Adam8 (ADAM metallopeptidase domain 8) - Rat Genome Database

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Gene: Adam8 (ADAM metallopeptidase domain 8) Rattus norvegicus
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Symbol: Adam8
Name: ADAM metallopeptidase domain 8
RGD ID: 1566394
Description: Predicted to enable several functions, including metal ion binding activity; metalloendopeptidase activity; and signaling receptor binding activity. Predicted to be involved in several processes, including positive regulation of defense response; positive regulation of intracellular signal transduction; and positive regulation of leukocyte migration. Predicted to act upstream of or within cell-cell adhesion. Predicted to be located in several cellular components, including cell surface; cytoplasmic vesicle; and podosome. Predicted to be part of alpha9-beta1 integrin-ADAM8 complex. Orthologous to human ADAM8 (ADAM metallopeptidase domain 8); INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: a disintegrin and metallopeptidase domain 8; disintegrin and metalloproteinase domain-containing protein 8; LOC499285; RGD1566394; similar to cysteine-rich glycoprotein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81204,206,206 - 204,218,988 (-)NCBIGRCr8
mRatBN7.21194,776,559 - 194,789,330 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1194,770,060 - 194,788,801 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01212,317,510 - 212,332,895 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,317,848 - 212,330,349 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01219,236,436 - 219,251,059 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41199,780,772 - 199,791,855 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1192,454,105 - 192,468,808 (-)NCBICelera
Cytogenetic Map1q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
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Original Reference(s)
Adam8Ratasthma  ISOAdam8 (Mus musculus)5128878mRNA:increased expression:respiratory tractRGD 
Adam8Ratasthma severityISOADAM8 (Homo sapiens)4145380mRNA:increased expression:bronchusRGD 
Adam8Ratasthma  ISOAdam8 (Mus musculus)5128872 RGD 
Adam8RatExperimental Autoimmune Encephalomyelitis  ISOAdam8 (Mus musculus)2325244 RGD 
Adam8RatExperimental Autoimmune Neuritis  ISOAdam8 (Mus musculus)2325244 RGD 
Adam8Ratpancreatic ductal carcinoma disease_progressionISOADAM8 (Homo sapiens)2325243mRNA:increased expression:pancreasRGD 
Adam8Ratpulmonary eosinophilia  ISOADAM8 (Homo sapiens)5128874protein:increased expression:serumRGD 
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Original Reference(s)
Adam8Ratdistal 10q deletion syndrome  ISOADAM8 (Homo sapiens)8554872ClinVar Annotator: match by term: Distal 10q deletion syndromeClinVarPMID:31690835
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Original Reference(s)
Adam8RatChemical and Drug Induced Liver Injury  ISOADAM8 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:24646716

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Original Reference(s)
Adam8Rat(1->4)-beta-D-glucan multiple interactionsISOAdam8 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of ADAM8 mRNACTDPMID:36331819
Adam8Rat1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene multiple interactionsISOAdam8 (Mus musculus)6480464[2 more ...CTDPMID:25510870
Adam8Rat1,2-dimethylhydrazine increases expressionEXP 64804641 and 2-Dimethylhydrazine results in increased expression of ADAM8 mRNACTDPMID:27840820
Adam8Rat1,2-dimethylhydrazine increases expressionISOAdam8 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of ADAM8 mRNACTDPMID:22206623
Adam8Rat1-naphthyl isothiocyanate increases expressionEXP 64804641-Naphthylisothiocyanate results in increased expression of ADAM8 mRNACTDPMID:30723492
Adam8Rat17alpha-ethynylestradiol increases expressionISOAdam8 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of ADAM8 mRNACTDPMID:17942748
Adam8Rat17alpha-ethynylestradiol multiple interactionsISOAdam8 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ADAM8 mRNACTDPMID:17942748
Adam8Rat17beta-estradiol multiple interactionsISOAdam8 (Mus musculus)6480464[Polyphenols co-treated with Estradiol] results in increased expression of ADAM8 mRNACTDPMID:30077407
