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Gene: Armt1 (acidic residue methyltransferase 1) Rattus norvegicus

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Symbol:

Armt1

Name:

acidic residue methyltransferase 1

RGD ID:

1305235

Description:

Predicted to enable enzyme binding activity; methyltransferase activity; and phosphatase activity. Predicted to be involved in DNA damage response. Orthologous to human ARMT1 (acidic residue methyltransferase 1); INTERACTS WITH 3,4-methylenedioxymethamphetamine; bisphenol A; buspirone.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

damage-control phosphatase ARMT1; hypothetical protein LOC292267; LOC292267; protein-glutamate O-methyltransferase; RGD1305235; similar to RIKEN cDNA 1700052N19; sugar phosphate phosphatase ARMT1; UPF0364 protein C6orf211 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ARMT1 (acidic residue methyltransferase 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Armt1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dcph1 (damage control phosphatase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DCPH1 (damage control phosphatase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ARMT1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dcph1 (damage control phosphatase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ARMT1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DCPH1 (damage control phosphatase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dcph1 (damage control phosphatase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ARMT1 (acidic residue methyltransferase 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Armt1 (acidic residue methyltransferase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	armt1 (acidic residue methyltransferase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG11474	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG11475	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG2921	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG4161	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F31D4.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YMR027W	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	armt1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	43,299,916 - 43,323,675 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	43,299,826 - 43,323,670 (+)	Ensembl				GRCr8
mRatBN7.2	1	40,894,558 - 40,918,302 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	40,894,550 - 40,918,302 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	41,421,844 - 41,445,577 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	47,409,040 - 47,432,775 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	41,497,330 - 41,521,058 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	40,982,761 - 41,006,371 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	40,982,862 - 41,006,371 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	42,325,061 - 42,348,570 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	35,143,718 - 35,169,030 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	36,585,729 - 36,608,806 (+)	NCBI		Celera
RGSC_v3.1	1	35,146,662 - 35,171,972 (+)	NCBI
Cytogenetic Map	1	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 6q24-q25 deletion syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

3,4-methylenedioxymethamphetamine (EXP)

4,4'-sulfonyldiphenol (ISO)

acrylamide (ISO)

aldehydo-D-glucose (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzatropine (ISO)

beta-lapachone (ISO)

bisphenol A (EXP)

bisphenol AF (ISO)

buspirone (EXP)

cisplatin (ISO)

clozapine (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

D-glucose (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

ethanol (ISO)

glucose (ISO)

hydrogen peroxide (ISO)

ivermectin (ISO)

nickel atom (ISO)

ozone (ISO)

perfluorooctane-1-sulfonic acid (ISO)

quercetin (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

titanium dioxide (ISO)

triptonide (ISO)

trovafloxacin (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA damage response (IBA,IEA,ISO,ISS)

methylation (IEA)

Molecular Function

enzyme binding (IEA,ISO)

fructose 6-phosphate aldolase activity (IEA)

fructose-1-phosphatase activity (IEA)

hydrolase activity (IEA)

metal ion binding (IEA)

methyltransferase activity (IEA)

phosphatase activity (IBA)

protein binding (ISO)

protein carboxyl O-methyltransferase activity (IEA,ISO,ISS)

protein-glutamate O-methyltransferase activity (IEA)

S-adenosylmethionine-dependent methyltransferase activity (IEA,ISO,ISS)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15489334	PMID:25732820

Genomics

Comparative Map Data

Armt1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	43,299,916 - 43,323,675 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	43,299,826 - 43,323,670 (+)	Ensembl				GRCr8
mRatBN7.2	1	40,894,558 - 40,918,302 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	40,894,550 - 40,918,302 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	41,421,844 - 41,445,577 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	47,409,040 - 47,432,775 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	41,497,330 - 41,521,058 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	40,982,761 - 41,006,371 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	40,982,862 - 41,006,371 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	42,325,061 - 42,348,570 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	35,143,718 - 35,169,030 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	36,585,729 - 36,608,806 (+)	NCBI		Celera
RGSC_v3.1	1	35,146,662 - 35,171,972 (+)	NCBI
Cytogenetic Map	1	q11	NCBI

ARMT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	151,452,466 - 151,470,101 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	151,452,258 - 151,470,101 (+)	Ensembl			hg38	GRCh38
GRCh37	6	151,773,601 - 151,791,236 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	151,815,115 - 151,832,925 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	151,865,535 - 151,883,346	NCBI
Celera	6	152,507,286 - 152,525,096 (+)	NCBI		Celera
Cytogenetic Map	6	q25.1	NCBI
HuRef	6	149,335,454 - 149,353,292 (+)	NCBI		HuRef
CHM1_1	6	152,037,567 - 152,055,377 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	152,653,108 - 152,670,749 (+)	NCBI		T2T-CHM13v2.0

Armt1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	4,382,572 - 4,405,140 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	4,382,467 - 4,405,141 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	4,429,275 - 4,455,140 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	4,432,467 - 4,455,141 (+)	Ensembl			mm10	GRCm38
MGSCv37	10	5,891,401 - 5,913,936 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	5,891,400 - 5,914,074 (-)	NCBI		MGSCv36	mm8
Celera	10	4,361,934 - 4,384,544 (+)	NCBI		Celera
Cytogenetic Map	10	A1	NCBI
cM Map	10	2.06	NCBI

Dcph1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955439	10,138,804 - 10,151,086 (-)	Ensembl
ChiLan1.0	NW_004955439	10,136,393 - 10,151,178 (-)	NCBI	ChiLan1.0	ChiLan1.0

DCPH1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	171,475,215 - 171,493,101 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	169,367,160 - 169,389,701 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	149,268,840 - 149,286,618 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	153,965,211 - 153,983,027 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	153,965,211 - 153,983,027 (+)	Ensembl			panPan2	panpan1.1

ARMT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	41,799,853 - 41,814,684 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	41,799,868 - 41,813,766 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	42,641,018 - 42,655,865 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	41,984,751 - 41,999,589 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	41,984,839 - 41,999,589 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	41,858,197 - 41,873,274 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	41,702,126 - 41,716,752 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	42,208,654 - 42,223,726 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dcph1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	137,092,082 - 137,103,421 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936489	4,344,365 - 4,355,484 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936489	4,344,074 - 4,355,405 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARMT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	14,772,610 - 14,795,318 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	14,777,131 - 14,795,323 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	17,190,304 - 17,206,671 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DCPH1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	78,912,208 - 78,929,746 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	78,911,651 - 78,929,897 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	51,243,196 - 51,260,722 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dcph1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624785	6,801,512 - 6,814,680 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Armt1
67 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	106
Count of miRNA genes:	76
Interacting mature miRNAs:	94
Transcripts:	ENSRNOT00000026367
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	7746118	52746118	Rat
4889451	Eae29	Experimental allergic encephalomyelitis QTL 29	5.51		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	1	7746121	52746121	Rat
1357397	Bw41	Body weight QTL 41	4.19	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	29409279	74409279	Rat
70179	Xhs2	X-ray hypersensitivity QTL 2	3.2		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	1	1	43965634	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
1558642	Prcr2	Prostate cancer resistance QTL 2	4.3		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	1	10379492	55379492	Rat
1354643	Foco2	Food consumption QTL 2	7.17	0.0001	eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	1	42122968	87122968	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	6941022	51941022	Rat
1357401	Bw43	Body weight QTL 43	3.75		body mass (VT:0001259)	body weight (CMO:0000012)	1	6909353	51909353	Rat
631494	Bp95	Blood pressure QTL 95	40	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	17315378	51816258	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	6909353	51909353	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	7e-07	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	6909353	51909353	Rat
1354599	Bw29	Body weight QTL 29	3.46	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	42122968	87122968	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
2302038	Pia31	Pristane induced arthritis QTL 31	5.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	1	12820494	57820494	Rat
634353	Rends2	Renal damage susceptibility QTL 2		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	1	20656420	65656420	Rat
1578756	Iddm22	Insulin dependent diabetes mellitus QTL 22	2.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	20508326	65508326	Rat
631508	Sald1	Serum aldosterone level QTL 1	3.7		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	1	11684464	56684464	Rat
1331785	Rf27	Renal function QTL 27	4.643		urine sodium amount (VT:0006274)	urine sodium level (CMO:0000129)	1	30708375	87558729	Rat
1300172	Bp172	Blood pressure QTL 172	3.56		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	34565726	79565726	Rat

