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ONTOLOGY REPORT - ANNOTATIONS


Term:B cell differentiation
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Accession:GO:0030183 term browser browse the term
Definition:The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:exact_synonym: B lymphocyte differentiation
 related_synonym: B cell development
 alt_id: GO:0042115



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B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07049134.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (MGI:3828349|PMID:17371977) RGD PMID:17371977 MGI:3828349 NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
JBrowse link
G Adgrg3 adhesion G protein-coupled receptor G3 involved_in ISO (MGI:5645196|PMID:24113187) RGD PMID:24113187 MGI:5645196 NCBI chr19:9,972,425...10,001,118
Ensembl chr19:9,972,430...10,001,123
JBrowse link
G Bcl11a BAF chromatin remodeling complex subunit BCL11A acts_upstream_of_or_within ISO MGI:2663941 (MGI:2662805|PMID:12717432) RGD PMID:12717432 MGI:2662805 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2156165 (MGI:2156164|PMID:8170972), (MGI:85476|PMID:9028316) RGD PMID:8170972 PMID:9028316 MGI:2156164 MGI:85476 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:88337 (MGI:3028360|PMID:14647274) RGD PMID:14647274 MGI:3028360 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Card11 caspase recruitment domain family, member 11 acts_upstream_of_or_within ISO MGI:3045950 (MGI:2664641|PMID:12818158) RGD PMID:12818158 MGI:2664641 NCBI chr12:13,620,979...13,758,115
Ensembl chr12:13,621,087...13,758,112
JBrowse link
G Cd40lg CD40 ligand involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96556 (MGI:3028360|PMID:14647274)
Ensembl
RGD
PMID:14647274 GO_REF:0000107 MGI:3028360 NCBI chr  X:135,127,119...135,138,302
Ensembl chr  X:135,126,969...135,138,306
JBrowse link
G Cd79a CD79a molecule involved_in IBA
ISO
PMID:21873635
(MGI:2149180|PMID:11514602), (MGI:2687348|PMID:12097390)
RGD PMID:11514602 PMID:12097390 PMID:21873635 MGI:2149180 MGI:2687348, RGD:13792537 NCBI chr 1:80,493,520...80,497,936
Ensembl chr 1:80,493,581...80,497,935
JBrowse link
G Cd79b CD79b molecule involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,239,354...91,242,500
Ensembl chr10:91,239,356...91,242,625
JBrowse link
G Cdh17 cadherin 17 involved_in ISO (MGI:3531365|PMID:15688343) RGD PMID:15688343 MGI:3531365 NCBI chr 5:25,262,820...25,314,884
Ensembl chr 5:25,262,758...25,314,884
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:1431100)
UniProt
RGD
PMID:1431100 GO_REF:0000024 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569
JBrowse link
G Clcf1 cardiotrophin-like cytokine factor 1 acts_upstream_of_or_within ISO (MGI:1346205|PMID:10500198) RGD PMID:10500198 MGI:1346205 NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
JBrowse link
G Cr2 complement C3d receptor 2 involved_in ISO (PMID:2995485) RGD PMID:2995485 NCBI chr13:106,678,579...106,716,595
Ensembl chr13:106,685,413...106,716,235
JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in ISO (MGI:5314150|PMID:22157821) RGD PMID:22157821 MGI:5314150 NCBI chr 8:107,466,229...107,540,633
Ensembl chr 8:107,474,312...107,540,627
JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO MGI:2667614 (MGI:2447929|PMID:12504013) RGD PMID:12504013 MGI:2447929 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186
JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in ISS
ISO
GO_REF:0000024
(MGI:5644772|PMID:25222125)
UniProt
RGD
PMID:25222125 GO_REF:0000024 MGI:5644772 NCBI chr 6:61,270,385...61,276,795
Ensembl chr 6:61,269,913...61,275,063
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO MGI:3813243 (MGI:3812266|PMID:18684867) RGD PMID:18684867 MGI:3812266 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,178,529
Ensembl chr 7:113,106,247...113,178,529
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO MGI:3624790 (MGI:5484711|PMID:23531880) RGD PMID:23531880 MGI:5484711 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 involved_in IBA
ISO
PMID:21873635
(MGI:4946600|PMID:21228325)
RGD PMID:21228325 PMID:21873635 MGI:4946600, RGD:13792537 NCBI chr12:7,623,658...7,699,474
Ensembl chr12:7,623,930...7,699,474
JBrowse link
G Fzd9 frizzled class receptor 9 acts_upstream_of_or_within ISO MGI:3526665 (MGI:3577530|PMID:15572594) RGD PMID:15572594 MGI:3577530 NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398
JBrowse link
G Gimap1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO MGI:2449947|MGI:4459837 (MGI:4455099|PMID:20194894) RGD PMID:20194894 MGI:4455099 NCBI chr 4:77,687,581...77,691,468
Ensembl chr 4:77,682,171...77,691,866
JBrowse link
G Gon4l gon-4 like involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000002
GO_REF:0000107
MGI:4829629 (MGI:4821908|PMID:20530203)
InterPro
Ensembl
RGD
PMID:20530203 GO_REF:0000002 GO_REF:0000107 MGI:4821908 NCBI chr 2:174,233,461...174,306,636
Ensembl chr 2:174,233,461...174,306,634
JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (MGI:5896692|PMID:28039360) RGD PMID:28039360 MGI:5896692 NCBI chr10:54,637,360...54,640,542
Ensembl chr10:54,637,455...54,640,650
JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:128,923,918...128,962,025
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2449914 (MGI:2449266|PMID:12522149) RGD PMID:12522149 MGI:2449266 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
G Ifna1 interferon, alpha 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,095,767...103,098,260
Ensembl chr 5:103,097,356...103,097,925
JBrowse link
G Ifna16l1 interferon, alpha 16-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,216,368...103,216,984 JBrowse link
G Ifna2 interferon alpha 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,258,617...103,259,195 JBrowse link
G Ifna4 interferon, alpha 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,069,483...103,070,052
Ensembl chr 5:103,069,483...103,070,052
JBrowse link
G Ifna5 interferon, alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,187,852...103,188,430 JBrowse link
G Ifnb1 interferon beta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,020,969...103,021,523
Ensembl chr 5:103,020,969...103,021,523
JBrowse link
G Ifne interferon, epsilon involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,538,001...103,627,561
Ensembl chr 5:103,569,675...103,572,256
JBrowse link
G Ifnk interferon kappa involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:49,732,073...49,734,281
Ensembl chr 5:49,732,073...49,734,281
JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in ISO MGI:1316738|MGI:6195834 (MGI:6095409|PMID:28923960) RGD PMID:28923960 MGI:6095409
G Ighg1 immunoglobulin heavy constant gamma 1 involved_in ISO MGI:1316738|MGI:6195842 (MGI:6095409|PMID:28923960) RGD PMID:28923960 MGI:6095409 Ensembl chr 6:132,389,370...132,393,397 JBrowse link
G Igkc immunoglobulin kappa constant acts_upstream_of_or_within ISO MGI:3624131 (MGI:3622844|PMID:8080841) RGD PMID:8080841 MGI:3622844
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO MGI:2158738 (MGI:5449477|PMID:23071339), (MGI:68746|PMID:7923373) RGD PMID:7923373 PMID:23071339 MGI:5449477 MGI:68746 NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416
JBrowse link
G Il9 interleukin 9 acts_upstream_of_or_within ISO MGI:96564 (MGI:6506914|PMID:30082831) RGD PMID:30082831 MGI:6506914 NCBI chr17:8,111,772...8,114,895
Ensembl chr17:8,111,772...8,114,895
JBrowse link
G Il9r interleukin 9 receptor acts_upstream_of_or_within ISO MGI:96563 (MGI:6506914|PMID:30082831) RGD PMID:30082831 MGI:6506914 NCBI chr10:15,431,706...15,444,144
Ensembl chr10:15,431,706...15,441,990
JBrowse link
G Jak3 Janus kinase 3 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:3655405|PMID:9498750)
GO_REF:0000024
RGD
BHF-UCL
PMID:9498750 PMID:21873635 GO_REF:0000024 MGI:3655405, RGD:13792537 NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G LOC100911527 interferon alpha-12-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,524,733...103,525,302
Ensembl chr 5:103,524,733...103,525,302
JBrowse link
G LOC100912314 interferon alpha-1-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,285,510...103,288,640 JBrowse link
G LOC100912356 interferon alpha-1-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,227,820...103,230,500 JBrowse link
G Lyl1 LYL1, basic helix-loop-helix family member involved_in ISS
ISO
GO_REF:0000024
(MGI:3693935|PMID:16514064)
UniProt
RGD
