Symbol:
Mertk
Name:
MER proto-oncogene, tyrosine kinase
RGD ID:
69283
Description:
Predicted to enable transmembrane receptor protein tyrosine kinase activity. Involved in phagocytosis; positive regulation of phagocytosis; and protein phosphorylation. Located in photoreceptor outer segment. Used to study retinal degeneration. Human ortholog(s) of this gene implicated in retinitis pigmentosa 38. Orthologous to human MERTK (MER proto-oncogene, tyrosine kinase); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; alpha-Zearalanol.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
c-mer proto-oncogene tyrosine kinase; proto-oncogene c-Mer; proto-oncogene tyrosine-protein kinase Mer; Rdy; receptor tyrosine kinase MerTK; Receptor tyrosine tinase gene probably the gene for Rdy; retinal dystrophy; tyrosine-protein kinase Mer
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
MERTK (MER proto-oncogene, tyrosine kinase)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Mertk (MER proto-oncogene tyrosine kinase)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Mertk (MER proto-oncogene, tyrosine kinase)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
MERTK (MER proto-oncogene, tyrosine kinase)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
MERTK (MER proto-oncogene, tyrosine kinase)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Mertk (MER proto-oncogene, tyrosine kinase)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
MERTK (MER proto-oncogene, tyrosine kinase)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
MERTK (MER proto-oncogene, tyrosine kinase)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Mertk (MER proto-oncogene, tyrosine kinase)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
MBD2 (methyl-CpG binding domain protein 2)
HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
MERTK (MER proto-oncogene, tyrosine kinase)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Mertk (MER proto-oncogene tyrosine kinase)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
mertka (c-mer proto-oncogene tyrosine kinase a)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
mertk
Alliance
DIOPT (Ensembl Compara|OMA|OrthoFinder|PANTHER|PhylomeDB)
Allele / Splice:
Mertkrdy
Is Marker For:
Strains:
(LE x RCS-p + /LavRrrc)F1
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 136,391,936 - 136,498,366 (+) NCBI GRCr8 mRatBN7.2 3 115,939,351 - 116,045,141 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 115,939,351 - 116,046,554 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 119,836,222 - 119,942,080 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 128,431,776 - 128,537,642 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 126,092,272 - 126,198,124 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 121,235,230 - 121,340,932 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 121,235,119 - 121,342,444 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 128,669,534 - 128,777,078 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 116,308,387 - 116,416,414 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 3 116,213,959 - 116,321,987 (+) NCBI Celera 3 114,768,654 - 114,872,632 (+) NCBI Celera Cytogenetic Map 3 q36 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Mertk Rat fundus dystrophy ISO RGD:731631 8554872 ClinVar Annotator: match by term: Retinal dystrophy ClinVar PMID:11062461|PMID:11727200|PMID:15111602|PMID:16199547|PMID:17301963|PMID:17576681|PMID:20300561|PMID:21677792|PMID:22180149|PMID:22581970|PMID:22939401|PMID:24033266|PMID:24265693|PMID:24625443|PMID:24938718|PMID:25097241|PMID:25324289|PMID:25525159|PMID:25741868|PMID:26103963|PMID:26355662|PMID:26667666|PMID:26700204|PMID:27208204|PMID:28041643|PMID:28378820|PMID:28462455|PMID:28492532|PMID:28559085|PMID:29068140|PMID:29074561|PMID:29555955|PMID:29659094|PMID:30416333|PMID:3055739|PMID:30557390|PMID:30718709|PMID:31054281|PMID:31370859|PMID:31429209|PMID:31456290|PMID:31589614|PMID:31736247|PMID:3196484|PMID:31964843|PMID:32036094|PMID:32037395|PMID:32326409|PMID:32483926|PMID:3253185|PMID:32531858|PMID:32552793|PMID:32581362|PMID:32783370|PMID:33090715|PMID:33353011|PMID:33921607|PMID:34315337|PMID:34598035|PMID:34906470|PMID:35836572|PMID:36036427|PMID:36284670|PMID:36460718|PMID:36524988|PMID:36819107|PMID:36909829|PMID:9536098 Mertk Rat genetic disease ISO RGD:731631 8554872 ClinVar Annotator: match by term: Inborn genetic diseases ClinVar PMID:16199547|PMID:17301963|PMID:24265693|PMID:25525159|PMID:25741868|PMID:26355662|PMID:28492532|PMID:29659094|PMID:31370859|PMID:31429209|PMID:31589614|PMID:31964843|PMID:32326409|PMID:32552793|PMID:34598035|PMID:36909829 Mertk Rat optic atrophy ISO RGD:731631 8554872 ClinVar Annotator: match by term: Optic atrophy ClinVar PMID:22939401|PMID:25741868|PMID:28492532 Mertk Rat retinitis pigmentosa ISO RGD:731631 8554872 ClinVar Annotator: match by term: Autosomal recessive retinitis pigmentosa | ClinVar Annotator: match by term: more ... ClinVar PMID:11062461|PMID:15111602|PMID:16199547|PMID:16714263|PMID:17301963|PMID:17576681|PMID:19956407|PMID:20300561|PMID:22180149|PMID:22581970|PMID:22939401|PMID:24265693|PMID:24625443|PMID:24938718|PMID:25097241|PMID:25324289|PMID:25525159|PMID:25741868|PMID:26355662|PMID:26700204|PMID:27208204|PMID:28041643|PMID:28492532|PMID:28559085|PMID:29068140|PMID:29659094|PMID:30054919|PMID:30718709|PMID:31054281|PMID:31370859|PMID:31429209|PMID:31456290|PMID:31589614|PMID:31725702|PMID:31964843|PMID:32036094|PMID:32326409|PMID:32483926|PMID:32531858|PMID:32552793|PMID:32581362|PMID:33090715|PMID:33353011|PMID:34598035|PMID:34906470|PMID:36460718|PMID:36819107|PMID:36909829|PMID:9536098 Mertk Rat retinitis pigmentosa ISO RGD:731631 8554872 ClinVar Annotator: match by term: Autosomal recessive retinitis pigmentosa | ClinVar Annotator: match by term: more ... ClinVar PMID:11062461|PMID:15111602|PMID:16199547|PMID:16714263|PMID:17301963|PMID:17576681|PMID:19956407|PMID:20300561|PMID:22180149|PMID:22939401|PMID:24265693|PMID:24625443|PMID:24938718|PMID:25097241|PMID:25324289|PMID:25741868|PMID:25741905|PMID:25741913|PMID:25741914|PMID:26355662|PMID:26700204|PMID:27208204|PMID:28041643|PMID:28492532|PMID:28559085|PMID:29068140|PMID:29659094|PMID:30054919|PMID:30718709|PMID:31054281|PMID:31725702|PMID:32036094|PMID:33353011|PMID:34906470|PMID:36909829|PMID:9536098 Mertk Rat retinitis pigmentosa ISO RGD:731631 8554872 ClinVar Annotator: match by term: Autosomal recessive retinitis pigmentosa | ClinVar Annotator: match by term: more ... ClinVar