Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Slc46a2 (solute carrier family 46, member 2) Rattus norvegicus
Analyze
Symbol: Slc46a2
Name: solute carrier family 46, member 2
Description: Predicted to have transmembrane transporter activity. Predicted to be involved in several processes, including negative regulation of T cell apoptotic process; positive regulation of nucleotide-binding activity oligomerization domain containing 1 signaling pathway; and thymus development. Predicted to localize to the cell surface. Orthologous to human SLC46A2 (solute carrier family 46 member 2); INTERACTS WITH bisphenol A; copper atom; copper(0).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC298034; thymic stromal cotransporter; thymic stromal cotransporter homolog; Tscot
Orthologs:
Homo sapiens (human) : SLC46A2 (solute carrier family 46 member 2)  HGNC  Alliance
Mus musculus (house mouse) : Slc46a2 (solute carrier family 46, member 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc46a2 (solute carrier family 46 member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC46A2 (solute carrier family 46 member 2)
Canis lupus familiaris (dog) : SLC46A2 (solute carrier family 46 member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc46a2 (solute carrier family 46 member 2)
Sus scrofa (pig) : SLC46A2 (solute carrier family 46 member 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0577,165,463 - 77,174,177 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl577,165,598 - 77,173,502 (-)Ensembl
Rnor_5.0581,300,022 - 81,307,920 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4578,044,714 - 78,052,612 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1578,043,262 - 78,057,672 (-)NCBI
Celera573,609,789 - 73,617,699 (-)NCBICelera
Cytogenetic Map5q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc46a2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310485
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.