PMID:16514064 GO_REF:0000024 MGI:3693935 NCBI chr19:23,452,140...23,455,007
Ensembl chr19:23,452,140...23,455,007
JBrowse link
G Ms4a1 membrane spanning 4-domains A1 involved_in ISO (PMID:3925015) RGD PMID:3925015 NCBI chr 1:207,906,370...207,927,028
Ensembl chr 1:207,906,374...207,918,512
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1858055 (MGI:1275867|PMID:9697843)
Ensembl
RGD
PMID:9697843 GO_REF:0000107 MGI:1275867 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO MGI:3047076 (MGI:3763573|PMID:17927961) RGD PMID:17927961 MGI:3763573 NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 involved_in ISO (MGI:3044463|PMID:15143214) RGD PMID:15143214 MGI:3044463 NCBI chr 7:114,139,318...114,175,395
Ensembl chr 7:114,139,345...114,175,442
JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
ISS
(PMID:16439204)
GO_REF:0000024
RGD
UniProt
PMID:16439204 GO_REF:0000024 NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444
JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (MGI:2654966|PMID:12682228) RGD PMID:12682228 MGI:2654966 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO MGI:3505767 (MGI:3487180|PMID:15459109) RGD PMID:15459109 MGI:3487180 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Onecut1 one cut homeobox 1 acts_upstream_of_or_within ISO MGI:2179340 (MGI:3707632|PMID:12874218) RGD PMID:12874218 MGI:3707632 NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2149414 (MGI:1329776|PMID:9988280)
Ensembl
RGD
PMID:9988280 GO_REF:0000107 MGI:1329776 NCBI chr 2:32,878,942...32,963,611
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (MGI:1861532|PMID:10925250) RGD PMID:10925250 MGI:1861532 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Polm DNA polymerase mu acts_upstream_of_or_within ISO MGI:2179233 (MGI:3576407|PMID:15789338) RGD PMID:15789338 MGI:3576407 NCBI chr14:80,707,075...80,716,677
Ensembl chr14:80,706,345...80,717,086
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO MGI:1856024 (MGI:3640879|PMID:9300691) RGD PMID:9300691 MGI:3640879 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:1096020|PMID:9271584)
UniProt
RGD
PMID:9271584 GO_REF:0000024 MGI:1096020 NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C involved_in
acts_upstream_of_or_within
ISO (MGI:3521537|PMID:15557316), (MGI:3774343|PMID:18249142)
MGI:1857277|MGI:2181288 (MGI:1095647|PMID:9254656), (MGI:2670259|PMID:12902479), (MGI:80946|PMID:8666928)
RGD PMID:8666928 PMID:9254656 PMID:12902479 PMID:15557316 PMID:18249142 MGI:1095647 MGI:2670259 MGI:3521537 MGI:3774343 MGI:80946 NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (MGI:3774343|PMID:18249142) RGD PMID:18249142 MGI:3774343 NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G Rabl3 RAB, member of RAS oncogene family-like 3 involved_in ISO (MGI:6405642|PMID:32220963) RGD PMID:32220963 MGI:6405642 NCBI chr11:63,153,281...63,182,240
Ensembl chr11:63,152,792...63,182,671
JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within
involved_in
ISO (MGI:2178701|PMID:11976687)
(MGI:50458|PMID:1547488)
RGD PMID:1547488 PMID:11976687 MGI:2178701 MGI:50458 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within
involved_in
ISO MGI:1858556 (MGI:2179579|PMID:11980719), (MGI:3709144|PMID:14595002)
(MGI:50458|PMID:1547488), (MGI:50459|PMID:1547487)
RGD PMID:1547487 PMID:1547488 PMID:11980719 PMID:14595002 MGI:2179579 MGI:3709144 MGI:50458 MGI:50459 NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (MGI:2178898|PMID:11967543) RGD PMID:11967543 MGI:2178898 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
G RGD1560539 similar to interferon alpha 8/6 precursor; IFNa8/6 (B6) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:103,476,362...103,477,211
Ensembl chr 5:103,476,657...103,477,211
JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5790407|PMID:25613378)
UniProt
RGD
PMID:25613378 GO_REF:0000024 MGI:5790407 NCBI chr  X:116,031,896...116,034,963
Ensembl chr  X:116,031,803...116,034,967
JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:2182438 (MGI:2670314|PMID:12676787) RGD PMID:12676787 MGI:2670314 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973|MGI:3054898 (MGI:3054344|PMID:15294947), (MGI:3055645|PMID:15284856), (MGI:3655025|PMID:16797412) RGD PMID:15284856 PMID:15294947 PMID:16797412 MGI:3054344 MGI:3055645 MGI:3655025 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tnfsf13b TNF superfamily member 13b involved_in ISO MGI:2387426 (MGI:3805407|PMID:18624351) RGD PMID:18624351 MGI:3805407 NCBI chr16:79,462,406...79,492,888
Ensembl chr16:79,462,402...79,492,693
JBrowse link
G Tpd52 tumor protein D52 involved_in ISO
IBA
(PMID:15576473)
PMID:21873635
RGD PMID:15576473 PMID:21873635 RGD:13792537 NCBI chr 2:92,735,246...92,816,079
Ensembl chr 2:92,735,620...92,816,622
JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO MGI:1856914 (MGI:3640879|PMID:9300691) RGD PMID:9300691 MGI:3640879 NCBI chr 6:110,341,585...110,475,297
Ensembl chr 6:110,341,581...110,474,538
JBrowse link
G Tshr-ps1 thyroid stimulating hormone receptor, pseudogene 1 acts_upstream_of_or_within ISO MGI:1856914 (MGI:3640879|PMID:9300691) RGD PMID:9300691 MGI:3640879 NCBI chr 4:92,142,656...92,143,138 JBrowse link
G Yy1 YY1 transcription factor involved_in ISO MGI:3624790 (MGI:5484711|PMID:23531880) RGD PMID:23531880 MGI:5484711 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within ISO MGI:5300200 (MGI:5300225|PMID:22201126) RGD PMID:22201126 MGI:5300225 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3710692|PMID:17495164)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17495164 GO_REF:0000024 GO_REF:0000107 MGI:3710692 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase acts_upstream_of_or_within ISO MGI:1856317 (MGI:65977|PMID:7680896) RGD PMID:7680896 MGI:65977 NCBI chr  X:97,722,796...97,762,315
Ensembl chr  X:97,722,802...97,761,853
JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in ISO (MGI:4943414|PMID:1378867) RGD PMID:1378867 MGI:4943414 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO MGI:3510784 (MGI:4460017|PMID:20543113) RGD PMID:20543113 MGI:4460017 NCBI chr20:43,011,405...43,054,654
Ensembl chr20:43,011,450...43,054,667
JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2156165 (MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:78866 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:1857113 (MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:78866 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO MGI:1858556 (MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:78866 NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
G Tcf3 transcription factor 3 involved_in ISO
ISS
(PMID:15030778)
GO_REF:0000024
RGD
UniProt
PMID:15030778 GO_REF:0000024 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1857590 (MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:78866 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
B cell negative selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:99702 (MGI:3588597|PMID:16055554) RGD PMID:16055554 MGI:3588597 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1097161 (MGI:3588597|PMID:16055554) RGD PMID:16055554 MGI:3588597 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
B-1 B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd19 CD19 molecule involved_in ISO (MGI:74944|PMID:7543183) RGD PMID:7543183 MGI:74944 NCBI chr 1:180,987,286...180,993,920
Ensembl chr 1:180,987,286...180,993,975
JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO MGI:3639305 (MGI:3629264|PMID:14614861) RGD PMID:14614861 MGI:3629264 NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slamf8 SLAM family member 8 involved_in ISO (MGI:6215454|PMID:11313408) RGD PMID:11313408 MGI:6215454 NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211
JBrowse link
B-1a B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtm7 CKLF-like MARVEL transmembrane domain containing 7 acts_upstream_of_or_within ISO (MGI:5554324|PMID:24080084) RGD PMID:24080084 MGI:5554324 NCBI chr 8:114,448,037...114,474,958
Ensembl chr 8:114,448,042...114,474,621
JBrowse link
G Dpp4 dipeptidylpeptidase 4 IMP RGD PMID:19327106 RGD:41408336 NCBI chr 3:46,962,243...47,043,870
Ensembl chr 3:46,962,243...47,043,901
JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (MGI:2680742|PMID:14595020) RGD PMID:14595020 MGI:2680742 NCBI chr18:74,046,421...74,156,041
Ensembl chr18:74,046,904...74,156,028
JBrowse link
