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Gene: Armt1 (acidic residue methyltransferase 1) Rattus norvegicus

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Symbol:

Armt1

Name:

acidic residue methyltransferase 1

RGD ID:

1305235

Description:

Predicted to enable enzyme binding activity; methyltransferase activity; and phosphatase activity. Predicted to be involved in DNA damage response. Orthologous to human ARMT1 (acidic residue methyltransferase 1); INTERACTS WITH 3,4-methylenedioxymethamphetamine; bisphenol A; buspirone.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

damage-control phosphatase ARMT1; hypothetical protein LOC292267; LOC292267; protein-glutamate O-methyltransferase; RGD1305235; similar to RIKEN cDNA 1700052N19; sugar phosphate phosphatase ARMT1; UPF0364 protein C6orf211 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ARMT1 (acidic residue methyltransferase 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Armt1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Armt1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ARMT1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ARMT1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Armt1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ARMT1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ARMT1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Armt1 (acidic residue methyltransferase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ARMT1 (acidic residue methyltransferase 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Armt1 (acidic residue methyltransferase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	armt1 (acidic residue methyltransferase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG11474	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG11475	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG2921	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG4161	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F31D4.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YMR027W	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	armt1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	43,299,916 - 43,323,675 (+)	NCBI		GRCr8
mRatBN7.2	1	40,894,558 - 40,918,302 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	40,894,550 - 40,918,302 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	41,421,844 - 41,445,577 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	47,409,040 - 47,432,775 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	41,497,330 - 41,521,058 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	40,982,761 - 41,006,371 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	40,982,862 - 41,006,371 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	42,325,061 - 42,348,570 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	35,143,718 - 35,169,030 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	35,146,662 - 35,171,972 (+)	NCBI
Celera	1	36,585,729 - 36,608,806 (+)	NCBI		Celera
Cytogenetic Map	1	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Armt1	Rat	chromosome 6q24-q25 deletion syndrome		ISO	ARMT1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chromosome 6q24-q25 deletion syndrome	ClinVar	PMID:25741868 and PMID:38177409

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Armt1	Rat	3,4-methylenedioxymethamphetamine	increases expression	EXP		6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of ARMT1 mRNA	CTD	PMID:30071829
Armt1	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	ARMT1 (Homo sapiens)	6480464	bisphenol S results in increased expression of ARMT1 protein	CTD	PMID:34186270
Armt1	Rat	acrylamide	increases expression	ISO	ARMT1 (Homo sapiens)	6480464	Acrylamide results in increased expression of ARMT1 mRNA	CTD	PMID:32763439
Armt1	Rat	all-trans-retinoic acid	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	Tretinoin results in decreased expression of ARMT1 mRNA	CTD	PMID:33167477
Armt1	Rat	aristolochic acid A	increases expression	ISO	ARMT1 (Homo sapiens)	6480464	aristolochic acid I results in increased expression of ARMT1 protein	CTD	PMID:33212167
Armt1	Rat	arsane	multiple interactions	ISO	ARMT1 (Homo sapiens)	6480464	[sodium arsenite results in increased abundance of Arsenic] which results in increased expression of ARMT1 mRNA	CTD	PMID:39836092
Armt1	Rat	arsenic atom	multiple interactions	ISO	ARMT1 (Homo sapiens)	6480464	[sodium arsenite results in increased abundance of Arsenic] which results in increased expression of ARMT1 mRNA	CTD	PMID:39836092
Armt1	Rat	benzatropine	increases expression	ISO	ARMT1 (Homo sapiens)	6480464	Benztropine results in increased expression of ARMT1 protein	CTD	PMID:34122009
Armt1	Rat	beta-lapachone	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	beta-lapachone results in decreased expression of ARMT1 mRNA	CTD	PMID:38218311
Armt1	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of ARMT1 mRNA	CTD	PMID:34947998
Armt1	Rat	bisphenol AF	increases expression	ISO	ARMT1 (Homo sapiens)	6480464	bisphenol AF results in increased expression of ARMT1 protein	CTD	PMID:34186270
Armt1	Rat	buspirone	decreases expression	EXP		6480464	Buspirone results in decreased expression of ARMT1 mRNA	CTD	PMID:24136188
Armt1	Rat	cisplatin	increases expression	ISO	ARMT1 (Homo sapiens)	6480464	Cisplatin results in increased expression of ARMT1 mRNA	CTD	PMID:27594783
Armt1	Rat	clozapine	increases expression	ISO	ARMT1 (Homo sapiens)	6480464	Clozapine results in increased expression of ARMT1 protein	CTD	PMID:34122009
Armt1	Rat	copper(II) sulfate	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	Copper Sulfate results in decreased expression of ARMT1 mRNA	CTD	PMID:19549813
Armt1	Rat	cyclosporin A	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	Cyclosporine results in decreased expression of ARMT1 mRNA	CTD	PMID:20106945 and PMID:25562108
Armt1	Rat	Dibutyl phosphate	affects expression	ISO	ARMT1 (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of ARMT1 mRNA	CTD	PMID:37042841
Armt1	Rat	dicrotophos	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	dicrotophos results in decreased expression of ARMT1 mRNA	CTD	PMID:28302478
Armt1	Rat	doxorubicin	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	Doxorubicin results in decreased expression of ARMT1 mRNA	CTD	PMID:29803840
Armt1	Rat	ethanol	increases expression	ISO	Armt1 (Mus musculus)	6480464	Ethanol results in increased expression of ARMT1 mRNA	CTD	PMID:30319688
Armt1	Rat	hydrogen peroxide	affects expression	ISO	ARMT1 (Homo sapiens)	6480464	Hydrogen Peroxide affects the expression of ARMT1 mRNA	CTD	PMID:20044591
Armt1	Rat	ivermectin	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	Ivermectin results in decreased expression of ARMT1 protein	CTD	PMID:32959892
Armt1	Rat	nickel atom	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	Nickel results in decreased expression of ARMT1 mRNA	CTD	PMID:23195993
Armt1	Rat	ozone	multiple interactions	ISO	ARMT1 (Homo sapiens)	6480464	[Air Pollutants results in increased abundance of Ozone] which affects the expression of ARMT1 mRNA	CTD	PMID:35430440
Armt1	Rat	perfluorooctane-1-sulfonic acid	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	perfluorooctane sulfonic acid results in decreased expression of ARMT1 mRNA	CTD	PMID:27153767
Armt1	Rat	quercetin	decreases expression	ISO	ARMT1 (Homo sapiens)	6480464	Quercetin results in decreased expression of ARMT1 mRNA	CTD	PMID:21632981
Armt1	Rat	resveratrol	multiple interactions	ISO	ARMT1 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in increased expression of ARMT1 mRNA	CTD	PMID:23557933
Armt1	Rat	sodium arsenite	multiple interactions	ISO	ARMT1 (Homo sapiens)	6480464	[sodium arsenite results in increased abundance of Arsenic] which results in increased expression of ARMT1 mRNA	CTD	PMID:39836092
Armt1	Rat	titanium dioxide	increases expression	ISO	Armt1 (Mus musculus)	6480464	titanium dioxide results in increased expression of ARMT1 mRNA	CTD	PMID:35295148
Armt1	Rat	triptonide	decreases expression	ISO	Armt1 (Mus musculus)	6480464	triptonide results in decreased expression of ARMT1 mRNA	CTD	PMID:33045310
Armt1	Rat	trovafloxacin	decreases expression	EXP		6480464	trovafloxacin results in decreased expression of ARMT1 mRNA	CTD	PMID:24136188
Armt1	Rat	valproic acid	decreases methylation	ISO	ARMT1 (Homo sapiens)	6480464	Valproic Acid results in decreased methylation of ARMT1 gene	CTD	PMID:29154799
Armt1	Rat	valproic acid	increases expression	ISO	ARMT1 (Homo sapiens)	6480464	Valproic Acid results in increased expression of ARMT1 mRNA	CTD	PMID:19101580 and PMID:23179753
Armt1	Rat	valproic acid	affects expression	ISO	ARMT1 (Homo sapiens)	6480464	Valproic Acid affects the expression of ARMT1 mRNA	CTD	PMID:25979313