PMID:11062461|PMID:11592982|PMID:15111602|PMID:16199547|PMID:16714263|PMID:17301963|PMID:17576681|PMID:19956407|PMID:20300561|PMID:22180149|PMID:22939401|PMID:24265693|PMID:24625443|PMID:24938718|PMID:25097241|PMID:25741868|PMID:26263531|PMID:26355662|PMID:26700204|PMID:27208204|PMID:28041643|PMID:28492532|PMID:28559085|PMID:29068140|PMID:29659094|PMID:30054919|PMID:30718709|PMID:31725702|PMID:9536098 Mertk Rat retinitis pigmentosa ISO RGD:731631 8554872 ClinVar Annotator: match by term: Autosomal recessive retinitis pigmentosa | ClinVar Annotator: match by term: more ... ClinVar PMID:11062461|PMID:15111602|PMID:16199547|PMID:16714263|PMID:17301963|PMID:17576681|PMID:19956407|PMID:20300561|PMID:22180149|PMID:22939401|PMID:24265693|PMID:24625443|PMID:24938718|PMID:25097241|PMID:25324289|PMID:25741868|PMID:26355662|PMID:26700204|PMID:27208204|PMID:28041643|PMID:28492532|PMID:28559085|PMID:29068140|PMID:29659094|PMID:30054919|PMID:30718709|PMID:31054281|PMID:31725702|PMID:32036094|PMID:33353011|PMID:34906470|PMID:36909829|PMID:9536098 Mertk Rat retinitis pigmentosa 38 ISO RGD:731631 8554872 ClinVar Annotator: match by term: MERTK-related condition | ClinVar Annotator: match by term: Retinitis pigmentosa more ... ClinVar PMID:11062461|PMID:11727200|PMID:15111602|PMID:16199547|PMID:16714263|PMID:17301963|PMID:17576681|PMID:19956407|PMID:20300561|PMID:21677792|PMID:22180149|PMID:22939401|PMID:24033266|PMID:24265693|PMID:24938718|PMID:25097241|PMID:25324289|PMID:25326637|PMID:25412400|PMID:25525159|PMID:25741868|PMID:26147992|PMID:26263531|PMID:26355662|PMID:26872967|PMID:27160483|PMID:28041643|PMID:28462455|PMID:28492532|PMID:28559085|PMID:29068140|PMID:29074561|PMID:29659094|PMID:30054919|PMID:30718709|PMID:30851773|PMID:31054281|PMID:31370859|PMID:31429209|PMID:31456290|PMID:31589614|PMID:31690835|PMID:31725702|PMID:31964843|PMID:32036094|PMID:32037395|PMID:32326409|PMID:32552793|PMID:32581362|PMID:32783370|PMID:33090715|PMID:33353011|PMID:34598035|PMID:34906470|PMID:36460718|PMID:36819107|PMID:36909829|PMID:9536098
Only show annotations with direct experimental evidence (0 objects hidden)
Mertk Rat 1,1-dichloroethene decreases expression ISO RGD:731632 6480464 vinylidene chloride results in decreased expression of MERTK mRNA CTD PMID:26682919 Mertk Rat 1,2-dimethylhydrazine decreases expression ISO RGD:731632 6480464 1,2-Dimethylhydrazine results in decreased expression of MERTK mRNA CTD PMID:22206623 Mertk Rat 17beta-estradiol increases expression ISO RGD:731631 6480464 Estradiol results in increased expression of MERTK mRNA CTD PMID:24758408 Mertk Rat 17beta-estradiol decreases expression ISO RGD:731632 6480464 Estradiol results in decreased expression of MERTK mRNA CTD PMID:39298647 Mertk Rat 17beta-estradiol increases expression EXP 6480464 Estradiol results in increased expression of MERTK mRNA CTD PMID:32145629 Mertk Rat 17beta-estradiol multiple interactions ISO RGD:731631 6480464 [Estradiol co-treated with EGF protein] results in increased expression of MERTK mRNA; [Estradiol co-treated with more ... CTD PMID:24758408|PMID:30165855 Mertk Rat 17beta-hydroxy-5alpha-androstan-3-one increases expression ISO RGD:731631 6480464 Dihydrotestosterone results in increased expression of MERTK mRNA CTD PMID:29581250 Mertk Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO RGD:731631 6480464 Tetrachlorodibenzodioxin results in decreased expression of MERTK mRNA CTD PMID:20106945 Mertk Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of MERTK mRNA CTD PMID:33387578 Mertk Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of MERTK mRNA CTD PMID:22298810 Mertk Rat 2-palmitoylglycerol increases expression ISO RGD:731631 6480464 2-palmitoylglycerol results in increased expression of MERTK mRNA CTD PMID:37199045 Mertk Rat 3,4-methylenedioxymethamphetamine increases expression ISO RGD:731632 6480464 N-Methyl-3,4-methylenedioxyamphetamine results in increased expression of MERTK mRNA CTD PMID:26251327 Mertk Rat 4,4'-sulfonyldiphenol increases expression ISO RGD:731632 6480464 bisphenol S results in increased expression of MERTK mRNA CTD PMID:30951980 Mertk Rat 4,4'-sulfonyldiphenol decreases expression ISO RGD:731632 6480464 bisphenol S results in decreased expression of MERTK mRNA CTD PMID:39298647 Mertk Rat 5-aza-2'-deoxycytidine affects expression ISO RGD:731631 6480464 Decitabine affects the expression of MERTK mRNA CTD PMID:23300844 Mertk Rat 8-Br-cAMP decreases expression ISO RGD:731631 6480464 8-Bromo Cyclic Adenosine Monophosphate results in decreased expression of MERTK mRNA CTD PMID:22079614 Mertk Rat acrylamide increases expression ISO RGD:731631 6480464 Acrylamide results in increased expression of MERTK mRNA CTD PMID:32763439 Mertk Rat ADP increases response to substance ISO RGD:731631 6480464 MERTK protein results in increased susceptibility to Adenosine Diphosphate CTD PMID:15733062 Mertk Rat aflatoxin B1 increases methylation ISO RGD:731631 6480464 Aflatoxin B1 results in increased methylation of MERTK gene; Aflatoxin B1 results in increased methylation more ... CTD PMID:27153756|PMID:30157460 Mertk Rat aflatoxin B1 decreases expression ISO RGD:731631 6480464 Aflatoxin B1 results in decreased expression of MERTK mRNA CTD PMID:32234424 Mertk Rat aldrin multiple interactions ISO RGD:731631 6480464 [Hexachlorocyclohexane co-treated with Aldrin co-treated with Dieldrin co-treated with Endrin co-treated with Dichlorodiphenyl Dichloroethylene co-treated more ... CTD PMID:28263720 Mertk Rat all-trans-retinoic acid increases expression ISO RGD:731631 6480464 Tretinoin results in increased expression of MERTK mRNA CTD PMID:33167477 Mertk Rat alpha-Zearalanol multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in increased expression of MERTK mRNA CTD PMID:35163327 Mertk Rat ammonium chloride affects expression EXP 6480464 Ammonium Chloride affects the expression of MERTK mRNA CTD PMID:16483693 Mertk Rat antirheumatic drug decreases expression ISO RGD:731631 6480464 Antirheumatic Agents results in decreased expression of MERTK mRNA CTD PMID:24449571 Mertk Rat arsenite(3-) multiple interactions ISO RGD:731631 6480464 arsenite inhibits the reaction [G3BP1 protein binds to MERTK mRNA] CTD PMID:32406909 Mertk Rat arsenous acid decreases expression ISO RGD:731631 6480464 Arsenic Trioxide results in decreased expression of MERTK mRNA CTD PMID:20458559 Mertk Rat arsenous acid increases expression ISO RGD:731631 6480464 Arsenic Trioxide results in increased expression of MERTK mRNA CTD PMID:29633893 Mertk Rat benzo[a]pyrene increases mutagenesis ISO RGD:731631 6480464 Benzo(a)pyrene results in increased mutagenesis of MERTK gene CTD PMID:25435355 Mertk Rat benzo[a]pyrene affects methylation ISO RGD:731631 6480464 Benzo(a)pyrene affects the methylation of MERTK promoter CTD PMID:27901495 Mertk Rat benzo[a]pyrene increases expression ISO RGD:731632 6480464 Benzo(a)pyrene results in increased expression of MERTK mRNA CTD PMID:21569818|PMID:22228805|PMID:22610609 Mertk Rat benzo[a]pyrene decreases expression ISO RGD:731631 6480464 Benzo(a)pyrene results in decreased expression of MERTK mRNA CTD PMID:20064835|PMID:20106945 Mertk Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of MERTK mRNA CTD PMID:25181051|PMID:30816183|PMID:32528016|PMID:34947998 Mertk Rat bisphenol F increases expression ISO RGD:731632 6480464 bisphenol F results in increased expression of MERTK mRNA CTD PMID:30951980 Mertk Rat bleomycin A2 multiple interactions ISO RGD:731632 6480464 Bleomycin affects the localization of and affects the expression of MERTK protein CTD PMID:22687607 Mertk Rat bleomycin A2 increases phosphorylation ISO RGD:731632 6480464 Bleomycin results in increased phosphorylation of MERTK protein CTD PMID:22687607 Mertk Rat cadmium dichloride decreases expression ISO RGD:731631 6480464 Cadmium Chloride results in decreased expression of MERTK mRNA CTD PMID:38382870 Mertk Rat caffeine decreases phosphorylation ISO RGD:731631 6480464 Caffeine results in decreased phosphorylation of MERTK protein CTD PMID:35688186 Mertk Rat calcitriol increases expression ISO RGD:731631 6480464 Calcitriol results in increased expression of MERTK mRNA CTD PMID:21592394 Mertk Rat calcitriol multiple interactions ISO RGD:731631 6480464 [Testosterone co-treated with Calcitriol] results in increased expression of MERTK mRNA CTD PMID:21592394 Mertk Rat calix[6]arene decreases expression ISO RGD:731631 6480464 calix(6)arene results in decreased expression of MERTK protein CTD PMID:23872419 Mertk Rat carbon nanotube affects expression ISO RGD:731632 6480464 Nanotubes, Carbon affects the expression of MERTK mRNA CTD PMID:25554681 Mertk Rat CGP 52608 multiple interactions ISO RGD:731631 6480464 CGP 52608 promotes the reaction [RORA protein binds to MERTK gene] CTD PMID:28238834 Mertk Rat chlordecone increases expression ISO RGD:731632 6480464 Chlordecone results in increased expression of MERTK mRNA CTD PMID:33711761 Mertk Rat chloroprene increases expression ISO RGD:731632 6480464 Chloroprene results in increased expression of MERTK mRNA CTD PMID:23125180 Mertk Rat chromium(6+) affects expression ISO RGD:731632 6480464 chromium hexavalent ion affects the expression of MERTK mRNA CTD PMID:28472532 Mertk Rat cisplatin affects expression ISO RGD:731631 6480464 Cisplatin affects the expression of MERTK mRNA CTD PMID:23300844 Mertk Rat cisplatin multiple interactions ISO RGD:731631 6480464 [Cisplatin co-treated with jinfukang] results in increased expression of MERTK mRNA CTD PMID:27392435 Mertk Rat cisplatin increases expression ISO RGD:731631 6480464 Cisplatin results in increased expression of MERTK mRNA CTD PMID:27392435 Mertk Rat clobetasol increases expression ISO RGD:731632 6480464 Clobetasol results in increased expression of MERTK mRNA CTD PMID:27462272 Mertk Rat clofibrate decreases expression ISO RGD:731632 6480464 Clofibrate results in decreased expression of MERTK mRNA CTD PMID:17585979 Mertk Rat clofibrate multiple interactions ISO RGD:731632 6480464 [Clofibrate co-treated with Acetaminophen] affects the expression of MERTK mRNA; PPARA affects the reaction [[Clofibrate more ... CTD PMID:17585979 Mertk Rat copper atom multiple interactions ISO RGD:731631 6480464 [NSC 689534 binds to Copper] which results in increased expression of MERTK mRNA CTD PMID:20971185 Mertk Rat copper(0) multiple interactions ISO RGD:731631 6480464 [NSC 689534 binds to Copper] which results in increased expression of MERTK mRNA CTD PMID:20971185 Mertk Rat crocidolite asbestos decreases expression ISO RGD:731632 6480464 Asbestos, Crocidolite results in decreased expression of MERTK mRNA CTD PMID:29279043 Mertk Rat Cuprizon increases expression EXP 6480464 Cuprizone results in increased expression of MERTK mRNA CTD PMID:27523638 Mertk Rat cypermethrin affects expression ISO RGD:731632 6480464 cypermethrin affects the expression of MERTK mRNA CTD PMID:29020013 Mertk Rat cytarabine decreases expression ISO RGD:731631 6480464 Cytarabine results in decreased expression of MERTK mRNA CTD PMID:21198554 Mertk Rat dabigatran increases expression ISO RGD:731632 6480464 Dabigatran results in increased expression of MERTK mRNA CTD PMID:27397090 Mertk Rat DDD multiple interactions ISO RGD:731631 6480464 [Hexachlorocyclohexane co-treated with Aldrin co-treated with Dieldrin co-treated with Endrin co-treated with Dichlorodiphenyl Dichloroethylene co-treated more ... CTD PMID:28263720 Mertk Rat DDE multiple interactions ISO RGD:731631 6480464 [Hexachlorocyclohexane co-treated with Aldrin co-treated with Dieldrin co-treated with Endrin co-treated with Dichlorodiphenyl Dichloroethylene co-treated more ... CTD PMID:28263720 Mertk Rat DDT multiple interactions ISO RGD:731631 6480464 [Hexachlorocyclohexane co-treated with Aldrin co-treated with Dieldrin co-treated with Endrin co-treated with Dichlorodiphenyl Dichloroethylene co-treated more ... CTD PMID:28263720 Mertk Rat dexamethasone increases expression ISO RGD:731632 6480464 Dexamethasone results in increased expression of MERTK mRNA CTD PMID:22733784 Mertk Rat diarsenic trioxide decreases expression ISO RGD:731631 6480464 Arsenic Trioxide results in decreased expression of MERTK mRNA CTD PMID:20458559 Mertk Rat diarsenic trioxide increases expression ISO RGD:731631 6480464 Arsenic Trioxide results in increased expression of MERTK mRNA CTD PMID:29633893 Mertk Rat dieldrin multiple interactions ISO RGD:731631 6480464 [Hexachlorocyclohexane co-treated with Aldrin co-treated with Dieldrin co-treated with Endrin co-treated with Dichlorodiphenyl Dichloroethylene co-treated more ... CTD PMID:28263720 Mertk Rat disodium selenite decreases expression ISO RGD:731632 6480464 Sodium Selenite results in decreased expression of MERTK mRNA CTD PMID:23274088 Mertk Rat doxorubicin decreases expression ISO RGD:731631 6480464 Doxorubicin results in decreased expression of MERTK mRNA CTD PMID:29803840 Mertk Rat endosulfan increases expression EXP 6480464 Endosulfan results in increased expression of MERTK mRNA CTD PMID:29391264 Mertk Rat endrin multiple interactions ISO RGD:731631 6480464 [Hexachlorocyclohexane co-treated with Aldrin co-treated with Dieldrin co-treated with Endrin co-treated with Dichlorodiphenyl Dichloroethylene co-treated more ... CTD PMID:28263720 Mertk Rat epoxiconazole decreases expression ISO RGD:731632 6480464 epoxiconazole results in decreased expression of MERTK mRNA CTD PMID:35436446 Mertk Rat ethanol increases expression ISO RGD:731632 6480464 Ethanol results in increased expression of MERTK mRNA CTD PMID:30319688 Mertk Rat ethanol affects expression ISO RGD:731632 6480464 Ethanol affects the expression of MERTK mRNA CTD PMID:30319688 Mertk Rat fenofibrate increases expression ISO RGD:731631 6480464 Fenofibrate results in increased expression of MERTK mRNA CTD PMID:25572481 Mertk Rat folic acid decreases expression ISO RGD:731632 6480464 Folic Acid results in decreased expression of MERTK mRNA CTD PMID:25629700 Mertk Rat gamma-hexachlorocyclohexane multiple interactions ISO RGD:731631 6480464 [Hexachlorocyclohexane co-treated with Aldrin co-treated with Dieldrin co-treated with Endrin co-treated with Dichlorodiphenyl Dichloroethylene co-treated more ... CTD PMID:28263720 Mertk Rat lead diacetate increases expression EXP 6480464 lead acetate results in increased expression of MERTK mRNA CTD PMID:22641619 Mertk Rat lidocaine increases expression EXP 6480464 Lidocaine results in increased expression of MERTK mRNA CTD PMID:35283115 Mertk Rat lipopolysaccharide increases cleavage ISO RGD:731631 6480464 Lipopolysaccharides results in increased cleavage of MERTK protein CTD PMID:17047157 Mertk Rat lipopolysaccharide decreases expression ISO RGD:731631 6480464 Lipopolysaccharides results in decreased expression of MERTK mRNA CTD PMID:35811015 Mertk Rat lipopolysaccharide multiple interactions ISO RGD:731631 6480464 [S-(1,2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of MERTK mRNA; [S-(1,2-dichlorovinyl)cysteine more ... CTD PMID:35811015 Mertk Rat lipopolysaccharide decreases expression ISO RGD:731632 6480464 Lipopolysaccharides results in decreased expression of MERTK mRNA CTD PMID:25890327 Mertk Rat methylisothiazolinone increases expression ISO RGD:731631 6480464 2-methyl-4-isothiazolin-3-one results in increased expression of MERTK mRNA CTD PMID:31629900 Mertk Rat nickel atom decreases expression ISO RGD:731631 6480464 Nickel results in decreased expression of MERTK mRNA CTD PMID:24768652|PMID:25583101 Mertk Rat nickel dichloride decreases expression ISO RGD:731631 6480464 nickel chloride results in decreased expression of MERTK mRNA CTD PMID:17312168 Mertk Rat organophosphorus compound decreases expression ISO RGD:731631 6480464 Organophosphorus Compounds results in decreased expression of MERTK protein CTD PMID:39115886 Mertk Rat oxaliplatin multiple interactions EXP 6480464 [oxaliplatin co-treated with Topotecan] results in decreased expression of MERTK mRNA CTD PMID:25729387 Mertk Rat oxaliplatin increases expression EXP 6480464 oxaliplatin results in increased expression of MERTK mRNA CTD PMID:25729387 Mertk Rat ozone multiple interactions ISO RGD:731631 6480464 [Air Pollutants results in increased abundance of Ozone] which results in increased expression of MERTK more ... CTD PMID:26035830 Mertk Rat ozone multiple interactions ISO RGD:731632 6480464 [Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in decreased more ... CTD PMID:34911549 Mertk Rat paracetamol multiple interactions ISO RGD:731632 6480464 [Clofibrate co-treated with Acetaminophen] affects the expression of MERTK mRNA; PPARA affects the reaction [[Clofibrate more ... CTD PMID:17585979 Mertk Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of MERTK mRNA CTD PMID:33387578 Mertk Rat paracetamol increases expression ISO RGD:731631 6480464 Acetaminophen results in increased expression of MERTK mRNA CTD PMID:29067470 Mertk Rat paraquat increases expression ISO RGD:731632 6480464 Paraquat results in increased expression of MERTK mRNA CTD PMID:21463325 Mertk Rat perfluorooctane-1-sulfonic acid increases expression ISO RGD:731631 6480464 perfluorooctane sulfonic acid results in increased expression of MERTK protein CTD PMID:38758093 Mertk Rat perfluorooctanoic acid multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in increased expression of MERTK mRNA CTD PMID:35163327 Mertk Rat perfluorooctanoic acid increases expression ISO RGD:731631 6480464 perfluorooctanoic acid results in increased expression of MERTK mRNA CTD PMID:36326898 Mertk Rat perfluorooctanoic acid decreases expression EXP 6480464 perfluorooctanoic acid results in decreased expression of MERTK mRNA CTD PMID:35163327 Mertk Rat phorbol 13-acetate 12-myristate increases cleavage ISO RGD:731631 6480464 Tetradecanoylphorbol Acetate results in increased cleavage of MERTK protein CTD PMID:17047157 Mertk Rat pirinixic acid multiple interactions ISO RGD:731631 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in more ... CTD PMID:19710929 Mertk Rat potassium chromate increases expression ISO RGD:731631 6480464 potassium chromate(VI) results in increased expression of MERTK mRNA CTD PMID:22714537 Mertk Rat propiconazole decreases expression ISO RGD:731632 6480464 propiconazole results in decreased expression of MERTK mRNA CTD PMID:21278054 Mertk Rat rotenone increases expression EXP 6480464 Rotenone results in increased expression of MERTK mRNA CTD PMID:19013527|PMID:28374803 Mertk Rat S-(1,2-dichlorovinyl)-L-cysteine multiple interactions ISO RGD:731631 6480464 [S-(1,2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of MERTK mRNA; [S-(1,2-dichlorovinyl)cysteine more ... CTD PMID:35811015 Mertk Rat serpentine asbestos decreases expression ISO RGD:731631 6480464 Asbestos, Serpentine results in decreased expression of MERTK mRNA CTD PMID:21148743 Mertk Rat silicon dioxide increases expression ISO RGD:731632 6480464 Silicon Dioxide results in increased expression of MERTK mRNA; Silicon Dioxide results in increased expression more ... CTD PMID:33232774 Mertk Rat silicon dioxide affects response to substance ISO RGD:731632 6480464 MERTK protein affects the susceptibility to Silicon Dioxide CTD PMID:31284023 Mertk Rat silicon dioxide multiple interactions ISO RGD:731632 6480464 GAS6 gene mutant form inhibits the reaction [Silicon Dioxide results in increased expression of MERTK more ... CTD PMID:31284023|PMID:33232774 Mertk Rat simvastatin multiple interactions ISO RGD:731631 6480464 [Hexachlorocyclohexane co-treated with Aldrin co-treated with Dieldrin co-treated with Endrin co-treated with Dichlorodiphenyl Dichloroethylene co-treated more ... CTD PMID:28263720 Mertk Rat sodium arsenite increases expression ISO RGD:731631 6480464 sodium arsenite results in increased expression of MERTK mRNA CTD PMID:22714537 Mertk Rat sodium arsenite decreases expression ISO RGD:731631 6480464 sodium arsenite results in decreased expression of MERTK mRNA CTD PMID:29301061 Mertk Rat sodium arsenite decreases expression ISO RGD:731632 6480464 sodium arsenite results in decreased expression of MERTK mRNA CTD PMID:16014739 Mertk Rat sodium dichromate decreases expression ISO RGD:731631 6480464 sodium bichromate results in decreased expression of MERTK mRNA CTD PMID:17685462 Mertk Rat sulforaphane decreases expression ISO RGD:731632 6480464 sulforaphane results in decreased expression of MERTK mRNA CTD PMID:30529165 Mertk Rat sunitinib decreases expression ISO RGD:731631 6480464 Sunitinib results in decreased expression of MERTK mRNA CTD PMID:31533062 Mertk Rat tamoxifen multiple interactions ISO RGD:731631 6480464 Tamoxifen inhibits the reaction [[Estradiol co-treated with EGF protein] results in increased expression of MERTK more ... CTD PMID:24758408 Mertk Rat testosterone multiple interactions ISO RGD:731631 6480464 [Testosterone co-treated with Calcitriol] results in increased expression of MERTK mRNA CTD PMID:21592394 Mertk Rat testosterone increases expression ISO RGD:731631 6480464 Testosterone results in increased expression of MERTK mRNA CTD PMID:21592394 Mertk Rat tetrachloromethane affects expression ISO RGD:731632 6480464 Carbon Tetrachloride affects the expression of MERTK mRNA CTD PMID:17484886 Mertk Rat tetrachloromethane increases expression ISO RGD:731632 6480464 Carbon Tetrachloride results in increased expression of MERTK mRNA CTD PMID:27339419 Mertk Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of MERTK mRNA CTD PMID:34492290 Mertk Rat topotecan multiple interactions EXP 6480464 [oxaliplatin co-treated with Topotecan] results in decreased expression of MERTK mRNA CTD PMID:25729387 Mertk Rat tremolite asbestos decreases expression ISO RGD:731632 6480464 tremolite results in decreased expression of MERTK mRNA CTD PMID:29279043 Mertk Rat trichostatin A decreases expression ISO RGD:731631 6480464 trichostatin A results in decreased expression of MERTK mRNA CTD PMID:24935251 Mertk Rat trichostatin A affects expression ISO RGD:731631 6480464 trichostatin A affects the expression of MERTK mRNA CTD PMID:28542535 Mertk Rat triclosan increases expression ISO RGD:731631 6480464 Triclosan results in increased expression of MERTK mRNA CTD PMID:30510588 Mertk Rat urethane increases expression ISO RGD:731631 6480464 Urethane results in increased expression of MERTK mRNA CTD PMID:28818685 Mertk Rat valproic acid increases expression ISO RGD:731631 6480464 Valproic Acid results in increased expression of MERTK mRNA CTD PMID:19101580|PMID:23179753|PMID:23527032|PMID:24935251|PMID:28001369|PMID:29154799|PMID:37505509 Mertk Rat vinclozolin decreases methylation EXP 6480464 vinclozolin results in decreased methylation of MERTK gene CTD PMID:31079544
1,1-dichloroethene (ISO) 1,2-dimethylhydrazine (ISO) 17beta-estradiol (EXP,ISO) 17beta-hydroxy-5alpha-androstan-3-one (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2-palmitoylglycerol (ISO) 3,4-methylenedioxymethamphetamine (ISO) 4,4'-sulfonyldiphenol (ISO) 5-aza-2'-deoxycytidine (ISO) 8-Br-cAMP (ISO) acrylamide (ISO) ADP (ISO) aflatoxin B1 (ISO) aldrin (ISO) all-trans-retinoic acid (ISO) alpha-Zearalanol (EXP) ammonium chloride (EXP) antirheumatic drug (ISO) arsenite(3-) (ISO) arsenous acid (ISO) benzo[a]pyrene (ISO) bisphenol A (EXP) bisphenol F (ISO) bleomycin A2 (ISO) cadmium dichloride (ISO) caffeine (ISO) calcitriol (ISO) calix[6]arene (ISO) carbon nanotube (ISO) CGP 52608 (ISO) chlordecone (ISO) chloroprene (ISO) chromium(6+) (ISO) cisplatin (ISO) clobetasol (ISO) clofibrate (ISO) copper atom (ISO) copper(0) (ISO) crocidolite asbestos (ISO) Cuprizon (EXP) cypermethrin (ISO) cytarabine (ISO) dabigatran (ISO) DDD (ISO) DDE (ISO) DDT (ISO) dexamethasone (ISO) diarsenic trioxide (ISO) dieldrin (ISO) disodium selenite (ISO) doxorubicin (ISO) endosulfan (EXP) endrin (ISO) epoxiconazole (ISO) ethanol (ISO) fenofibrate (ISO) folic acid (ISO) gamma-hexachlorocyclohexane (ISO) lead diacetate (EXP) lidocaine (EXP) lipopolysaccharide (ISO) methylisothiazolinone (ISO) nickel atom (ISO) nickel dichloride (ISO) organophosphorus compound (ISO) oxaliplatin (EXP) ozone (ISO) paracetamol (EXP,ISO) paraquat (ISO) perfluorooctane-1-sulfonic acid (ISO) perfluorooctanoic acid (EXP,ISO) phorbol 13-acetate 12-myristate (ISO) pirinixic acid (ISO) potassium chromate (ISO) propiconazole (ISO) rotenone (EXP) S-(1,2-dichlorovinyl)-L-cysteine (ISO) serpentine asbestos (ISO) silicon dioxide (ISO) simvastatin (ISO) sodium arsenite (ISO) sodium dichromate (ISO) sulforaphane (ISO) sunitinib (ISO) tamoxifen (ISO) testosterone (ISO) tetrachloromethane (ISO) thioacetamide (EXP) topotecan (EXP) tremolite asbestos (ISO) trichostatin A (ISO) triclosan (ISO) urethane (ISO) valproic acid (ISO) vinclozolin (EXP)
Biological Process
apoptotic cell clearance (IEA,ISO) cell migration (IBA) cell surface receptor protein tyrosine kinase signaling pathway (IBA) establishment of localization in cell (IEA,ISO) lymphocyte activation (IEA,ISO) natural killer cell differentiation (IEA,ISO) negative regulation of cytokine production (IEA,ISO) negative regulation of leukocyte apoptotic process (IEA,ISO) negative regulation of lymphocyte activation (IEA,ISO) nervous system development (IBA) neutrophil clearance (IEA,ISO) phagocytosis (IBA,IDA,IEA,IMP,ISO) platelet activation (IEA,ISO) positive regulation of phagocytosis (IDA,IEA,ISO) positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA,ISO) protein phosphorylation (IDA) retina development in camera-type eye (IEA,ISO) secretion by cell (IEA,ISO) spermatogenesis (IEA,ISO) substrate adhesion-dependent cell spreading (IEA,ISO) vagina development (IEA,ISO)
1.
Mer receptor tyrosine kinase signaling participates in platelet function.
Chen C, etal., Arterioscler Thromb Vasc Biol. 2004 Jun;24(6):1118-23. Epub 2004 May 6.
2.
Mutation of the receptor tyrosine kinase gene Mertk in the retinal dystrophic RCS rat.
D'Cruz PM, etal., Hum Mol Genet 2000 Mar 1;9(4):645-51.
3.
Mertk triggers uptake of photoreceptor outer segments during phagocytosis by cultured retinal pigment epithelial cells.
Feng W, etal., J Biol Chem 2002 May 10;277(19):17016-22. Epub 2002 Feb 22.
4.
Focal adhesion kinase signaling promotes phagocytosis of integrin-bound photoreceptors.
Finnemann SC EMBO J 2003 Aug 15;22(16):4143-54.
5.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6.
Rat ISS GO annotations from GOA human gene data--August 2006
GOA data from the GO Consortium
7.
Rat ISS GO annotations from MGI mouse gene data--August 2006
MGD data from the GO Consortium
8.
