Rmnd1 (required for meiotic nuclear division 1 homolog) - Rat Genome Database

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Gene: Rmnd1 (required for meiotic nuclear division 1 homolog) Rattus norvegicus
Analyze
Symbol: Rmnd1
Name: required for meiotic nuclear division 1 homolog
RGD ID: 1309546
Description: Predicted to be involved in positive regulation of mitochondrial translation. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 11. Orthologous to human RMND1 (required for meiotic nuclear division 1 homolog); INTERACTS WITH bisphenol A; dibutyl phthalate; finasteride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Iag-1; implantation-associated gene-1; LOC292268; required for meiotic nuclear division 1 homolog (S. cerevisiae); required for meiotic nuclear division protein 1 homolog; RGD1309546; similar to hypothetical protein FLJ20627
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2140,859,829 - 40,894,390 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl140,859,829 - 40,894,314 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx141,387,690 - 41,411,278 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0147,374,892 - 47,398,474 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0141,463,223 - 41,486,772 (-)NCBIRnor_WKY
Rnor_6.0140,948,843 - 40,982,669 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl140,948,847 - 40,972,826 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,291,016 - 42,324,868 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4135,114,371 - 35,132,050 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1135,099,374 - 35,146,560 (-)NCBI
Celera136,551,290 - 36,574,838 (-)NCBICelera
Cytogenetic Map1q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
mitochondrion  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18296448   PMID:18614015   PMID:25604853  


Genomics

Comparative Map Data
Rmnd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2140,859,829 - 40,894,390 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl140,859,829 - 40,894,314 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx141,387,690 - 41,411,278 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0147,374,892 - 47,398,474 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0141,463,223 - 41,486,772 (-)NCBIRnor_WKY
Rnor_6.0140,948,843 - 40,982,669 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl140,948,847 - 40,972,826 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,291,016 - 42,324,868 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4135,114,371 - 35,132,050 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1135,099,374 - 35,146,560 (-)NCBI
Celera136,551,290 - 36,574,838 (-)NCBICelera
Cytogenetic Map1q11NCBI
RMND1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386151,404,762 - 151,452,126 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl6151,398,898 - 151,452,158 (-)EnsemblGRCh38hg38GRCh38
GRCh376151,725,897 - 151,773,261 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366151,767,682 - 151,815,009 (-)NCBINCBI36Build 36hg18NCBI36
Build 346151,818,103 - 151,865,373NCBI
Celera6152,459,873 - 152,507,180 (-)NCBICelera
Cytogenetic Map6q25.1NCBI
HuRef6149,288,185 - 149,335,348 (-)NCBIHuRef
CHM1_16151,990,047 - 152,037,461 (-)NCBICHM1_1
T2T-CHM13v2.06152,605,351 - 152,652,768 (-)NCBIT2T-CHM13v2.0
Rmnd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39104,353,168 - 4,382,583 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl104,351,915 - 4,382,388 (-)EnsemblGRCm39 Ensembl
GRCm38104,403,169 - 4,432,405 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl104,401,915 - 4,432,388 (-)EnsemblGRCm38mm10GRCm38
MGSCv37105,914,189 - 5,943,372 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36105,914,207 - 5,943,370 (+)NCBIMGSCv36mm8
Celera104,332,558 - 4,361,685 (-)NCBICelera
Cytogenetic Map10A1NCBI
Rmnd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495543910,151,357 - 10,193,765 (+)NCBIChiLan1.0ChiLan1.0
RMND1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16153,919,641 - 153,965,134 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6153,919,641 - 153,965,134 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v06149,222,867 - 149,268,725 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
RMND1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1141,755,099 - 41,799,589 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl141,755,191 - 41,799,847 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha142,596,280 - 42,640,774 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0141,940,009 - 41,984,506 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl141,940,010 - 41,984,848 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1141,813,483 - 41,857,953 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0141,657,422 - 41,701,881 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0142,163,925 - 42,208,412 (-)NCBIUU_Cfam_GSD_1.0
Rmnd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946137,047,815 - 137,092,010 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364894,298,328 - 4,343,969 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049364894,299,810 - 4,343,996 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RMND1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl114,795,674 - 14,855,069 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1114,795,632 - 14,852,026 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2117,218,981 - 17,262,700 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RMND1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11378,865,327 - 78,912,235 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1378,865,765 - 78,912,601 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604051,196,671 - 51,243,302 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rmnd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247856,822,268 - 6,857,035 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247856,814,901 - 6,856,643 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rmnd1
46 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:290
Count of miRNA genes:188
Interacting mature miRNAs:207
Transcripts:ENSRNOT00000060757
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738020Pia8Pristane induced arthritis QTL 84.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1165833076Rat
1578650Bmd6Bone mineral density QTL 612.2femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)150910843284926Rat
1578651Bmd7Bone mineral density QTL 714.2femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)150910843284926Rat
1578669Bss9Bone structure and strength QTL 96.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)150910843284926Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
1600360Mcs16Mammary carcinoma susceptibility QTL 162.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1224439043433040Rat
7421626Bp360Blood pressure QTL 3600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1439328949393289Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
631508Sald1Serum aldosterone level QTL 13.7blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)1985600154856001Rat
2302038Pia31Pristane induced arthritis QTL 315.50.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)11099206555992065Rat
1300167Hrtrt2Heart rate QTL 24.35heart pumping trait (VT:2000009)heart rate (CMO:0000002)11148131275088344Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)11148131282174945Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)11148131282174945Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)11148131282174945Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)11148131282174945Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
1578756Iddm22Insulin dependent diabetes mellitus QTL 222.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)11183518156835181Rat
5684998Bss101Bone structure and strength QTL 1013.6tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)11543162149361612Rat
5684999Bss102Bone structure and strength QTL 1025.50.00000072tibia strength trait (VT:1000284)tibia stiffness (CMO:0001735)11543162149361612Rat
631494Bp95Blood pressure QTL 95400.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)11620621049268520Rat
634353Rends2Renal damage susceptibility QTL 20.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)11933357156983283Rat
1558642Prcr2Prostate cancer resistance QTL 24.3prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)12076315844095856Rat
724520Bp145Blood pressure QTL 1452.10.0024arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12078482865784828Rat
1357397Bw41Body weight QTL 414.190.0001body mass (VT:0001259)body weight (CMO:0000012)12234064749361612Rat
1357401Bw43Body weight QTL 433.75body mass (VT:0001259)body weight (CMO:0000012)12234064749361612Rat
1357400Bw62Body weight QTL624.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)12234064767340647Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)12887978078430678Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)13344984878449848Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)13344984878449848Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)13483685879836858Rat
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)13523959878430678Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)13523959878430678Rat

Markers in Region
RH141670  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2140,860,009 - 40,860,214 (+)MAPPERmRatBN7.2
Rnor_6.0140,949,024 - 40,949,228NCBIRnor6.0
Rnor_5.0142,291,197 - 42,291,401UniSTSRnor5.0
Celera136,550,836 - 36,551,040UniSTS
Cytogenetic Map1p11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 10 74 35 41 11 8
Low 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001040128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006227834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006227837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017588871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005500480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005500484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ451016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000060757   ⟹   ENSRNOP00000057484
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl140,859,829 - 40,894,314 (-)Ensembl
Rnor_6.0 Ensembl140,948,847 - 40,972,826 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000100151   ⟹   ENSRNOP00000093918
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl140,859,829 - 40,894,314 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000117356   ⟹   ENSRNOP00000081149
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl140,860,118 - 40,894,314 (-)Ensembl
RefSeq Acc Id: NM_001040128   ⟹   NP_001035217
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,860,464 - 40,884,019 (-)NCBI
Rnor_6.0140,949,478 - 40,972,816 (-)NCBI
Rnor_5.0142,291,016 - 42,324,868 (-)NCBI
RGSC_v3.4135,114,371 - 35,132,050 (-)RGD
Celera136,551,290 - 36,574,838 (-)RGD
Sequence:
RefSeq Acc Id: XM_006227834   ⟹   XP_006227896
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,859,829 - 40,894,390 (-)NCBI
Rnor_6.0140,948,843 - 40,982,669 (-)NCBI
Rnor_5.0142,291,016 - 42,324,868 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017588871   ⟹   XP_017444360
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,859,829 - 40,894,190 (-)NCBI
Rnor_6.0140,948,843 - 40,982,500 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039103392   ⟹   XP_038959320
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,859,829 - 40,894,329 (-)NCBI
RefSeq Acc Id: XM_039103400   ⟹   XP_038959328
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,859,829 - 40,892,520 (-)NCBI
RefSeq Acc Id: XM_039103410   ⟹   XP_038959338
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,859,829 - 40,884,530 (-)NCBI
RefSeq Acc Id: XM_039103420   ⟹   XP_038959348
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,866,338 - 40,894,376 (-)NCBI
RefSeq Acc Id: XM_039103423   ⟹   XP_038959351
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,875,918 - 40,894,376 (-)NCBI
RefSeq Acc Id: XM_039103426   ⟹   XP_038959354
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,875,918 - 40,894,376 (-)NCBI
RefSeq Acc Id: XM_039103431   ⟹   XP_038959359
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,875,918 - 40,894,376 (-)NCBI
RefSeq Acc Id: XM_039103441   ⟹   XP_038959369
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,859,829 - 40,880,874 (-)NCBI
RefSeq Acc Id: XR_005500480
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,861,066 - 40,894,376 (-)NCBI
RefSeq Acc Id: XR_005500484
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2140,866,338 - 40,894,376 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001035217   ⟸   NM_001040128
- UniProtKB: E9PU34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006227896   ⟸   XM_006227834
- Peptide Label: isoform X1
- UniProtKB: E9PU34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017444360   ⟸   XM_017588871
- Peptide Label: isoform X1
- UniProtKB: E9PU34 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000057484   ⟸   ENSRNOT00000060757
RefSeq Acc Id: XP_038959320   ⟸   XM_039103392
- Peptide Label: isoform X1
- UniProtKB: E9PU34 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959328   ⟸   XM_039103400
- Peptide Label: isoform X1
- UniProtKB: E9PU34 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959338   ⟸   XM_039103410
- Peptide Label: isoform X1
- UniProtKB: E9PU34 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959369   ⟸   XM_039103441
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038959348   ⟸   XM_039103420
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038959354   ⟸   XM_039103426
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038959359   ⟸   XM_039103431
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038959351   ⟸   XM_039103423
- Peptide Label: isoform X3
RefSeq Acc Id: ENSRNOP00000081149   ⟸   ENSRNOT00000117356
RefSeq Acc Id: ENSRNOP00000093918   ⟸   ENSRNOT00000100151
Protein Domains
DUF155

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9PU34-F1-model_v2 AlphaFold E9PU34 1-450 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309546 AgrOrtholog
BioCyc Gene G2FUF-61717 BioCyc
Ensembl Genes ENSRNOG00000019501 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000057484 ENTREZGENE
  ENSRNOP00000057484.3 UniProtKB/TrEMBL
  ENSRNOP00000081149.1 UniProtKB/TrEMBL
  ENSRNOP00000093918.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000060757 ENTREZGENE
  ENSRNOT00000060757.5 UniProtKB/TrEMBL
  ENSRNOT00000100151.1 UniProtKB/TrEMBL
  ENSRNOT00000117356.1 UniProtKB/TrEMBL
InterPro DUF155 UniProtKB/TrEMBL
KEGG Report rno:292268 UniProtKB/TrEMBL
NCBI Gene 292268 ENTREZGENE
Pfam DUF155 UniProtKB/TrEMBL
PhenoGen Rmnd1 PhenoGen
UniProt A0A8I5ZRD2_RAT UniProtKB/TrEMBL
  A0A8I6ALC7_RAT UniProtKB/TrEMBL
  E9PU34 ENTREZGENE, UniProtKB/TrEMBL
  Q1W176_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-30 Rmnd1  required for meiotic nuclear division 1 homolog  Rmnd1  required for meiotic nuclear division 1 homolog (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-26 Rmnd1  required for meiotic nuclear division 1 homolog (S. cerevisiae)  RGD1309546_predicted  similar to hypothetical protein FLJ20627 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1309546_predicted  similar to hypothetical protein FLJ20627 (predicted)  LOC292268_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC292268_predicted  similar to hypothetical protein FLJ20627 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL