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Gene: Vnn1 (vanin 1) Rattus norvegicus
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Symbol: Vnn1
Name: vanin 1
RGD ID: 1310075
Description: Predicted to have pantetheine hydrolase activity. Predicted to be involved in several processes, including negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway; pantothenate metabolic process; and positive regulation of T cell differentiation in thymus. Orthologous to human VNN1 (vanin 1); PARTICIPATES IN pantothenic acid metabolic pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC114385; pantetheinase; Tiff66
Orthologs:
Homo sapiens (human) : VNN1 (vanin 1)  HGNC  Alliance
Mus musculus (house mouse) : Vnn1 (vanin 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vnn1 (vanin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100978332 (pantetheinase)
Canis lupus familiaris (dog) : VNN1 (vanin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vnn1 (vanin 1)
Sus scrofa (pig) : VNN1 (vanin 1)
Heterocephalus glaber (naked mole-rat) : Vnn1 (vanin 1)
more info ...
Allele / Splice: Vnn1em2Mcwi   Vnn1em1Mcwi  
Genetic Models: SS-Vnn1em1Mcwi SS-Vnn1em2Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0122,614,832 - 22,625,134 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl122,614,783 - 22,625,204 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0124,089,365 - 24,099,667 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4122,087,290 - 22,097,592 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1122,090,508 - 22,100,537 (-)NCBI
Celera120,280,201 - 20,290,503 (-)NCBICelera
Cytogenetic Map1p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Vnn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310075
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.