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Gene: Hddc2 (HD domain containing 2) Rattus norvegicus
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Symbol: Hddc2
Name: HD domain containing 2
Description: Predicted to have 5'-deoxynucleotidase activity. Predicted to be involved in dephosphorylation. Orthologous to human HDDC2 (HD domain containing 2); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,6-dinitrotoluene; cyclosporin A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: HD domain-containing protein 2; LOC361462; RGD1307562; similar to CGI-130 protein
Orthologs:
Homo sapiens (human) : HDDC2 (HD domain containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Hddc2 (HD domain containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hddc2 (HD domain containing 2)
Pan paniscus (bonobo/pygmy chimpanzee) : HDDC2 (HD domain containing 2)
Canis lupus familiaris (dog) : HDDC2 (HD domain containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hddc2 (HD domain containing 2)
Sus scrofa (pig) : HDDC2 (HD domain containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0128,567,447 - 28,600,116 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0130,022,220 - 30,054,922 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4126,955,259 - 26,975,139 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1126,958,509 - 26,978,046 (-)NCBI
Celera124,988,009 - 25,007,891 (-)NCBICelera
Cytogenetic Map1p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Hddc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307562
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.