Gene: Fastkd5 (FAST kinase domains 5) Rattus norvegicus
Analyze
Symbol: Fastkd5
Name: FAST kinase domains 5
Description: Predicted to have rRNA binding activity; predicted to be involved in mitochondrial RNA processing; predicted to localize to the mitochondrial nucleoid and ribonucleoprotein granule; orthologous to human FASTKD5 (FAST kinase domains 5); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: MODEL
Also known as: FAST kinase domains 5, pseudogene 1; Fastkd5-ps1; LOC366192; LOW QUALITY PROTEIN: FAST kinase domain-containing protein 5, mitochondrial; RGD1563839; similar to hypothetical protein FLJ13149
Orthologs:
Homo sapiens (human) : FASTKD5 (FAST kinase domains 5)  HGNC  Alliance
Mus musculus (house mouse) : Fastkd5 (FAST kinase domains 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fastkd5 (FAST kinase domains 5)
Pan paniscus (bonobo/pygmy chimpanzee) : FASTKD5 (FAST kinase domains 5)
Canis lupus familiaris (dog) : FASTKD5 (FAST kinase domains 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fastkd5 (FAST kinase domains 5)
Sus scrofa (pig) : FASTKD5 (FAST kinase domains 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03123,154,263 - 123,170,615 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03129,652,391 - 129,669,888 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43118,241,786 - 118,244,753 (-)NCBIRGSC3.4rn4RGSC3.4
Celera3116,641,095 - 116,657,318 (-)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Fastkd5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563839
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.