Adam8Rat17beta-estradiol multiple interactionsISOADAM8 (Homo sapiens)6480464[Estradiol co-treated with TGFB1 protein] results in decreased expression of ADAM8 mRNACTDPMID:30165855
Adam8Rat17beta-estradiol increases expressionISOAdam8 (Mus musculus)6480464Estradiol results in increased expression of ADAM8 mRNACTDPMID:30077407
Adam8Rat2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOAdam8 (Mus musculus)6480464[2 more ...CTDPMID:25510870
Adam8Rat2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOAdam8 (Mus musculus)6480464[2 more ...CTDPMID:25510870
Adam8Rat2,2',5,5'-tetrachlorobiphenyl decreases expressionISOADAM8 (Homo sapiens)64804642 more ...CTDPMID:36804509
Adam8Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOAdam8 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ADAM8 mRNACTDPMID:17942748
Adam8Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of ADAM8 mRNACTDPMID:33387578
Adam8Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ADAM8 mRNACTDPMID:34747641
Adam8Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOAdam8 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of ADAM8 mRNACTDPMID:29673856
Adam8Rat2,4,4'-trichlorobiphenyl multiple interactionsISOAdam8 (Mus musculus)6480464[2 more ...CTDPMID:25510870
Adam8Rat2,4-diaminotoluene increases expressionISOAdam8 (Mus musculus)64804642 and 4-diaminotoluene results in increased expression of ADAM8 mRNACTDPMID:20713471
Adam8Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOAdam8 (Mus musculus)64804642 more ...CTDPMID:38648751

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Biological Process
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Original Reference(s)
Adam8Ratangiogenesis involved_inISOAdam8 (Mus musculus)1624291 PMID:19003792RGDPMID:19003792
Adam8Ratangiogenesis involved_inIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratbiological_process  ND 159840705/2010: no relevant rat dataRGD 
Adam8Ratcanonical NF-kappaB signal transduction involved_inISOAdam8 (Mus musculus)1624291 PMID:20683884RGDPMID:20683884
Adam8Ratcanonical NF-kappaB signal transduction involved_inIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratcell morphogenesis involved_inISOAdam8 (Mus musculus)1624291 PMID:11341326 and PMID:20683884RGDPMID:11341326 and PMID:20683884
Adam8Ratcell morphogenesis involved_inIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratcell-cell adhesion acts_upstream_of_or_withinIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratcell-cell adhesion acts_upstream_of_or_withinISOAdam8 (Mus musculus)1624291 PMID:12372841RGDPMID:12372841
Adam8Ratcellular response to hypoxia involved_inISOADAM8 (Homo sapiens)1624291 PMID:18566576RGDPMID:18566576
Adam8Ratcellular response to hypoxia involved_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratinflammatory response involved_inISOADAM8 (Homo sapiens)1624291 PMID:12777399 and PMID:17548643RGDPMID:12777399 and PMID:17548643
Adam8Ratinflammatory response involved_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratinflammatory response involved_inIBAMGI:107825 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Adam8Ratleukocyte migration involved in inflammatory response involved_inISOAdam8 (Mus musculus)1624291 PMID:20194813RGDPMID:20194813
Adam8Ratleukocyte migration involved in inflammatory response involved_inIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratlymphocyte chemotaxis involved_inISOAdam8 (Mus musculus)1624291 PMID:20856819RGDPMID:20856819
Adam8Ratlymphocyte chemotaxis involved_inIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratnegative regulation of neuron apoptotic process involved_inIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratnegative regulation of neuron apoptotic process involved_inISOAdam8 (Mus musculus)1624291 PMID:14761956RGDPMID:14761956
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Cellular Component
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Original Reference(s)
Adam8Ratalpha9-beta1 integrin-ADAM8 complex part_ofISOAdam8 (Mus musculus)1624291 PMID:16995821RGDPMID:16995821
