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Gene: Clvs2 (clavesin 2) Rattus norvegicus
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Symbol: Clvs2
Name: clavesin 2
Description: Predicted to have phosphatidylinositol-3,5-bisphosphate binding activity. Involved in lysosome organization. Localizes to clathrin-coated vesicle and trans-Golgi network. Orthologous to human CLVS2 (clavesin 2); INTERACTS WITH 17alpha-ethynylestradiol; bisphenol A; methamphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: clavesin-2; LOC361459; retinaldehyde binding protein 1-like 2; retinaldehyde-binding protein 1-like 2; Retinaldehyde-binding protein 1-like protein 2; RGD1306801; Rlbp1l2; similar to hypothetical protein MGC34646
Orthologs:
Homo sapiens (human) : CLVS2 (clavesin 2)  HGNC  Alliance
Mus musculus (house mouse) : Clvs2 (clavesin 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clvs2 (clavesin 2)
Pan paniscus (bonobo/pygmy chimpanzee) : CLVS2 (clavesin 2)
Canis lupus familiaris (dog) : CLVS2 (clavesin 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clvs2 (clavesin 2)
Sus scrofa (pig) : CLVS2 (clavesin 2)
Chlorocebus sabaeus (African green monkey) : CLVS2 (clavesin 2)
Heterocephalus glaber (naked mole-rat) : Clvs2 (clavesin 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0125,173,089 - 25,217,625 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl125,173,242 - 25,296,927 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0126,631,832 - 26,677,841 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4124,279,841 - 24,309,821 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1124,282,808 - 24,393,034 (+)NCBI
Celera122,443,160 - 22,472,626 (+)NCBICelera
Cytogenetic Map1p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Clvs2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306801
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.