Gene: Clcf1 (cardiotrophin-like cytokine factor 1) Rattus norvegicus
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Symbol: Clcf1
Name: cardiotrophin-like cytokine factor 1
Description: ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cell surface receptor signaling pathway (ortholog); JAK-STAT cascade (ortholog); PARTICIPATES IN cytokine mediated signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH cold-induced sweating syndrome 2 (ortholog); Crisponi syndrome (ortholog); FOUND IN CNTFR-CLCF1 complex (ortholog); CRLF-CLCF1 complex (ortholog); extracellular region (ortholog); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: B-cell stimulating factor 3; Bsf3; cardiotrophin-like cytokine; Clc; LOC365395; MGC112574; NNT-1; novel neurotrophin-1
Orthologs:
Homo sapiens (human) : CLCF1 (cardiotrophin like cytokine factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Clcf1 (cardiotrophin-like cytokine factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clcf1 (cardiotrophin like cytokine factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CLCF1 (cardiotrophin like cytokine factor 1)
Canis lupus familiaris (dog) : CLCF1 (cardiotrophin like cytokine factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clcf1 (cardiotrophin like cytokine factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01219,468,866 - 219,472,445 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01226,338,540 - 226,342,119 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41206,802,745 - 206,806,332 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11206,956,450 - 206,958,891 (+)NCBI
Celera1199,058,438 - 199,062,024 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clcf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303171
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2018-04-10
Status: ACTIVE