Adam8Ratalpha9-beta1 integrin-ADAM8 complex part_ofIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratcell surface located_inISOADAM8 (Homo sapiens)1624291 PMID:17548643RGDPMID:17548643
Adam8Ratcell surface located_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratcytoplasm located_inISOADAM8 (Homo sapiens)1624291 PMID:18397961RGDPMID:18397961
Adam8Ratcytoplasm located_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratdense core granule membrane located_inISOADAM8 (Homo sapiens)1624291 PMID:17548643RGDPMID:17548643
Adam8Ratdense core granule membrane located_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Adam8Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
Adam8Ratphagolysosome located_inISOADAM8 (Homo sapiens)1624291 PMID:17548643RGDPMID:17548643
Adam8Ratphagolysosome located_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratplasma membrane located_inISOAdam8 (Mus musculus)1624291 PMID:12372841RGDPMID:12372841
Adam8Ratplasma membrane located_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratplasma membrane located_inISOADAM8 (Homo sapiens)1624291 PMID:17548643 and PMID:18397961RGDPMID:17548643 and PMID:18397961
Adam8Ratplasma membrane located_inIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratpodosome located_inISOADAM8 (Homo sapiens)1624291 PMID:15220135RGDPMID:15220135
Adam8Ratpodosome located_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratspecific granule located_inISOADAM8 (Homo sapiens)1624291 PMID:17548643RGDPMID:17548643
Adam8Ratspecific granule located_inIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
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Molecular Function
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Original Reference(s)
Adam8Ratcalcium ion binding enablesIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratcalcium ion binding enablesISOAdam8 (Mus musculus)1624291 PMID:12372841RGDPMID:12372841
Adam8Ratcell adhesion molecule binding enablesIBAMGI:107825 and PANTHER:PTN0026286751600115GO_REF:0000033GO_CentralGO_REF:0000033
Adam8Ratcell adhesion molecule binding enablesIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratcell adhesion molecule binding enablesISOAdam8 (Mus musculus)1624291UniProtKB:P05532 more ...RGDPMID:12135759 and PMID:20826683
Adam8Ratimmunoglobulin receptor binding enablesISOADAM8 (Homo sapiens)1624291UniProtKB:P06734 and PMID:12777399RGDPMID:12777399
Adam8Ratimmunoglobulin receptor binding enablesIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
Adam8Ratmetalloendopeptidase activity enablesIEAInterPro:IPR0015901600115GO_REF:0000002InterProGO_REF:0000002
Adam8Ratmetalloendopeptidase activity enablesIBAFB:FBgn0034903 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Adam8Ratmetallopeptidase activity enablesISOADAM8 (Homo sapiens)1624291 PMID:12777399 more ...RGDPMID:12777399 more ...
Adam8Ratmetallopeptidase activity enablesIEAInterPro:IPR0240791600115GO_REF:0000002InterProGO_REF:0000002
Adam8Ratmetallopeptidase activity enablesIEAUniProtKB:Q05910 and ensembl:ENSMUSP000001016841600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratmetallopeptidase activity enablesIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratmetallopeptidase activity enablesISOAdam8 (Mus musculus)1624291 PMID:12135759 more ...RGDPMID:12135759 more ...
Adam8Ratprotein binding enablesISOADAM8 (Homo sapiens)1624291UniProtKB:O95633 more ...RGDPMID:15574124 more ...
Adam8Ratprotein binding enablesISOAdam8 (Mus musculus)1624291UniProtKB:P04370 more ...RGDPMID:12135759 more ...
Adam8Rattumor necrosis factor receptor superfamily binding enablesISOADAM8 (Homo sapiens)1624291UniProtKB:P28908 and PMID:12777399RGDPMID:12777399
Adam8Rattumor necrosis factor receptor superfamily binding enablesIEAUniProtKB:P78325 and ensembl:ENSP000004533021600115GO_REF:0000107EnsemblGO_REF:0000107
Adam8Ratzinc ion binding enablesISOAdam8 (Mus musculus)1624291 PMID:12135759 and PMID:12372841RGDPMID:12135759 and PMID:12372841
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Reference Title
Reference Citation
1. Upregulation of ADAM8 in the airways of mice with allergic bronchial asthma. Chiba Y, etal., Lung. 2009 May-Jun;187(3):179-85. Epub 2009 Apr 17.
