Prcr2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Prcr2 (Prostate cancer resistance QTL 2) Rattus norvegicus

Symbol: Prcr2
Name: Prostate cancer resistance QTL 2
RGD ID: 1558642
Previously known as: Pcr2
Trait: prostate integrity trait   (VT:0010571)    
Measurement Type: area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio   (CMO:0000899)    
LOD Score: 4.3
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8110,379,492 - 55,379,492RGD_MAPPER_PIPELINE
mRatBN7.2120,763,158 - 44,095,856RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0121,812,623 - 44,409,802RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0123,292,314 - 45,739,646RGDRnor5.0
RGSC_v3.4121,288,064 - 38,490,502RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: ACI/SegHsd F344/Jcl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain
ACI/SegHsd  (IEA)
F344/Jcl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Linkage and microarray analyses of susceptibility genes in ACI/Seg rats: a model for prostate cancers in the aged. Yamashita S, etal., Cancer Res 2005 Apr 1;65(7):2610-6.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41021964Trnaa-agc27transfer RNA alanine (anticodon AGC) 2711047307110473151Rat
6486936C1h3orf38similar to human chromosome 3 open reading frame 3811050420410505215Rat
402351288LOC134484949uncharacterized LOC13448494911054286010546150Rat
1308551Adgrg6adhesion G protein-coupled receptor G611063300410774685Rat
11430648LOC108349488uncharacterized LOC10834948811079687710804220Rat
1305031Vta1vesicle trafficking 111085296610900764Rat
9117395LOC103690921uncharacterized LOC10369092111090079710939497Rat
1598009Gje1gap junction protein, epsilon 111090589010911800Rat
3181Nmbrneuromedin B receptor11094247610966174Rat
41355366LOC120100430small nucleolar RNA SNORA1711120359811203728Rat
7687370LOC102552144uncharacterized LOC10255214411150418211562440Rat
7594200LOC102552210uncharacterized LOC10255221011164498311845455Rat
11426093LOC108349489uncharacterized LOC10834948911184532511876761Rat
402299001LOC134484950uncharacterized LOC13448495011189981511939137Rat
40971154LOC120100212U7 small nuclear RNA11219742712197491Rat
41277239LOC120100214U7 small nuclear RNA11219923812199299Rat
41275469LOC120100489U2 spliceosomal RNA11246432412464443Rat
7576411LOC102552459uncharacterized LOC10255245911260168112665478Rat
41195942LOC120098787uncharacterized LOC12009878711266543412707514Rat
7653582LOC102546491uncharacterized LOC10254649111364259413908695Rat
41057305LOC120098788uncharacterized LOC12009878811372501613738584Rat
7620758LOC102546604uncharacterized LOC10254660411389403013927091Rat
402443682LOC134484951uncharacterized LOC13448495111393682713942097Rat
7546851LOC102546831uncharacterized LOC10254683111398982814108154Rat
11357155LOC108349492uncharacterized LOC10834949211404741414056689Rat
11364909LOC108349493uncharacterized LOC10834949311407939614097055Rat
41261577LOC120098791uncharacterized LOC12009879111409957514105907Rat
620112Cited2Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 211413230314134746Rat
402135697LOC134484952uncharacterized LOC13448495211416145714164953Rat
402104859LOC134484954uncharacterized LOC13448495411421475914217509Rat
402059170LOC134484953uncharacterized LOC13448495311421741514221126Rat
1307979Txlnbtaxilin beta11422464714269837Rat
41289337LOC120098792developmental pluripotency-associated protein 5A-like11425836614262812Rat
1586115Hsp90aa1-ps2heat shock protein 90 alpha family class A member 1, pseudogene 211431404714316439Rat
1304818Hecahdc homolog, cell cycle regulator11434530614395226Rat
1583256AbraclABRA C-terminal like11447480214484992Rat
1307131Reps1RALBP1 associated Eps domain containing 111451758914595404Rat
9246970Ect2lepithelial cell transforming 2 like11459472614677321Rat
1310326Ccdc28acoiled-coil domain containing 28A11467745114692729Rat
7709341LOC102549233uncharacterized LOC10254923311469277514709801Rat
7676044LOC102549339uncharacterized LOC10254933911474344714767421Rat
1308124Nhsl1NHS-like 111477587415008327Rat
40936004LOC120100161U6 spliceosomal RNA11488761814887724Rat
1311553Hebp2heme binding protein 211501472915021523Rat
402287474LOC134482570large ribosomal subunit protein eL29-like11503767115037973Rat
1309903Arfgef3ARFGEF family member 311505857415223742Rat
1560303Smokl1sperm motility kinase like 111526258815273828Rat
1310294Perpp53 apoptosis effector related to PMP2211536178415374230Rat
11404601LOC10834876960S ribosomal protein L7a pseudogene11547752115478313Rat
402004241LOC134482579uncharacterized LOC13448257911548286615496313Rat
1589275Tnfaip3TNF alpha induced protein 311552892115543993Rat
41312817LOC120098793uncharacterized LOC12009879311558747715591538Rat
1586113Rpl10a-ps13ribosomal protein L10A, pseudogene 1311560018915600938Rat
7505831LOC102550206uncharacterized LOC10255020611561659915658121Rat
11452393LOC10834972640S ribosomal protein S6 pseudogene11568761015688371Rat
402396828LOC134484955uncharacterized LOC13448495511575454715776430Rat
41133462LOC120098794uncharacterized LOC12009879411578255215798676Rat
41195287Rps2-ps34ribosomal protein S2, pseudogene 3411588999215890730Rat
1305997Olig3oligodendrocyte transcription factor 311590088115902953Rat
41340848LOC120098795uncharacterized LOC12009879511591995415939101Rat
1586112Cptp-ps1ceramide-1-phosphate transfer protein, pseudogene 111595182515957969Rat
402007608LOC134484956uncharacterized LOC13448495611602963016031724Rat
40969921LOC120098796uncharacterized LOC12009879611604020816062329Rat
402258840LOC134484957uncharacterized LOC13448495711607131016138433Rat
41183496Sub1-ps3SUB1 regulator of transcription, pseudogene 311608417416084922Rat
620570Ifngr1interferon gamma receptor 111615281116171439Rat
1303169Il22ra2interleukin 22 receptor subunit alpha 211617223816228009Rat
402109829LOC134482580uncharacterized LOC13448258011617603016267517Rat
1307335Il20rainterleukin 20 receptor subunit alpha11624368316313229Rat
41286023LOC120098799uncharacterized LOC12009879911627313816277879Rat
41158208LOC120097186uncharacterized LOC12009718611631364316331673Rat
7601783LOC10254760460S ribosomal protein L27a-like11631452916484729Rat
401988812LOC134482581uncharacterized LOC13448258111635051316354260Rat
1309428Slc35d3solute carrier family 35, member D311638930816392780Rat
1308483Pex7peroxisomal biogenesis factor 711640231916466304Rat
402351704LOC134484851uncharacterized LOC13448485111649091616494219Rat
7605452LOC102547411uncharacterized LOC10254741111650030716505378Rat
1306565Map3k5mitogen-activated protein kinase kinase kinase 511650538716723899Rat
41348685LOC120100374small nucleolar RNA SNORA42/SNORA80 family11664816316648297Rat
7499806LOC102547350uncharacterized LOC10254735011664934816664878Rat
1308866Map7microtubule-associated protein 711673000016857173Rat
41107286LOC120098800uncharacterized LOC12009880011684520916845835Rat
41005445LOC120098801uncharacterized LOC12009880111685710016866373Rat
41175611LOC120100154U6 spliceosomal RNA11688688516886991Rat
1309704Bclaf1BCL2-associated transcription factor 111690457216937106Rat
6494892Mtfr2mitochondrial fission regulator 211694281416958218Rat
621016Pde7bphosphodiesterase 7B11699407217312828Rat
402175528LOC134484964uncharacterized LOC13448496411712060017132733Rat
402281756LOC134484963uncharacterized LOC13448496311719618117214965Rat
402126815LOC134484962histidine-rich glycoprotein-like11724331317285180Rat
41198301LOC120098802uncharacterized LOC12009880211738274917398567Rat
41331278LOC120100369small nucleolar RNA SNORA4111749871717498857Rat
1303040Ahi1Abelson helper integration site 111758085917711775Rat
1560020MybMYB proto-oncogene, transcription factor11775930917793306Rat
402395605LOC134484959uncharacterized LOC13448495911777761117811483Rat
402090486LOC134484958uncharacterized LOC13448495811787977517886528Rat
402248002LOC134484960uncharacterized LOC13448496011790770817911949Rat
1308509Hbs1lHBS1-like translational GTPase11791213917989651Rat
402398884LOC134484961uncharacterized LOC13448496111793947517956912Rat
41024257Rpl23a-ps3ribosomal protein L23a, pseudogene 311798243717983048Rat
1590218Aldh8a1aldehyde dehydrogenase 8 family, member A111800350718022952Rat
402375978LOC134484852protein LEG1 homolog11805195918069868Rat
41312082LOC120100169U6 spliceosomal RNA11806309418063197Rat
1560849Themisthymocyte selection associated11825113618483851Rat
11363865LOC10834900860S ribosomal protein L7a pseudogene11835550518356348Rat
7744936Amn1-ps1antagonist of mitotic exit network 1, pseudogene 111835686518357343Rat
41228825Atg4b-ps1autophagy related 4B, cysteine peptidase, pseudogene 111837289918378259Rat
41078939LOC120098804uncharacterized LOC12009880411854365218557385Rat
619706Ptprkprotein tyrosine phosphatase, receptor type, K11855709119056297Rat
41177791LOC120098806uncharacterized LOC12009880611859963718621711Rat
402416755LOC134484965uncharacterized LOC13448496511865967218697041Rat
41357357LOC120098805uncharacterized LOC12009880511870389318709227Rat
402430504LOC134484966uncharacterized LOC13448496611871283118735324Rat
1589061Rplp0-ps4ribosomal protein lateral stalk subunit P0, pseudogene 411917706119177946Rat
1586110Ruvbl1-ps2RuvB-like AAA ATPase 1, pseudogene 211933894419341162Rat
1308889Lama2laminin subunit alpha 211949212620140056Rat
41325772LOC120100129U6 spliceosomal RNA11957991619580022Rat
41248032Npm1-ps5nucleophosmin 1, pseudogene 511982628619826954Rat
41314157LOC120098807uncharacterized LOC12009880712006517820136930Rat
41071539LOC120100143U6 spliceosomal RNA12014753920147645Rat
1305053Arhgap18Rho GTPase activating protein 1812022294820456827Rat
9075724LOC103690928U6 snRNA-associated Sm-like protein LSm5 pseudogene12028570320289293Rat
41104967LOC120097699cytochrome b-c1 complex subunit 10-like12057099420571292Rat
1598314Rbs10l2ribosomal protein S10 like 212076760220927513Rat
1305474L3mbtl3L3MBTL histone methyl-lysine binding protein 312080767920908609Rat
1587834Samd3sterile alpha motif domain containing 312092012920967595Rat
2321467Tpt1l3tumor protein, translationally-controlled 1 like 312092684520927580Rat
1564024Tmem200atransmembrane protein 200A12114250021242022Rat
41146272Rnu11-3RNA, U11 small nuclear 312120076521200898Rat
1559962Hmgb2-ps6high mobility group box 2, pseudogene 612122848421229582Rat
41302774LOC120098808uncharacterized LOC12009880812141520621426038Rat
402102575LOC134482582uncharacterized LOC13448258212149742921503768Rat
1586689Calm1-ps2calmodulin 1, pseudogene 212152962921530330Rat
11385252Rpl36a-ps9ribosomal protein L36A, pseudogene 912157412221574500Rat
1586664Smlr1small leucine-rich protein 112165672021678232Rat
402453189LOC134482583uncharacterized LOC13448258312166350121673545Rat
1563977Epb41l2erythrocyte membrane protein band 4.1-like 212168233621857106Rat
7511531LOC102552728uncharacterized LOC10255272812189756421907037Rat
1303071Akap7A-kinase anchoring protein 712190650322168663Rat
2321841Ccnb2-ps2cyclin B2, pseudogene 212191903421920538Rat
41067050LOC120100438small nucleolar RNA SNORA1712193906721939190Rat
1589982Ahcy-ps10adenosylhomocysteinase, pseudogene 1012214000422141387Rat
402044835LOC134484967uncharacterized LOC13448496712220782422248385Rat
41043647LOC120100398U2 spliceosomal RNA12228982522289973Rat
2150Arg1arginase 112229509322307720Rat
1307671Med23mediator complex subunit 2312230961322377745Rat
41183125LOC120098836uncharacterized LOC12009883612238077022384448Rat
708511Enpp3ectonucleotide pyrophosphatase/phosphodiesterase 312238271722454324Rat
7532311LOC102553363uncharacterized LOC10255336312245403522483167Rat
402006779LOC134484968uncharacterized LOC13448496812247419922482522Rat
628825Enpp1ectonucleotide pyrophosphatase/phosphodiesterase 112251805122583044Rat
621392Ccn2cellular communication network factor 212262149822624614Rat
7624072LOC102553457uncharacterized LOC10255345712263456122761849Rat
402270126LOC134484969uncharacterized LOC13448496912270778422720396Rat
7650092LOC102553526uncharacterized LOC10255352612274943622754452Rat
1593146Mrpl30-ps10mitochondrial ribosomal protein L30, pseudogene 1012288752622888085Rat
1310033Moxd1monooxygenase, DBH-like 112289454322984599Rat
11437209Rpl36a-ps17ribosomal protein L36A, pseudogene 1712293889822939560Rat
402447334LOC134484971uncharacterized LOC13448497112297028622973953Rat
619747Stx7syntaxin 712301633023056579Rat
11437431LOC108349187uncharacterized LOC10834918712305657323062960Rat
11452897Rps29-ps21ribosomal protein S29, pseudogene 2112308102723081361Rat
631383Taar9trace amine-associated receptor 912309422523095241Rat
631390Taar8ctrace amine-associated receptor 8C12310760123110321Rat
631386Taar8btrace amine-associated receptor 8B12312221423126739Rat
631391Taar8atrace amine associated receptor 8A12315201323153137Rat
1594397Taar7i-pstrace amine associated receptor 7i, pseudogene12317195823173024Rat
631385Taar7htrace amine-associated receptor 7h12319274323193819Rat
631388Taar7gtrace amine-associated receptor 7g12320661023207686Rat
