Tasp1 (taspase 1) - Rat Genome Database

Name: Tasp1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Tasp1 (taspase 1) Rattus norvegicus

Analyze

Symbol:

Tasp1

Name:

taspase 1

RGD ID:

1308591

Description:

Predicted to enable asparaginase activity; identical protein binding activity; and threonine-type peptidase activity. Predicted to be involved in positive regulation of DNA-templated transcription; protein maturation; and proteolysis. Predicted to be active in cytoplasm. Orthologous to human TASP1 (taspase 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC311468; MGC125209; RGD1308591; similar to 4930485D02Rik protein; taspase, threonine aspartase 1; threonine aspartase 1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TASP1 (taspase 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Tasp1 (taspase, threonine aspartase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tasp1 (taspase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TASP1 (taspase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TASP1 (taspase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tasp1 (taspase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TASP1 (taspase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TASP1 (taspase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tasp1 (taspase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TASP1 (taspase 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tasp1 (taspase, threonine aspartase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tasp1 (taspase, threonine aspartase, 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	tasp-1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Tasp1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tasp1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)

Allele / Splice:

Tasp1^{Tn(sb-T2/Bart3)2.219Mcwi}

Genetic Models:

F344-Tasp1^{Tn(sb-T2/Bart3)2.219Mcwi}

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	127,176,692 - 127,399,600 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	131,032,864 - 131,255,561 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	139,616,956 - 139,839,650 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	137,320,092 - 137,542,788 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	132,888,785 - 133,131,213 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	132,888,772 - 133,131,192 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	139,347,611 - 139,588,372 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	128,002,479 - 128,228,127 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	127,907,732 - 128,133,709 (-)	NCBI
Celera	3	125,825,868 - 126,047,420 (-)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Developmental Disabilities (ISO)

genetic disease (ISO)

Multiple Abnormalities (ISO)

SULEIMAN-EL-HATTAB SYNDROME (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

amitrole (EXP)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

cobalt dichloride (EXP)

corosolic acid (ISO)

crocidolite asbestos (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

folic acid (ISO)

hydrogen peroxide (ISO)

methapyrilene (EXP)

methimazole (EXP)

nickel sulfate (ISO)

ozone (ISO)

phenobarbital (ISO)

phorbol 13-acetate 12-myristate (ISO)

potassium chromate (ISO)

SB 431542 (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

Soman (EXP)

sunitinib (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

torcetrapib (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

positive regulation of DNA-templated transcription (ISO)

protein maturation (IBA)

proteolysis (ISO)

Cellular Component

cytoplasm (IBA)

Molecular Function

asparaginase activity (IBA)

beta-aspartyl-peptidase activity (IBA)

identical protein binding (ISO)

threonine-type endopeptidase activity (IBA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:12477932	PMID:14636557	PMID:16216576	PMID:22829979

Genomics

Comparative Map Data

Tasp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	127,176,692 - 127,399,600 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	131,032,864 - 131,255,561 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	139,616,956 - 139,839,650 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	137,320,092 - 137,542,788 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	132,888,785 - 133,131,213 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	132,888,772 - 133,131,192 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	139,347,611 - 139,588,372 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	128,002,479 - 128,228,127 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	127,907,732 - 128,133,709 (-)	NCBI
Celera	3	125,825,868 - 126,047,420 (-)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

TASP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	13,104,772 - 13,638,932 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	13,389,392 - 13,638,932 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	13,370,041 - 13,619,579 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	13,318,036 - 13,567,583 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	13,318,038 - 13,558,799	NCBI
Celera	20	13,440,107 - 13,689,648 (-)	NCBI		Celera
Cytogenetic Map	20	p12.1	NCBI
HuRef	20	13,324,503 - 13,574,057 (-)	NCBI		HuRef
CHM1_1	20	13,370,132 - 13,618,116 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	13,148,109 - 13,682,349 (-)	NCBI		T2T-CHM13v2.0

Tasp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	139,675,399 - 139,908,767 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	139,675,400 - 139,908,725 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	139,833,479 - 140,066,847 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	139,833,480 - 140,066,805 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	139,659,216 - 139,892,521 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	139,525,027 - 139,758,201 (-)	NCBI		MGSCv36	mm8
Celera	2	141,009,953 - 141,252,432 (-)	NCBI		Celera
Cytogenetic Map	2	F3	NCBI
cM Map	2	69.2	NCBI

Tasp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	22,855,822 - 23,091,732 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	22,856,382 - 23,091,732 (-)	NCBI	ChiLan1.0	ChiLan1.0

TASP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	20	14,274,800 - 14,524,549 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	13,350,135 - 13,599,861 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	13,335,443 - 13,584,376 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	13,335,443 - 13,584,378 (-)	Ensembl	panpan1.1		panPan2

TASP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	9,001,175 - 9,314,212 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	9,001,246 - 9,324,695 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	8,813,171 - 9,126,408 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	9,414,188 - 9,728,318 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	9,414,289 - 9,738,817 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	9,013,582 - 9,338,011 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	9,109,971 - 9,423,426 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	9,458,664 - 9,772,420 (+)	NCBI		UU_Cfam_GSD_1.0

Tasp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	157,732,386 - 158,028,997 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936485	6,163,809 - 6,460,360 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936485	6,163,809 - 6,460,361 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TASP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	22,083,819 - 22,357,476 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	21,963,369 - 22,358,444 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	24,534,792 - 24,918,068 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TASP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	42,284,264 - 42,529,551 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	42,283,687 - 42,529,488 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	2,556,617 - 2,806,243 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tasp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	14,352,360 - 14,633,373 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	14,341,076 - 14,633,441 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tasp1
729 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	78
Count of miRNA genes:	66
Interacting mature miRNAs:	76
Transcripts:	ENSRNOT00000055630
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	38192233	133483320	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	47233211	147415807	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	78196190	146592722	Rat
631649	Bp123	Blood pressure QTL 123	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	89772419	134772419	Rat
8694437	Bw167	Body weight QTL 167	22.46	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	3	91797474	136797474	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	94856903	159898684	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	95735366	140735366	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	97084464	142084464	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	97551417	147415807	Rat
2312659	Slep7	Serum leptin concentration QTL 7		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	3	98535255	168026850	Rat
2312670	Bw94	Body weight QTL 94		0.01	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	3	98535255	168026850	Rat
2312673	Scl63	Serum cholesterol level QTL 63		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	98535255	168026850	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	98535386	161695835	Rat
619618	Rf3	Renal disease susceptibility QTL 3	6.5	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate to body weight ratio (CMO:0001270)	3	107693393	152693393	Rat
1331758	Bp207	Blood pressure QTL 207	2.848		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	112287552	135181505	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	112681431	157681431	Rat
1358204	Insglur1	Insulin/glucose ratio QTL 1	3.8		blood glucose amount (VT:0000188)	serum insulin level (CMO:0000358)	3	115638168	135181505	Rat
1358204	Insglur1	Insulin/glucose ratio QTL 1	3.8		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	3	115638168	135181505	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	118839124	163839124	Rat
1598877	Bp285	Blood pressure QTL 285	1.5	0.03	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	120538241	165538241	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	121056165	145956249	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	121056165	157309487	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	122438700	167438700	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	124122556	169034231	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	127162703	168026850	Rat

Markers in Region

RH140780

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	127,201,445 - 127,201,649 (+)	MAPPER	mRatBN7.2
mRatBN7.2	12	32,662,676 - 32,662,858 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	38,095,882 - 38,096,063	NCBI	Rnor6.0
Rnor_6.0	3	132,913,832 - 132,914,035	NCBI	Rnor6.0
Rnor_5.0	12	39,967,088 - 39,967,269	UniSTS	Rnor5.0
Rnor_5.0	3	139,372,508 - 139,372,711	UniSTS	Rnor5.0
RGSC_v3.4	3	128,028,504 - 128,028,707	UniSTS	RGSC3.4
RGSC_v3.4	12	33,797,460 - 33,797,641	UniSTS	RGSC3.4
Celera	12	34,350,265 - 34,350,446	UniSTS
Celera	3	125,849,602 - 125,849,805	UniSTS
RH 3.4 Map	12	574.12	UniSTS
Cytogenetic Map	3	q36-q41	UniSTS
Cytogenetic Map	12	q15	UniSTS

AI396692

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	127,382,918 - 127,383,651 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	133,106,044 - 133,106,776	NCBI	Rnor6.0
Rnor_5.0	3	139,563,633 - 139,564,365	UniSTS	Rnor5.0
RGSC_v3.4	3	128,211,460 - 128,212,192	UniSTS	RGSC3.4
Celera	3	126,030,852 - 126,031,584	UniSTS
Cytogenetic Map	3	q36-q41	UniSTS

Genetic Models

This gene Tasp1 is modified in the following models/strains:

F344-Tasp1^{Tn(sb-T2/Bart3)2.219Mcwi}

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium									20		5
Low	3	43	57	41	19	41	8	11	54	35	36	11	8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001044243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC105618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000055630 ⟹ ENSRNOP00000052492

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	127,176,692 - 127,399,600 (-)	Ensembl
Rnor_6.0 Ensembl	3	132,888,772 - 133,131,192 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000083637 ⟹ ENSRNOP00000075239

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	127,176,692 - 127,399,600 (-)	Ensembl
Rnor_6.0 Ensembl	3	132,889,661 - 133,122,691 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000100555 ⟹ ENSRNOP00000084563

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	127,176,692 - 127,399,600 (-)	Ensembl

RefSeq Acc Id:

NM_001044243 ⟹ NP_001037708

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,690 - 127,399,600 (-)	NCBI
Rnor_6.0	3	132,889,059 - 133,122,755 (-)	NCBI
Rnor_5.0	3	139,347,611 - 139,588,372 (-)	NCBI
RGSC_v3.4	3	128,002,479 - 128,228,127 (-)	RGD
Celera	3	125,825,868 - 126,047,420 (-)	RGD

Sequence:

show sequence

CTTTTGCAGTTTCTTTTGCATGGAAGGATGCTTTTTTCCTGATAGAAGATGATAATCTTGGAGA
ATGATCATGGAGAAGGGGATGAATTCTGGAGAAGGACTGCCTTCCAGATCCTCTCAGGCATCTG
CTGCTAAAATAACAGTCAAGGAGTTAGAAACACAGCAGCCCTGTAAGGAGAAACGAGGGGGCTT
TGTGCTGGTGCATGCAGGTGCAGGCTATCATTCTGAATCCAAAGCCAAGGAGTATAAACATGTA
TGCAAACGAGCTTGTCAGAAGGCAATTGAGAAGCTACAGGCTGGTGCCCTTGCGACAGATGCAG
TGATGGCTGCTCTGGTGGAACTTGAGGATTCTCCTTTTACAAATGCAGGAGTTGGATCTAATCT
AAATCTCTTAGGAGAGATCGAATGTGATGCCAGCATAATGGATGGGAAGTCCTTAAGCTTCGGA
GCCGTAGGAGCACTGAGTGGAATCAAGAATCCAGTATCAGTTGCACACAGACTCTTGTGTGAAG
GGCAGAAGGGCAAGCTGTCTGCAGGCCGGATTCCTCCTTGCTTTTTAGTTGGAGAAGGAGCCTA
CAGATGGGCAGTGGATCATGGGATACCCTCTTGCCCTCCTAGCACCATGACCACAAGATTCAGC
TTAGCTGCATTTAAAAGGAACAAGAGGAAACTAGAGCTGGCAGAAAGGGTGGAAACAGACTTCA
TCCAGCTAAAGAGAAGAAGACAATCAAGTGCAAAGGAAAATGACTCGGGCGCTTTGGACACAGT
GGGTGCTGTGGTTGTCGATCATGAAGGGAATGTTGCTGCTGCTGTCTCCAGTGGAGGCTTGGCC
TTGAAACATCCAGGGAGAGTTGGGCAGGCTGCTCTTTATGGATGTGGCTGCTGGGCTGAAAATA
CTGGAGCTCATAACCCCTACTCCACAGCTGTGAGTACCTCAGGATGTGGAGAGCATCTTGTGCG
CACCATACTGGCTAGAGAATGTTCACACGCTTTACAAGCTGAAGACGCTCACCAAGCTCTGTTG
GAGACTATGCAAAACAAGTTTATCAGTTCACCTTTCCTTGCCAGTGAAGACGGCGTGCTCGGCG
GGGTGATCGTCCTCCGGTCATGCAGATGTCCTTCAGAGTCTGACCCCTCCCAAGATAAACAGAC
ATTGCTCGTGGAATTTCTGTGGAGCCACAGTACAGAGAGCATGTGCGTGGGCTATATGTCAGCC
CAGGATGGCAAAGCCAAGACTCACATTTCCAGACTCCCTCCTGGTGCTGTGGCAGGACAGTCTG
TTGCAATCGAAGGTGGGGTTTGCCGCCTGGAGAGCCCTGTGAACTGACTCCAGGCTGACTACGA
AGTGTCTGCGAGGCATTTCAGAACCTGAGCTTTGGCTGTTCAGTTGAAGTTGGATGTTTTATCT
TCCTTGTTTTGTAATTCTTATTGCAACCTCGGGCACTGCTTGGGACACTTAAGTGCTGCTATAC
TTAGTGCTGGTTGACACTCGAGTCTTAGGCGGATGAGCGGAGCATGTGTGAGTGTGTGTCCGTG
TGCAGTGTGTGTGCTTGCTTCTCCCTGATGGGATAAGATCTCCTCAAGTGTAACCTATGAACGA
GAATGATTAACTCTTTACAAAATGTGTGCTTTAACTGTTTACAAGTAAACCTAAAGTTGTAGAA
AACTTTTATTTCATAAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTGAA
TCTGCTTGTTAAAATGACTTGACTTTGATTGTAGCCCATTTAATCACAGGAATCAATAATCTGG
TGTCAGTTTAAGTGGATGGTGTGGTAACTTAAATGGTTGTTCTCACCCCTCACACAGGGCAATT
TTCTTGAACACAGAGTGGTTTCAGTGAAACCATTCTAGCAGAGAATTAAAGTCAGAACCTTTTA
AAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

hide sequence

RefSeq Acc Id:

XM_017591759 ⟹ XP_017447248

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,407,938 (-)	NCBI
Rnor_6.0	3	132,888,785 - 133,131,139 (-)	NCBI

Sequence:

show sequence

GTCCCTCGTTCTCACGCTGTCCGCGTCGCCGCTGCCTAGCCTCGGTCTCCGTATGGTCCCGCAG
GCCCGCGTGGCGTCCTCTCCTCACCGCACGGGACGGCGCGTATGGCGCCGCCTGCCTAGCCGGG
CGCAGGGGTCCACGGATTCCCGGGTCCTGAATCGCGGTCACGCGTGGGCCCGCCAGTTTCCTTG
GCTGTGGAGTTCTCGTAGCGCTTCGCGCGCTGTTCAGTCCCAGGCTACAGGGAACTCCCGCCCC
CCAGGGTGACTCCTTTTGCAGTTTCTTTTGCATGGAAGGATGCTTTTTTCCTGATAGAAGATGA
TAATCTTGGAGAATGATCATGGAGAAGGGGATGAATTCTGGAGAAGGACTGCCTTCCAGATCCT
CTCAGGCATCTGCTGCTAAAATAACAGTCAAGGAGTTAGAAACACAGCAGCCCTGTAAGGAGAA
ACGAGGGGGCTTTGTGCTGGTGCATGCAGGTGCAGGCTATCATTCTGAATCCAAAGCCAAGGAG
TATAAACATGTATGCAAACGAGCTTGTCAGAAGGCAATTGAGAAGCTACAGGCTGGTGCCCTTG
CGACAGATGCAGTGATGGCTGCTCTGGTGGAACTTGAGCATCTGTCAGCACTATATCCTCTTTT
GGAGGCCTACCTAGTCAGCATTGTTCTTGATTCTCCTTTTACAAATGCAGGAGTTGGATCTAAT
CTAAATCTCTTAGGAGAGATCGAATGTGATGCCAGCATAATGGATGGGAAGTCCTTAAGCTTCG
GAGCCGTAGGAGCACTGAGTGGAATCAAGAATCCAGTATCAGTTGCACACAGACTCTTGTGTGA
AGGGCAGAAGGGCAAGCTGTCTGCAGGCCGGATTCCTCCTTGCTTTTTAGTTGGAGAAGGAGCC
TACAGATGGGCAGTGGATCATGGGATACCCTCTTGCCCTCCTAGCACCATGACCACAAGATTCA
GCTTAGCTGCATTTAAAAGGAACAAGAGGAAACTAGAGCTGGCAGAAAGGGTGGAAACAGACTT
CATCCAGCTAAAGAGAAGAAGACAATCAAGTGCAAAGGAAAATGACTCGGGCGCTTTGGACACA
GTGGGTGCTGTGGTTGTCGATCATGAAGGGAATGTTGCTGCTGCTGTCTCCAGTGGAGGCTTGG
CCTTGAAACATCCAGGGAGAGTTGGGCAGGCTGCTCTTTATGGATGTGGCTGCTGGGCTGAAAA
TACTGGAGCTCATAACCCCTACTCCACAGCTGTGAGTACCTCAGGATGTGGAGAGCATCTTGTG
CGCACCATACTGGCTAGAGAATGTTCACACGCTTTACAAGCTGAAGACGCTCACCAAGCTCTGT
TGGAGACTATGCAAAACAAGTTTATCAGTTCACCTTTCCTTGCCAGTGAAGACGGCGTGCTCGG
CGGGGTGATCGTCCTCCGGTCATGCAGATGTCCTTCAGAGTCTGACCCCTCCCAAGATAAACAG
ACATTGCTCGTGGAATTTCTGTGGAGCCACAGTACAGAGAGCATGTGCGTGGGCTATATGTCAG
CCCAGGATGGCAAAGCCAAGACTCACATTTCCAGACTCCCTCCTGGTGCTGTGGCAGGACAGTC
TGTTGCAATCGAAGGTGGGGTTTGCCGCCTGGAGAGCCCTGTGAACTGACTCCAGGCTGACTAC
GAAGTGTCTGCGAGGCATTTCAGAACCTGAGCTTTGGCTGTTCAGTTGAAGTTGGATGTTTTAT
CTTCCTTGTTTTGTAATTCTTATTGCAACCTCGGGCACTGCTTGGGACACTTAAGTGCTGCTAT
ACTTAGTGCTGGTTGACACTCGAGTCTTAGGCGGATGAGCGGAGCATGTGTGAGTGTGTGTCCG
TGTGCAGTGTGTGTGCTTGCTTCTCCCTGATGGGATAAGATCTCCTCAAGTGTAACCTATGAAC
GAGAATGATTAACTCTTTACAAAATGTGTGCTTTAACTGTTTACAAGTAAACCTAAAGTTGTAG
AAAACTTTTATTTCATAAAGAGGTACCAACTATGGTTGATACAATGTGTCTGAACTGAAGAGTG
AATCTGCTTGTTAAAATGACTTGACTTTGATTGTAGCCCATTTAATCACAGGAATCAATAATCT
GGTGTCAGTTTAAGTGGATGGTGTGGTAACTTAAATGGTTGTTCTCACCCCTCACACAGGGCAA
TTTTCTTGAACACAGAGTGGTTTCAGTGAAACCATTCTAGCAGAGAATTAAAGTCAGAACCTTT
TAAAGTAATGGTCTTATTGATAAAGTTTGTGCTTCTTTCCTGAGCTATTTGAAGCTTAAGTATC
GCATAGCTTCGCGCCGTGTGTAGTATATTATGAGAGAATATGTAAAGAGAGTGTTCAGTAACAC
ACAGTTTTAATTTGTGTATAATGGAATGTTATTTACAATGTAACACTGTAAATAAGAAAGCAAA
GTTTATGGGAAAATTCAATATTATCTTTGTTTCTTGTTTAAATATATTTTTAAGATAAAGGTAC
AAAAATAAAAGAAGCATATTACTGGG

hide sequence

RefSeq Acc Id:

XM_039105020 ⟹ XP_038960948

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI

RefSeq Acc Id:

XM_039105021 ⟹ XP_038960949

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI

RefSeq Acc Id:

XM_039105022 ⟹ XP_038960950

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI

RefSeq Acc Id:

XM_039105023 ⟹ XP_038960951

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI

RefSeq Acc Id:

XM_039105024 ⟹ XP_038960952

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI

RefSeq Acc Id:

XM_039105025 ⟹ XP_038960953

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,407,938 (-)	NCBI

RefSeq Acc Id:

XM_039105026 ⟹ XP_038960954

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,408,038 (-)	NCBI

RefSeq Acc Id:

XM_039105027 ⟹ XP_038960955

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,390,849 (-)	NCBI

RefSeq Acc Id:

XM_039105028 ⟹ XP_038960956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,333,515 (-)	NCBI

RefSeq Acc Id:

XR_005501886

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI

RefSeq Acc Id:

XR_005501887

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	127,176,416 - 127,408,039 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001037708	(Get FASTA)	NCBI Sequence Viewer
	XP_017447248	(Get FASTA)	NCBI Sequence Viewer
	XP_038960948	(Get FASTA)	NCBI Sequence Viewer
	XP_038960949	(Get FASTA)	NCBI Sequence Viewer
	XP_038960950	(Get FASTA)	NCBI Sequence Viewer
	XP_038960951	(Get FASTA)	NCBI Sequence Viewer
	XP_038960952	(Get FASTA)	NCBI Sequence Viewer
	XP_038960953	(Get FASTA)	NCBI Sequence Viewer
	XP_038960954	(Get FASTA)	NCBI Sequence Viewer
	XP_038960955	(Get FASTA)	NCBI Sequence Viewer
	XP_038960956	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI05619	(Get FASTA)	NCBI Sequence Viewer
	EDL80319	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000052492
	ENSRNOP00000052492.2
	ENSRNOP00000075239
	ENSRNOP00000075239.2
	ENSRNOP00000084563.1

RefSeq Acc Id:

NP_001037708 ⟸ NM_001044243

- UniProtKB:

Q0VGK5 (UniProtKB/TrEMBL), A6HQL8 (UniProtKB/TrEMBL), A0A8I5ZZW5 (UniProtKB/TrEMBL), F7F9N0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MIMEKGMNSGEGLPSRSSQASAAKITVKELETQQPCKEKRGGFVLVHAGAGYHSESKAKEYKHV
CKRACQKAIEKLQAGALATDAVMAALVELEDSPFTNAGVGSNLNLLGEIECDASIMDGKSLSFG
AVGALSGIKNPVSVAHRLLCEGQKGKLSAGRIPPCFLVGEGAYRWAVDHGIPSCPPSTMTTRFS
LAAFKRNKRKLELAERVETDFIQLKRRRQSSAKENDSGALDTVGAVVVDHEGNVAAAVSSGGLA
LKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHALQAEDAHQALL
ETMQNKFISSPFLASEDGVLGGVIVLRSCRCPSESDPSQDKQTLLVEFLWSHSTESMCVGYMSA
QDGKAKTHISRLPPGAVAGQSVAIEGGVCRLESPVN

hide sequence

RefSeq Acc Id:	XP_017447248 ⟸ XM_017591759
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZW5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIMEKGMNSGEGLPSRSSQASAAKITVKELETQQPCKEKRGGFVLVHAGAGYHSESKAKEYKHV CKRACQKAIEKLQAGALATDAVMAALVELEHLSALYPLLEAYLVSIVLDSPFTNAGVGSNLNLL GEIECDASIMDGKSLSFGAVGALSGIKNPVSVAHRLLCEGQKGKLSAGRIPPCFLVGEGAYRWA VDHGIPSCPPSTMTTRFSLAAFKRNKRKLELAERVETDFIQLKRRRQSSAKENDSGALDTVGAV VVDHEGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTIL ARECSHALQAEDAHQALLETMQNKFISSPFLASEDGVLGGVIVLRSCRCPSESDPSQDKQTLLV EFLWSHSTESMCVGYMSAQDGKAKTHISRLPPGAVAGQSVAIEGGVCRLESPVN hide sequence

RefSeq Acc Id:

ENSRNOP00000052492 ⟸ ENSRNOT00000055630

RefSeq Acc Id:

ENSRNOP00000075239 ⟸ ENSRNOT00000083637

RefSeq Acc Id:	XP_038960952 ⟸ XM_039105024
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2KA32 (UniProtKB/TrEMBL), A0A8I5ZZW5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960949 ⟸ XM_039105021
- Peptide Label:	isoform X2
- UniProtKB:	Q0VGK5 (UniProtKB/TrEMBL), A6HQL8 (UniProtKB/TrEMBL), A0A8I5ZZW5 (UniProtKB/TrEMBL), F7F9N0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960951 ⟸ XM_039105023
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZZW5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960950 ⟸ XM_039105022
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZZW5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960948 ⟸ XM_039105020
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZW5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960954 ⟸ XM_039105026
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZZW5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960953 ⟸ XM_039105025
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZZW5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960955 ⟸ XM_039105027
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038960956 ⟸ XM_039105028
- Peptide Label:	isoform X9

RefSeq Acc Id:

ENSRNOP00000084563 ⟸ ENSRNOT00000100555

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q0VGK5-F1-model_v2	AlphaFold	Q0VGK5	1-420	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692469

Promoter ID:

EPDNEW_R2994

Type:

multiple initiation site

Name:

Tasp1_1

Description:

taspase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	133,131,175 - 133,131,235	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308591	AgrOrtholog
BioCyc Gene	G2FUF-47667	BioCyc
Ensembl Genes	ENSRNOG00000004493	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000055630	ENTREZGENE
	ENSRNOT00000055630.4	UniProtKB/TrEMBL
	ENSRNOT00000083637	ENTREZGENE
	ENSRNOT00000083637.2	UniProtKB/TrEMBL
	ENSRNOT00000100555.1	UniProtKB/TrEMBL
Gene3D-CATH	(Glycosyl)asparaginase	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7453153	IMAGE-MGC_LOAD
InterPro	Ntn_hydrolases_N	UniProtKB/TrEMBL
	Peptidase_T2	UniProtKB/TrEMBL
	Taspase1	UniProtKB/TrEMBL
KEGG Report	rno:311468	UniProtKB/TrEMBL
MGC_CLONE	MGC:125209	IMAGE-MGC_LOAD
NCBI Gene	311468	ENTREZGENE
PANTHER	Peptidase_T2	UniProtKB/TrEMBL
	THREONINE ASPARTASE 1	UniProtKB/TrEMBL
Pfam	Asparaginase_2	UniProtKB/TrEMBL
PhenoGen	Tasp1	PhenoGen
RatGTEx	ENSRNOG00000004493	RatGTEx
Superfamily-SCOP	SSF56235	UniProtKB/TrEMBL
UniProt	A0A0G2KA32	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZZW5	ENTREZGENE, UniProtKB/TrEMBL
	A6HQL8	ENTREZGENE, UniProtKB/TrEMBL
	F7F9N0	ENTREZGENE, UniProtKB/TrEMBL
	Q0VGK5	ENTREZGENE
UniProt Secondary	Q0VGK5	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Tasp1	taspase, threonine aspartase 1	Tasp1_predicted	taspase, threonine aspartase 1 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Tasp1_predicted	taspase, threonine aspartase 1 (predicted)	RGD1308591_predicted	similar to 4930485D02Rik protein (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1308591_predicted	similar to 4930485D02Rik protein (predicted)	LOC311468_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC311468_predicted	similar to 4930485D02Rik protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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