Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Siglec1 (sialic acid binding Ig like lectin 1) Rattus norvegicus
Analyze
Symbol: Siglec1
Name: sialic acid binding Ig like lectin 1
RGD ID: 1311953
Description: Predicted to have virion binding activity. Predicted to be involved in clathrin-dependent endocytosis of virus by host cell; negative regulation of phagocytosis; and positive regulation of apoptotic process. Predicted to localize to cytoplasmic vesicle and plasma membrane. Orthologous to human SIGLEC1 (sialic acid binding Ig like lectin 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: sialic acid binding Ig-like lectin 1, sialoadhesin; sialoadhesin; Sn
Orthologs:
Homo sapiens (human) : SIGLEC1 (sialic acid binding Ig like lectin 1)  HGNC  Alliance
Mus musculus (house mouse) : Siglec1 (sialic acid binding Ig-like lectin 1, sialoadhesin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Siglec1 (sialic acid binding Ig like lectin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SIGLEC1 (sialic acid binding Ig like lectin 1)
Canis lupus familiaris (dog) : SIGLEC1 (sialic acid binding Ig like lectin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Siglec1 (sialic acid binding Ig like lectin 1)
Sus scrofa (pig) : SIGLEC1 (sialic acid binding Ig like lectin 1)
Chlorocebus sabaeus (African green monkey) : SIGLEC1 (sialic acid binding Ig like lectin 1)
Heterocephalus glaber (naked mole-rat) : Siglec1 (sialic acid binding Ig like lectin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03123,612,067 - 123,631,718 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3123,612,067 - 123,631,109 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03130,111,340 - 130,130,084 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43118,769,404 - 118,787,908 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13118,676,987 - 118,692,769 (-)NCBI
Celera3117,098,468 - 117,117,016 (-)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Siglec1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311953
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.