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Gene: Nop56 (NOP56 ribonucleoprotein) Rattus norvegicus
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Symbol: Nop56
Name: NOP56 ribonucleoprotein
Description: Predicted to have histone methyltransferase binding activity and snoRNA binding activity. Predicted to localize to the nucleolus; pre-snoRNP complex; and small-subunit processome. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 36. Orthologous to human NOP56 (NOP56 ribonucleoprotein); PARTICIPATES IN ribosome biogenesis pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC362214; MGC116301; Nol5a; NOP56 ribonucleoprotein homolog; NOP56 ribonucleoprotein homolog (yeast); nucleolar protein 56; nucleolar protein 5A
Orthologs:
Homo sapiens (human) : NOP56 (NOP56 ribonucleoprotein)  HGNC  Alliance
Mus musculus (house mouse) : Nop56 (NOP56 ribonucleoprotein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nop56 (NOP56 ribonucleoprotein)
Pan paniscus (bonobo/pygmy chimpanzee) : NOP56 (NOP56 ribonucleoprotein)
Canis lupus familiaris (dog) : NOP56 (NOP56 ribonucleoprotein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nop56 (NOP56 ribonucleoprotein)
Sus scrofa (pig) : NOP56 (NOP56 ribonucleoprotein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03122,803,726 - 122,808,564 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3122,803,772 - 122,808,558 (+)Ensembl
Rnor_5.03129,303,444 - 129,308,279 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43117,887,822 - 117,892,614 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13117,793,394 - 117,798,187 (+)NCBI
Celera3116,293,358 - 116,298,150 (+)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nop56
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308892
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.