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Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | aortic dissection | | ISO | RGD:1353187 | 8554872 | ClinVar Annotator: match by term: Ascending aortic dissection | ClinVar | PMID:34409081 | |
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Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | aortic dissection | | ISO | RGD:1353187 | 8554872 | ClinVar Annotator: match by term: Ascending aortic dissection | ClinVar | PMID:34409081 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Cloning of a cDNA encoding a novel interleukin-1 receptor related protein (IL 1R-rp2). | Lovenberg TW, etal., J Neuroimmunol 1996 Nov;70(2):113-22. |
3. | Deficiency of Interleukin-36 Receptor Protected Cardiomyocytes from Ischemia-Reperfusion Injury in Cardiopulmonary Bypass. | Luo C, etal., Med Sci Monit. 2020 Feb 12;26:e918933. doi: 10.12659/MSM.918933. |
4. | Electronic Transfer of LocusLink and RefSeq Data | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
5. | GOA pipeline | RGD automated data pipeline |
6. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
7. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
Il1rl2 (Rattus norvegicus - Norway rat) |
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IL1RL2 (Homo sapiens - human) |
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Il1rl2 (Mus musculus - house mouse) |
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Il1rl2 (Chinchilla lanigera - long-tailed chinchilla) |
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IL1RL2 (Pan paniscus - bonobo/pygmy chimpanzee) |
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IL1RL2 (Canis lupus familiaris - dog) |
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Il1rl2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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IL1RL2 (Sus scrofa - pig) |
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IL1RL2 (Chlorocebus sabaeus - green monkey) |
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Il1rl2 (Heterocephalus glaber - naked mole-rat) |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | |||||||||||||
Low | 2 | 12 | 12 | 4 | 19 | 4 | 32 | 14 | 31 | 11 | |||
Below cutoff | 1 | 28 | 36 | 34 | 34 | 5 | 7 | 42 | 20 | 10 | 5 |
RefSeq Transcripts | NM_133575 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_017596258 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017596259 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017596260 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | CH473965 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JACYVU010000213 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
U49066 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000019880 ⟹ ENSRNOP00000019880 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_133575 ⟹ NP_598259 | ||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017596259 ⟹ XP_017451748 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_598259 | (Get FASTA) | NCBI Sequence Viewer |
XP_017451748 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAB53238 | (Get FASTA) | NCBI Sequence Viewer |
EDL99176 | (Get FASTA) | NCBI Sequence Viewer | |
EDL99177 | (Get FASTA) | NCBI Sequence Viewer | |
Q62929 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_598259 ⟸ NM_133575 |
- Peptide Label: | precursor |
- Sequence: |
RefSeq Acc Id: | XP_017451748 ⟸ XM_017596259 |
- Peptide Label: | isoform X1 |
- UniProtKB: | G3V7W4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000019880 ⟸ ENSRNOT00000019880 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q62929-F1-model_v2 | AlphaFold | Q62929 | 1-561 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:621782 | AgrOrtholog |
BioCyc Gene | G2FUF-27724 | BioCyc |
Ensembl Genes | ENSRNOG00000014683 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Protein | ENSRNOP00000019880 | ENTREZGENE |
ENSRNOP00000019880.1 | UniProtKB/TrEMBL | |
Ensembl Transcript | ENSRNOT00000019880 | ENTREZGENE |
ENSRNOT00000019880.4 | UniProtKB/TrEMBL | |
Gene3D-CATH | 2.60.40.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
3.40.50.10140 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
InterPro | Ig-like_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ig-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ig-like_fold | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ig_6 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ig_sub | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ig_sub2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
IL-1_rcpt_fam | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
IL-1_rcpt_I/II-typ | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TIR_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Toll_tir_struct_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:171106 | UniProtKB/Swiss-Prot |
NCBI Gene | 171106 | ENTREZGENE |
PANTHER | PTHR11890 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Pfam | Ig_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ig_6 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TIR | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Il1rl2 | PhenoGen |
PRINTS | INTRLKN1R12F | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROSITE | IG_LIKE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
TIR | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | IGc2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SM00409 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TIR | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF48726 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF52200 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | G3V7W4 | ENTREZGENE, UniProtKB/TrEMBL |
ILRL2_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2004-09-10 | Il1rl2 | interleukin 1 receptor-like 2 | Symbol and Name status set to approved | 1299863 | APPROVED | ||
2002-08-07 | Il1rl2 | interleukin 1 receptor-like 2 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |
Note Type | Note | Reference |
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gene_expression | expressed in lung and epididymis with lower levels of expression detected in the testis and cerebral cortex | 729063 |
gene_function | did not bind either [125I]-recombinant human IL 1 alpha or [125I]-recombinant human IL 1 beta with high affinity | 729063 |