Armt1 (acidic residue methyltransferase 1) - Rat Genome Database

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Gene: Armt1 (acidic residue methyltransferase 1) Rattus norvegicus
Analyze
Symbol: Armt1
Name: acidic residue methyltransferase 1
RGD ID: 1305235
Description: Predicted to enable enzyme binding activity; methyltransferase activity; and phosphatase activity. Predicted to be involved in DNA damage response. Orthologous to human ARMT1 (acidic residue methyltransferase 1); INTERACTS WITH 3,4-methylenedioxymethamphetamine; bisphenol A; buspirone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: damage-control phosphatase ARMT1; hypothetical protein LOC292267; LOC292267; protein-glutamate O-methyltransferase; RGD1305235; similar to RIKEN cDNA 1700052N19; sugar phosphate phosphatase ARMT1; UPF0364 protein C6orf211 homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8143,299,916 - 43,323,675 (+)NCBIGRCr8
mRatBN7.2140,894,558 - 40,918,302 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl140,894,550 - 40,918,302 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx141,421,844 - 41,445,577 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0147,409,040 - 47,432,775 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0141,497,330 - 41,521,058 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0140,982,761 - 41,006,371 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl140,982,862 - 41,006,371 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,325,061 - 42,348,570 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4135,143,718 - 35,169,030 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1135,146,662 - 35,171,972 (+)NCBI
Celera136,585,729 - 36,608,806 (+)NCBICelera
Cytogenetic Map1q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
DNA damage response  (IBA,IEA,ISO,ISS)
methylation  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:25732820  


Genomics

Comparative Map Data
Armt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8143,299,916 - 43,323,675 (+)NCBIGRCr8
mRatBN7.2140,894,558 - 40,918,302 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl140,894,550 - 40,918,302 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx141,421,844 - 41,445,577 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0147,409,040 - 47,432,775 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0141,497,330 - 41,521,058 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0140,982,761 - 41,006,371 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl140,982,862 - 41,006,371 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,325,061 - 42,348,570 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4135,143,718 - 35,169,030 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1135,146,662 - 35,171,972 (+)NCBI
Celera136,585,729 - 36,608,806 (+)NCBICelera
Cytogenetic Map1q11NCBI
ARMT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386151,452,466 - 151,470,101 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6151,452,258 - 151,470,101 (+)EnsemblGRCh38hg38GRCh38
GRCh376151,773,601 - 151,791,236 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366151,815,115 - 151,832,925 (+)NCBINCBI36Build 36hg18NCBI36
Build 346151,865,535 - 151,883,346NCBI
Celera6152,507,286 - 152,525,096 (+)NCBICelera
Cytogenetic Map6q25.1NCBI
HuRef6149,335,454 - 149,353,292 (+)NCBIHuRef
CHM1_16152,037,567 - 152,055,377 (+)NCBICHM1_1
T2T-CHM13v2.06152,653,108 - 152,670,749 (+)NCBIT2T-CHM13v2.0
Armt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39104,382,572 - 4,405,140 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl104,382,467 - 4,405,141 (+)EnsemblGRCm39 Ensembl
GRCm38104,429,275 - 4,455,140 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl104,432,467 - 4,455,141 (+)EnsemblGRCm38mm10GRCm38
MGSCv37105,891,401 - 5,913,936 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36105,891,400 - 5,914,074 (-)NCBIMGSCv36mm8
Celera104,361,934 - 4,384,544 (+)NCBICelera
Cytogenetic Map10A1NCBI
cM Map102.06NCBI
Armt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543910,138,804 - 10,151,086 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543910,136,393 - 10,151,178 (-)NCBIChiLan1.0ChiLan1.0
ARMT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25171,475,215 - 171,493,101 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16169,367,160 - 169,389,701 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06149,268,840 - 149,286,618 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16153,965,211 - 153,983,027 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6153,965,211 - 153,983,027 (+)Ensemblpanpan1.1panPan2
ARMT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1141,799,853 - 41,814,684 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl141,799,868 - 41,813,766 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha142,641,018 - 42,655,865 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0141,984,751 - 41,999,589 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl141,984,839 - 41,999,589 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1141,858,197 - 41,873,274 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0141,702,126 - 41,716,752 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0142,208,654 - 42,223,726 (+)NCBIUU_Cfam_GSD_1.0
Armt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946137,092,082 - 137,103,421 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364894,344,365 - 4,355,484 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364894,344,074 - 4,355,405 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARMT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl114,772,610 - 14,795,318 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1114,777,131 - 14,795,323 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2117,190,304 - 17,206,671 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARMT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11378,912,208 - 78,929,746 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1378,911,651 - 78,929,897 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604051,243,196 - 51,260,722 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Armt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247856,801,512 - 6,814,680 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Armt1
25 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:106
Count of miRNA genes:76
Interacting mature miRNAs:94
Transcripts:ENSRNOT00000026367
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)13523959878430678Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1357397Bw41Body weight QTL 414.190.0001body mass (VT:0001259)body weight (CMO:0000012)12234064749361612Rat
1578650Bmd6Bone mineral density QTL 612.2femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)150910843284926Rat
1578651Bmd7Bone mineral density QTL 714.2femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)150910843284926Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)13523959878430678Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)11148131282174945Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)13344984878449848Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
7421626Bp360Blood pressure QTL 3600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1439328949393289Rat
1357400Bw62Body weight QTL624.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)12234064767340647Rat
1357401Bw43Body weight QTL 433.75body mass (VT:0001259)body weight (CMO:0000012)12234064749361612Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
631494Bp95Blood pressure QTL 95400.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)11620621049268520Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)11148131282174945Rat
5684998Bss101Bone structure and strength QTL 1013.6tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)11543162149361612Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
5684999Bss102Bone structure and strength QTL 1025.57e-07tibia strength trait (VT:1000284)tibia stiffness (CMO:0001735)11543162149361612Rat
1300167Hrtrt2Heart rate QTL 24.35heart pumping trait (VT:2000009)heart rate (CMO:0000002)11148131275088344Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)11148131282174945Rat
1578756Iddm22Insulin dependent diabetes mellitus QTL 222.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)11183518156835181Rat
631508Sald1Serum aldosterone level QTL 13.7blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)1985600154856001Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)12887978078430678Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
724520Bp145Blood pressure QTL 1452.10.0024arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12078482865784828Rat
1558642Prcr2Prostate cancer resistance QTL 24.3prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)12076315844095856Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)11148131282174945Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)13483685879836858Rat
738020Pia8Pristane induced arthritis QTL 84.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1165833076Rat
1600360Mcs16Mammary carcinoma susceptibility QTL 162.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1224439043433040Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)13344984878449848Rat
1578669Bss9Bone structure and strength QTL 96.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)150910843284926Rat
2302038Pia31Pristane induced arthritis QTL 315.50.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)11099206555992065Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
634353Rends2Renal damage susceptibility QTL 20.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)11933357156983283Rat

Markers in Region
RH137544  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2140,901,646 - 40,901,786 (+)MAPPERmRatBN7.2
Rnor_6.0140,989,931 - 40,990,070NCBIRnor6.0
Rnor_5.0142,332,130 - 42,332,269UniSTSRnor5.0
Celera136,592,799 - 36,592,938UniSTS
Cytogenetic Map1p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000026367   ⟹   ENSRNOP00000026367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl140,894,550 - 40,918,302 (+)Ensembl
Rnor_6.0 Ensembl140,982,862 - 41,006,371 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000092809   ⟹   ENSRNOP00000075976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl140,894,616 - 40,913,637 (+)Ensembl
Rnor_6.0 Ensembl140,982,900 - 41,001,511 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000092953   ⟹   ENSRNOP00000076009
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl140,982,906 - 40,990,149 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093126
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl140,910,788 - 40,916,725 (+)Ensembl
Rnor_6.0 Ensembl140,998,636 - 41,004,790 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093943   ⟹   ENSRNOP00000086037
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl140,896,960 - 40,918,302 (+)Ensembl
RefSeq Acc Id: NM_001017447   ⟹   NP_001017447
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8143,299,949 - 43,323,675 (+)NCBI
mRatBN7.2140,894,578 - 40,918,302 (+)NCBI
Rnor_6.0140,982,862 - 41,006,371 (+)NCBI
Rnor_5.0142,325,061 - 42,348,570 (+)NCBI
RGSC_v3.4135,143,718 - 35,169,030 (+)RGD
Celera136,585,729 - 36,608,806 (+)RGD
Sequence:
RefSeq Acc Id: XM_006227833   ⟹   XP_006227895
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8143,315,399 - 43,323,675 (+)NCBI
mRatBN7.2140,909,989 - 40,918,302 (+)NCBI
Rnor_6.0140,997,528 - 41,006,371 (+)NCBI
Rnor_5.0142,325,061 - 42,348,570 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017588870   ⟹   XP_017444359
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8143,299,929 - 43,323,675 (+)NCBI
mRatBN7.2140,894,558 - 40,918,302 (+)NCBI
Rnor_6.0140,982,761 - 41,006,371 (+)NCBI
Sequence:
RefSeq Acc Id: XR_010064171
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8143,299,916 - 43,319,037 (+)NCBI
RefSeq Acc Id: NP_001017447   ⟸   NM_001017447
- UniProtKB: Q6AYT5 (UniProtKB/Swiss-Prot),   A6KIL4 (UniProtKB/TrEMBL),   A0A8I6A1F9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006227895   ⟸   XM_006227833
- Peptide Label: isoform X1
- UniProtKB: A6KIL7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017444359   ⟸   XM_017588870
- Peptide Label: isoform X2
- UniProtKB: A6KIL7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075976   ⟸   ENSRNOT00000092809
Ensembl Acc Id: ENSRNOP00000076009   ⟸   ENSRNOT00000092953
Ensembl Acc Id: ENSRNOP00000026367   ⟸   ENSRNOT00000026367
Ensembl Acc Id: ENSRNOP00000086037   ⟸   ENSRNOT00000093943
Protein Domains
Damage-control phosphatase ARMT1-like metal-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYT5-F1-model_v2 AlphaFold Q6AYT5 1-439 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13689587
Promoter ID:EPDNEW_R112
Type:initiation region
Name:Armt1_1
Description:acidic residue methyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0140,982,884 - 40,982,944EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305235 AgrOrtholog
BioCyc Gene G2FUF-61716 BioCyc
Ensembl Genes ENSRNOG00000019489 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055021543 UniProtKB/Swiss-Prot
  ENSRNOG00060007912 UniProtKB/Swiss-Prot
  ENSRNOG00065030134 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000026367.7 UniProtKB/Swiss-Prot
  ENSRNOT00000092809.2 UniProtKB/TrEMBL
  ENSRNOT00000093126.2 UniProtKB/TrEMBL
  ENSRNOT00000093943.1 UniProtKB/TrEMBL
  ENSRNOT00055036818 UniProtKB/Swiss-Prot
  ENSRNOT00060013074 UniProtKB/Swiss-Prot
  ENSRNOT00065052042 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.930.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Uncharacterised protein PF01937, DUF89, domain 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7096641 IMAGE-MGC_LOAD
InterPro AF1104-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARMT1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARMT1-like_metal-bd UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
KEGG Report rno:292267 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:93699 IMAGE-MGC_LOAD
NCBI Gene 292267 ENTREZGENE
PANTHER DAMAGE-CONTROL PHOSPHATASE ARMT1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12260 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ARMT1-like_dom UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
PhenoGen Armt1 PhenoGen
RatGTEx ENSRNOG00000019489 RatGTEx
  ENSRNOG00055021543 RatGTEx
  ENSRNOG00060007912 RatGTEx
  ENSRNOG00065030134 RatGTEx
Superfamily-SCOP SSF111321 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1B0GWP8_RAT UniProtKB/TrEMBL
  A0A8I5ZWM4_RAT UniProtKB/TrEMBL
  A0A8I6A1F9 ENTREZGENE, UniProtKB/TrEMBL
  A6KIL4 ENTREZGENE, UniProtKB/TrEMBL
  A6KIL7 ENTREZGENE, UniProtKB/TrEMBL
  ARMT1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-03-16 Armt1  acidic residue methyltransferase 1  RGD1305235  similar to RIKEN cDNA 1700052N19  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1305235  similar to RIKEN cDNA 1700052N19  RGD1305235_predicted  similar to RIKEN cDNA 1700052N19 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1305235_predicted  similar to RIKEN cDNA 1700052N19 (predicted)  LOC292267_predicted  similar to RIKEN cDNA 1700052N19 (predicted)  Symbol and Name status set to approved 1331353 APPROVED
2005-01-20 RGD1305235_predicted  similar to RIKEN cDNA 1700052N19 (predicted)  LOC292267_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC292267_predicted  similar to RIKEN cDNA 1700052N19 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL