158X141937659141937817Ratregion
1638817DXGot181125X147786007147786132Ratregion
1639228DXGot189114X145525014145525128Ratregion
1641070DXGot203217X107874509107874726Ratregion
1641420DXWox36X132237528132237746Ratregion
1635289DXGot171235X133841276133841518Ratregion
1635417DXGot119229X135340915135341291Ratregion
1635417DXGot119229X135340915135341144Ratregion
1635824DXGot167258X146194366146194619Ratregion
1635855DXGot112181X141714594141714775Ratregion
1636054DXGot103212X131228069131228281Ratregion
1636110DXGot166298X122933940122934238Ratregion
1637806DXGot147154X132678804132678960Ratregion
1633700DXGot160208X108339157108339360Ratregion
1633700DXGot160208X108339157108339360Ratregion
1633823DXGot140118X144131476144131594Ratregion
1633894DXWox35244X116539292116539536Ratregion
1634443DXGot126157X129502342129502496Ratregion
7205926PMC28413P1115X116761789116761904Ratregion
7193104AA924752189X111939024111939212Ratregion
7193104AA924752189X111933167111933355Ratregion
7193104AA924752189X111923266111923454Ratregion
5035851PMC23951P1565X109620324109620789Ratregion
5036011PMC85361P1357X109620276109620627Ratregion
5038738AW549906141X132699109132699250Ratregion
5038816RH127349195X138396489138396684Ratregion
5036057Cldn2693X103467561103468254Ratregion
5036157D11Bhm8895X111074368111074463Ratregion
5038946RH127423194X133430726133430920Ratregion
7206632Slc25a15950X147185942147186892Ratregion
7206640Sox3691X139308678139309369Ratregion
5039304RH127629218X106900903106901121Ratregion
5036783AU049191203X134976156134976359Ratregion
5036973AU049795223X105054231105054446Ratregion
5036973AU049795223X105054231105054439Ratregion
5036989AU049841263X130135232130135493Ratregion
5037109SHGC-53120185X135460254135460440Ratregion
5035581DBX87X116167281116167369Ratregion
5035610DXS8324122X117362343117362465Ratregion
5031214DXS790682X120977573120977655Ratregion
5033845RH140330146X115436518115436664Ratregion
5025992RH130489182X104656950104657132Ratregion
5028615AI451128287X113942335113942622Ratregion
7205800D1S2012E0X115210686115211098Ratregion
7206224Hs6st2221X130968960130969181Ratregion
5026134RH131042203X127464353127464556Ratregion
5028757RH142214155X116541446116541601Ratregion
5028879RH142673127X128271099128271226Ratregion
5034213RH141795195X117289193117289388Ratregion
5034323AI029857182X116482893116484406Ratregion
5026430RH132181192X107946335107946527Ratregion
5031820AU047046120X105105656105105776Ratregion
5029221RH143976202X107373970107374172Ratregion
5034788AI010734153X127140118127140272Ratregion
5029549BG375700177X133097828133098005Ratregion
5029799AI071251220X131644949131645169Ratregion
5034916AI008298220X116393490116393710Ratregion
5034944AA851932113X139710205139710318Ratregion
5034998UniSTS:257002178X133232960133233138Ratregion
5027443AW319508121X108898630108898751Ratregion
5027551AW10764087X112123581112123668Ratregion
5027553D8327798X127706245127706343Ratregion
5032993RH137224190X134297373134297563Ratregion
5025010AU022494218X139680514139680732Ratregion
5027683Suv39h1891X141794206141795097Ratregion
5030287BE099951163X106720395106720558Ratregion
5025168BB377684148X131642745131642893Ratregion
502790327.MMHAP18FLA6.seq226X145623162145623388Ratregion
5025428RH128278186X106466185106466371Ratregion
502796344.MMHAP34FRG11.seq195X136560095136560290Ratregion
5028031MHAa53g6.seq103X138442448138442551Ratregion
5033499RH139054162X111628349111628511Ratregion
5025632RH129063217X104657347104657564Ratregion
5028305DXMit238114X115320656115320770Ratregion
5031193RH102301153X115314413115314566Ratregion
5031209GDB:192503221X138395201138395422Ratregion
5056329RH144315110X135186611135186721Ratregion
5056459RH144390265X106438054106438319Ratregion
5051611AW260253127X116970302116970429Ratregion
5054355RH143176113X120436857120436970Ratregion
5057514AA819641201X117178827117179028Ratregion
5055771RH143993205X117358385117358590Ratregion
5054845RH143458117X145949718145949835Ratregion
5054983RH143538187X139590359139590546Ratregion
5059624BF394020223X127135238127135461Ratregion
5056655RH144503245X116226921116227165Ratregion
5052257L23971180X147276203147276383Ratregion
5052567AU023707168X115603531115603699Ratregion
5059736AI556806189X134614703134614892Ratregion
5055529RH143854143X131644860131645003Ratregion
5059988BE103656190X120674843120675033Ratregion
5052335U39738194X107367951107368145Ratregion
5052359X83577157X131644812131644969Ratregion
5058428BE096007141X105942849105942990Ratregion
5050796RH134263210X116335393116335603Ratregion
5053769RH142840184X121514665121514849Ratregion
5050046RH133831211X127685256127685467Ratregion
5050974RH134366211X132767834132768045Ratregion
5054187RH143080275X112374709112374984Ratregion
5050166RH133900217X130509768130509985Ratregion
5050320RH133988217X127439770127439987Ratregion
5054303RH143147137X115176803115176940Ratregion
5050566RH134130220X139308759139308977Ratregion
5050784RH134256205X105702568105702773Ratregion
5051499U30840105X146383339146383444Ratregion
5051727RH94622113X110867633110867746Ratregion
5054651RH143347107X115204825115205309Ratregion
5050902RH134324183X107589713107589896Ratregion
5051008RH134384215X134309179134309394Ratregion
5043946RH130322189X139680528139680717Ratregion
5043946RH130322189X139680528139680717Ratregion
5044178RH130454191X136129289136129480Ratregion
5045026RH130940197X116087909116088106Ratregion
5044188RH130460194X105322455105322649Ratregion
5045650RH131299194X134345240134345434Ratregion
5044802RH130812196X103480711103480907Ratregion
5046464RH131768182X116970298116970480Ratregion
5048972RH133212208X111620504111620713Ratregion
5046734RH131924188X140681929140682117Ratregion
5047992RH132646206X104766601104766809Ratregion
5047300RH132248200X116126415116126615Ratregion
5042724RH129607199X106296855106297054Ratregion
5042888RH129704182X117057329117057511Ratregion
5042022RH129193181X133446661133446842Ratregion
5042022RH129193181X133414023133414204Ratregion
5042022RH129193181X133369533133369714Ratregion
5040372RH128245203X107380969107381172Ratregion
5043252RH129919202X130642076130642278Ratregion
5043294RH129944157X121394412121394569Ratregion
5040060RH128066185X126894182126894368Ratregion
5041038RH128627208X119708403119708611Ratregion
5041038RH128627208X119708403119708611Ratregion
5041112RH128669163X113219370113219533Ratregion
5041260RH128755160X134949369134949529Ratregion
5043692RH130172182X147186112147186283Ratregion
5040440RH128284187X138922906138923093Ratregion
5072712RH137009199X109595553109595749Ratregion
5075148RH138426190X131869048131869238Ratregion
5073818RH137656137X148242995148243132Ratregion
5076400RH139153186X131018631131018817Ratregion
5072798RH137059181X108982573108982754Ratregion
5076992RH139497180X115436360115436540Ratregion
5075870RH138845179X140255659140255838Ratregion
5074828RH138242123X122297661122297784Ratregion
5077688RH139900186X127204002127204188Ratregion
5077746RH139933202X112123527112123728Ratregion
5076664RH139307199X132685648132685847Ratregion
5075784RH138795162X104153874104154036Ratregion
5076284RH139086208X134949037134949245Ratregion
5079574RH141078189X103727244103727433Ratregion
5079680RH141141182X132807646132807828Ratregion
5077162RH139598189X134408587134408776Ratregion
5077472RH139776200X130648778130648978Ratregion
5079854RH141241180X145412723145412766Ratregion
5077756RH139940196X115603643115603839Ratregion
5080092RH141378208X108898632108898836Ratregion
5080112RH141390196X132807218132807415Ratregion
5070706RH134657200X103436904103437104Ratregion
5073412RH137421197X127895929127896126Ratregion
5078774RH140544249X133119618133119867Ratregion
5071270RH134985184X115314589115314773Ratregion
