Insglur1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Insglur1 (Insulin/glucose ratio QTL 1) Rattus norvegicus

Symbol: Insglur1
Name: Insulin/glucose ratio QTL 1
RGD ID: 1358204
Previously known as: insulin resistance 1; Ir1
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: serum glucose level   (CMO:0000543)    
serum insulin level   (CMO:0000358)    
LOD Score: 3.8
P Value: Not Available
Variance: Not Available
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr83136,091,420 - 155,634,702RGD_MAPPER_PIPELINE
mRatBN7.23115,638,168 - 135,181,505RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.03120,917,788 - 141,971,336RGD_MAPPER_PIPELINERnor6.0
Rnor_5.03129,091,119 - 148,388,048RGDRnor5.0
RGSC_v3.43115,996,080 - 136,402,080RGDRGSC3.4
RGSC_v3.13115,901,654 - 136,307,653RGD
Cross Type: Not Available
Strains Crossed: BXS/Ipcv 
JBrowse: View Region in Genome Browser (JBrowse)
Model




  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Insglur1RatInsulin Resistance  IAGP 619533 RGD 

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Insglur1Ratinsulin resistance  IAGP 619533 RGD 

Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Insglur1Ratserum glucose level  IDA 619533 RGD 
Insglur1Ratserum insulin level  IDA 619533 RGD 

Experimental Condition
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Insglur1Ratcontrolled fructose content diet  IDA 619533 RGD 

Measurement Method
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Insglur1Ratblood glucose test strip read by electrochemical glucometer  IDA 619533 RGD 
Insglur1Ratradioimmunoassay  IDA 619533 RGD 

Rat Strain
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Insglur1RatBXS/Ipcv  IEA 619533 RGD 

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Insglur1Ratblood glucose amount  IDA 619533 RGD 


#
Reference Title
Reference Citation
1. Genetic analysis of metabolic defects in the spontaneously hypertensive rat. Pravenec M, etal., Mamm Genome 2002 May;13(5):253-8.


1 to 20 of 240 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
7681354LOC102550367uncharacterized LOC1025503673115713494115795134Rat
1561675Spdye4cspeedy/RINGO cell cycle regulator family, member E4C3115830999115838358Rat
1306629Anapc1anaphase promoting complex subunit 13115850117115930259Rat
69283MertkMER proto-oncogene, tyrosine kinase3115939351116045141Rat
1307907Tmem87btransmembrane protein 87B3116061933116097421Rat
41056854Trnaa-agc45transfer RNA alanine (anticodon AGC) 453116086177116086257Rat
41167816LOC120102056small nucleolar RNA SNORA173116105515116105641Rat
1310131Fbln7fibulin 73116111581116145839Rat
1310458Zc3h8zinc finger CCCH type containing 83116176779116193752Rat
1591768Mthfd1-ps1methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, pseudogene 13116195791116198973Rat
1311061Zc3h6zinc finger CCCH type containing 63116203466116254186Rat
1561442Vinac1vinculin/alpha-catenin family member 13116259951116285108Rat
621113Ttltubulin tyrosine ligase3116298813116328538Rat
620822Polr1bRNA polymerase I subunit B3116333910116358385Rat
1307809Chchd5coiled-coil-helix-coiled-coil-helix domain containing 53116361845116372238Rat
41160055LOC120101659uncharacterized LOC1201016593116391390116393379Rat
621079Slc20a1solute carrier family 20 member 13116427095116441049Rat
7635188LOC102549265uncharacterized LOC1025492653116448610116456120Rat
1590645Ckap2lcytoskeleton associated protein 2-like3116497186116524302Rat
2890Il1ainterleukin 1 alpha3116526601116537055Rat

1 to 20 of 240 rows
1 to 20 of 370 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match
11117D3Wox222123122771586122771798Ratregion
11117D3Wox222123122771586122771840Ratregion
11119D3Wox211673123321035123321202Ratregion
33808D3Mit41713130193298130193489Ratregion
33927D3Mit31473135181358135181505Ratregion
34355D3Mgh151183118275508118275626Ratregion
34411D3Mgh141233118376416118376539Ratregion
11327D3M2Mit281203124122549124122669Ratregion
11499D3Wox231133119183768119183845Ratregion
11499D3Wox231133119183768119183881Ratregion
33608D3Mit141813115638168115638351Ratregion
33668D3Mit13813115638231115638314Ratregion
35210D3Rat161743121848692121848863Ratregion
35333D3Rat141453126854753126854898Ratregion
35493D3Rat131463133466517133466663Ratregion
36826D3Rat121883127162703127162893Ratregion
37612D3Rat1262073120359478120359687Ratregion
37716D3Rat1121833123217730123217913Ratregion
37836D3Rat852203133042352133042572Ratregion
36622D3Rat181283119250446119250574Ratregion
1 to 20 of 370 rows

Flank 1: (D3Mit14)
Rat AssemblyChrPosition (strand)Source
GRCr83136,091,420 - 136,091,601 (+)Marker Load Pipeline
mRatBN7.23115,638,168 - 115,638,351 (+)MAPPER
Rnor_6.03120,917,788 - 120,917,968NCBI
Rnor_5.03129,091,119 - 129,091,299UniSTS
RGSC_v3.43115,996,080 - 115,996,261RGD
RGSC_v3.43115,996,081 - 115,996,261UniSTS
RGSC_v3.13115,901,654 - 115,901,834RGD
Celera3114,468,435 - 114,468,615UniSTS
RH 3.4 Map3992.3UniSTS
RH 3.4 Map3992.3RGD
RH 2.0 Map3679.7RGD
SHRSP x BN Map356.2698RGD
Cytogenetic Map3 RGD
Peak: (D3Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.23130,193,298 - 130,193,489 (+)MAPPER
Rnor_6.03136,876,155 - 136,876,345NCBI
Rnor_5.03143,321,230 - 143,321,420UniSTS
RGSC_v3.43131,188,558 - 131,188,749RGD
RGSC_v3.43131,188,559 - 131,188,749UniSTS
RGSC_v3.13131,094,132 - 131,094,322RGD
RH 3.4 Map31161.8UniSTS
RH 3.4 Map31161.8RGD
RH 2.0 Map3777.9RGD
Cytogenetic Map3q41UniSTS
Flank 2: (D3Mit3)
Rat AssemblyChrPosition (strand)Source
GRCr83155,634,555 - 155,634,702 (+)Marker Load Pipeline
mRatBN7.23135,181,358 - 135,181,505 (+)MAPPER
Rnor_6.03141,971,190 - 141,971,336NCBI
Rnor_5.03148,387,902 - 148,388,048UniSTS
RGSC_v3.43136,401,933 - 136,402,080RGD
RGSC_v3.43136,401,934 - 136,402,080UniSTS
RGSC_v3.13136,307,507 - 136,307,653RGD
Celera3134,036,137 - 134,036,283UniSTS
RH 3.4 Map31093.91UniSTS
RH 3.4 Map31093.91RGD
SHRSP x BN Map364.1499UniSTS
SHRSP x BN Map364.1499RGD
FHH x ACI Map381.3799RGD
Cytogenetic Map3 RGD


1 to 10 of 52 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)353184593115665732Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
1582216Bw65Body weight QTL 656.3body mass (VT:0001259)body weight (CMO:0000012)3102200529115665732Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)329463235118376539Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
1582219Bw63Body weight QTL 633.80.001body mass (VT:0001259)body weight (CMO:0000012)396127817115665732Rat

1 to 10 of 52 rows


Database
Acc Id
Source(s)
NCBI Gene Insglur1

Note Type Note Reference