2. Increased expression of ADAM33 and ADAM8 with disease progression in asthma. Foley SC, etal., J Allergy Clin Immunol. 2007 Apr;119(4):863-71. Epub 2007 Mar 6.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Increased serum ADAM8 concentration in patients with drug-induced eosinophilic pneumonia-ADAM8 expression depends on a the allergen route of entry. Matsuno O, etal., Respir Med. 2010 Jan;104(1):34-9. Epub 2009 Jul 21.
5. The metalloprotease-disintegrin ADAM8 is essential for the development of experimental asthma. Naus S, etal., Am J Respir Crit Care Med. 2010 Jun 15;181(12):1318-28. Epub 2010 Mar 1.
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Comprehensive gene review and curation RGD comprehensive gene curation
10. The disintegrin domain of ADAM 8 enhances protection against rat experimental autoimmune encephalomyelitis, neuritis and uveitis by a polyvalent autoantigen vaccine. Schluesener HJ J Neuroimmunol. 1998 Jul 1;87(1-2):197-202.
11. ADAM8 expression is associated with increased invasiveness and reduced patient survival in pancreatic cancer. Valkovskaya N, etal., J Cell Mol Med. 2007 Sep-Oct;11(5):1162-74.
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PMID:11341326   PMID:12135759   PMID:12372841   PMID:12777399   PMID:14761956   PMID:15220135   PMID:16995821   PMID:17548643   PMID:18397961   PMID:18566576   PMID:19003792   PMID:19397475  
PMID:20683884   PMID:20826683   PMID:20856819   PMID:21268008   PMID:21728900   PMID:31640732   PMID:38218854  



Adam8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81204,206,206 - 204,218,988 (-)NCBIGRCr8
mRatBN7.21194,776,559 - 194,789,330 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1194,770,060 - 194,788,801 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01212,317,510 - 212,332,895 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,317,848 - 212,330,349 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01219,236,436 - 219,251,059 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41199,780,772 - 199,791,855 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1192,454,105 - 192,468,808 (-)NCBICelera
Cytogenetic Map1q41NCBI
ADAM8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810133,262,423 - 133,276,868 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10133,262,420 - 133,276,868 (-)EnsemblGRCh38hg38GRCh38
GRCh3710135,075,927 - 135,090,372 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610134,925,911 - 134,940,362 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410134,964,788 - 134,979,211NCBI
Celera10128,426,024 - 128,440,474 (+)NCBICelera
Cytogenetic Map10q26.3NCBI
HuRef10128,622,621 - 128,637,236 (-)NCBIHuRef
CHM1_110135,357,756 - 135,372,278 (-)NCBICHM1_1
T2T-CHM13v2.010134,218,053 - 134,232,489 (-)NCBIT2T-CHM13v2.0
Adam8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397139,558,845 - 139,573,016 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7139,558,845 - 139,572,475 (-)EnsemblGRCm39 Ensembl
GRCm387139,978,932 - 139,995,207 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7139,978,932 - 139,992,562 (-)EnsemblGRCm38mm10GRCm38
MGSCv377147,164,840 - 147,178,387 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367139,830,261 - 139,843,808 (-)NCBIMGSCv36mm8
Celera7139,782,797 - 139,796,305 (-)NCBICelera
Cytogenetic Map7F4NCBI
cM Map784.96NCBI
Adam8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547710,895,446 - 10,907,215 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495547710,894,288 - 10,906,961 (-)NCBIChiLan1.0ChiLan1.0
ADAM8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28145,386,583 - 145,400,948 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110145,391,940 - 145,406,305 (-)NCBINHGRI_mPanPan1
PanPan1.110134,171,986 - 134,186,221 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10134,172,724 - 134,186,227 (-)Ensemblpanpan1.1panPan2
ADAM8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12840,853,665 - 40,865,604 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2840,855,509 - 40,863,747 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2840,909,672 - 40,921,207 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02841,490,792 - 41,502,283 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2841,490,100 - 41,500,790 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12840,973,551 - 40,985,028 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02840,962,945 - 40,974,543 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02841,365,582 - 41,377,170 (-)NCBIUU_Cfam_GSD_1.0