5073546RH137499202X117376837117377039Ratregion
5074218RH137889136X107372564107372700Ratregion
5071256RH134977213X133550344133550557Ratregion
5063324BE107538173X138929148138929321Ratregion
5066640AU048238114X130301124130301238Ratregion
5066898AU048085179X131657635131657814Ratregion
5067674AU047603160X146683828146683988Ratregion
5067692AU047593283X124194668124194946Ratregion
5067758AU047554226X133221428133221649Ratregion
5067932AU047450213X109480507109480722Ratregion
5067994AU047413142X121719358121719504Ratregion
5068024AU047395212X126609746126609953Ratregion
5067576AU047662280X147771159147771432Ratregion
5068112AU047340148X122095371122095519Ratregion
5068864AU046878297X135095548135095845Ratregion
5069400AU046524162X112423508112423667Ratregion
5069528AU046438261X117344411117344672Ratregion
5070159RH9450695X141340349141340444Ratregion
5070159RH9450695X141340349141340444Ratregion
5069566AU046411206X109794791109795534Ratregion
5069694AU046333175X121172635121172810Ratregion
5069092AU046730264X136359127136359388Ratregion
5069110AU046719259X136359127136359386Ratregion
5069268AU046608248X105922529105922605Ratregion
5060086BF388460165X130058018130058183Ratregion
5060140AI072432187X116156950116157137Ratregion
5062054BI288264206X140615060140615266Ratregion
5065148BE121006160X127902305127902465Ratregion
5062392BF397876161X115600212115600373Ratregion
5064316BE114401196X133815186133815382Ratregion
5064316BE114401196X133765578133765774Ratregion
5064316BE114401196X133675360133675556Ratregion
5064420BI302169182X105430215105430397Ratregion
5060100BF388493202X115844128115844330Ratregion
5061890BI294036164X115598521115598685Ratregion
5062064BF397358216X103608981103609197Ratregion
5062090BF397401234X127584237127584473Ratregion
5065140AI044873220X116395190116395411Ratregion
5065226AA996826154X135145532135145686Ratregion
5065278BE121346101X116153470116153571Ratregion
5062394BE106633150X121436008121436158Ratregion
5065500BE109132151X107370873107371024Ratregion
5064426BI302182183X106107089106107272Ratregion
5066128BE116925189X108809377108809566Ratregion
5063062BE113681170X106426400106426570Ratregion
5063114BE107180214X117181960117182174Ratregion
5064658BF399517122X104263508104263630Ratregion
5066374AU048395273X118590796118591071Ratregion
5066506AU048316228X136959180136959408Ratregion
5084348AI408836243X116327367116327610Ratregion
5086897AA852020180X135145556135145736Ratregion
5086367BF401448149X107966051107966200Ratregion
5082391AA901280179X127650284127650463Ratregion
5089861AU049407235X134223176134223411Ratregion
5089933AU049450193X103719292103719485Ratregion
5089463AU049171130X105532692105532822Ratregion
5090733AU049931176X141953020141953196Ratregion
5083725AI237704109X135305310135305419Ratregion
5083829AI599687149X107942438107942587Ratregion
5089649AU049281188X127399445127399633Ratregion
5089691AU049305157X119726206119726363Ratregion
5089735AU049332266X122269668122269934Ratregion
5084872AI171612172X116124645116124817Ratregion
5084984AI179798152X103668657103668809Ratregion
5082149BI280022171X117620601117620772Ratregion
5085543BE097744156X133470595133470751Ratregion
5085543BE097744156X133346406133346562Ratregion
5088509AU048612265X118411244118411509Ratregion
5088589AU048659156X126536618126536774Ratregion
5090343AU049694155X148249636148249791Ratregion
5090495AU049784162X107038515107038679Ratregion
5081198RH142021186X107883705107885105Ratregion
5080958RH141881190X116393852116394042Ratregion
5084640AI227702217X129070018129070235Ratregion
5082745BF390012225X132701028132701253Ratregion
5084750AI179244115X142624485142624600Ratregion
5084764AI00834292X116154493116154585Ratregion
5081615BE117640170X116339316116339486Ratregion
5083603BG381125131X132805446132805577Ratregion
5502835KLHL13187X113974248113974984Ratregion
5502837ZIC3145X136128488136128633Ratregion
55030741100001E04Rik124X128784216128784483Ratregion
5503322UniSTS:238018319X120636361120636680Ratregion
5503336UniSTS:238089279X103481126103481405Ratregion
5503210ha20280X125999885126000624Ratregion
5504004px-17e5124X135154816135154940Ratregion
5504054px-48d2169X115240001115240170Ratregion
5507741REN51965251X120977508120977759Ratregion
5507743REN51966258X120977746120978004Ratregion
5507745REN51964267X120977260120977527Ratregion
5507747REN52332218X121057921121058139Ratregion
5507749REN52504274X121095306121095580Ratregion
5507751REN52551258X121104358121104616Ratregion
5507753REN52552253X121104600121104853Ratregion
5507755REN52553262X121104812121105074Ratregion
5503569SLITRK4__5446563X142711642142712205Ratregion
5503790UniSTS:471081615X131644798131645413Ratregion
5503996px-14c7137X116106432116106569Ratregion
5504006px-1f12104X113174890113174994Ratregion
5504040px-42a6140X132996306132996446Ratregion
5504052px-50b1114X135765133135765247Ratregion
5504058px-51b11104X138630083138630187Ratregion
5504060px-58a599X126688746126688845Ratregion
5504064px-59b1213X129018187129018400Ratregion
5504740PMC86565P3295X105359006105359301Ratregion
5504238AL032586175X132233292132233467Ratregion
5505263Irs4395X105344181105344576Ratregion
5505428Ptp4a1975X137875660137876614Ratregion
5504646PMC321611P2109X132766625132766904Ratregion
5505068Agtr281X112122316112122397Ratregion
5505658UniSTS:4885321443X116292100116293543Ratregion
5505923UniSTS:496533962X112121421112122383Ratregion
5506037ATG4A150X104764338104764488Ratregion
5506296D17S895E98X109378033109378130Ratregion
5506557ODZ1_364664X121404912121405576Ratregion
5506903G47725275X137666844137667119Ratregion
5507323GDB:192504107X132766619132766896Ratregion
5501982MARC_21759-21760:1023907404:5752X116091612116092364Ratregion
5500292D20S1001100X116392481116392581Ratregion
5500332GDB:193196783X115306844115307626Ratregion
5500815stSG6336851139X121103852121104991Ratregion
5500364GDB:34215996X147240416147240512Ratregion
5500374GDB:370773206X147258915147259237Ratregion
5500495RH126553249X116088325116088574Ratregion
5503320UniSTS:238015122X116970304116970426Ratregion
5500845L7788075X132027685132027760Ratregion
5501195PMC153509P1282X112121846112122128Ratregion
5501309ECD13650587X120975484120976071Ratregion
5501233PMC162213P1777X129070251129071028Ratregion
5501540G16011149X117316169117316318Ratregion
5501247PMC166414P3170X120920962120921132Ratregion
5505114Fgf13912X137276913137277825Ratregion
5505206F9341X138394548138395225Ratregion
5502118MARC_5059-5060:996690096:1309X107589759107590068Ratregion
Position Markers

Flank 1: (DXRat98)
Rat AssemblyChrPosition (strand)Source
Rnor_5.0X122,686,596 - 122,686,899NCBI
RGSC_v3.4X9,007,287 - 9,007,589RGD
RGSC_v3.1X9,012,843 - 9,013,145RGD
SHRSP x BN MapX34.2399RGD
SHRSP x BN MapX34.2399UniSTS
FHH x ACI MapX36.86RGD
Peak: (DXRat21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X125,812,805 - 125,812,949 (+)MAPPER
Rnor_6.0X133,457,395 - 133,457,540NCBI
Rnor_5.0X133,535,321 - 133,535,466UniSTS
RGSC_v3.4X132,940,995 - 132,941,140UniSTS
RGSC_v3.4X132,940,994 - 132,941,140RGD
RGSC_v3.1X133,014,428 - 133,014,573RGD
CeleraX124,790,374 - 124,790,520UniSTS
RH 3.4 MapX861.2RGD
RH 3.4 MapX861.2UniSTS
SHRSP x BN MapX37.58UniSTS
SHRSP x BN MapX37.58RGD
FHH x ACI MapX40.46RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX112934952138400867Rat
5685004Bss104Bone structure and strength QTL 1043.9tibia area (VT:1000281)tibia area measurement (CMO:0001382)X113805422126975220Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general parental S allele was responsible for decreased cognitive performance 1581615
qtl_statistics_details social-investigatory behavior involved direct contact while sniffing, nosing, close following, pawing, grooming or inspecting the body surface 1581615