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Gene: Clec4e (C-type lectin domain family 4, member E) Rattus norvegicus
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Symbol: Clec4e
Name: C-type lectin domain family 4, member E
Description: Predicted to have calcium ion binding activity and pattern recognition receptor activity. Predicted to be involved in several processes, including T cell differentiation involved in immune response; defense response to other organism; and immune response-regulating signaling pathway. Predicted to localize to the membrane. Orthologous to human CLEC4E (C-type lectin domain family 4 member E); PARTICIPATES IN tuberculosis pathway; INTERACTS WITH (RS)-amphetamine; 17beta-estradiol; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-type lectin domain family 4 member E; C-type lectin superfamily member 9; Clecsf9; immunoreceptor; macrophage-inducible C-type lectin; mincle
Orthologs:
Homo sapiens (human) : CLEC4E (C-type lectin domain family 4 member E)  HGNC  Alliance
Mus musculus (house mouse) : Clec4e (C-type lectin domain family 4, member e)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clec4e (C-type lectin domain family 4 member E)
Pan paniscus (bonobo/pygmy chimpanzee) : CLEC4E (C-type lectin domain family 4 member E)
Canis lupus familiaris (dog) : LOC611538 (C-type lectin domain family 4 member E)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clec4e (C-type lectin domain family 4 member E)
Sus scrofa (pig) : CLEC4E (C-type lectin domain family 4 member E)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04156,271,087 - 156,276,243 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04223,287,319 - 223,293,143 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44159,901,953 - 159,907,090 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14160,146,888 - 160,152,042 (-)NCBI
Celera4145,397,723 - 145,402,880 (-)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Clec4e
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359298
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.