Adam8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244072136,156,736 - 6,171,452 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648619,391,324 - 19,402,332 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648619,389,925 - 19,403,577 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADAM8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14141,221,198 - 141,232,306 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114141,221,177 - 141,233,728 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214153,183,627 - 153,194,348 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADAM8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12653,114,184 - 53,129,650 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2653,114,924 - 53,126,900 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605441,248,757 - 41,264,128 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adam8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473713,459,274 - 13,474,686 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Adam8
32 total Variants

Predicted Target Of
Summary Value
Count of predictions:95
Count of miRNA genes:81
Interacting mature miRNAs:84
Transcripts:ENSRNOT00000024369
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 90 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1167909849212909849Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1171629477216629477Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1171629477216629477Rat
1302787Stl25Serum triglyceride level QTL 252.70.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1180359209210702199Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383668Rat

1 to 10 of 90 rows
RH132117  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21194,776,629 - 194,776,843 (+)MAPPERmRatBN7.2
Rnor_6.01212,317,569 - 212,317,782NCBIRnor6.0
Rnor_5.01219,236,514 - 219,236,727UniSTSRnor5.0
RGSC_v3.41199,780,070 - 199,780,283UniSTSRGSC3.4
Celera1192,454,164 - 192,454,377UniSTS
RH 3.4 Map11437.21UniSTS
Cytogenetic Map1q41UniSTS
AW528396  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21194,789,543 - 194,789,724 (+)MAPPERmRatBN7.2
Rnor_6.01212,331,143 - 212,331,323NCBIRnor6.0
Rnor_5.01219,249,314 - 219,249,494UniSTSRnor5.0
RGSC_v3.41199,793,637 - 199,793,817UniSTSRGSC3.4
Celera1192,467,056 - 192,467,236UniSTS
RH 3.4 Map11437.6UniSTS
Cytogenetic Map1q41UniSTS
RH131378  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21194,778,389 - 194,778,596 (+)MAPPERmRatBN7.2
Rnor_6.01212,319,329 - 212,319,535NCBIRnor6.0
Rnor_5.01219,238,274 - 219,238,480UniSTSRnor5.0
RGSC_v3.41199,781,829 - 199,782,035UniSTSRGSC3.4
Celera1192,455,924 - 192,456,130UniSTS
Cytogenetic Map1q41UniSTS
BF399127  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21194,789,457 - 194,789,612 (+)MAPPERmRatBN7.2
Rnor_6.01212,331,057 - 212,331,211NCBIRnor6.0
Rnor_5.01219,249,228 - 219,249,382UniSTSRnor5.0
RGSC_v3.41199,793,551 - 199,793,705UniSTSRGSC3.4
Celera1192,466,970 - 192,467,124UniSTS
RH 3.4 Map11437.21UniSTS
Cytogenetic Map1q41UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000024369   ⟹   ENSRNOP00000024369
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1194,770,060 - 194,788,801 (-)Ensembl
Rnor_6.0 Ensembl1212,317,848 - 212,330,349 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000103573   ⟹   ENSRNOP00000077537
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1194,770,089 - 194,788,801 (-)Ensembl
RefSeq Acc Id: NM_001427124   ⟹   NP_001414053
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81204,206,213 - 204,218,322 (-)NCBI
RefSeq Acc Id: XM_006230499   ⟹   XP_006230561
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81204,206,206 - 204,218,988 (-)NCBI
mRatBN7.21194,776,559 - 194,789,330 (-)NCBI
Rnor_6.01212,317,510 - 212,332,895 (-)NCBI
Rnor_5.01219,236,436 - 219,251,059 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006230500   ⟹   XP_006230562
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81204,206,206 - 204,218,988 (-)NCBI
mRatBN7.21194,776,559 - 194,789,330 (-)NCBI