631393Taar7f-pstrace amine-associated receptor 7f, pseudogene12321492623215814Rat
631394Taar7etrace-amine-associated receptor 7e12322096423222040Rat
631395Taar7dtrace-amine-associated receptor 7d12322857323229649Rat
1359258Taar7ctrace amine-associated receptor 7C12324861223249688Rat
631392Taar7btrace amine-associated receptor 7b12326007823261154Rat
631387Taar7atrace amine-associated receptor 7a12327017723271253Rat
631384Taar6trace amine-associated receptor 612327771723278754Rat
1359185Taar5trace amine-associated receptor 512328916323290176Rat
402111445LOC134484972uncharacterized LOC13448497212329603023307894Rat
631382Taar4trace amine-associated receptor 412330028823301331Rat
1359566Taar3trace amine-associated receptor 312331077623311804Rat
1311240Taar2trace amine associated receptor 212331952623323495Rat
621621Taar1trace-amine-associated receptor 112333697823337976Rat
402237682LOC134484973uncharacterized LOC13448497312334822523351635Rat
1310075Vnn1vanin 112335632423366629Rat
1560609Vnn3vanin 312339059623402858Rat
1306962Slc18b1solute carrier family 18 member B112344746223490043Rat
6499508LOC100910237uncharacterized LOC10091023712349916123499889Rat
62024Rps12ribosomal protein S1212349994323502234Rat
41042371Snord101small nucleolar RNA, C/D box 10112350077823500851Rat
41230696Snord100small nucleolar RNA, C/D box 10012350149023501564Rat
402127150LOC134478798small nucleolar RNA SNORA3312350182423501950Rat
9302186LOC103690933uncharacterized LOC10369093312351542323573616Rat
402257688LOC134484970uncharacterized LOC13448497012363383723641220Rat
11365258LOC108349443uncharacterized LOC10834944312366515223689609Rat
7579399LOC102554376uncharacterized LOC10255437612398774423991392Rat
1307099Eya4EYA transcriptional coactivator and phosphatase 412399143124235132Rat
402024523LOC134482584uncharacterized LOC13448258412414820524154113Rat
40933802LOC120098871uncharacterized LOC12009887112415741224170219Rat
7678966LOC102555465uncharacterized LOC10255546512439573724413889Rat
620523Tcf21transcription factor 2112452049924523358Rat
41115603LOC120098885uncharacterized LOC12009888512456929624596838Rat
1597456Tbpl1TATA-box binding protein like 112459702824622445Rat
1310175Slc2a12solute carrier family 2 member 1212462355824683577Rat
7630698LOC102555830uncharacterized LOC10255583012469356124696513Rat
402019573LOC134482585uncharacterized LOC13448258512469754224703299Rat
3668Sgk1serum/glucocorticoid regulated kinase 112479939124916886Rat
11368884LOC108349236uncharacterized LOC10834923612491691224932477Rat
402173011LOC134482586uncharacterized LOC13448258612493998824951974Rat
41261521LOC120100131U6 spliceosomal RNA12495050524950611Rat
41077590LOC120098893uncharacterized LOC12009889312495219725001590Rat
113875701700020N01RiklRIKEN cDNA 1700020N01 gene like12508130425214458Rat
11512463LOC108349469uncharacterized LOC10834946912512133425134929Rat
402361434LOC134484974uncharacterized LOC13448497412520862725210667Rat
41124938LOC120100484small nucleolar RNA U1312521948025219585Rat
11414134LOC108348899uncharacterized LOC10834889912530733625312429Rat
7583283LOC102546868uncharacterized LOC10254686812534963525352380Rat
1587386Fth1-ps4ferritin heavy chain 1, pseudogene 412545719925458104Rat
1306801Clvs2clavesin 212555398125661806Rat
9257174LOC103690942solute carrier family 2, facilitated glucose transporter member 3 pseudogene12561777225618817Rat
1586108Zbed4-ps1zinc finger, BED-type containing 4, pseudogene 112572167925725504Rat
619856Trdntriadin12577476526230069Rat
402127168LOC134485272succinate dehydrogenase assembly factor 3, mitochondrial-like12605409226066862Rat
402102560LOC134484853uncharacterized LOC13448485312626988926275338Rat
41235294Trnaa-agc77transfer RNA alanine (anticodon AGC) 7712640879426408874Rat
402098827LOC134484975uncharacterized LOC13448497512643962226443237Rat
7740967Nkain2sodium/potassium transporting ATPase interacting 212648838127696134Rat
41332180Trnav-cac7transfer RNA valine (anticodon CAC) 712694555326945633Rat
40938986Rnu6-1001RNA, U6 small nuclear 100112701589427016000Rat
40964934LOC120100455small nucleolar RNA SNORA1712708402227084124Rat
11496872LOC10834907140S ribosomal protein S27-like12710493427158377Rat
40941038Rnu4-5RNA, U4 small nuclear 512726498827265069Rat
1594836Dr1-ps1down-regulator of transcription 1, pseudogene 112746854427469303Rat
1306836Rnf217ring finger protein 21712783574127927805Rat
402114223LOC134484976uncharacterized LOC13448497612794679327952456Rat
1594796Tpd52l1TPD52 like 112799111428109767Rat
1307562Hddc2HD domain containing 212810066928133008Rat
402023717LOC134484854uncharacterized LOC13448485412830028828301373Rat
1586106Sec24c-ps2SEC24 homolog C, COPII coat complex component, pseudogene 212853283228535705Rat
1586105Hnrnpa1-ps43heterogeneous nuclear ribonucleoprotein A1, pseudogene 4312857644128577514Rat
621405Hey2hes-related family bHLH transcription factor with YRPW motif 212864110028651187Rat
11415566Trnae-cuc1transfer RNA glutamic acid (anticodon CUC) 112866538728665458Rat
1566426Ncoa7nuclear receptor coactivator 712867461428835891Rat
621603Hint3histidine triad nucleotide binding protein 312885486028864723Rat
727798Trmt11tRNA methyltransferase 11 homolog12887336128928679Rat
402275088LOC134482587uncharacterized LOC13448258712893629628980983Rat
1586034Dnaja4-ps1DnaJ heat shock protein family (Hsp40) member A4, pseudogene 112915091229152614Rat
1593465Cenpwcentromere protein W12935393929359109Rat
41274044LOC120100449small nucleolar RNA SNORA1712944762729447749Rat
11398775LOC10834850860S ribosomal protein L7a pseudogene12948119529484020Rat
41030689LOC120100112U4 spliceosomal RNA12957093529571078Rat
41327994LOC120097700uncharacterized LOC12009770012961599129617787Rat
402088131LOC134484977uncharacterized LOC13448497712962072929624548Rat
1586104Hdac1-ps17Histone deacetylase 1, pseudogene 1712983870929839556Rat
1563246Rspo3R-spondin 313011252930197267Rat
41224548Hnrnpa1-ps23heterogeneous nuclear ribonucleoprotein A1, pseudogene 2313021128030215461Rat
1306482Rnf146ring finger protein 14613028668030304367Rat
1359654Echdc1ethylmalonyl-CoA decarboxylase 113030496830355957Rat
11465027Leg1-ps1liver enriched gene 1, pseudogene 113039981630412621Rat
7636033Arf1-ps5ADP-ribosylation factor 1, pseudogene 513042572430429937Rat
1307525Kiaa0408LKiaa0408-like13044420230469195Rat
11479453Mtcl3MTCL family member 313046969830530205Rat
41092469LOC120100446small nucleolar RNA SNORA1713057023830570353Rat
1311933Leg1liver enriched gene 113062850130644590Rat
7746808Zfpl2zinc finger protein like 213069489530704124Rat
6494479Zfp502zinc finger protein 50213071297430737956Rat
1589918Bcl2l13-ps1Bcl2-like 13, pseudogene 113072129830729765Rat
1565215Rpl26-ps2ribosomal protein L26, pseudogene 213074652730747010Rat
1564978Lrrc14bleucine rich repeat containing 14B13074810330754236Rat
735106Ccdc127coiled-coil domain containing 12713075701030764473Rat
621557Sdhasuccinate dehydrogenase complex flavoprotein subunit A13076455330789523Rat
41092135Eif1-ps5eukaryotic translation initiation factor 1, pseudogene 513077282830773164Rat
1311239Pdcd6programmed cell death 613079510530810771Rat
1559857Ahrraryl-hydrocarbon receptor repressor13082221930917251Rat
402370709LOC134485273dynein axonemal assembly factor 8-like13088913430890962Rat
11446120LOC108349507uncharacterized LOC10834950713090741430912962Rat
621790Exoc3exocyst complex component 313091987130950624Rat
3720Slc9a3solute carrier family 9 member A313095321530996209Rat
1566336Cep72centrosomal protein 7213105388431083863Rat
1310121Tppptubulin polymerization promoting protein13108568031109703Rat
1564281Zdhhc11zinc finger, DHHC-type containing 1113112490031156075Rat
401994212LOC134484978uncharacterized LOC13448497813115560931156693Rat
1307359Brd9bromodomain containing 913115854631185812Rat
1308516Trip13thyroid hormone receptor interactor 1313118570031230638Rat
41220638LOC120100379small nucleolar RNA SNORA2113119583431195971Rat
1311459Nkd2NKD inhibitor of WNT signaling pathway 213126885631299390Rat
1359672Slc12a7solute carrier family 12 member 713130124331382825Rat
1594328Slc6a19solute carrier family 6 member 1913141474431434932Rat
69352Slc6a18solute carrier family 6 member 1813143657731450478Rat
9078384LOC103690946activated RNA polymerase II transcriptional coactivator p15 pseudogene13145866731465643Rat
70494Terttelomerase reverse transcriptase13146576631488650Rat
1307896Clptm1lCLPTM1-like13149609431512148Rat
402441314LOC134484979uncharacterized LOC13448497913153174231546900Rat
3715Slc6a3solute carrier family 6 member 313153799031578962Rat
1311599Lpcat1lysophosphatidylcholine acyltransferase 113159462131644946Rat
41201839LOC120098986uncharacterized LOC12009898613173187731753237Rat
1306375Mrpl36mitochondrial ribosomal protein L3613179402531797446Rat
1584802Ndufs6NADH:ubiquinone oxidoreductase subunit S613179740031805965Rat
41050934LOC120098989uncharacterized LOC12009898913180979231821362Rat
1309309Irx4iroquois homeobox 413185910131868089Rat
402281261LOC134484980uncharacterized LOC13448498013186862231875368Rat
41095055LOC120097701uncharacterized LOC12009770113198648831988765Rat
1309834Irx2iroquois homeobox 213248951232494930Rat
7681875LOC102553527uncharacterized LOC10255352713292677232937282Rat
402299746LOC134484981uncharacterized LOC13448498113293382432952874Rat
402299509LOC134484855uncharacterized LOC13448485513298240532993421Rat
40955162LOC120098992uncharacterized LOC12009899213300628133022365Rat
1590841Rpl10a-ps11ribosomal protein L10A, pseudogene 1113303146133032016Rat
1309060Irx1iroquois homeobox 113312312233128951Rat
41057629LOC120098995uncharacterized LOC12009899513322283533224638Rat
402125639LOC134484856uncharacterized LOC13448485613343102533432929Rat
401988452LOC134484857uncharacterized LOC13448485713347709833481723Rat
11375087LOC108349508uncharacterized LOC10834950813400094534021985Rat
1310046Adamts16ADAM metallopeptidase with thrombospondin type 1 motif, 1613425889934388952Rat
402123207LOC134484983uncharacterized LOC13448498313431397034316718Rat
402404915LOC134484982uncharacterized LOC13448498213437646434381325Rat
41053469LOC120097702uncharacterized LOC12009770213443728634441500Rat
1309747Ice1interactor of little elongation complex ELL subunit 113446883934508346Rat
11364129LOC10834973040S ribosomal protein S20 pseudogene13458323134590318Rat
402191285LOC134484858uncharacterized LOC13448485813492847334965223Rat
41091493LOC120100435small nucleolar RNA SNORA1713493957534939701Rat
1583609Dlat-ps1dihydrolipoamide S-acetyltransferase, pseudogene 113505964735061656Rat
41042088LOC120099033uncharacterized LOC12009903313507331935116312Rat
11451513LOC108349392uncharacterized LOC10834939213511542335132088Rat
1310128Med10mediator complex subunit 1013529849435310163Rat
402177885LOC134484984uncharacterized LOC13448498413530418135310382Rat
402379681LOC134484985uncharacterized LOC13448498513534204835343097Rat
11455515LOC108348755uncharacterized LOC10834875513534334735351506Rat
1598121Ube2ql1ubiquitin conjugating enzyme E2 QL113537726435417624Rat
11464132LOC10834944240S ribosomal protein S15a pseudogene13547031435470802Rat
1311954Nsun2NOP2/Sun RNA methyltransferase 213549058335514839Rat
3757Srd5a1steroid 5 alpha-reductase 113551491435548898Rat
41120638LOC120100362small nucleolar RNA SNORA2413554514635545275Rat
41090434Rabggtb-ps2Rab geranylgeranyltransferase subunit beta, pseudogene 213557646235579806Rat
1307356Tent4aterminal nucleotidyltransferase 4A13559438035627836Rat
1590840Hnrnpa1-ps18heterogeneous nuclear ribonucleoprotein A1, pseudogene 1813583367535834973Rat
41187490Mycbp-ps1Myc binding protein, pseudogene 113586105335861478Rat
6495554Ppid-ps12peptidylprolyl isomerase D, pseudogene 1213588858335900144Rat
402109659LOC134482588uncharacterized LOC13448258813609106236103014Rat
1595515Ap2b1-ps1adaptor related protein complex 2 subunit beta 1, pseudogene 113612132136124265Rat
1595500Psma7-ps1proteasome 20S subunit alpha 7, pseudogene 113615253536153262Rat
619965Adcy2adenylate cyclase 213620405436650645Rat
41342237Trnap-agg24transfer RNA proline (anticodon AGG) 2413638212336382204Rat
2324149LOC100362709proteasome activator complex subunit 2-like13655011336551458Rat
40962765Rnu6-783RNA, U6 small nuclear 78313663265136632757Rat
1308544Cfap90cilia and flagella associated protein 9013665428736678303Rat
1309729Fastkd3FAST kinase domains 313668672736695376Rat
1308671Mtrr5-methyltetrahydrofolate-homocysteine methyltransferase reductase13669537636727341Rat
402167367LOC134482589uncharacterized LOC13448258913672957436747857Rat
1594231Zfp455l1zinc finger protein 455 like 113675519736773283Rat
7704848Znf726l-ps1zinc finger protein 726 like, pseudogene 113677402536782368Rat
40985057LOC120100215U7 small nuclear RNA13677654336776607Rat
11429793LOC108349511uncharacterized LOC10834951113678829536796355Rat
41064447LOC120099099uncharacterized LOC12009909913681784236842777Rat
1566325Zfp874bzinc finger protein 874b13683070236842705Rat
9344246LOC10369095160S ribosomal protein L34 pseudogene13683390036836523Rat
1593979Zfp58zinc finger protein 5813684885836861605Rat
7718701LOC102547287zinc finger protein 728-like13688091436892421Rat
7600894Zfp748zinc finger protein 74813690378936919795Rat
1594173Zfp729bzinc finger protein 729b13693111136965484Rat
1564382Spry3-ps1sprouty RTK signaling antagonist 3, pseudogene 113698674036987342Rat
7697243Zfp729zinc finger protein 72913699410737007812Rat
41087395LOC120099100uncharacterized LOC12009910013700781437015854Rat
1587241Zfp273l-ps1zinc finger protein 273 like, pseudogene 113705005137066909Rat
41179892LOC120093155uncharacterized LOC12009315513710073337203441Rat
402209094LOC134484859ras-related protein Rab-1A-like13736998837370709Rat
1583514LOC681177similar to GTPase activating protein testicular GAP113750313937609185Rat
41270053LOC120099102rho GTPase-activating protein 20-like13767215837988216Rat
6493251Nid2-ps2nidogen 2, pseudogene 213775922637786508Rat
41063986LOC120099104uncharacterized LOC12009910413785917537867242Rat
41192130Nid2-ps5nidogen 2, pseudogene 513795477937971210Rat
402002128LOC134482590uncharacterized LOC13448259013812477338131912Rat
1597161LOC301792clone rb2 rab1a related protein pseudogene13821995538221046Rat
402203083LOC134482591uncharacterized LOC13448259113822086938229301Rat
41053334Rab1a-ps1RAB1A, member RAS oncogene family, pseudogene 113846461538466320Rat
402055410LOC134484986nidogen-2-like13871748138735835Rat
1587272LOC367572clone rb9 rab1a related protein pseudogene13890876738909632Rat
402195749LOC134484860ras-related protein Rab-1A-like13891289538914596Rat
402216828LOC134484861ras-related protein Rab-1A-like13902831939028986Rat
11394768LOC108349732uncharacterized LOC10834973213937508239380255Rat
41109328Rab1a-ps2RAB1A, member RAS oncogene family, pseudogene 213950501239505828Rat
402231757LOC134484987uncharacterized LOC13448498713982104939825586Rat
40996352Rab1a-ps3RAB1A, member RAS oncogene family, pseudogene 313997696539977617Rat
41356485Rab1a-ps4RAB1A, member RAS oncogene family, pseudogene 414052949040530103Rat
402291513LOC134484988uncharacterized LOC13448498814067174240677946Rat
40948223Nid2-ps13nidogen 2, pseudogene 1314081701940841135Rat
41102376LOC120100090uncharacterized LOC12010009014090078640929375Rat
41037329LOC120099103uncharacterized LOC12009910314099010241039487Rat
7734973Nid2l2nidogen 2 like 214103947641092171Rat
1586100Rab1-ps1RAB1, member RAS oncogene family, pseudogene 114120148941202992Rat
41258807LOC120100091uncharacterized LOC12010009114143369741440310Rat
402066718LOC134482592uncharacterized LOC13448259214144227641445438Rat
402316189LOC134478896nidogen-2-like14172064641728910Rat
7514941Cd99l3CD99 molecule like 314172198342009280Rat
41182833Nid2-ps6nidogen 2, pseudogene 614195493141969081Rat
1566284Hnrnpa1-ps47heterogeneous nuclear ribonucleoprotein A1, pseudogene 4714200768442009238Rat
402193606LOC134482598uncharacterized LOC13448259814202012942028447Rat
41123377LOC120100087uncharacterized LOC12010008714202119442045570Rat
40978443LOC120100095uncharacterized LOC12010009514206415342076792Rat
7544841LOC102555832uncharacterized LOC10255583214208622242091472Rat
620538Ppp1r14cprotein phosphatase 1, regulatory (inhibitor) subunit 14c14217797742358654Rat
1309288Iydiodotyrosine deiodinase14241009942425414Rat
1583676Plekhg1pleckstrin homology and RhoGEF domain containing G114261202342841727Rat
11520738LOC10834951760S ribosomal protein L7a pseudogene14270211742702946Rat
1584748Cycsl1cytochrome c, somatic like 114279800842798466Rat
1584766Brms1-ps1BRMS1, transcriptional repressor and anoikis regulator, pseudogene 114280286242806789Rat
1307311Mthfd1lmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like14284942443038313Rat
7630011Mapre1-ps1microtubule-associated protein, RP/EB family, member 1, pseudogene 114295136942957621Rat
41376744LOC120100178U1 spliceosomal RNA14299205042992211Rat
402175523LOC134484989uncharacterized LOC13448498914307011843079877Rat
402298885LOC134484125transcription factor BTF3-like14309205643093623Rat
402303780LOC134484990uncharacterized LOC13448499014310731143114723Rat
70988Akap12A-kinase anchoring protein 1214313551543225245Rat
1306621Zbtb2zinc finger and BTB domain containing 214323283943252115Rat
9270734Zbtb2lzinc finger and BTB domain containing 2 like14326057443265252Rat
1309546Rmnd1required for meiotic nuclear division 1 homolog14326520743299748Rat
1305235Armt1acidic residue methyltransferase 114329991643323675Rat
1310945Ccdc170coiled-coil domain containing 17014335101043458192Rat
402396341LOC134482620uncharacterized LOC13448262014337862343388234Rat
2581Esr1estrogen receptor 114351168543904454Rat
402332780LOC134482628uncharacterized LOC13448262814364673743665778Rat
40967854LOC120100474small nucleolar RNA SNORD8814370222143702314Rat
620546Syne1spectrin repeat containing nuclear envelope protein 114391764044388802Rat
402226664LOC134482627uncharacterized LOC13448262714396348143990239Rat
402284498LOC134482626uncharacterized LOC13448262614403451244035139Rat
41206076Rnu6-959RNA, U6 small nuclear 95914422777644227879Rat
1311467Myct1myc target 114442347844434751Rat
621647Vipvasoactive intestinal peptide14447023244478561Rat
41016349LOC120097707uncharacterized LOC12009770714456267244564137Rat
1309405Fbxo5F-box protein 514460141244607781Rat
1598312Mtrf1lmitochondrial translation release factor 1 like14461416244626367Rat
41176576LOC120100395small nucleolar RNA U2-1914461731244617391Rat
41307068LOC120100394small nucleolar RNA U2-3014461753444617603Rat
1305515Rgs17regulator of G-protein signaling 1714462758344729957Rat
402397869LOC134484991uncharacterized LOC13448499114473000244743820Rat
9220759Rpl30-ps2ribosomal protein L30, pseudogene 214489247644892951Rat
1562524Rpl27l6ribosomal protein L27 like 614494648944946797Rat
1586097Nt5c2-ps25'-nucleotidase, cytosolic II, pseudogene 214510507145106832Rat
7511239LOC102546606uncharacterized LOC10254660614512699145130714Rat
9225009Ube2n-ps4ubiquitin-conjugating enzyme E2N, pseudogene 414514894945153898Rat
1593145Rpl13a-ps12ribosomal protein L13A, pseudogene 1214529042845291086Rat
7551033LOC102546790uncharacterized LOC10254679014540133145424039Rat
41343633LOC120100475U2 spliceosomal RNA14551530545515369Rat
41352398LOC120097708uncharacterized LOC12009770814551710545545001Rat
3234Oprm1opioid receptor, mu 114556537145818722Rat
735159Ipcef1interaction protein for cytohesin exchange factors 114565425245857045Rat
402357975LOC134484992uncharacterized LOC13448499214572575145730004Rat
7723368Yes1-ps1YES proto-oncogene 1, Src family tyrosine kinase14577234245777660Rat
1595505Lims1-ps1LIM zinc finger domain containing 1, pseudogene 114584041345841394Rat
1307544Cnksr3Cnksr family member 314590458145996921Rat
41130940LOC120099109uncharacterized LOC12009910914593087045935311Rat
1560234Rsrc1-ps3arginine and serine rich coiled-coil 1, pseudogene 314604612146047237Rat
41247671Rnu6-859RNA, U6 small nuclear 85914609686946096966Rat
41127918LOC120097709uncharacterized LOC12009770914611284946117353Rat
708362Scaf8SR-related CTD-associated factor 814613297246321162Rat
2324148Tiam2TIAM Rac1 associated GEF 214632345046524769Rat
727795Tfb1mtranscription factor B1, mitochondrial14652051046567004Rat
1595446Cldn20claudin 2014653903946539698Rat
7558063Tmem127-ps1transmembrane protein 127, pseudogene 114653972246544998Rat
1303190Nox3NADPH oxidase 314664327746708109Rat
41393107LOC120099111uncharacterized LOC12009911114668327246763010Rat
11423353LOC108349518uncharacterized LOC10834951814687964146927989Rat
40952154LOC120097710uncharacterized LOC12009771014700170047012304Rat
402206747LOC134484993uncharacterized LOC13448499314720198847202988Rat
2324102Mrpl46-ps1mitochondrial ribosomal protein L46, pseudogene 114725209447261917Rat
41152311LOC120099112uncharacterized LOC12009911214742144047438721Rat
7570512LOC102548198uncharacterized LOC10254819814748336547505471Rat
41299842LOC120099113uncharacterized LOC12009911314771756847725289Rat
40997215Srsf3-ps8serine and arginine rich splicing factor 3, pseudogene 814779639147796846Rat
7747355LOC102548409uncharacterized LOC10254840914789655347909035Rat
7571387LOC102548472uncharacterized LOC10254847214791335747921367Rat
402118584LOC134484862uncharacterized LOC13448486214793528647940933Rat
708504Arid1bAT-rich interaction domain 1B14797319948328793Rat
1307262Tmem242transmembrane protein 24214839786548424639Rat
727955Ldhal6blactate dehydrogenase A-like 6B14840299748404420Rat
41010327LOC120099115uncharacterized LOC12009911514846240148466376Rat
1565877Zdhhc14zinc finger DHHC-type palmitoyltransferase 1414847386048746201Rat
1584466Snx9sorting nexin 914882706148915215Rat
402448438LOC134484994uncharacterized LOC13448499414883167448835064Rat
41219482Mrto4-ps2mRNA turnover 4, ribosome maturation factor, pseudogene 214891535148923231Rat
69436Synj2synaptojanin 214892374249027153Rat
402304365LOC134482645uncharacterized LOC13448264514895642348959322Rat
402441310LOC134482650uncharacterized LOC13448265014898464048988280Rat
1565064Serac1serine active site containing 114902584549061853Rat
40933306LOC120099116uncharacterized LOC12009911614903208749039487Rat
1560991Gtf2h5general transcription factor IIH subunit 514906190449068612Rat
7712286LOC102551377uncharacterized LOC10255137714907149649087617Rat
1564487Tulp4TUB like protein 414908249249218262Rat
40955462Trnap-agg33transfer RNA proline (anticodon AGG) 3314913392149134002Rat
1566403Tmem181transmembrane protein 18114923592349290244Rat
402030126LOC134482652uncharacterized LOC13448265214924068449247543Rat
620261Dynlt1dynein light chain Tctex-type 114929209349299051Rat
1561992Sytl3synaptotagmin-like 314930093549372533Rat
41158252LOC120099117uncharacterized LOC12009911714934045549348212Rat
621161Ezrezrin14937303349416573Rat
41191607Rnu6-546RNA, U6 small nuclear 54614945095549451060Rat
1311306Rsph3radial spoke head 314950698849565740Rat
1308618TagapT-cell activation RhoGTPase activating protein14957575049584747Rat
41042460LOC120099118uncharacterized LOC12009911814958864549601410Rat
7620815LOC102551987uncharacterized LOC10255198714963968349650255Rat
1560015Tecrl2trans-2,3-enoyl-CoA reductase like 214966866249669780Rat
1310640Fndc1fibronectin type III domain containing 114968685649769263Rat
402262139LOC134484863uncharacterized LOC13448486314977701549777685Rat
9168471LOC103690969uncharacterized LOC10369096914978641449834225Rat
1589454Atp5f1c-ps1ATP synthase F1 subunit gamma, pseudogene 114981229949813543Rat
3732Sod2superoxide dismutase 215004332350050168Rat
1563824WtapWT1 associated protein15007097350096074Rat
7683242LOC102553528uncharacterized LOC10255352815009553950100950Rat
1359366Acat2acetyl-CoA acetyltransferase 215010084050118886Rat
40996607LOC120099120acetyl-CoA acetyltransferase, cytosolic-like15012218450129439Rat
41270287LOC120099122uncharacterized LOC12009912215013247450135875Rat
402153106LOC134482681uncharacterized LOC13448268115015233450153803Rat
401988958LOC134482682uncharacterized LOC13448268215028414750288324Rat
402223070LOC134482687uncharacterized LOC13448268715029181750298661Rat
402140487LOC134482686uncharacterized LOC13448268615030017150307027Rat
402326624LOC134482690uncharacterized LOC13448269015030853650313399Rat
1562948Acat2l1acetyl-CoA acetyltransferase 2-like 115034159650376961Rat
3832Tcp1t-complex 115037684850384527Rat
402450600LOC134478795small nucleolar RNA SNORA2015037832650378455Rat
402113541LOC134478797small nucleolar RNA SNORA2915038161850381754Rat
1306387Mrpl18mitochondrial ribosomal protein L1815038495150389769Rat
1308678Pnldc1PARN like ribonuclease domain containing exonuclease 115039088450409457Rat
738049Mas1lMAS1 proto-oncogene like, G protein-coupled receptor15041617850427730Rat
3049Mas1MAS1 proto-oncogene, G protein-coupled receptor15042806450459537Rat
41355712LOC120099123uncharacterized LOC12009912315046243750470956Rat
402278817LOC134482693uncharacterized LOC13448269315047149550556879Rat
402252705LOC134482699uncharacterized LOC13448269915048377850511222Rat
2871Igf2rinsulin-like growth factor 2 receptor15052687850615265Rat
41336906LOC120100462small nucleolar RNA SNORA4015055097450551105Rat
3224Slc22a1solute carrier family 22 member 115062433950651437Rat
402216805LOC134484995uncharacterized LOC13448499515065117850655753Rat
61936Slc22a2solute carrier family 22 member 215066881750711019Rat
9166062LOC103690972protein LSM12 homolog pseudogene15070173550702280Rat
1593144Hnrnpa1-ps10heterogeneous nuclear ribonucleoprotein A1, pseudogene 1015073721250738482Rat
7563457LOC102553224uncharacterized LOC10255322415076257650769448Rat
3701Slc22a3solute carrier family 22 member 315078321850872358Rat
619893Plgplasminogen15087292750915406Rat
1587036Dut-psdeoxyuridine triphosphatase pseudogene15091651150917371Rat
40928345LOC120099124uncharacterized LOC12009912415094250950977858Rat
1311192Map3k4mitogen activated protein kinase kinase kinase 415097787051067117Rat
41307516LOC120100432small nucleolar RNA SNORA1715099739850997532Rat
619916Agpat41-acylglycerol-3-phosphate O-acyltransferase 415107508151181548Rat
11368566LOC108349099uncharacterized LOC10834909915112852351139582Rat
402342249LOC134482716uncharacterized LOC13448271615120645351230668Rat
61797Prknparkin RBR E3 ubiquitin protein ligase15123641052430242Rat
402439667LOC134482715uncharacterized LOC13448271515126202951265632Rat
41292788LOC120100099uncharacterized LOC12010009915149464051502045Rat
402261219LOC134482719uncharacterized LOC13448271915172280951727802Rat
11477525LOC108349802glyceraldehyde-3-phosphate dehydrogenase pseudogene15232124152322241Rat
402139065LOC134482720uncharacterized LOC13448272015237571152408688Rat
1561027Pacrgparkin coregulated15243039052853272Rat
41202383LOC120100098uncharacterized LOC12010009815283328952909023Rat
10059728Cahmcolon adenocarcinoma hypermethylated15293351252934668Rat
1584886QkiQKI, KH domain containing RNA binding15293535753047338Rat
1584885Krt18-ps4keratin 18, pseudogene 415316873253170272Rat
7526176LOC102549462uncharacterized LOC10254946215325140653270904Rat
7542654LOC102549608uncharacterized LOC10254960815348855153501414Rat
1311201Pabpc6poly(A) binding protein, cytoplasmic 615359290253595978Rat
41246986LOC120097713uncharacterized LOC12009771315365726953690348Rat
11400668Actb-ps4actin, beta, pseudogene 415380682353810981Rat
41334313LOC120100334U2 spliceosomal RNA15385011253850236Rat
41182998H3f3a-ps4H3.3 histone A, pseudogene 415406033154080316Rat
11433159LOC108349524uncharacterized LOC10834952415411924354131621Rat
1598061MGC94891hypothetical protein LOC68121015428793454311640Rat
68434Pde10aphosphodiesterase 10A15431334354765668Rat
402110773LOC134484996uncharacterized LOC13448499615473608154742879Rat
41247706Rpl23a-ps4ribosomal protein L23a, pseudogene 415474868754770129Rat
1310141TbxtT-box transcription factor T15484567454859340Rat
1597985T2brachyury 215486602354932332Rat
41066016LOC120100103uncharacterized LOC12010010315490094354913811Rat
1592663Paics-ps5phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 515493471854938532Rat
1564079Prr18proline rich 1815494777554951558Rat
1359119Sft2d1SFT2 domain containing 115495724754973143Rat
620902Mpc1mitochondrial pyruvate carrier 115498530554996979Rat
1308562Ccr6C-C motif chemokine receptor 615502203755055857Rat
402190272LOC134482722uncharacterized LOC13448272215502738055033235Rat
1583370Cep43centrosomal protein 4315508098355111509Rat
402032034LOC134484997uncharacterized LOC13448499715511014855118092Rat
402193627LOC134484998uncharacterized LOC13448499815512389655133563Rat
1309918Rnaset2ribonuclease T215513353255150701Rat
620676Rps6ka2ribosomal protein S6 kinase A215517898855454271Rat
41199722LOC120093055small Cajal body-specific RNA 315519582455195938Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34449D1Mgh1713611042662310426759Ratregion
34465D1Mgh421315151134451511557Ratregion
33660D1Mit914715190920651909353Ratregion
36253D1Rat1713615219596252196098Ratregion
37364D1Rat15024311706518317065426Ratregion
37598D1Rat17618513456572634565911Ratregion
35242D1Rat1117514266649742666672Ratregion
35517D1Rat1815815181610051816258Ratregion
37974D1Rat21124113287937232879613Ratregion
36550D1Rat1215413532041735320571Ratregion
36590D1Rat16015313028848330288636Ratregion
36640D1Rat1418313418437334184556Ratregion
36651D1Rat1614814464216544642313Ratregion
35853D1Rat912513135004331350168Ratregion
35885D1Rat810013070837530708475Ratregion
35891D1Rat1911815194090451941022Ratregion
39676D1Rat31423215479103254791264Ratregion
38082D1Rat14324615172443051724676Ratregion
38354D1Rat16224112490948924909730Ratregion
40368D1Rat25315314589172745891880Ratregion
40704D1Rat25221112521913025219341Ratregion
38424D1Rat19023314443306444433297Ratregion
38426D1Rat19122515151134451511569Ratregion
38642D1Rat15424215372023253720474Ratregion
38722D1Rat22823215188976951890001Ratregion
40086D1Rat25115112925731729257468Ratregion
40236D1Rat31517415501205855012232Ratregion
39376D1Rat31320714805150648051713Ratregion
42086D1Arb4413111096172110961852Ratregion
42264D1Rat46310512402132124021426Ratregion
42266D1Rat48925915526031255260571Ratregion
42267D1Rat49212315377052753770650Ratregion
42444D1Rat32921511388932413889539Ratregion
42446D1Rat38921311665153516651748Ratregion
42447D1Rat39020411766643417666638Ratregion
42449D1Rat39123712146551621465753Ratregion
42450D1Rat39543913101939331019832Ratregion
42452D1Rat39419212995397629954168Ratregion
42453D1Rat47821812673094426731162Ratregion
42454D1Rat39320213000740130007603Ratregion
42460D1Rat40222614456284844563074Ratregion
40826D1Rat25421014515036445150574Ratregion
41818D1Rat39820714320055243200759Ratregion
43181D1Got1318011511993815120118Ratregion
43182D1Got1424211527032015270562Ratregion
43185D1Got925811514345815143716Ratregion
43188D1Got1219111597453315974724Ratregion
43194D1Got2517112060173320601904Ratregion
43200D1Got2714612480157424801720Ratregion
43211D1Got4719214855439348554585Ratregion
43219D1Got6017915087428350874462Ratregion
43222D1Got5523915091042250910661Ratregion
43225D1Wox114315287036452870507Ratregion
43661D1Got28325113383210733832358Ratregion
60747D1Rat33117414857299748573171Ratregion
66403D1Mco421413086662230866836Ratregion
66414D1Mco815514157098341571138Ratregion
1628396D17Got22215213293784232937994Ratregion
1635008D1Got37227811443559314435871Ratregion
1636332D1Got36710714155678441556891Ratregion
1637068D17Got2219613258750432587600Ratregion
2292731D1Mco7815413392641733926571Ratregion
2292743D1Mco7623911980260819802847Ratregion
2315164D1Mco11417513450034034500515Ratregion
2315178D1Mco12519313482152234821715Ratregion
2315184D1Mco10614813425760334257751Ratregion
2315190D1Mco11719213461257734612769Ratregion
2315194D1Mco10715013426168834261838Ratregion
5036181D13Jpk210913293782932937938Ratregion
5036193D17Wtc114715264379752643944Ratregion
5037041AU05002218015046959150469771Ratregion
5026424RH13215971414791825447918968Ratregion
5034486BF40915621514839158348391798Ratregion
5029329RH14438322011477533914775559Ratregion
5035244BM38438216013018913530189295Ratregion
5035280BM38606120111672362716723828Ratregion
5027793RH9476117911096537210965551Ratregion
5054961RH14352531011391415013914460Ratregion
5058484BI29043721112264191622642127Ratregion
5045004RH13092821715502384755024064Ratregion
5049510RH13352219713075413030754327Ratregion
5078104RH14014619315004318750043380Ratregion
5078778RH14054657415349966953500243Ratregion
5071292RH13499819714626081046261007Ratregion
5068386AU04717815012167688721677037Ratregion
5069606AU04638618412299430622994490Ratregion
5069062AU0467489913275627332756372Ratregion
5069776AU0288129911898611318986212Ratregion
5069264AU04661222213244502032445242Ratregion
5063826AW53554316811042113710421305Ratregion
5063100BF39838021612121776921217985Ratregion
5089105AU04895715212258038822580540Ratregion
5090845AU04999818114855442448554605Ratregion
5088241AU04845117615046959050469766Ratregion
5088289AU0484819712882898028829077Ratregion
5088383AU04853621515530739855307613Ratregion
5090033AU04951028711969044419690731Ratregion
5090051AU04952116215085148650851648Ratregion
5503762UniSTS:47054048814584075145841239Ratregion
5505220D10Csu359311692087516921468Ratregion
Position Markers

Flank 1: (D1Rat121)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2120,763,158 - 20,763,261 (+)MAPPER
Rnor_6.0121,812,623 - 21,812,725NCBI
Rnor_5.0123,292,314 - 23,292,416UniSTS
RGSC_v3.4121,288,065 - 21,288,167UniSTS
RGSC_v3.4121,288,064 - 21,288,167RGD
RGSC_v3.1121,289,420 - 21,289,522RGD
Celera119,515,170 - 19,515,272UniSTS
RH 3.4 Map1199.7RGD
RH 3.4 Map1199.7UniSTS
RH 2.0 Map1126.8RGD
FHH x ACI Map118.0099RGD
Peak: (D1Rat211)
Rat AssemblyChrPosition (strand)Source
GRCr8132,879,372 - 32,879,613 (+)Marker Load Pipeline
mRatBN7.2131,050,840 - 31,051,081 (+)MAPPER
Rnor_6.0133,667,777 - 33,668,017NCBI
Rnor_5.0135,077,728 - 35,077,968UniSTS
RGSC_v3.4171,147,796 - 1,148,037RGD
RGSC_v3.4171,147,797 - 1,148,037UniSTS
RGSC_v3.1171,147,796 - 1,148,037RGD
Celera129,685,067 - 29,685,307UniSTS
FHH x ACI Map125.71RGD
FHH x ACI Map125.71UniSTS
Flank 2: (D15Rat45)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2144,095,638 - 44,095,856 (+)MAPPER
Rnor_6.0144,409,585 - 44,409,802NCBI
Rnor_5.0145,739,429 - 45,739,646UniSTS
RGSC_v3.4138,490,284 - 38,490,502RGD
RGSC_v3.4138,490,285 - 38,490,502UniSTS
RGSC_v3.1138,493,229 - 38,493,447RGD
Celera139,730,228 - 39,730,445UniSTS
FHH x ACI Map1519.6699UniSTS
FHH x ACI Map1519.6699RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)14345783787558729Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1774611852746118Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)151940904101229020Rat
1354647Despr8Despair related QTL 80.0000341locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1126564886Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)14630261591302615Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)14212296887122968Rat
2317755Glom22Glomerulus QTL 223.8urine protein amount (VT:0005160)urine protein level (CMO:0000591)1134184556Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
1578756Iddm22Insulin dependent diabetes mellitus QTL 222.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12050832665508326Rat
4889962Bss94Bone structure and strength QTL 943.8tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15190920691302615Rat
2313090Bmd69Bone mineral density QTL 694.40.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)1529322934184556Rat
4889451Eae29Experimental allergic encephalomyelitis QTL 295.51nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1774612152746121Rat
70179Xhs2X-ray hypersensitivity QTL 23.2intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)1143965634Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)14630261591302615Rat
731169Bp153Blood pressure QTL 1530.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13287937235320571Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)14350995288509952Rat
1357397Bw41Body weight QTL 414.190.0001body mass (VT:0001259)body weight (CMO:0000012)12940927974409279Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)14345783787558729Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)14630261591302615Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)14350995288509952Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
7421626Bp360Blood pressure QTL 3600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1694102251941022Rat
2313070Bss52Bone structure and strength QTL 524.40.0001body length (VT:0001256)body length (CMO:0000013)1529322934184556Rat
1357401Bw43Body weight QTL 433.75body mass (VT:0001259)body weight (CMO:0000012)1690935351909353Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)14630261591302615Rat
631494Bp95Blood pressure QTL 95400.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)11731537851816258Rat
5684998Bss101Bone structure and strength QTL 1013.6tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)1690935351909353Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)14630261591302615Rat
5684999Bss102Bone structure and strength QTL 1025.57e-07tibia strength trait (VT:1000284)tibia stiffness (CMO:0001735)1690935351909353Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
1331778Rf28Renal function QTL 284.66urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)14345783787558729Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)14630261591302615Rat
1300170Rf6Renal function QTL 63.14renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)1128483164Rat
631508Sald1Serum aldosterone level QTL 13.7blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)11168446456684464Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)13070837587558729Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13456572679565726Rat
1558642Prcr2Prostate cancer resistance QTL 24.3prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)11037949255379492Rat
1600360Mcs16Mammary carcinoma susceptibility QTL 162.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1126564886Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)14212296887122968Rat
2302038Pia31Pristane induced arthritis QTL 315.50.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)11282049457820494Rat
4889919Bss86Bone structure and strength QTL 864.1tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)14630261591302615Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)14350995288509952Rat
634353Rends2Renal damage susceptibility QTL 20.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)12065642065656420Rat
2313053Bss51Bone structure and strength QTL 513.80.0001tibia length (VT:0004357)tibia length (CMO:0000450)1529322934184556Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_statistics_details linkage analysis used only rats without bilateral testicular tumors 1358944
qtl_statistics_details MAPMAKER/EXP(version 3.0b) and MAPMAKER/QTL (version 1.1b) were used for linkage analysis and maps 1358944