Abracl (ABRA C-terminal like) - Rat Genome Database

Name: Abracl
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Abracl (ABRA C-terminal like) Rattus norvegicus

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Symbol:

Abracl

Name:

ABRA C-terminal like

Description:

Predicted to be involved in regulation of actin filament-based process. Orthologous to human ABRACL (ABRA C-terminal like); INTERACTS WITH acrylamide; bisphenol A; 17beta-estradiol (ortholog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

costars family protein ABRACL; hypothetical protein LOC685045; LOC685045; similar to Protein C6orf115; uncharacterized protein LOC685045

Orthologs:

Homo sapiens (human) : ABRACL (ABRA C-terminal like) HGNC Alliance
Mus musculus (house mouse) : Abracl (ABRA C-terminal like) MGI Alliance
Chinchilla lanigera (long-tailed chinchilla) : Abracl (ABRA C-terminal like)
Pan paniscus (bonobo/pygmy chimpanzee) : ABRACL (ABRA C-terminal like)
Canis lupus familiaris (dog) : ABRACL (ABRA C-terminal like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Abracl (ABRA C-terminal like)
Sus scrofa (pig) : ABRACL (ABRA C-terminal like)

more info ...

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ABRACL (ABRA C-terminal like)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Abracl (ABRA C-terminal like)	HGNC	NCBI, HomoloGene, Inparanoid, Panther, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Abracl (ABRA C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ABRACL (ABRA C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ABRACL (ABRA C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Abracl (ABRA C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ABRACL (ABRA C-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ABRACL (ABRA C-terminal like)	Alliance	DIOPT (Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB)
Mus musculus (house mouse):	Abracl (ABRA C-terminal like)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB)
Danio rerio (zebrafish):	abracl (ABRA C-terminal like)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB)

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	1	13,165,583 - 13,175,773 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	1	14,859,230 - 14,869,420 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	13,063,558 - 13,073,748 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	1	11,112,403 - 11,122,593 (-)	NCBI		Celera
Cytogenetic Map	1	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation (Toggle Annotation Detail/Summary View)

Gene-Chemical Interaction Annotations

Gene Ontology Annotations

References - curated

References - uncurated

Genomics

Comparative Map Data

Position Markers

QTLs in Region (Rnor_6.0)

miRNA Target Status

Sequence

Nucleotide Sequences

Protein Sequences

Transcriptome

Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links

Nomenclature History

More on Abracl
	Alliance Gene
	NCBI Gene
	Ensembl Gene
	JBrowse: rn5 rn6
	NCBI Genome Data Viewer

RGD Object Information
RGD ID:	1583256
Created:	2006-11-19
Species:	Rattus norvegicus
Last Modified:	2019-04-12
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.

Functional Annotation unavailable	Annotation Distribution unavailable	Genomic Variants unavailble for Mouse Genomic Variants unavailable
Functional Annotation	Annotation Distribution	Genomic Variants

Protein-Protein Interactions unavailable	Genome Viewer unavailable	Damaging Variants unavailble for Mouse Damaging Variants unavailable
Protein-Protein Interactions	Genome Viewer	Damaging Variants

Annotation Comparison unavailable	OLGA unavailable
Annotation Comparison	OLGA	Excel (Download)

Gene Enrichment unavailable
Gene Enrichment