G Plcl2 phospholipase C-like 2 acts_upstream_of_or_within ISO MGI:2679632 (MGI:2677607|PMID:14517301) RGD PMID:14517301 MGI:2677607 NCBI chr 9:3,292,564...3,477,009
Ensembl chr 9:3,292,695...3,477,009
JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf8 interferon regulatory factor 8 involved_in ISO UniProtKB:P17433 (MGI:6303891|PMID:31000603) RGD PMID:31000603 MGI:6303891 NCBI chr19:48,790,483...48,812,363
Ensembl chr19:48,790,588...48,811,829
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386100 (MGI:2679743|PMID:12928432)
Ensembl
RGD
PMID:12928432 GO_REF:0000107 MGI:2679743 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:P23611 (MGI:6303891|PMID:31000603) RGD PMID:31000603 MGI:6303891 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117|MGI:2683027 (MGI:3619310|PMID:14607964) RGD PMID:14607964 MGI:3619310 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Cdh17 cadherin 17 involved_in ISO (MGI:3531365|PMID:15688343) RGD PMID:15688343 MGI:3531365 NCBI chr 5:25,262,820...25,314,884
Ensembl chr 5:25,262,758...25,314,884
JBrowse link
G Il21 interleukin 21 involved_in ISS
ISO
GO_REF:0000024
(MGI:5450752|PMID:23045607)
UniProt
RGD
PMID:23045607 GO_REF:0000024 MGI:5450752 NCBI chr 2:120,119,598...120,126,941
Ensembl chr 2:120,119,444...120,126,996
JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:5450752|PMID:23045607)
UniProt
RGD
PMID:23045607 GO_REF:0000024 MGI:5450752 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO UniProtKB:P17433 (MGI:6303891|PMID:31000603) RGD PMID:31000603 MGI:6303891 NCBI chr19:48,790,483...48,812,363
Ensembl chr19:48,790,588...48,811,829
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 acts_upstream_of_or_within ISO MGI:4235940 (MGI:5547463|PMID:23997217) RGD PMID:23997217 MGI:5547463 NCBI chr 4:161,684,249...161,698,315
Ensembl chr 4:161,684,249...161,698,422
JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 involved_in ISO (MGI:5450752|PMID:23045607) RGD PMID:23045607 MGI:5450752 NCBI chr 8:51,521,813...51,548,819
Ensembl chr 8:51,474,015...51,548,819
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:P23611 (MGI:6303891|PMID:31000603) RGD PMID:31000603 MGI:6303891 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
immature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fnip1 folliculin interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
ISS
MGI:5437714 (MGI:5436190|PMID:22608497)
GO_REF:0000024
RGD
UniProt
PMID:22608497 GO_REF:0000024 MGI:5436190 NCBI chr10:38,567,728...38,650,824
Ensembl chr10:38,567,729...38,650,824
JBrowse link
G Irf2bp2 interferon regulatory factor 2 binding protein 2 involved_in ISO (PMID:27016798) RGD PMID:27016798 NCBI chr19:54,559,409...54,564,714
Ensembl chr19:54,560,128...54,566,642
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (MGI:3040777|PMID:15067126) RGD PMID:15067126 MGI:3040777 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:O35906 (MGI:5926569|PMID:28062693) RGD PMID:28062693 MGI:5926569 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Spib Spi-B transcription factor involved_in ISO UniProtKB:P17433 (MGI:5926569|PMID:28062693) RGD PMID:28062693 MGI:5926569 NCBI chr 1:95,018,939...95,024,804
Ensembl chr 1:95,018,947...95,024,780
JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (MGI:6220623|PMID:29907570) RGD PMID:29907570 MGI:6220623 NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152
JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:1861796 (MGI:85481|PMID:9009202) RGD PMID:9009202 MGI:85481 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
JBrowse link
G Cdh17 cadherin 17 involved_in ISO (MGI:3531365|PMID:15688343) RGD PMID:15688343 MGI:3531365 NCBI chr 5:25,262,820...25,314,884
Ensembl chr 5:25,262,758...25,314,884
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3044313|PMID:15146182), (MGI:3838059|PMID:19217325)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15146182 PMID:19217325 GO_REF:0000024 GO_REF:0000107 MGI:3044313 MGI:3838059 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (MGI:5818419|PMID:25729399) RGD PMID:25729399 MGI:5818419 NCBI chr 9:81,843,599...82,101,540
Ensembl chr 9:81,843,604...82,101,525
JBrowse link
G Dock11 dedicator of cytokinesis 11 involved_in ISO (MGI:5818419|PMID:25729399) RGD PMID:25729399 MGI:5818419 NCBI chr  X:115,131,720...115,314,854
Ensembl chr  X:115,131,909...115,314,854
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISS
ISO
GO_REF:0000024
(MGI:3838059|PMID:19217325)
UniProt
RGD
PMID:19217325 GO_REF:0000024 MGI:3838059 NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008
JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (MGI:3838059|PMID:19217325) RGD PMID:19217325 MGI:3838059 NCBI chr 7:110,310,810...110,328,653
Ensembl chr 7:110,310,812...110,328,653
JBrowse link
G Notch2 notch receptor 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3838059|PMID:19217325)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19217325 GO_REF:0000024 GO_REF:0000107 MGI:3838059 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:1860716|PMID:10881171)
UniProt
RGD
PMID:10881171 GO_REF:0000024 MGI:1860716 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
mature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou2f2 POU class 2 homeobox 2 acts_upstream_of_or_within ISO MGI:3028896 (MGI:53043|PMID:8096198) RGD PMID:8096198 MGI:53043 NCBI chr 1:80,682,330...80,769,756
Ensembl chr 1:80,685,741...80,724,261
JBrowse link
mature B cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr183 G protein-coupled receptor 183 involved_in ISO (MGI:4352759|PMID:19597478) RGD PMID:19597478 MGI:4352759 NCBI chr15:99,037,764...99,050,550
Ensembl chr15:99,036,367...99,050,559
JBrowse link
G LOC688282 hypothetical protein LOC688282 involved_in ISO (MGI:6103709|PMID:28978694) RGD PMID:28978694 MGI:6103709 NCBI chr10:103,015,371...103,027,407
Ensembl chr10:103,016,505...103,027,407
JBrowse link
G Rag2 recombination activating 2 IMP RGD PMID:30206106 RGD:38508903 NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
memory B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (MGI:2387354|PMID:10755614) RGD PMID:10755614 MGI:2387354 NCBI chr 7:98,845,270...98,913,409
Ensembl chr 7:98,845,270...98,913,236
JBrowse link
negative regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 Fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:3623701|PMID:16618805) RGD PMID:16618805 MGI:3623701 NCBI chr12:7,623,658...7,699,474
Ensembl chr12:7,623,930...7,699,474
JBrowse link
G Hmgb3 high mobility group box 3 acts_upstream_of_or_within ISO (MGI:2670545|PMID:12714519) RGD PMID:12714519 MGI:2670545 NCBI chr  X:149,296,309...149,301,294
Ensembl chr  X:149,296,375...149,301,292
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:2384134 (MGI:3805135|PMID:18523151) RGD PMID:18523151 MGI:3805135 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in ISO
IEA
(PMID:18941195)
(MGI:3814493|PMID:18941195)
GO_REF:0000107
RGD
Ensembl
PMID:18941195 GO_REF:0000107 MGI:3814493 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
negative regulation of pre-B cell receptor expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:5444793|PMID:22949502) RGD PMID:22949502 MGI:5444793 NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807
JBrowse link
plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:2385534 (MGI:6407632|PMID:29259245) RGD PMID:29259245 MGI:6407632 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Itm2a integral membrane protein 2A acts_upstream_of_or_within ISO MGI:5645968 (MGI:5613782|PMID:24831988) RGD PMID:24831988 MGI:5613782 NCBI chr  X:72,486,383...72,492,344
Ensembl chr  X:72,486,381...72,492,363
JBrowse link
G Lgals1 galectin 1 acts_upstream_of_or_within ISO (MGI:5301217|PMID:21753146) RGD PMID:21753146 MGI:5301217 NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345
JBrowse link
G Lgals8 galectin 8 acts_upstream_of_or_within ISO (MGI:5301217|PMID:21753146) RGD PMID:21753146 MGI:5301217 NCBI chr17:58,024,652...58,052,764
Ensembl chr17:58,028,105...58,052,764
JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (MGI:1888604|PMID:10926756) RGD PMID:10926756 MGI:1888604 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
JBrowse link
positive regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (MGI:5002406|PMID:21423173) RGD PMID:21423173 MGI:5002406 NCBI chr  X:138,564,459...138,752,116
Ensembl chr  X:138,565,836...138,751,204
JBrowse link
G Bad BCL2-associated agonist of cell death acts_upstream_of_or_within ISO MGI:3029528 (MGI:3029504|PMID:12431371) RGD PMID:12431371 MGI:3029504 NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
JBrowse link
G Cd27 CD27 molecule involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:158,030,700...158,035,862
Ensembl chr 4:158,030,703...158,035,592
JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO MGI:2429736 (MGI:1095961|PMID:9252128) RGD PMID:9252128 MGI:1095961 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823
JBrowse link
G Il7 interleukin 7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3655025|PMID:16797412)
Ensembl
RGD
PMID:16797412 GO_REF:0000107 MGI:3655025 NCBI chr 2:94,235,219...94,280,075
Ensembl chr 2:94,234,766...94,280,075
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386884 (MGI:1266928|PMID:9620849), (MGI:1354084|PMID:10704460)
Ensembl
RGD
PMID:9620849 PMID:10704460 GO_REF:0000107 MGI:1266928 MGI:1354084 NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISS
ISO
GO_REF:0000024
(MGI:5013661|PMID:21572390)
UniProt
RGD
PMID:21572390 GO_REF:0000024 MGI:5013661 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
ISO
GO_REF:0000024
(MGI:3818191|PMID:19015308)
UniProt
RGD
PMID:19015308 GO_REF:0000024 MGI:3818191 NCBI chr 7:134,577,443...134,622,934
Ensembl chr 7:134,577,482...134,622,934
JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (MGI:4839685|PMID:20870947) RGD PMID:20870947 MGI:4839685 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712
JBrowse link
G Ppp2r3c protein phosphatase 2, regulatory subunit B'', gamma involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3759678 (MGI:3589325|PMID:16129705)
RGD PMID:16129705 PMID:21873635 MGI:3589325, RGD:13792537 NCBI chr 6:72,647,025...72,670,885
Ensembl chr 6:72,647,025...72,672,491
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO (MGI:3826899|PMID:18845144) RGD PMID:18845144 MGI:3826899 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (MGI:1889695|PMID:10979977) RGD PMID:10979977 MGI:1889695 NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103036 (MGI:1889695|PMID:10979977)
Ensembl
RGD
PMID:10979977 GO_REF:0000107 MGI:1889695 NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
MGI:1857421|MGI:2384078 (MGI:77314|PMID:7477352), (MGI:77315|PMID:7477353)
(PMID:18369315)
Ensembl
RGD
PMID:7477352 PMID:7477353 PMID:18369315 PMID:21873635 GO_REF:0000107 MGI:77314 MGI:77315, RGD:13792537 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
ISS
(PMID:11460154)
GO_REF:0000024
RGD
UniProt
PMID:11460154 GO_REF:0000024 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 acts_upstream_of ISO UniProtKB:P60568 (PMID:22962438) RGD PMID:22962438 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO UniProtKB:P22301 (PMID:22962438) RGD PMID:22962438 NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
ISS
IEA
(PMID:11460154)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:11460154 GO_REF:0000024 GO_REF:0000107 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
pre-B cell allelic exclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (MGI:3848557|PMID:19448632) RGD PMID:19448632 MGI:3848557 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Rag1 recombination activating 1 involved_in IBA
ISO
PMID:21873635
(MGI:3848557|PMID:19448632)
RGD PMID:19448632 PMID:21873635 MGI:3848557, RGD:13792537 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rag2 recombination activating 2 involved_in ISO (MGI:3848557|PMID:19448632) RGD PMID:19448632 MGI:3848557 NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
pre-B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (MGI:5002406|PMID:21423173) RGD PMID:21423173 MGI:5002406 NCBI chr  X:138,564,459...138,752,116
Ensembl chr  X:138,565,836...138,751,204
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (MGI:2179980|PMID:9028339), (MGI:74794|PMID:7795661) RGD PMID:7795661 PMID:9028339 MGI:2179980 MGI:74794 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:3711150 (MGI:3662963|PMID:16819554) RGD PMID:16819554 MGI:3662963 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:13,509,577...13,537,174
Ensembl chr 3:13,510,513...13,536,202
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3619065|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO MGI:2676844|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
JBrowse link
regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (MGI:5800654|PMID:27010503) RGD PMID:27010503 MGI:5800654 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
JBrowse link
G Card11 caspase recruitment domain family, member 11 acts_upstream_of_or_within ISO MGI:3039682 (MGI:3039643|PMID:12867038) RGD PMID:12867038 MGI:3039643 NCBI chr12:13,620,979...13,758,115
Ensembl chr12:13,621,087...13,758,112
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (MGI:2179980|PMID:9028339), (MGI:74794|PMID:7795661) RGD PMID:7795661 PMID:9028339 MGI:2179980 MGI:74794 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO MGI:3664438 (MGI:3656194|PMID:16501569) RGD PMID:16501569 MGI:3656194 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658
JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (MGI:1307021|PMID:9806640) RGD PMID:9806640 MGI:1307021 NCBI chr10:83,460,564...83,553,591
Ensembl chr10:83,465,745...83,553,591
JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO MGI:3763431 (MGI:3763573|PMID:17927961) RGD PMID:17927961 MGI:3763573 NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 acts_upstream_of_or_within ISO (MGI:3044463|PMID:15143214) RGD PMID:15143214 MGI:3044463 NCBI chr 7:114,139,318...114,175,395
Ensembl chr 7:114,139,345...114,175,442
JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856074 (MGI:1095647|PMID:9254656)
Ensembl
RGD
PMID:9254656 GO_REF:0000107 MGI:1095647 NCBI chr 4:157,526,034...157,550,783
Ensembl chr 4:157,526,035...157,550,984
JBrowse link
G Slamf8 SLAM family member 8 involved_in ISO
IBA
(MGI:6215454|PMID:11313408)
PMID:21873635
RGD PMID:11313408 PMID:21873635 MGI:6215454, RGD:13792537 NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211
JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO (PMID:23857366) RGD PMID:23857366 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5779430|PMID:27102483)
UniProt
RGD
PMID:27102483 GO_REF:0000024 MGI:5779430 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO
IEA
(MGI:5779430|PMID:27102483)
GO_REF:0000107
RGD
Ensembl
PMID:27102483 GO_REF:0000107 MGI:5779430 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
JBrowse link
transitional one stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2153718 (MGI:3839222|PMID:19228876) RGD PMID:19228876 MGI:3839222 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
transitional two stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO MGI:3510784 (MGI:4460017|PMID:20543113) RGD PMID:20543113 MGI:4460017 NCBI chr20:43,011,405...43,054,654
Ensembl chr20:43,011,450...43,054,667
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    immune system process 2869
      leukocyte activation 1078
        lymphocyte activation 893
          lymphocyte differentiation 427
            B cell differentiation 158
              B cell lineage commitment + 6
              B cell selection + 5
              immature B cell differentiation + 22
              mature B cell differentiation + 37
              negative regulation of B cell differentiation + 4
              positive regulation of B cell differentiation + 17
              regulation of B cell differentiation + 33
Path 2
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        multicellular organism development 5773
          system development 5413
            animal organ development 4174
              hematopoietic or lymphoid organ development 1046
                hemopoiesis 994
                  leukocyte differentiation 621
                    mononuclear cell differentiation 480
                      lymphocyte differentiation 427
                        B cell differentiation 158
                          B cell lineage commitment + 6
                          B cell selection + 5
                          immature B cell differentiation + 22
                          mature B cell differentiation + 37
                          negative regulation of B cell differentiation + 4
                          positive regulation of B cell differentiation + 17
                          regulation of B cell differentiation + 33
paths to the root