Markers in Region

RH137544

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	40,901,646 - 40,901,786 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	40,989,931 - 40,990,070	NCBI	Rnor6.0
Rnor_5.0	1	42,332,130 - 42,332,269	UniSTS	Rnor5.0
Celera	1	36,592,799 - 36,592,938	UniSTS
Cytogenetic Map	1	p11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001017447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC078920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000026367 ⟹ ENSRNOP00000026367

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	43,299,826 - 43,323,668 (+)	Ensembl
mRatBN7.2 Ensembl	1	40,894,550 - 40,918,302 (+)	Ensembl
Rnor_6.0 Ensembl	1	40,982,862 - 41,006,371 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092809 ⟹ ENSRNOP00000075976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	40,894,616 - 40,913,637 (+)	Ensembl
Rnor_6.0 Ensembl	1	40,982,900 - 41,001,511 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092953 ⟹ ENSRNOP00000076009

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	1	40,982,906 - 40,990,149 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093126

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	40,910,788 - 40,916,725 (+)	Ensembl
Rnor_6.0 Ensembl	1	40,998,636 - 41,004,790 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093943 ⟹ ENSRNOP00000086037

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	43,302,331 - 43,323,670 (+)	Ensembl
mRatBN7.2 Ensembl	1	40,896,960 - 40,918,302 (+)	Ensembl

RefSeq Acc Id:

NM_001017447 ⟹ NP_001017447

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	43,299,949 - 43,323,675 (+)	NCBI
mRatBN7.2	1	40,894,578 - 40,918,302 (+)	NCBI
Rnor_6.0	1	40,982,862 - 41,006,371 (+)	NCBI
Rnor_5.0	1	42,325,061 - 42,348,570 (+)	NCBI
RGSC_v3.4	1	35,143,718 - 35,169,030 (+)	RGD
Celera	1	36,585,729 - 36,608,806 (+)	RGD

Sequence:

show sequence

GGGCTCCGTAGCCGTTACCGTTGAACCCCGAGCAACGCCAGTGAGTGGCGTGTGGCGCCGGCGC
GATGGCCGAGTCCCCGGCGTTTCTCTCCGCTCAGGACGTGGGGTCCTTCGCATATCTTACAATT
AAGGACAGAACACCGCAGATCTTAACCAAGGTTATTGATACATTGCATCGACATAAAAGTGAAT
TTTTTGAAAAACATGGAGAGGAAGGCGTTGAAGCTGAGAAGAAAGCCATCTCTCTTCTTTCTAA
ATTACGGAATGAACTGCAGACAGATAAACCAATTATCCCTTTGGTGGACAAGTGTGTTGACACG
GACATATGGAATCAATACCTGGAATATCAGCGGAGCCTTTTAAATGAAGGAGACGGGGAGCCAC
GTTGGTTCTTCTCGCCCTGGTTGTTCGTAGAATGCTACATGTATCGGAGAATTCATGAAGCCAT
CATGCAGAGTCCACCAATCCATGACTTTGATGTGTTTAAGGAAAGTAAAGACGAGAACTTCTTT
GAGTCGCAGGACTCCATCAATGCTCTGTGTACACACTTGCTGCAGCTGAAACCCATCACAGACC
TTGGGGAAAAACAGATCCAGGACGAGTTCTTCAAACTCCTGCAGATTTCTCTCTGGGGGAATAA
GTGCGACCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAAGGCCGATATAATAAATTCTTTG
AAAGACCTAAAACCATTCATTTTAGTAAATGAGACAGAATCTCTCTGGGCATTGCTTAGTAAGT
TAAAGAAAACAGCAGAGCCCCCCGCAGTTAGAGTAGACATCGTTCTGGATAATTCTGGGTTTGA
ACTGGTTACAGATTTAGTATTTGCAGACTTCTTGTTATCCTCTGAATTAGCTACTGAGATTCAT
TTTCATGGGAAAATCATCCCATGGTTTGTGTCTGACGTTACTGTGCGGGACTTTGAGTGGATAG
TTGAGCATATGAAGGGTAGTCATCTGGAGTCCATGTCTGCCTGTGGGGCTGCCTGGGAGGCCTA
TGTTGGGATGAAGAAGTGGGTTTACCACGACCATGCCTTTTGGACTCTGCCTCATCCATTCTGT
GCAATGCCCCAGGTCGCCCCTGACTTATATGCTGAACTGCAAAAGGCAGGTGTTGTTTTATTTA
AGGGAGATTTGAATTATAGGAAGCTGATGGGTGACAGAAAATGGAAGTTCACCGTTCCATTCCA
TCAGGCTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATTAGAACATTGAAGTGTGAGCTT
CAGGTTGGGCTGCAGCCTGGGCAGGCCGAGCACCTCACAGCCTCTGACCCCCACTGGCTGACCA
CAGGCAAGTATGGAATATTTCAGTTTGATGGGCCACTTTGACTCTACTCAGGAATTCCTGGTGG
CAGAGAATGTTCTGTGAATCTCCCTTCAGCCTCAGAAAAACAGAGCATGGATTCAGGCCTGGCT
TCTCCTCAGCATGGGCAGCCCCATGTCTCAGCTCCTGTGCTACCTTACAGACTGTAGATGAGGC
TCCTTGGAATGCTTCCCTCCTGCGTTGTTTTGGGTTTTAAGCCAGTTACACTTCTATTGGAATT
TTAGTCACTATTCCAAGTAAATGCAAACTTTCAAGTGGTTTTAATGAACTCATCTTTGACTTCA
AAGAATGCAAAAATGTGGGTGACTTTGCTTTAAAAACTAATTTAAATGTTAGCAAATCTTGTTT
TCTTAAACTGGTTGTTTAATACGAGGAAGCTTATTGTTACTTAACTTAAGTTTTGGCTCTTGAG
TTAGTGGCCCAGTGAACACATGCCTTGTAAGAGCTCTCCCAGGAGGCGTGTGCATGATGCTTGA
ACACAATTACCTCAGACCTGAACCACAGCCTGCTCTCTCGCATGCATTAAGTTTTTAAAGCCCA
TTTTCTTACATAGATTTGTATTTTGATTGATCTATGGAAAGGGTCAAAGCACAAACTGAACATC
TAAACAGTGACTGACAAAGTATGAGTACAGTTGTGTCCCCATTGTCCTTCCGATTGCCATGGTG
ACCTCACCACCACAGTGGTGTCCAGATGAAGACAGCTTCAGTTTGCAGTAGCAGACTTAGATGG
AAATGACTGTTGGGCATTGTTTTAGTTACTGCCAAGCTGAGTTCAATCTTCATATCACACGTTG
TATAGTTCCTCACCTCAGATATAGAGTCTATAAATTCTTGTTACTTTGTTTCAAAACAAATTGG
AAATAAAGTTGAAATGCTTTCTGTACTGGAATAATAAAATGAATTTTACAGAGAAAAAAAAAAA
AAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006227833 ⟹ XP_006227895

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	43,315,399 - 43,323,675 (+)	NCBI
mRatBN7.2	1	40,909,989 - 40,918,302 (+)	NCBI
Rnor_6.0	1	40,997,528 - 41,006,371 (+)	NCBI
Rnor_5.0	1	42,325,061 - 42,348,570 (+)	NCBI

Sequence:

show sequence

AGCTAAATCCCCAACCCAATCTCTTAAGAAATTCTTATGTGCATCTGGTTTATAGTACAGAAGA
GGTGATATGAATTGATCTTTTAGTTTATAAGTTCCAAAAATACAAGTTTGCTGTAGAAGAAATC
CTTTAGTACCTGTTTCTAAACACGGTAGTGTAGCTCAGGCTCCAGGACGAGCCTGCAACACTGT
GGCTGCTATCACAACTGGGGAAGCAAGACAGAAATGGCCGCGCATAGAGACTGCGGCTAGTGAG
CACAGTTGAGAAGACCCTCCCAAGACTGGCTTCAGTGAGACAGCACATTTAATTGGGAGAACAA
AGGACGTGGGTAAGGTCTTCAGGAGAGTGTACATCGTTGGTGGGGGTCAGAGCAATGAGGGTGC
CTCAAGCAGAGAGAGGAGTTTCAGATATTGCTGGACATGACCTCACAATGAGAGGAGGCTCACC
CTGGCTACTAGGCTATGTGACCTCCTCTGAGGAGCAAGGGCTGGGGCACAGGGCTAAGTGTGAG
CTGGGATGTGCAGGCCTGGGCCAGGCTGGCTTCAAAACCACGGTCCTCTTGTGTCAGCCTGCTA
AGTGCTCAGGTCACAGTCCACCAATCCATGACTTTGATGTGTTTAAGGAAAGTAAAGACGAGAA
CTTCTTTGAGTCGCAGGACTCCATCAATGCTCTGTGTACACACTTGCTGCAGCTGAAACCCATC
ACAGACCTTGGGGAAAAACAGATCCAGGACGAGTTCTTCAAACTCCTGCAGATTTCTCTCTGGG
GGAATAAGTGCGACCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAAGGCCGATATAATAAA
TTCTTTGAAAGACCTAAAACCATTCATTTTAGTAAATGAGACAGAATCTCTCTGGGCATTGCTT
AGTAAGTTAAAGAAAACAGCAGAGCCCCCCGCAGTTAGAGTAGACATCGTTCTGGATAATTCTG
GGTTTGAACTGGTTACAGATTTAGTATTTGCAGACTTCTTGTTATCCTCTGAATTAGCTACTGA
GATTCATTTTCATGGGAAAATCATCCCATGGTTTGTGTCTGACGTTACTGTGCGGGACTTTGAG
TGGATAGTTGAGCATATGAAGGGTAGTCATCTGGAGTCCATGTCTGCCTGTGGGGCTGCCTGGG
AGGCCTATGTTGGGATGAAGAAGTGGGTTTACCACGACCATGCCTTTTGGACTCTGCCTCATCC
ATTCTGTGCAATGCCCCAGGTCGCCCCTGACTTATATGCTGAACTGCAAAAGGCAGGTGTTGTT
TTATTTAAGGGAGATTTGAATTATAGGAAGCTGATGGGTGACAGAAAATGGAAGTTCACCGTTC
CATTCCATCAGGCTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATTAGAACATTGAAGTG
TGAGCTTCAGGTTGGGCTGCAGCCTGGGCAGGCCGAGCACCTCACAGCCTCTGACCCCCACTGG
CTGACCACAGGCAAGTATGGAATATTTCAGTTTGATGGGCCACTTTGACTCTACTCAGGAATTC
CTGGTGGCAGAGAATGTTCTGTGAATCTCCCTTCAGCCTCAGAAAAACAGAGCATGGATTCAGG
CCTGGCTTCTCCTCAGCATGGGCAGCCCCATGTCTCAGCTCCTGTGCTACCTTACAGACTGTAG
ATGAGGCTCCTTGGAATGCTTCCCTCCTGCGTTGTTTTGGGTTTTAAGCCAGTTACACTTCTAT
TGGAATTTTAGTCACTATTCCAAGTAAATGCAAACTTTCAAGTGGTTTTAATGAACTCATCTTT
GACTTCAAAGAATGCAAAAATGTGGGTGACTTTGCTTTAAAAACTAATTTAAATGTTAGCAAAT
CTTGTTTTCTTAAACTGGTTGTTTAATACGAGGAAGCTTATTGTTACTTAACTTAAGTTTTGGC
TCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTAAGAGCTCTCCCAGGAGGCGTGTGCATGA
TGCTTGAACACAATTACCTCAGACCTGAACCACAGCCTGCTCTCTCGCATGCATTAAGTTTTTA
AAGCCCATTTTCTTACATAGATTTGTATTTTGATTGATCTATGGAAAGGGTCAAAGCACAAACT
GAACATCTAAACAGTGACTGACAAAGTATGAGTACAGTTGTGTCCCCATTGTCCTTCCGATTGC
CATGGTGACCTCACCACCACAGTGGTGTCCAGATGAAGACAGCTTCAGTTTGCAGTAGCAGACT
TAGATGGAAATGACTGTTGGGCATTGTTTTAGTTACTGCCAAGCTGAGTTCAATCTTCATATCA
CACGTTGTATAGTTCCTCACCTCAGATATAGAGTCTATAAATTCTTGTTACTTTGTTTCAAAAC
AAATTGGAAATAAAGTTGAAATGCTTTCTGTACTGGAATAATAAAATGAATTTTACAGAGAAA

hide sequence

RefSeq Acc Id:

XM_017588870 ⟹ XP_017444359

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	43,299,929 - 43,323,675 (+)	NCBI
mRatBN7.2	1	40,894,558 - 40,918,302 (+)	NCBI
Rnor_6.0	1	40,982,761 - 41,006,371 (+)	NCBI

Sequence:

show sequence

CCATGCTCTGTCCCTGGCCAGGGCACCAAATAAAGTTTCTGAGTTCAAAAGCGCTTTTTACTTT
AAAAAAAAAAAAAAAAAAACTCCAACGCTTTCTTTCTGGGCTCCGTAGCCGTTACCGTTGAACC
CCGAGCAACGCCAGTGAGTGGCGTGTGGCGCCGGCGCGATGGCCGAGTCCCCGGCGTTTCTCTC
CGCTCAGGACGTGGGGAAGGCGTTGAAGCTGAGAAGAAAGCCATCTCTCTTCTTTCTAAATTAC
GGAATGAACTGCAGACAGATAAACCAATTATCCCTTTGGTGGACAAGTGTGTTGACACGGACAT
ATGGAATCAATACCTGGAATATCAGCGGAGCCTTTTAAATGAAGGAGACGGGGAGCCACGTTGG
TTCTTCTCGCCCTGGTTGTTCGTAGAATGCTACATGTATCGGAGAATTCATGAAGCCATCATGC
AGAGTCCACCAATCCATGACTTTGATGTGTTTAAGGAAAGTAAAGACGAGAACTTCTTTGAGTC
GCAGGACTCCATCAATGCTCTGTGTACACACTTGCTGCAGCTGAAACCCATCACAGACCTTGGG
GAAAAACAGATCCAGGACGAGTTCTTCAAACTCCTGCAGATTTCTCTCTGGGGGAATAAGTGCG
ACCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAAGGCCGATATAATAAATTCTTTGAAAGA
CCTAAAACCATTCATTTTAGTAAATGAGACAGAATCTCTCTGGGCATTGCTTAGTAAGTTAAAG
AAAACAGCAGAGCCCCCCGCAGTTAGAGTAGACATCGTTCTGGATAATTCTGGGTTTGAACTGG
TTACAGATTTAGTATTTGCAGACTTCTTGTTATCCTCTGAATTAGCTACTGAGATTCATTTTCA
TGGGAAAATCATCCCATGGTTTGTGTCTGACGTTACTGTGCGGGACTTTGAGTGGATAGTTGAG
CATATGAAGGGTAGTCATCTGGAGTCCATGTCTGCCTGTGGGGCTGCCTGGGAGGCCTATGTTG
GGATGAAGAAGTGGGTTTACCACGACCATGCCTTTTGGACTCTGCCTCATCCATTCTGTGCAAT
GCCCCAGGTCGCCCCTGACTTATATGCTGAACTGCAAAAGGCAGGTGTTGTTTTATTTAAGGGA
GATTTGAATTATAGGAAGCTGATGGGTGACAGAAAATGGAAGTTCACCGTTCCATTCCATCAGG
CTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATTAGAACATTGAAGTGTGAGCTTCAGGT
TGGGCTGCAGCCTGGGCAGGCCGAGCACCTCACAGCCTCTGACCCCCACTGGCTGACCACAGGC
AAGTATGGAATATTTCAGTTTGATGGGCCACTTTGACTCTACTCAGGAATTCCTGGTGGCAGAG
AATGTTCTGTGAATCTCCCTTCAGCCTCAGAAAAACAGAGCATGGATTCAGGCCTGGCTTCTCC
TCAGCATGGGCAGCCCCATGTCTCAGCTCCTGTGCTACCTTACAGACTGTAGATGAGGCTCCTT
GGAATGCTTCCCTCCTGCGTTGTTTTGGGTTTTAAGCCAGTTACACTTCTATTGGAATTTTAGT
CACTATTCCAAGTAAATGCAAACTTTCAAGTGGTTTTAATGAACTCATCTTTGACTTCAAAGAA
TGCAAAAATGTGGGTGACTTTGCTTTAAAAACTAATTTAAATGTTAGCAAATCTTGTTTTCTTA
AACTGGTTGTTTAATACGAGGAAGCTTATTGTTACTTAACTTAAGTTTTGGCTCTTGAGTTAGT
GGCCCAGTGAACACATGCCTTGTAAGAGCTCTCCCAGGAGGCGTGTGCATGATGCTTGAACACA
ATTACCTCAGACCTGAACCACAGCCTGCTCTCTCGCATGCATTAAGTTTTTAAAGCCCATTTTC
TTACATAGATTTGTATTTTGATTGATCTATGGAAAGGGTCAAAGCACAAACTGAACATCTAAAC
AGTGACTGACAAAGTATGAGTACAGTTGTGTCCCCATTGTCCTTCCGATTGCCATGGTGACCTC
ACCACCACAGTGGTGTCCAGATGAAGACAGCTTCAGTTTGCAGTAGCAGACTTAGATGGAAATG
ACTGTTGGGCATTGTTTTAGTTACTGCCAAGCTGAGTTCAATCTTCATATCACACGTTGTATAG
TTCCTCACCTCAGATATAGAGTCTATAAATTCTTGTTACTTTGTTTCAAAACAAATTGGAAATA
AAGTTGAAATGCTTTCTGTACTGGAATAATAAAATGAATTTTACAGAGAAA

hide sequence

RefSeq Acc Id:

XR_010064171

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	43,299,916 - 43,319,037 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001017447	(Get FASTA)	NCBI Sequence Viewer
	XP_006227895	(Get FASTA)	NCBI Sequence Viewer
	XP_017444359	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH78920	(Get FASTA)	NCBI Sequence Viewer
	EDL92861	(Get FASTA)	NCBI Sequence Viewer
	EDL92862	(Get FASTA)	NCBI Sequence Viewer
	EDL92863	(Get FASTA)	NCBI Sequence Viewer
	EDL92864	(Get FASTA)	NCBI Sequence Viewer
	EDL92865	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000026367
	ENSRNOP00000026367.4
GenBank Protein	Q6AYT5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001017447 ⟸ NM_001017447

- UniProtKB:

Q6AYT5 (UniProtKB/Swiss-Prot), A6KIL4 (UniProtKB/TrEMBL), A0A8I6A1F9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAESPAFLSAQDVGSFAYLTIKDRTPQILTKVIDTLHRHKSEFFEKHGEEGVEAEKKAISLLSK
LRNELQTDKPIIPLVDKCVDTDIWNQYLEYQRSLLNEGDGEPRWFFSPWLFVECYMYRRIHEAI
MQSPPIHDFDVFKESKDENFFESQDSINALCTHLLQLKPITDLGEKQIQDEFFKLLQISLWGNK
CDLSLSGGESSSQKADIINSLKDLKPFILVNETESLWALLSKLKKTAEPPAVRVDIVLDNSGFE
LVTDLVFADFLLSSELATEIHFHGKIIPWFVSDVTVRDFEWIVEHMKGSHLESMSACGAAWEAY
VGMKKWVYHDHAFWTLPHPFCAMPQVAPDLYAELQKAGVVLFKGDLNYRKLMGDRKWKFTVPFH
QALSGFHPAPLCSIRTLKCELQVGLQPGQAEHLTASDPHWLTTGKYGIFQFDGPL

hide sequence

RefSeq Acc Id:	XP_006227895 ⟸ XM_006227833
- Peptide Label:	isoform X1
- UniProtKB:	A6KIL7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRVPQAERGVSDIAGHDLTMRGGSPWLLGYVTSSEEQGLGHRAKCELGCAGLGQAGFKTTVLLC QPAKCSGHSPPIHDFDVFKESKDENFFESQDSINALCTHLLQLKPITDLGEKQIQDEFFKLLQI SLWGNKCDLSLSGGESSSQKADIINSLKDLKPFILVNETESLWALLSKLKKTAEPPAVRVDIVL DNSGFELVTDLVFADFLLSSELATEIHFHGKIIPWFVSDVTVRDFEWIVEHMKGSHLESMSACG AAWEAYVGMKKWVYHDHAFWTLPHPFCAMPQVAPDLYAELQKAGVVLFKGDLNYRKLMGDRKWK FTVPFHQALSGFHPAPLCSIRTLKCELQVGLQPGQAEHLTASDPHWLTTGKYGIFQFDGPL hide sequence

RefSeq Acc Id:	XP_017444359 ⟸ XM_017588870
- Peptide Label:	isoform X2
- UniProtKB:	A6KIL7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYRRIHEAIMQSPPIHDFDVFKESKDENFFESQDSINALCTHLLQLKPITDLGEKQIQDEFFKL LQISLWGNKCDLSLSGGESSSQKADIINSLKDLKPFILVNETESLWALLSKLKKTAEPPAVRVD IVLDNSGFELVTDLVFADFLLSSELATEIHFHGKIIPWFVSDVTVRDFEWIVEHMKGSHLESMS ACGAAWEAYVGMKKWVYHDHAFWTLPHPFCAMPQVAPDLYAELQKAGVVLFKGDLNYRKLMGDR KWKFTVPFHQALSGFHPAPLCSIRTLKCELQVGLQPGQAEHLTASDPHWLTTGKYGIFQFDGPL hide sequence

Ensembl Acc Id:

ENSRNOP00000075976 ⟸ ENSRNOT00000092809

Ensembl Acc Id:

ENSRNOP00000076009 ⟸ ENSRNOT00000092953

Ensembl Acc Id:

ENSRNOP00000026367 ⟸ ENSRNOT00000026367

Ensembl Acc Id:

ENSRNOP00000086037 ⟸ ENSRNOT00000093943

Protein Domains

Damage-control phosphatase ARMT1-like metal-binding

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AYT5-F1-model_v2	AlphaFold	Q6AYT5	1-439	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13689587

Promoter ID:

EPDNEW_R112

Type:

initiation region

Name:

Armt1_1

Description:

acidic residue methyltransferase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	40,982,884 - 40,982,944	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305235	AgrOrtholog
BioCyc Gene	G2FUF-61716	BioCyc
Ensembl Genes	ENSRNOG00000019489	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000026367	ENTREZGENE
	ENSRNOT00000026367.7	UniProtKB/Swiss-Prot
Gene3D-CATH	1.20.930.60	UniProtKB/Swiss-Prot
	Uncharacterised protein PF01937, DUF89, domain 3	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7096641	IMAGE-MGC_LOAD
InterPro	AF1104-like_sf	UniProtKB/Swiss-Prot
	ARMT1	UniProtKB/Swiss-Prot
	DUF89	UniProtKB/Swiss-Prot
KEGG Report	rno:292267	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93699	IMAGE-MGC_LOAD
NCBI Gene	292267	ENTREZGENE
PANTHER	DAMAGE-CONTROL PHOSPHATASE ARMT1	UniProtKB/Swiss-Prot
	PTHR12260	UniProtKB/Swiss-Prot
Pfam	DUF89	UniProtKB/Swiss-Prot
PhenoGen	Armt1	PhenoGen
RatGTEx	ENSRNOG00000019489	RatGTEx
Superfamily-SCOP	SSF111321	UniProtKB/Swiss-Prot
UniProt	A0A1B0GWP8_RAT	UniProtKB/TrEMBL
	A0A8I5ZWM4_RAT	UniProtKB/TrEMBL
	A0A8I6A1F9	ENTREZGENE, UniProtKB/TrEMBL
	A6KIL4	ENTREZGENE, UniProtKB/TrEMBL
	A6KIL7	ENTREZGENE, UniProtKB/TrEMBL
	ARMT1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-03-16	Armt1	acidic residue methyltransferase 1	RGD1305235	similar to RIKEN cDNA 1700052N19	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1305235	similar to RIKEN cDNA 1700052N19	RGD1305235_predicted	similar to RIKEN cDNA 1700052N19 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1305235_predicted	similar to RIKEN cDNA 1700052N19 (predicted)	LOC292267_predicted	similar to RIKEN cDNA 1700052N19 (predicted)	Symbol and Name status set to approved	1331353	APPROVED
2005-01-20	RGD1305235_predicted	similar to RIKEN cDNA 1700052N19 (predicted)	LOC292267_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC292267_predicted	similar to RIKEN cDNA 1700052N19 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar