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Gene: Rag1 (recombination activating 1) Rattus norvegicus
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Symbol: Rag1
Name: recombination activating 1
Description: Predicted to contribute to double-stranded DNA endodeoxyribonuclease activity. Involved in regulation of behavioral fear response and visual learning. Predicted to localize to the DNA recombinase complex; endodeoxyribonuclease complex; and nucleus. Used to study hypertension and severe combined immunodeficiency. Human ortholog(s) of this gene implicated in Omenn syndrome; severe combined immunodeficiency; and severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, Nk cell-positive. Orthologous to human RAG1 (recombination activating 1); PARTICIPATES IN primary immunodeficiency pathway; INTERACTS WITH (RS)-amphetamine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC295954; recombination activating gene 1; recombination activation protein 1; V(D)J recombination-activating protein 1
Orthologs:
Homo sapiens (human) : RAG1 (recombination activating 1)  HGNC  Alliance
Mus musculus (house mouse) : Rag1 (recombination activating 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rag1 (recombination activating 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RAG1 (recombination activating 1)
Canis lupus familiaris (dog) : RAG1 (recombination activating 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rag1 (recombination activating 1)
Sus scrofa (pig) : RAG1 (recombination activating 1)
more info ...
Allele / Splice: Rag1em1Mcwi   Rag1em2Mcwi   Rag1em1Ztm   Rag1em1Ang   Rag1em1Sage  
Genetic Models: LEW-Rag1em1Ztm SD-Rag1em1Ang SD-Rag1em1Sage F344-Rag1em1Sage SS-Rag1em1Mcwi SS-Rag1em2Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0391,206,394 - 91,217,491 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0397,866,048 - 97,877,145 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4386,780,782 - 86,791,878 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1386,683,155 - 86,683,666 (-)NCBI
Celera387,023,254 - 87,034,352 (-)NCBICelera
Cytogenetic Map3q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
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More on Rag1
Alliance Gene
NCBI Gene
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JBrowse: rn5 rn6
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RGD Object Information
RGD ID: 619790
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.