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Gene: Pdcd6 (programmed cell death 6) Rattus norvegicus
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Symbol: Pdcd6
Name: programmed cell death 6
Description: Predicted to have several functions, including calcium-dependent protein binding activity; metal ion binding activity; and protein homodimerization activity. Predicted to be involved in several processes, including mesenchymal cell differentiation; negative regulation of signal transduction; and positive regulation of cellular protein metabolic process. Predicted to colocalize with the Cul3-RING ubiquitin ligase complex. Orthologous to human PDCD6 (programmed cell death 6); INTERACTS WITH (+)-schisandrin B; (RS)-amphetamine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ALG-2; apoptosis-linked gene 2 protein homolog; LOC308061; programmed cell death protein 6
Orthologs:
Homo sapiens (human) : PDCD6 (programmed cell death 6)  HGNC  Alliance
Mus musculus (house mouse) : Pdcd6 (programmed cell death 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdcd6 (programmed cell death 6)
Pan paniscus (bonobo/pygmy chimpanzee) : PDCD6 (programmed cell death 6)
Canis lupus familiaris (dog) : PDCD6 (programmed cell death 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdcd6 (programmed cell death 6)
Sus scrofa (pig) : PDCD6 (programmed cell death 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0131,576,183 - 31,591,852 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl131,576,183 - 31,591,849 (+)Ensembl
Rnor_5.0133,002,331 - 33,017,997 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4129,769,911 - 29,785,577 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1129,772,917 - 29,788,523 (+)NCBI
Celera127,618,297 - 27,633,964 (+)NCBICelera
Cytogenetic Map1p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pdcd6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311239
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.