Rnor_6.01212,317,510 - 212,332,895 (-)NCBI
Rnor_5.01219,236,436 - 219,251,059 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006230501   ⟹   XP_006230563
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81204,206,206 - 204,218,988 (-)NCBI
mRatBN7.21194,776,559 - 194,789,330 (-)NCBI
Rnor_6.01212,317,510 - 212,332,895 (-)NCBI
Rnor_5.01219,236,436 - 219,251,059 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017590243   ⟹   XP_017445732
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81204,207,331 - 204,218,988 (-)NCBI
mRatBN7.21194,777,648 - 194,789,330 (-)NCBI
Rnor_6.01212,318,583 - 212,332,895 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039101260   ⟹   XP_038957188
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81204,206,206 - 204,218,988 (-)NCBI
mRatBN7.21194,776,559 - 194,789,330 (-)NCBI
RefSeq Acc Id: XM_039101261   ⟹   XP_038957189
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81204,206,206 - 204,218,988 (-)NCBI
mRatBN7.21194,776,559 - 194,789,330 (-)NCBI
RefSeq Acc Id: XM_063271567   ⟹   XP_063127637
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81204,206,206 - 204,218,988 (-)NCBI
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: XP_006230563   ⟸   XM_006230501
- Peptide Label: isoform X6
- UniProtKB: A0A8I5Y1P5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006230562   ⟸   XM_006230500
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006230561   ⟸   XM_006230499
- Peptide Label: isoform X1
- UniProtKB: D3ZB52 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017445732   ⟸   XM_017590243
- Peptide Label: isoform X5
- Sequence:
Ensembl Acc Id: ENSRNOP00000024369   ⟸   ENSRNOT00000024369
Disintegrin   EGF-like   Peptidase M12B

Name Modeler Protein Id AA Range Protein Structure
AF-D3ZB52-F1-model_v2 AlphaFold D3ZB52 1-823 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13690512
Promoter ID:EPDNEW_R1032
Type:single initiation site
Name:Adam8_1
Description:ADAM metallopeptidase domain 8
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01212,330,279 - 212,330,339EPDNEW


1 to 38 of 38 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-57070 BioCyc
Ensembl Genes ENSRNOG00000017897 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000024369 ENTREZGENE
  ENSRNOT00000024369.7 UniProtKB/TrEMBL
  ENSRNOT00000103573 ENTREZGENE
  ENSRNOT00000103573.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.390.10 UniProtKB/TrEMBL
  4.10.70.10 UniProtKB/TrEMBL
InterPro ADAM_Cys-rich UniProtKB/TrEMBL
  Blood-coag_inhib_Disintegrin UniProtKB/TrEMBL
  Disintegrin_CS UniProtKB/TrEMBL
  Disintegrin_dom_sf UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
  MetalloPept_cat_dom UniProtKB/TrEMBL
  Peptidase_M12B UniProtKB/TrEMBL
  Peptidase_M12B_N UniProtKB/TrEMBL
  Reprolysin_adamalysin UniProtKB/TrEMBL
NCBI Gene 499285 ENTREZGENE
PANTHER ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN UniProtKB/TrEMBL
  DISINTEGRIN AND METALLOPROTEINASE DOMAIN-CONTAINING PROTEIN 8 UniProtKB/TrEMBL
Pfam ADAM_CR UniProtKB/TrEMBL
  Disintegrin UniProtKB/TrEMBL
  Pep_M12B_propep UniProtKB/TrEMBL
  Reprolysin UniProtKB/TrEMBL
PhenoGen Adam8 PhenoGen
PRINTS DISINTEGRIN UniProtKB/TrEMBL
PROSITE ADAM_MEPRO UniProtKB/TrEMBL
  DISINTEGRIN_1 UniProtKB/TrEMBL
  DISINTEGRIN_2 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000017897 RatGTEx
SMART ACR UniProtKB/TrEMBL
  DISIN UniProtKB/TrEMBL
Superfamily-SCOP Disintegrin UniProtKB/TrEMBL
  Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
UniProt A0A8I5Y1P5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZB52 ENTREZGENE, UniProtKB/TrEMBL
1 to 38 of 38 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-18 Adam8  ADAM metallopeptidase domain 8  Adam8  a disintegrin and metallopeptidase domain 8  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Adam8  a disintegrin and metallopeptidase domain 8  RGD1566394_predicted  similar to cysteine-rich glycoprotein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1566394_predicted  similar to cysteine-rich glycoprotein (predicted)  LOC499285  similar to cysteine-rich glycoprotein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC499285  similar to cysteine-rich glycoprotein      Symbol and Name status set to provisional 70820 PROVISIONAL