Electronic Transfer of LocusLink and RefSeq Data
NCBI rat LocusLink and RefSeq merged data July 26, 2002
9.
OMIM Disease Annotation Pipeline
OMIM Disease Annotation Pipeline
10.
GOA pipeline
RGD automated data pipeline
11.
ClinVar Automated Import and Annotation Pipeline
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.
Data Import for Chemical-Gene Interactions
RGD automated import pipeline for gene-chemical interactions
13.
Correction of the retinal dystrophy phenotype of the RCS rat by viral gene transfer of Mertk.
Vollrath D, etal., Proc Natl Acad Sci U S A 2001 Oct 23;98(22):12584-9.
Mertk (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 136,391,936 - 136,498,366 (+) NCBI GRCr8 mRatBN7.2 3 115,939,351 - 116,045,141 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 115,939,351 - 116,046,554 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 119,836,222 - 119,942,080 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 128,431,776 - 128,537,642 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 126,092,272 - 126,198,124 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 121,235,230 - 121,340,932 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 121,235,119 - 121,342,444 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 128,669,534 - 128,777,078 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 116,308,387 - 116,416,414 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 3 116,213,959 - 116,321,987 (+) NCBI Celera 3 114,768,654 - 114,872,632 (+) NCBI Celera Cytogenetic Map 3 q36 NCBI
MERTK (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 111,898,607 - 112,029,561 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 111,898,607 - 112,029,561 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 112,656,184 - 112,787,138 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 112,372,662 - 112,503,416 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 2 112,372,415 - 112,503,168 NCBI Celera 2 106,258,379 - 106,389,184 (-) NCBI Celera Cytogenetic Map 2 q13 NCBI HuRef 2 105,169,541 - 105,300,438 (+) NCBI HuRef CHM1_1 2 112,661,190 - 112,791,926 (+) NCBI CHM1_1 T2T-CHM13v2.0 2 112,325,012 - 112,456,507 (+) NCBI T2T-CHM13v2.0
Mertk (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 2 128,540,836 - 128,645,082 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 2 128,540,876 - 128,644,814 (+) Ensembl GRCm39 Ensembl GRCm38 2 128,698,915 - 128,803,162 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 2 128,698,956 - 128,802,894 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 2 128,524,733 - 128,627,923 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 2 128,390,438 - 128,493,628 (+) NCBI MGSCv36 mm8 Celera 2 129,929,620 - 130,029,340 (+) NCBI Celera Cytogenetic Map 2 F1 NCBI cM Map 2 62.63 NCBI
Mertk (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955470 2,065,411 - 2,167,909 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955470 2,065,468 - 2,167,909 (-) NCBI ChiLan1.0 ChiLan1.0
MERTK (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 12 16,046,414 - 16,179,196 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2A 16,049,177 - 16,181,960 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2A 89,977,226 - 90,109,970 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2A 113,055,554 - 113,162,556 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 2A 113,056,852 - 113,162,052 (+) Ensembl panpan1.1 panPan2
MERTK (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 17 36,336,787 - 36,445,796 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 17 36,336,861 - 36,445,380 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 17 36,106,597 - 36,218,038 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 17 37,111,333 - 37,223,997 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 17 37,111,394 - 37,223,995 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 17 36,231,212 - 36,343,496 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 17 36,303,304 - 36,415,155 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 17 36,515,620 - 36,628,095 (+) NCBI UU_Cfam_GSD_1.0
Mertk (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
MERTK (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 44,349,385 - 44,483,402 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 44,349,377 - 44,483,400 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 45,947,411 - 45,961,016 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
MERTK (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 14 14,971,858 - 15,100,736 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 14 15,001,471 - 15,101,025 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666080 4,589,380 - 4,720,259 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Mertk (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 233 Count of miRNA genes: 172 Interacting mature miRNAs: 198 Transcripts: ENSRNOT00000023419 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
2312673 Scl63 Serum cholesterol level QTL 63 0.001 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 3 98535255 168026850 Rat 2301414 Kidm37 Kidney mass QTL 37 0.001 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 3 70653097 121056321 Rat 2302373 Gluco39 Glucose level QTL 39 5.01 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 3 98535386 161695835 Rat 70216 Cm14 Cardiac mass QTL 14 2.1 heart mass (VT:0007028) heart wet weight (CMO:0000069) 3 31172320 163586636 Rat 2292591 Esta4 Estrogen-induced thymic atrophy QTL 4 thymus mass (VT:0004954) thymus wet weight (CMO:0000855) 3 47233211 147415807 Rat 1358362 Srcrt2 Stress Responsive Cort QTL 2 2.78 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 3 38192233 133483320 Rat 737818 Hcar12 Hepatocarcinoma resistance QTL 12 2.6 liver integrity trait (VT:0010547) volume of individual liver tumorous lesion (CMO:0001078) 3 29463235 118376539 Rat 1581568 Rf53 Renal function QTL 53 urine total protein amount (VT:0000032) urine protein excretion rate to body weight ratio (CMO:0001099) 3 56395968 161299569 Rat 7387306 Bw124 Body weight QTL 124 3.2 0.0003 body mass (VT:0001259) body weight (CMO:0000012) 3 84091273 129091273 Rat 1578754 Stresp16 Stress response QTL 16 4 0.001 blood renin amount (VT:0003349) plasma renin activity level (CMO:0000116) 3 112681431 157681431 Rat 1300111 Rf12 Renal function QTL 12 3.78 renal blood flow trait (VT:2000006) absolute change in renal blood flow rate (CMO:0001168) 3 61017749 121056321 Rat 1600376 Arunc5 Aerobic running capacity QTL 5 0.21 exercise endurance trait (VT:0002332) maximum distance run on treadmill (CMO:0001406) 3 73376539 118376539 Rat 8694437 Bw167 Body weight QTL 167 22.46 0.001 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 3 91797474 136797474 Rat 8662816 Vetf4 Vascular elastic tissue fragility QTL 4 4 renal artery integrity trait (VT:0010642) number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563) 3 59242096 157323038 Rat 1559282 Emca5 Estrogen-induced mammary cancer QTL 5 3.9 mammary gland integrity trait (VT:0010552) percentage of study population developing mammary tumors during a period of time (CMO:0000948) 3 43827364 169034231 Rat 1581503 Cm58 Cardiac mass QTL 58 2.7 0.05 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 3 43827364 121056321 Rat 1354611 Despr2 Despair related QTL 2 3.03 0.0028 locomotor behavior trait (VT:0001392) amount of time spent in voluntary immobility (CMO:0001043) 3 97084464 142084464 Rat 631649 Bp123 Blood pressure QTL 123 3.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 3 89772419 134772419 Rat 631841 Niddm39 Non-insulin dependent diabetes mellitus QTL 39 3.36 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 3 94856903 159898684 Rat 1358204 Insglur1 Insulin/glucose ratio QTL 1 3.8 blood glucose amount (VT:0000188) serum glucose level (CMO:0000543) 3 115638168 135181505 Rat 619618 Rf3 Renal disease susceptibility QTL 3 6.5 0.001 urine albumin amount (VT:0002871) urine albumin excretion rate to body weight ratio (CMO:0001270) 3 107693393 152693393 Rat 12879848 Bw181 Body weght QTL 181 0.015 body mass (VT:0001259) body weight (CMO:0000012) 3 70348525 121056321 Rat 2301971 Cm71 Cardiac mass QTL 71 4.63 heart left ventricle mass (VT:0007031) heart left ventricle weight (CMO:0000776) 3 41874578 155617519 Rat 2312659 Slep7 Serum leptin concentration QTL 7 0.001 blood leptin amount (VT:0005667) serum leptin level (CMO:0000780) 3 98535255 168026850 Rat 1358885 Bp251 Blood pressure QTL 251 3.8 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 3 14489145 121056321 Rat 2301970 Bw81 Body weight QTL 81 5.19 body mass (VT:0001259) body weight (CMO:0000012) 3 41874578 155617519 Rat 1581546 Pur13 Proteinuria QTL 13 2.93 0.0335 urine total protein amount (VT:0000032) urine protein excretion rate (CMO:0000759) 3 78196190 146592722 Rat 631665 Bw8 Body weight QTL 8 5.5 body mass (VT:0001259) body weight (CMO:0000012) 3 50437042 119183768 Rat 1331758 Bp207 Blood pressure QTL 207 2.848 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 3 112287552 135181505 Rat 1358888 Bp264 Blood pressure QTL 264 4.43 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 3 14489145 121056321 Rat 2293087 Iddm27 Insulin dependent diabetes mellitus QTL 27 2.68 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 3 97551417 147415807 Rat 2312670 Bw94 Body weight QTL 94 0.01 inguinal fat pad mass (VT:0010424) inguinal fat pad weight to body weight ratio (CMO:0001253) 3 98535255 168026850 Rat 724532 Cm17 Cardiac mass QTL 17 2 heart mass (VT:0007028) calculated heart weight (CMO:0000073) 3 95735366 140735366 Rat
AU048840
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 115,948,841 - 115,949,055 (+) MAPPER mRatBN7.2 Rnor_6.0 3 121,244,720 - 121,244,933 NCBI Rnor6.0 Rnor_5.0 3 128,767,375 - 128,767,588 UniSTS Rnor5.0 RGSC_v3.4 3 116,317,877 - 116,318,090 UniSTS RGSC3.4 Celera 3 114,778,144 - 114,778,357 UniSTS Cytogenetic Map 3 q36 UniSTS
MERTK
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 116,036,473 - 116,038,063 (+) MAPPER mRatBN7.2 Rnor_6.0 3 121,332,265 - 121,333,854 NCBI Rnor6.0 Rnor_5.0 3 128,678,440 - 128,680,029 UniSTS Rnor5.0 RGSC_v3.4 3 116,407,747 - 116,409,336 UniSTS RGSC3.4 Celera 3 114,863,955 - 114,865,544 UniSTS Cytogenetic Map 3 q36 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
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Ensembl Acc Id:
ENSRNOT00000023419 ⟹ ENSRNOP00000023419
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 115,968,752 - 116,046,554 (+) Ensembl Rnor_6.0 Ensembl 3 121,235,119 - 121,342,444 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000097978 ⟹ ENSRNOP00000076826
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 115,939,351 - 116,046,554 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000107394 ⟹ ENSRNOP00000082953
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 115,944,529 - 116,046,554 (+) Ensembl
RefSeq Acc Id:
NM_022943 ⟹ NP_075232
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 136,392,574 - 136,498,366 (+) NCBI mRatBN7.2 3 115,939,351 - 116,045,141 (+) NCBI Rnor_6.0 3 121,235,230 - 121,340,932 (+) NCBI Rnor_5.0 3 128,669,534 - 128,777,078 (-) NCBI RGSC_v3.4 3 116,308,387 - 116,416,414 (+) RGD Celera 3 114,768,654 - 114,872,632 (+) RGD
Sequence:
CATCTGTCCGGAGAGAACTGCCAGATCCGCGGCCCCGCGATGGTTCTGGCCCCACTACTGCTGGGGCTGCTGCTGCTATCCGCACTCTGGAATGGAGGCACTGCTGAAAAGGAGGAAGAAATCAAGCC AGATCAGCCATTTTCAGGGCCTTTACCAGGGAGCCTACCAGCTGACCACAGGCCATTCTTCGCCCCTCACTCCAGTGGGGACCAGCTGTCACCATCCCAGACTGGAAGATCACATCCAGCACACACAG CCACTCCCCAGATGACCTCTGCAGCATCAAACCTCCTGCCTCCTGTTGCATTTAAAAACACAATTGGACGCATAGTACTTTCGGAACATAAAAGTGTCAAATTTAATTGCTCGATCAACATTCCTAAC GTGTATCAAGAAACAGCTGGCATTTCGTGGTGGAAAGATGGAAAGGAACTGCTTGGGGCACATCATTCAATCACACAGTTTTATCCTGATGAGGAAGGGGTATCAATAATTGCATTGTTCAGCATAAC CAGTGTGCAGCGCTCAGACAATGGGTCGTACATCTGTAAGATGAAGGTGAACGATAGAGAGGTTGTGTCTGATCCCATATACGTGGAAGTCCAAGGACTCCCTTACTTTACTAAGCAGCCTGAGAGCG TGAATGTCACCAGAAACACAGCCTTCAACCTCACCTGCCAGGCTGTGGGACCCCCTGAGCCCGTCAACATCTTCTGGGTTCAAAATAGCAGCCGTGTTAATGAAAATCCAGAAAGGTCCCCGTCTGTC CTAACTGTCGCTGGTCTGACAGAGACCGCAGTCTTCAGCTGTGAGGCCCACAACGACAAAGGACTGACGGTGTCCAAGGGTGTACAGATCAACATCAAAGTCATCCCTTCCCCACCCACTGAAGTCCA TATCCTCAACAGCACAGCGCACAGCATCCTGGTCTCCTGGGTCCCAGGGTTTGATGGCTACTCCCCACTTCAGAACTGCAGCATTCAGGTCAAGGAAGCTGACCAGCTGAGTAATGGCTCAGTCATGG TTTTTAATACCTCTGCTTCGCCACATCTGTATGAAGTCCAGCAGCTGCAAGCCCTGGCTAATTACAGCGTCACTGTGTCCTGTCGGAATGAGATTGGCTGGTCTGCAGTGAGCCCTTGGATCCTGGCC AGCACTACAGAAGGAGCTCCAGCAGTGGCGCCTCTAAACATCACTGTGTTTCTGAACGAATCCAGCAACAACCTGGAAATCAGATGGACGAAGCCTCCAATTAAGCGGCAGGATGGGGAACTGGTGGG CTACCGGATATCTCACGTGTGGGAGAGTGCGGGGACTTCCAAAGAGCTTTCTGAAGAAGTCAGCCAGAATGGCAGCTGGGCTCAGGTTCCTGTCCAAATGCACAATGCCACCTGCACAGTGAGAATCG CCGTCATCACTAAAGGGGGCATTGGGCCCTTCAGTGAGCCAGTGGACGTAGCCATTCCGGAGCACAGTAGGGTAGATTACGCACCCTCATCAACCCCAGCCCCTGGCAACACCGAGTCTATGCTCATC ATCCTGGGCTGCTTCTGCGGGTTTGTTCTCATGGGGTTGATTCTGTATCTTTCTCTGGCCATCAAAAGGAGAGTCCAGGAAACAAAGTTTGGGGGTGCATTCTCCGAGGAGGACTCCCAATTAGTTGT AAATTACAGAGCAAAGAAGTCCTTCTGTCGGCGAGCCATCGAGCTTACCTTGCAAAGCCTGGGGGTGAGCGAGGAGCTGCAAAACAAGCTAGAAGATGTTGTGGTTGACAGAAATCTTCTAATTCTTG GGAAAGTTCTGGGCGAAGGAGAGTTTGGGTCTGTAATGGAAGGAAATCTGAAGCAGGAAGATGGGACTTCTCAGAAGGTGGCAGTGAAGACCATGAAGTTGGACAACTTTTCTCTACGGGAGATCGAG GAGTTTCTCAGCGAAGCAGCGTGCATGAAAGACTTCAATCACCCAAACGTCATCCGGCTTCTAGGCGTGTGTATAGAACTGAGCTCTCAAGGCATCCCGAAGCCCATGGTGATTTTACCCTTCATGAA ATACGGAGACCTCCACACCTTCCTGCTATATTCCCGGATAGAATCAGTACCGAAGTCCATCCCCCTGCAGACACTGCTGAAGTTCATGGTGGACATTGCCCAGGGAATGGAGTACCTGAGCAGCAGGA ATTTTCTCCACAGGGATTTAGCTGCTCGGAATTGCATGTTGCGGGATGACATGACTGTCTGCGTGGCAGACTTTGGCCTCTCTAAGAAGATTTACAGTGGTGATTATTACCGCCAAGGCCGCATTGCC AAAATGCCTGTGAAGTGGATCGCCATAGAGAGCCTGGCGGACCGAGTCTACACAAGCAAGAGTGACGTGTGGGCTTTTGGCGTGACCATGTGGGAAATAGCAACACGGGGAATGACTCCCTATCCTGG AGTCCAGAACCATGAGATGTACGATTACCTTCTCCACGGCCACAGGCTGAAGCAGCCCGAGGACTGCCTGGATGATCTGTATGAAATCATGTACTCTTGCTGGAGTGCTGATCCCCTGGACCGACCCA CCTTCTCAGTGCTGAGGCTGCAGCTGGAAAAGCTCTCCGAGAGTTTGCCTGATGCCCAGGACAAAGAATCCATCATCTACATCAATACACAGTTACTAGAGAGCTGCGAGGGCCTAGCCAACAGGTCC TCCCTCGCAGGGCTAGACATGAACATTGATCCTGACTCCATCATTGCCTCTTGCACAGCAGGTGCTGCTGTCAGCGTGGTCATGGCGGAAGTTCACGAGAACAACCTTCATGAGGAAAGATACATCTT AAATGGGGGCAACGAGGAATGGGAAGATGTGGCCTCCACTCCATTTGCTACAGTCACAGCTGGAAAAGATGGTGTGTTACCAGAGGACAGACTCACCAAAAATGGCATCTCCTGGTCTCACCATAGTA CGCTACCCTTGGGGAGCCCATCACCAGATGAACTTCTGTTTGCAGACGACTCCTCGGGAGACTCTGAAGTTCTGATGTGA
hide sequence
RefSeq Acc Id:
XM_063284527 ⟹ XP_063140597
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 136,391,936 - 136,480,115 (+) NCBI
RefSeq Acc Id:
NP_075232 ⟸ NM_022943
- Peptide Label:
precursor
- UniProtKB:
P57097 (UniProtKB/Swiss-Prot), A6HQ37 (UniProtKB/TrEMBL), A0A8I5ZYY3 (UniProtKB/TrEMBL)
- Sequence:
MVLAPLLLGLLLLSALWNGGTAEKEEEIKPDQPFSGPLPGSLPADHRPFFAPHSSGDQLSPSQTGRSHPAHTATPQMTSAASNLLPPVAFKNTIGRIVLSEHKSVKFNCSINIPNVYQETAGISWWKD GKELLGAHHSITQFYPDEEGVSIIALFSITSVQRSDNGSYICKMKVNDREVVSDPIYVEVQGLPYFTKQPESVNVTRNTAFNLTCQAVGPPEPVNIFWVQNSSRVNENPERSPSVLTVAGLTETAVFS CEAHNDKGLTVSKGVQINIKVIPSPPTEVHILNSTAHSILVSWVPGFDGYSPLQNCSIQVKEADQLSNGSVMVFNTSASPHLYEVQQLQALANYSVTVSCRNEIGWSAVSPWILASTTEGAPAVAPLN ITVFLNESSNNLEIRWTKPPIKRQDGELVGYRISHVWESAGTSKELSEEVSQNGSWAQVPVQMHNATCTVRIAVITKGGIGPFSEPVDVAIPEHSRVDYAPSSTPAPGNTESMLIILGCFCGFVLMGL ILYLSLAIKRRVQETKFGGAFSEEDSQLVVNYRAKKSFCRRAIELTLQSLGVSEELQNKLEDVVVDRNLLILGKVLGEGEFGSVMEGNLKQEDGTSQKVAVKTMKLDNFSLREIEEFLSEAACMKDFN HPNVIRLLGVCIELSSQGIPKPMVILPFMKYGDLHTFLLYSRIESVPKSIPLQTLLKFMVDIAQGMEYLSSRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDDLYEIMYSCWSADPLDRPTFSVLRLQLEKLSESLPDAQDKESIIYINTQLLESCEGLANRSSLAGLDMNIDPDS IIASCTAGAAVSVVMAEVHENNLHEERYILNGGNEEWEDVASTPFATVTAGKDGVLPEDRLTKNGISWSHHSTLPLGSPSPDELLFADDSSGDSEVLM
hide sequence
Ensembl Acc Id:
ENSRNOP00000023419 ⟸ ENSRNOT00000023419
Ensembl Acc Id:
ENSRNOP00000076826 ⟸ ENSRNOT00000097978
Ensembl Acc Id:
ENSRNOP00000082953 ⟸ ENSRNOT00000107394
RefSeq Acc Id:
XP_063140597 ⟸ XM_063284527
- Peptide Label:
isoform X1
RGD ID: 13692414
Promoter ID: EPDNEW_R2939
Type: multiple initiation site
Name: Mertk_1
Description: MER proto-oncogene, tyrosine kinase
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 3 121,235,112 - 121,235,172 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2015-07-10
Mertk
MER proto-oncogene, tyrosine kinase
Mertk
c-mer proto-oncogene tyrosine kinase
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2005-06-06
Mertk
c-mer proto-oncogene tyrosine kinase
Rdy
retinal dystrophy
Data merged from RGD:3550
737654
APPROVED
2003-04-09
Rdy
retinal dystrophy
Retinal dystrophy
Name updated
629478
APPROVED
2002-06-10
Rdy
Retinal dystrophy
Symbol and Name status set to approved
70586
APPROVED
2002-06-10
Mertk
c-mer proto-oncogene tyrosine kinase
Symbol and Name status set to approved
70586
APPROVED
Note Type
Note
Reference
gene_disease
mutation causes the retinal dystrophy (rdy) phenotype in the Royal College of Surgeons (RCS) rat
69668
gene_disease
mutation causes the retinal dystrophy (rdy) phenotype in the Royal College of Surgeons (RCS) rat
1299193
gene_function
tyrosine kinase receptor
61793
gene_function
tyrosine kinase receptor
69668
gene_mutations_overexpression
gene transfer corrects a defect in retinal pigment epithelium (RPE) phagocytosis in the retinal dystrophy (rdy) locus of the Royal College of Surgeons (RCS) rat by restoring normal phagocytosis of shed photoreceptor outer segments
69668
gene_mutations_overexpression
gene transfer to the eyes of young Royal College of Surgeons (RCS) rats with (rdy) retinal dystrophy increases sensitivity to low intensity light
69668
gene_process
required for proper retina functioning
61793
gene_process
required for proper retina functioning
69668
gene_process
involved as a signaling molecule triggering outer segment uptake during phagocytosis
1299193
gene_product
member of the axl family
61793
gene_product
member of the axl family
69668
gene_protein
994 amino acids
61793
gene_protein
994 amino acids
69668