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Armt1	Rat	DNA damage response	involved_in	IBA	PANTHER:PTN000262496 and UniProtKB:Q9H993	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Armt1	Rat	DNA damage response	involved_in	IEA	UniProtKB-KW:KW-0227	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Armt1	Rat	DNA damage response	involved_in	ISO	ARMT1 (Homo sapiens)	1624291	PMID:25732820	RGD	PMID:25732820
Armt1	Rat	DNA damage response	involved_in	ISS	UniProtKB:Q9H993	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Armt1	Rat	DNA damage response	involved_in	IEA	UniProtKB:Q9H993 and ensembl:ENSP00000356263	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Armt1	Rat	methylation	involved_in	IEA	UniProtKB-KW:KW-0489	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Armt1	Rat	enzyme binding	enables	IEA	UniProtKB:Q9H993 and ensembl:ENSP00000356263	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Armt1	Rat	enzyme binding	enables	ISO	ARMT1 (Homo sapiens)	1624291	UniProtKB:Q9H993 and PMID:25732820	RGD	PMID:25732820
Armt1	Rat	fructose 6-phosphate aldolase activity	enables	IEA	RHEA:28002	1600115	GO_REF:0000116	RHEA	GO_REF:0000116
Armt1	Rat	fructose-1-phosphatase activity	enables	IEA	RHEA:35603	1600115	GO_REF:0000116	RHEA	GO_REF:0000116
Armt1	Rat	hydrolase activity	enables	IEA	UniProtKB-KW:KW-0378	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Armt1	Rat	metal ion binding	enables	IEA	UniProtKB-KW:KW-0479	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Armt1	Rat	metal ion binding	enables	IEA	UniRule:UR001350770	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Armt1	Rat	methyltransferase activity	enables	IEA	UniProtKB-KW:KW-0489	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Armt1	Rat	phosphatase activity	enables	IBA	PANTHER:PTN000262496 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Armt1	Rat	protein binding	enables	ISO	ARMT1 (Homo sapiens)	1624291	UniProtKB:Q08209-2 more ...	RGD	PMID:25732820 more ...
Armt1	Rat	protein carboxyl O-methyltransferase activity	enables	IEA	UniRule:UR001350770	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Armt1	Rat	protein carboxyl O-methyltransferase activity	enables	IEA	UniProtKB:Q9H993 and ensembl:ENSP00000356263	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Armt1	Rat	protein carboxyl O-methyltransferase activity	enables	ISO	ARMT1 (Homo sapiens)	1624291	PMID:25732820	RGD	PMID:25732820
Armt1	Rat	protein carboxyl O-methyltransferase activity	enables	ISS	UniProtKB:Q9H993	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Armt1	Rat	protein-glutamate O-methyltransferase activity	enables	IEA	RHEA:24452	1600115	GO_REF:0000116	RHEA	GO_REF:0000116
Armt1	Rat	S-adenosylmethionine-dependent methyltransferase activity	enables	ISS	UniProtKB:Q9H993	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Armt1	Rat	S-adenosylmethionine-dependent methyltransferase activity	enables	ISO	ARMT1 (Homo sapiens)	1624291	PMID:25732820	RGD	PMID:25732820
Armt1	Rat	S-adenosylmethionine-dependent methyltransferase activity	enables	IEA	UniProtKB:Q9H993 and ensembl:ENSP00000356263	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Armt1	Rat	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:12477932	PMID:15489334	PMID:25732820

Armt1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	43,299,916 - 43,323,675 (+)	NCBI		GRCr8
mRatBN7.2	1	40,894,558 - 40,918,302 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	40,894,550 - 40,918,302 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	41,421,844 - 41,445,577 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	47,409,040 - 47,432,775 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	41,497,330 - 41,521,058 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	40,982,761 - 41,006,371 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	40,982,862 - 41,006,371 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	42,325,061 - 42,348,570 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	35,143,718 - 35,169,030 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	35,146,662 - 35,171,972 (+)	NCBI
Celera	1	36,585,729 - 36,608,806 (+)	NCBI		Celera
Cytogenetic Map	1	q11	NCBI

ARMT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	151,452,466 - 151,470,101 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	151,452,258 - 151,470,101 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	151,773,601 - 151,791,236 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	151,815,115 - 151,832,925 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	151,865,535 - 151,883,346	NCBI
Celera	6	152,507,286 - 152,525,096 (+)	NCBI		Celera
Cytogenetic Map	6	q25.1	NCBI
HuRef	6	149,335,454 - 149,353,292 (+)	NCBI		HuRef
CHM1_1	6	152,037,567 - 152,055,377 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	152,653,108 - 152,670,749 (+)	NCBI		T2T-CHM13v2.0

Armt1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	4,382,572 - 4,405,140 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	4,382,467 - 4,405,141 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	4,429,275 - 4,455,140 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	4,432,467 - 4,455,141 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	5,891,401 - 5,913,936 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	5,891,400 - 5,914,074 (-)	NCBI		MGSCv36	mm8
Celera	10	4,361,934 - 4,384,544 (+)	NCBI		Celera
Cytogenetic Map	10	A1	NCBI
cM Map	10	2.06	NCBI

Armt1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955439	10,138,804 - 10,151,086 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955439	10,136,393 - 10,151,178 (-)	NCBI	ChiLan1.0	ChiLan1.0

ARMT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	171,475,215 - 171,493,101 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	169,367,160 - 169,389,701 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	149,268,840 - 149,286,618 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	153,965,211 - 153,983,027 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	153,965,211 - 153,983,027 (+)	Ensembl	panpan1.1		panPan2

ARMT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	41,799,853 - 41,814,684 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	41,799,868 - 41,813,766 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	42,641,018 - 42,655,865 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	41,984,751 - 41,999,589 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	41,984,839 - 41,999,589 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	41,858,197 - 41,873,274 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	41,702,126 - 41,716,752 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	42,208,654 - 42,223,726 (+)	NCBI		UU_Cfam_GSD_1.0

Armt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	137,092,082 - 137,103,421 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936489	4,344,365 - 4,355,484 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936489	4,344,074 - 4,355,405 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARMT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	14,772,610 - 14,795,318 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	14,777,131 - 14,795,323 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	17,190,304 - 17,206,671 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARMT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	78,912,208 - 78,929,746 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	78,911,651 - 78,929,897 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	51,243,196 - 51,260,722 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Armt1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624785	6,801,512 - 6,814,680 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Armt1
25 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	106
Count of miRNA genes:	76
Interacting mature miRNAs:	94
Transcripts:	ENSRNOT00000026367
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331732	Srn4	Serum renin concentration QTL 4	4.467		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	1	35239598	78430678	Rat
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	5925874	115540829	Rat
1357397	Bw41	Body weight QTL 41	4.19	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	22340647	49361612	Rat
1578650	Bmd6	Bone mineral density QTL 6	12.2		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	1	509108	43284926	Rat
1578651	Bmd7	Bone mineral density QTL 7	14.2		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	1	509108	43284926	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	30882023	123479925	Rat
1331792	Rf29	Renal function QTL 29	4.589		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	1	35239598	78430678	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	11481312	82174945	Rat
8552900	Pigfal1	Plasma insulin-like growth factor 1 level QTL 1	7.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	34836858	79836858	Rat
1554320	Bmd1	Bone mineral density QTL 1	12.2	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	509108	86060548	Rat
1354643	Foco2	Food consumption QTL 2	7.17	0.0001	eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	1	33449848	78449848	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	4393289	49393289	Rat
1357400	Bw62	Body weight QTL62	4.05		inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	1	22340647	67340647	Rat
1357401	Bw43	Body weight QTL 43	3.75		body mass (VT:0001259)	body weight (CMO:0000012)	1	22340647	49361612	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	22340647	102268831	Rat
631494	Bp95	Blood pressure QTL 95	40	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	16206210	49268520	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	11481312	82174945	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	15431621	49361612	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	32356093	162846471	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	7e-07	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	15431621	49361612	Rat
1300167	Hrtrt2	Heart rate QTL 2	4.35		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	11481312	75088344	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	32737458	199368955	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	11481312	82174945	Rat
1578756	Iddm22	Insulin dependent diabetes mellitus QTL 22	2.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	11835181	56835181	Rat
631508	Sald1	Serum aldosterone level QTL 1	3.7		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	1	9856001	54856001	Rat
1331785	Rf27	Renal function QTL 27	4.643		urine sodium amount (VT:0006274)	urine sodium level (CMO:0000129)	1	28879780	78430678	Rat
1300172	Bp172	Blood pressure QTL 172	3.56		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	32737273	90665040	Rat
724520	Bp145	Blood pressure QTL 145	2.1	0.0024	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	20784828	65784828	Rat
1558642	Prcr2	Prostate cancer resistance QTL 2	4.3		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	1	20763158	44095856	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	11481312	82174945	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
9589820	Insglur3	Insulin/glucose ratio QTL 3	10.75	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	1	34836858	79836858	Rat
738020	Pia8	Pristane induced arthritis QTL 8	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	1	65833076	Rat
1600360	Mcs16	Mammary carcinoma susceptibility QTL 16	2.4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	2244390	43433040	Rat
1354599	Bw29	Body weight QTL 29	3.46	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	33449848	78449848	Rat
1578669	Bss9	Bone structure and strength QTL 9	6.3		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	1	509108	43284926	Rat
2302038	Pia31	Pristane induced arthritis QTL 31	5.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	1	10992065	55992065	Rat
8552948	Pigfal11	Plasma insulin-like growth factor 1 level QTL 11	4.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	34836858	79836858	Rat
634353	Rends2	Renal damage susceptibility QTL 2		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	1	19333571	56983283	Rat

RH137544

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	40,901,646 - 40,901,786 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	40,989,931 - 40,990,070	NCBI	Rnor6.0
Rnor_5.0	1	42,332,130 - 42,332,269	UniSTS	Rnor5.0
Celera	1	36,592,799 - 36,592,938	UniSTS
Cytogenetic Map	1	p11	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001017447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC078920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000026367 ⟹ ENSRNOP00000026367

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	40,894,550 - 40,918,302 (+)	Ensembl
Rnor_6.0 Ensembl	1	40,982,862 - 41,006,371 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092809 ⟹ ENSRNOP00000075976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	40,894,616 - 40,913,637 (+)	Ensembl
Rnor_6.0 Ensembl	1	40,982,900 - 41,001,511 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000092953 ⟹ ENSRNOP00000076009

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	1	40,982,906 - 40,990,149 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093126

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	40,910,788 - 40,916,725 (+)	Ensembl
Rnor_6.0 Ensembl	1	40,998,636 - 41,004,790 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093943 ⟹ ENSRNOP00000086037

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	40,896,960 - 40,918,302 (+)	Ensembl

RefSeq Acc Id:

NM_001017447 ⟹ NP_001017447

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	43,299,949 - 43,323,675 (+)	NCBI
mRatBN7.2	1	40,894,578 - 40,918,302 (+)	NCBI
Rnor_6.0	1	40,982,862 - 41,006,371 (+)	NCBI
Rnor_5.0	1	42,325,061 - 42,348,570 (+)	NCBI
RGSC_v3.4	1	35,143,718 - 35,169,030 (+)	RGD
Celera	1	36,585,729 - 36,608,806 (+)	RGD

Sequence:

show sequence

GGGCTCCGTAGCCGTTACCGTTGAACCCCGAGCAACGCCAGTGAGTGGCGTGTGGCGCCGGCGCGATGGCCGAGTCCCCGGCGTTTCTCTCCGCTCAGGACGTGGGGTCCTTCGCATATCTTACAATT
AAGGACAGAACACCGCAGATCTTAACCAAGGTTATTGATACATTGCATCGACATAAAAGTGAATTTTTTGAAAAACATGGAGAGGAAGGCGTTGAAGCTGAGAAGAAAGCCATCTCTCTTCTTTCTAA
ATTACGGAATGAACTGCAGACAGATAAACCAATTATCCCTTTGGTGGACAAGTGTGTTGACACGGACATATGGAATCAATACCTGGAATATCAGCGGAGCCTTTTAAATGAAGGAGACGGGGAGCCAC
GTTGGTTCTTCTCGCCCTGGTTGTTCGTAGAATGCTACATGTATCGGAGAATTCATGAAGCCATCATGCAGAGTCCACCAATCCATGACTTTGATGTGTTTAAGGAAAGTAAAGACGAGAACTTCTTT
GAGTCGCAGGACTCCATCAATGCTCTGTGTACACACTTGCTGCAGCTGAAACCCATCACAGACCTTGGGGAAAAACAGATCCAGGACGAGTTCTTCAAACTCCTGCAGATTTCTCTCTGGGGGAATAA
GTGCGACCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAAGGCCGATATAATAAATTCTTTGAAAGACCTAAAACCATTCATTTTAGTAAATGAGACAGAATCTCTCTGGGCATTGCTTAGTAAGT
TAAAGAAAACAGCAGAGCCCCCCGCAGTTAGAGTAGACATCGTTCTGGATAATTCTGGGTTTGAACTGGTTACAGATTTAGTATTTGCAGACTTCTTGTTATCCTCTGAATTAGCTACTGAGATTCAT
TTTCATGGGAAAATCATCCCATGGTTTGTGTCTGACGTTACTGTGCGGGACTTTGAGTGGATAGTTGAGCATATGAAGGGTAGTCATCTGGAGTCCATGTCTGCCTGTGGGGCTGCCTGGGAGGCCTA
TGTTGGGATGAAGAAGTGGGTTTACCACGACCATGCCTTTTGGACTCTGCCTCATCCATTCTGTGCAATGCCCCAGGTCGCCCCTGACTTATATGCTGAACTGCAAAAGGCAGGTGTTGTTTTATTTA
AGGGAGATTTGAATTATAGGAAGCTGATGGGTGACAGAAAATGGAAGTTCACCGTTCCATTCCATCAGGCTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATTAGAACATTGAAGTGTGAGCTT
CAGGTTGGGCTGCAGCCTGGGCAGGCCGAGCACCTCACAGCCTCTGACCCCCACTGGCTGACCACAGGCAAGTATGGAATATTTCAGTTTGATGGGCCACTTTGACTCTACTCAGGAATTCCTGGTGG
CAGAGAATGTTCTGTGAATCTCCCTTCAGCCTCAGAAAAACAGAGCATGGATTCAGGCCTGGCTTCTCCTCAGCATGGGCAGCCCCATGTCTCAGCTCCTGTGCTACCTTACAGACTGTAGATGAGGC
TCCTTGGAATGCTTCCCTCCTGCGTTGTTTTGGGTTTTAAGCCAGTTACACTTCTATTGGAATTTTAGTCACTATTCCAAGTAAATGCAAACTTTCAAGTGGTTTTAATGAACTCATCTTTGACTTCA
AAGAATGCAAAAATGTGGGTGACTTTGCTTTAAAAACTAATTTAAATGTTAGCAAATCTTGTTTTCTTAAACTGGTTGTTTAATACGAGGAAGCTTATTGTTACTTAACTTAAGTTTTGGCTCTTGAG
TTAGTGGCCCAGTGAACACATGCCTTGTAAGAGCTCTCCCAGGAGGCGTGTGCATGATGCTTGAACACAATTACCTCAGACCTGAACCACAGCCTGCTCTCTCGCATGCATTAAGTTTTTAAAGCCCA
TTTTCTTACATAGATTTGTATTTTGATTGATCTATGGAAAGGGTCAAAGCACAAACTGAACATCTAAACAGTGACTGACAAAGTATGAGTACAGTTGTGTCCCCATTGTCCTTCCGATTGCCATGGTG
ACCTCACCACCACAGTGGTGTCCAGATGAAGACAGCTTCAGTTTGCAGTAGCAGACTTAGATGGAAATGACTGTTGGGCATTGTTTTAGTTACTGCCAAGCTGAGTTCAATCTTCATATCACACGTTG
TATAGTTCCTCACCTCAGATATAGAGTCTATAAATTCTTGTTACTTTGTTTCAAAACAAATTGGAAATAAAGTTGAAATGCTTTCTGTACTGGAATAATAAAATGAATTTTACAGAGAAAAAAAAAAA
AAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006227833 ⟹ XP_006227895

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	43,315,399 - 43,323,675 (+)	NCBI
mRatBN7.2	1	40,909,989 - 40,918,302 (+)	NCBI
Rnor_6.0	1	40,997,528 - 41,006,371 (+)	NCBI
Rnor_5.0	1	42,325,061 - 42,348,570 (+)	NCBI

Sequence:

show sequence

AGCTAAATCCCCAACCCAATCTCTTAAGAAATTCTTATGTGCATCTGGTTTATAGTACAGAAGA
GGTGATATGAATTGATCTTTTAGTTTATAAGTTCCAAAAATACAAGTTTGCTGTAGAAGAAATCCTTTAGTACCTGTTTCTAAACACGGTAGTGTAGCTCAGGCTCCAGGACGAGCCTGCAACACTGT
GGCTGCTATCACAACTGGGGAAGCAAGACAGAAATGGCCGCGCATAGAGACTGCGGCTAGTGAGCACAGTTGAGAAGACCCTCCCAAGACTGGCTTCAGTGAGACAGCACATTTAATTGGGAGAACAA
AGGACGTGGGTAAGGTCTTCAGGAGAGTGTACATCGTTGGTGGGGGTCAGAGCAATGAGGGTGCCTCAAGCAGAGAGAGGAGTTTCAGATATTGCTGGACATGACCTCACAATGAGAGGAGGCTCACC
CTGGCTACTAGGCTATGTGACCTCCTCTGAGGAGCAAGGGCTGGGGCACAGGGCTAAGTGTGAGCTGGGATGTGCAGGCCTGGGCCAGGCTGGCTTCAAAACCACGGTCCTCTTGTGTCAGCCTGCTA
AGTGCTCAGGTCACAGTCCACCAATCCATGACTTTGATGTGTTTAAGGAAAGTAAAGACGAGAACTTCTTTGAGTCGCAGGACTCCATCAATGCTCTGTGTACACACTTGCTGCAGCTGAAACCCATC
ACAGACCTTGGGGAAAAACAGATCCAGGACGAGTTCTTCAAACTCCTGCAGATTTCTCTCTGGGGGAATAAGTGCGACCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAAGGCCGATATAATAAA
TTCTTTGAAAGACCTAAAACCATTCATTTTAGTAAATGAGACAGAATCTCTCTGGGCATTGCTTAGTAAGTTAAAGAAAACAGCAGAGCCCCCCGCAGTTAGAGTAGACATCGTTCTGGATAATTCTG
GGTTTGAACTGGTTACAGATTTAGTATTTGCAGACTTCTTGTTATCCTCTGAATTAGCTACTGAGATTCATTTTCATGGGAAAATCATCCCATGGTTTGTGTCTGACGTTACTGTGCGGGACTTTGAG
TGGATAGTTGAGCATATGAAGGGTAGTCATCTGGAGTCCATGTCTGCCTGTGGGGCTGCCTGGGAGGCCTATGTTGGGATGAAGAAGTGGGTTTACCACGACCATGCCTTTTGGACTCTGCCTCATCC
ATTCTGTGCAATGCCCCAGGTCGCCCCTGACTTATATGCTGAACTGCAAAAGGCAGGTGTTGTTTTATTTAAGGGAGATTTGAATTATAGGAAGCTGATGGGTGACAGAAAATGGAAGTTCACCGTTC
CATTCCATCAGGCTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATTAGAACATTGAAGTGTGAGCTTCAGGTTGGGCTGCAGCCTGGGCAGGCCGAGCACCTCACAGCCTCTGACCCCCACTGG
CTGACCACAGGCAAGTATGGAATATTTCAGTTTGATGGGCCACTTTGACTCTACTCAGGAATTCCTGGTGGCAGAGAATGTTCTGTGAATCTCCCTTCAGCCTCAGAAAAACAGAGCATGGATTCAGG
CCTGGCTTCTCCTCAGCATGGGCAGCCCCATGTCTCAGCTCCTGTGCTACCTTACAGACTGTAGATGAGGCTCCTTGGAATGCTTCCCTCCTGCGTTGTTTTGGGTTTTAAGCCAGTTACACTTCTAT
TGGAATTTTAGTCACTATTCCAAGTAAATGCAAACTTTCAAGTGGTTTTAATGAACTCATCTTTGACTTCAAAGAATGCAAAAATGTGGGTGACTTTGCTTTAAAAACTAATTTAAATGTTAGCAAAT
CTTGTTTTCTTAAACTGGTTGTTTAATACGAGGAAGCTTATTGTTACTTAACTTAAGTTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTAAGAGCTCTCCCAGGAGGCGTGTGCATGA
TGCTTGAACACAATTACCTCAGACCTGAACCACAGCCTGCTCTCTCGCATGCATTAAGTTTTTAAAGCCCATTTTCTTACATAGATTTGTATTTTGATTGATCTATGGAAAGGGTCAAAGCACAAACT
GAACATCTAAACAGTGACTGACAAAGTATGAGTACAGTTGTGTCCCCATTGTCCTTCCGATTGCCATGGTGACCTCACCACCACAGTGGTGTCCAGATGAAGACAGCTTCAGTTTGCAGTAGCAGACT
TAGATGGAAATGACTGTTGGGCATTGTTTTAGTTACTGCCAAGCTGAGTTCAATCTTCATATCACACGTTGTATAGTTCCTCACCTCAGATATAGAGTCTATAAATTCTTGTTACTTTGTTTCAAAAC
AAATTGGAAATAAAGTTGAAATGCTTTCTGTACTGGAATAATAAAATGAATTTTACAGAGAAA

hide sequence

RefSeq Acc Id:

XM_017588870 ⟹ XP_017444359

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	43,299,929 - 43,323,675 (+)	NCBI
mRatBN7.2	1	40,894,558 - 40,918,302 (+)	NCBI
Rnor_6.0	1	40,982,761 - 41,006,371 (+)	NCBI

Sequence:

show sequence

CCATGCTCTGTCCCTGGCCAGGGCACCAAATAAAGTTTCTGAGTTCAAAAGCGCTTTTTACTTT
AAAAAAAAAAAAAAAAAAACTCCAACGCTTTCTTTCTGGGCTCCGTAGCCGTTACCGTTGAACCCCGAGCAACGCCAGTGAGTGGCGTGTGGCGCCGGCGCGATGGCCGAGTCCCCGGCGTTTCTCTC
CGCTCAGGACGTGGGGAAGGCGTTGAAGCTGAGAAGAAAGCCATCTCTCTTCTTTCTAAATTACGGAATGAACTGCAGACAGATAAACCAATTATCCCTTTGGTGGACAAGTGTGTTGACACGGACAT
ATGGAATCAATACCTGGAATATCAGCGGAGCCTTTTAAATGAAGGAGACGGGGAGCCACGTTGGTTCTTCTCGCCCTGGTTGTTCGTAGAATGCTACATGTATCGGAGAATTCATGAAGCCATCATGC
AGAGTCCACCAATCCATGACTTTGATGTGTTTAAGGAAAGTAAAGACGAGAACTTCTTTGAGTCGCAGGACTCCATCAATGCTCTGTGTACACACTTGCTGCAGCTGAAACCCATCACAGACCTTGGG
GAAAAACAGATCCAGGACGAGTTCTTCAAACTCCTGCAGATTTCTCTCTGGGGGAATAAGTGCGACCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAAGGCCGATATAATAAATTCTTTGAAAGA
CCTAAAACCATTCATTTTAGTAAATGAGACAGAATCTCTCTGGGCATTGCTTAGTAAGTTAAAGAAAACAGCAGAGCCCCCCGCAGTTAGAGTAGACATCGTTCTGGATAATTCTGGGTTTGAACTGG
TTACAGATTTAGTATTTGCAGACTTCTTGTTATCCTCTGAATTAGCTACTGAGATTCATTTTCATGGGAAAATCATCCCATGGTTTGTGTCTGACGTTACTGTGCGGGACTTTGAGTGGATAGTTGAG
CATATGAAGGGTAGTCATCTGGAGTCCATGTCTGCCTGTGGGGCTGCCTGGGAGGCCTATGTTGGGATGAAGAAGTGGGTTTACCACGACCATGCCTTTTGGACTCTGCCTCATCCATTCTGTGCAAT
GCCCCAGGTCGCCCCTGACTTATATGCTGAACTGCAAAAGGCAGGTGTTGTTTTATTTAAGGGAGATTTGAATTATAGGAAGCTGATGGGTGACAGAAAATGGAAGTTCACCGTTCCATTCCATCAGG
CTCTGAGTGGCTTCCACCCTGCACCTCTCTGTAGCATTAGAACATTGAAGTGTGAGCTTCAGGTTGGGCTGCAGCCTGGGCAGGCCGAGCACCTCACAGCCTCTGACCCCCACTGGCTGACCACAGGC
AAGTATGGAATATTTCAGTTTGATGGGCCACTTTGACTCTACTCAGGAATTCCTGGTGGCAGAGAATGTTCTGTGAATCTCCCTTCAGCCTCAGAAAAACAGAGCATGGATTCAGGCCTGGCTTCTCC
TCAGCATGGGCAGCCCCATGTCTCAGCTCCTGTGCTACCTTACAGACTGTAGATGAGGCTCCTTGGAATGCTTCCCTCCTGCGTTGTTTTGGGTTTTAAGCCAGTTACACTTCTATTGGAATTTTAGT
CACTATTCCAAGTAAATGCAAACTTTCAAGTGGTTTTAATGAACTCATCTTTGACTTCAAAGAATGCAAAAATGTGGGTGACTTTGCTTTAAAAACTAATTTAAATGTTAGCAAATCTTGTTTTCTTA
AACTGGTTGTTTAATACGAGGAAGCTTATTGTTACTTAACTTAAGTTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGTAAGAGCTCTCCCAGGAGGCGTGTGCATGATGCTTGAACACA
ATTACCTCAGACCTGAACCACAGCCTGCTCTCTCGCATGCATTAAGTTTTTAAAGCCCATTTTCTTACATAGATTTGTATTTTGATTGATCTATGGAAAGGGTCAAAGCACAAACTGAACATCTAAAC
AGTGACTGACAAAGTATGAGTACAGTTGTGTCCCCATTGTCCTTCCGATTGCCATGGTGACCTCACCACCACAGTGGTGTCCAGATGAAGACAGCTTCAGTTTGCAGTAGCAGACTTAGATGGAAATG
ACTGTTGGGCATTGTTTTAGTTACTGCCAAGCTGAGTTCAATCTTCATATCACACGTTGTATAGTTCCTCACCTCAGATATAGAGTCTATAAATTCTTGTTACTTTGTTTCAAAACAAATTGGAAATA
AAGTTGAAATGCTTTCTGTACTGGAATAATAAAATGAATTTTACAGAGAAA

hide sequence

RefSeq Acc Id:

XR_010064171

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	43,299,916 - 43,319,037 (+)	NCBI


Protein RefSeqs	NP_001017447	(Get FASTA)	NCBI Sequence Viewer
	XP_006227895	(Get FASTA)	NCBI Sequence Viewer
	XP_017444359	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH78920	(Get FASTA)	NCBI Sequence Viewer
	EDL92861	(Get FASTA)	NCBI Sequence Viewer
	EDL92862	(Get FASTA)	NCBI Sequence Viewer
	EDL92863	(Get FASTA)	NCBI Sequence Viewer
	EDL92864	(Get FASTA)	NCBI Sequence Viewer
	EDL92865	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000026367
	ENSRNOP00000026367.4
GenBank Protein	Q6AYT5	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001017447 ⟸ NM_001017447

- UniProtKB:

Q6AYT5 (UniProtKB/Swiss-Prot), A6KIL4 (UniProtKB/TrEMBL), A0A8I6A1F9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAESPAFLSAQDVGSFAYLTIKDRTPQILTKVIDTLHRHKSEFFEKHGEEGVEAEKKAISLLSKLRNELQTDKPIIPLVDKCVDTDIWNQYLEYQRSLLNEGDGEPRWFFSPWLFVECYMYRRIHEAI
MQSPPIHDFDVFKESKDENFFESQDSINALCTHLLQLKPITDLGEKQIQDEFFKLLQISLWGNKCDLSLSGGESSSQKADIINSLKDLKPFILVNETESLWALLSKLKKTAEPPAVRVDIVLDNSGFE
LVTDLVFADFLLSSELATEIHFHGKIIPWFVSDVTVRDFEWIVEHMKGSHLESMSACGAAWEAYVGMKKWVYHDHAFWTLPHPFCAMPQVAPDLYAELQKAGVVLFKGDLNYRKLMGDRKWKFTVPFH
QALSGFHPAPLCSIRTLKCELQVGLQPGQAEHLTASDPHWLTTGKYGIFQFDGPL

hide sequence

RefSeq Acc Id:	XP_006227895 ⟸ XM_006227833
- Peptide Label:	isoform X1
- UniProtKB:	A6KIL7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRVPQAERGVSDIAGHDLTMRGGSPWLLGYVTSSEEQGLGHRAKCELGCAGLGQAGFKTTVLLC QPAKCSGHSPPIHDFDVFKESKDENFFESQDSINALCTHLLQLKPITDLGEKQIQDEFFKLLQISLWGNKCDLSLSGGESSSQKADIINSLKDLKPFILVNETESLWALLSKLKKTAEPPAVRVDIVL DNSGFELVTDLVFADFLLSSELATEIHFHGKIIPWFVSDVTVRDFEWIVEHMKGSHLESMSACGAAWEAYVGMKKWVYHDHAFWTLPHPFCAMPQVAPDLYAELQKAGVVLFKGDLNYRKLMGDRKWK FTVPFHQALSGFHPAPLCSIRTLKCELQVGLQPGQAEHLTASDPHWLTTGKYGIFQFDGPL hide sequence

RefSeq Acc Id:	XP_017444359 ⟸ XM_017588870
- Peptide Label:	isoform X2
- UniProtKB:	A6KIL7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYRRIHEAIMQSPPIHDFDVFKESKDENFFESQDSINALCTHLLQLKPITDLGEKQIQDEFFKL LQISLWGNKCDLSLSGGESSSQKADIINSLKDLKPFILVNETESLWALLSKLKKTAEPPAVRVDIVLDNSGFELVTDLVFADFLLSSELATEIHFHGKIIPWFVSDVTVRDFEWIVEHMKGSHLESMS ACGAAWEAYVGMKKWVYHDHAFWTLPHPFCAMPQVAPDLYAELQKAGVVLFKGDLNYRKLMGDRKWKFTVPFHQALSGFHPAPLCSIRTLKCELQVGLQPGQAEHLTASDPHWLTTGKYGIFQFDGPL hide sequence

Ensembl Acc Id:

ENSRNOP00000075976 ⟸ ENSRNOT00000092809

Ensembl Acc Id:

ENSRNOP00000076009 ⟸ ENSRNOT00000092953

Protein Domains

Damage-control phosphatase ARMT1-like metal-binding

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6AYT5-F1-model_v2	AlphaFold	Q6AYT5	1-439	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13689587

Promoter ID:

EPDNEW_R112

Type:

initiation region

Name:

Armt1_1

Description:

acidic residue methyltransferase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	40,982,884 - 40,982,944	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-61716	BioCyc
Ensembl Genes	ENSRNOG00000019489	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000026367	ENTREZGENE
	ENSRNOT00000026367.7	UniProtKB/Swiss-Prot
Gene3D-CATH	1.20.930.60	UniProtKB/Swiss-Prot
	Uncharacterised protein PF01937, DUF89, domain 3	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7096641	IMAGE-MGC_LOAD
InterPro	AF1104-like_sf	UniProtKB/Swiss-Prot
	ARMT1	UniProtKB/Swiss-Prot
	DUF89	UniProtKB/Swiss-Prot
KEGG Report	rno:292267	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93699	IMAGE-MGC_LOAD
NCBI Gene	292267	ENTREZGENE
PANTHER	DAMAGE-CONTROL PHOSPHATASE ARMT1	UniProtKB/Swiss-Prot
	PTHR12260	UniProtKB/Swiss-Prot
Pfam	DUF89	UniProtKB/Swiss-Prot
PhenoGen	Armt1	PhenoGen
RatGTEx	ENSRNOG00000019489	RatGTEx
Superfamily-SCOP	SSF111321	UniProtKB/Swiss-Prot
UniProt	A0A1B0GWP8_RAT	UniProtKB/TrEMBL
	A0A8I5ZWM4_RAT	UniProtKB/TrEMBL
	A0A8I6A1F9	ENTREZGENE, UniProtKB/TrEMBL
	A6KIL4	ENTREZGENE, UniProtKB/TrEMBL
	A6KIL7	ENTREZGENE, UniProtKB/TrEMBL
	ARMT1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-03-16	Armt1	acidic residue methyltransferase 1	RGD1305235	similar to RIKEN cDNA 1700052N19	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1305235	similar to RIKEN cDNA 1700052N19	RGD1305235_predicted	similar to RIKEN cDNA 1700052N19 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1305235_predicted	similar to RIKEN cDNA 1700052N19 (predicted)	LOC292267_predicted	similar to RIKEN cDNA 1700052N19 (predicted)	Symbol and Name status set to approved	1331353	APPROVED
2005-01-20	RGD1305235_predicted	similar to RIKEN cDNA 1700052N19 (predicted)	LOC292267_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC292267_predicted	similar to RIKEN cDNA 1700052N19 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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