Alcrsp12 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Alcrsp12 (Alcohol response QTL 12) Rattus norvegicus

Symbol: Alcrsp12
Name: Alcohol response QTL 12
RGD ID: 1641894
Previously known as: neurotensin receptor 1 density; NTR1
Trait: response to alcohol trait   (VT:0010489)    
Measurement Type: brain neurotensin receptor 1 density   (CMO:0002068)    
LOD Score: Likelihood Ratio: 14.9
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8934,960,590 - 79,960,590RGD_MAPPER_PIPELINE
mRatBN7.2927,468,639 - 72,468,639RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0932,385,133 - 77,385,133RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0932,091,449 - 77,091,449RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4924,535,785 - 69,535,785RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.1924,537,199 - 69,537,199RGD
Cross Type: intercross
Strains Crossed: LAS1 HAS1 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
HAS1  (IEA)
LAS1  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Quantitative trait Loci mapping for ethanol sensitivity and neurotensin receptor density in an F2 intercross derived from inbred high and low alcohol sensitivity selectively bred rat lines. Radcliffe RA, etal., Alcohol Clin Exp Res 2004 Dec;28(12):1796-804.
2. Confirmation of quantitative trait loci for ethanol sensitivity and neurotensin receptor density in crosses derived from the inbred high and low alcohol sensitive selectively bred rat lines. Radcliffe RA, etal., Psychopharmacology (Berl). 2006 Oct;188(3):343-54. Epub 2006 Sep 5.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1309703Adgrb3adhesion G protein-coupled receptor B392742116828148979Rat
40964348LOC120094962U2 spliceosomal RNA92765647227656615Rat
41255525LOC120094653uncharacterized LOC12009465392814930428154124Rat
41042201LOC120094965U4 spliceosomal RNA92844600728446144Rat
41227410LOC120094898U11 spliceosomal RNA92856277828562911Rat
41262561LOC120094978U6 spliceosomal RNA92866414928664255Rat
11365616Hsp90ab1-ps20heat shock protein 90 alpha family class B member 1, pseudogene 2092877386328789378Rat
41366852LOC120094941small nucleolar RNA SNORA1792887119028871294Rat
1588763Spata31e1l1SPATA31 subfamily E, member 1 like 192899323128999521Rat
2318365Rplp1-ps3ribosomal protein lateral stalk subunit P1, pseudogene 392906258729063019Rat
41057302LOC120094866U6 spliceosomal RNA92973260929732713Rat
7729430LOC102554152uncharacterized LOC10255415293005567730066038Rat
41017258LOC120094982U6 spliceosomal RNA93029237930292485Rat
1559965Wbp11-ps5WW domain binding protein 11, pseudogene 593076218030763745Rat
41280595LOC120094655uncharacterized LOC12009465593084836330925836Rat
40955717LOC120094934small nucleolar RNA SNORA1793085867830858801Rat
6489933Spata31e1SPATA31 subfamily E, member 193109855731104212Rat
40932165LOC120094656uncharacterized LOC12009465693124350231265028Rat
41327919LOC120094657uncharacterized LOC12009465793177815331826103Rat
7637214LOC102554281uncharacterized LOC10255428193185543031907027Rat
1592055Hnrnpa1-ps17heterogeneous nuclear ribonucleoprotein A1, pseudogene 1793240353632405287Rat
1588705Dnajb6-ps6DnaJ heat shock protein family (Hsp40) member B6, pseudogene 693279874632799447Rat
2318113Zfp706-ps1zinc finger protein 706, pseudogene 193297066932970915Rat
621477Eif4g2-ps1eukaryotic translation initiation factor 4, gamma 2, pseudogene 193304688433050665Rat
1304925Phf3PHD finger protein 393306385533136013Rat
61970Ptp4a1protein tyrosine phosphatase 4A193321420133245046Rat
7590823LOC102548289uncharacterized LOC10254828993322266233247053Rat
727925Lgsnlengsin, lens protein with glutamine synthetase domain93341636233447919Rat
41117169LOC120094931small nucleolar RNA SNORA1793353951733539639Rat
1586396Ube2v1-ps22ubiquitin conjugating enzyme E2 V1, pseudogene 2293363377033634238Rat
41062037LOC120094908small nucleolar RNA SNORA4893364748933647629Rat
6500396Eef1a1-ps1eukaryotic translation elongation factor 1 alpha 1, pseudogene 193380476333825540Rat
41178156LOC120094869U6 spliceosomal RNA93391259533912698Rat
621738Khdrbs2KH RNA binding domain containing, signal transduction associated 293444702334953684Rat
41205098LOC120094876U7 small nuclear RNA93481841034818473Rat
1586334Zfp622l1zinc finger protein 622 like 193547860335480175Rat
1586327Fus-ps6FUS RNA binding protein, pseudogene 693554914035550782Rat
6500780Swi5-ps1SWI5 homologous recombination repair protein, pseudogene 193563369035641769Rat
1590809Trir-ps2telomerase RNA component interacting RNase, pseudogene 293567960735690156Rat
631433Prim2DNA primase subunit 293569237635904521Rat
1585200Cfl2-ps2cofilin-2, pseudogene 293593445635934941Rat
1306867Rab23RAB23, member RAS oncogene family93594352235967367Rat
1585173Bag2BAG cochaperone 293597003335980677Rat
40982266Ube2i-ps5ubiquitin-conjugating enzyme E2I, pseudogene 593598239035984367Rat
1305865Zfp451zinc finger protein 45193598544136040991Rat
41388092Rps18-ps7ribosomal protein S18, pseudogene 793604717836048807Rat
1310392Bend6BEN domain containing 693608103336135309Rat
1306566Dstdystonin93613565736529617Rat
7647959LOC102551615uncharacterized LOC10255161593623287736236460Rat
7638136Foxo1lforkhead box O1 like93663661736646847Rat
41065030LOC120094660uncharacterized LOC12009466093664695436649913Rat
11444069Trnae-uuc5transfer RNA glutamic acid (anticodon UUC) 593664787436647945Rat
1304653Ccdc115coiled-coil domain containing 11593665038436654348Rat
1308463Imp4IMP U3 small nucleolar ribonucleoprotein 493665412736659265Rat
1311586Ptpn18protein tyrosine phosphatase, non-receptor type 1893667232536689963Rat
1309276Prss39protease, serine, 3993669503736713004Rat
1562188Cfc1cripto, FRL-1, cryptic family 193674210636751931Rat
1561330Prss40protease, serine, 4093676217036770979Rat
41154104Rcbtb1-ps1RCC1 and BTB domain containing protein 1, pseudogene 193677613336790749Rat
1560420Amer3APC membrane recruitment protein 393679035536802341Rat
41346670LOC120094661thymosin beta-10-like93683736136852737Rat
1562461Rplp1-ps1ribosomal protein lateral stalk subunit P1, pseudogene 193684993236855302Rat
1586179Arhgef4Rho guanine nucleotide exchange factor 493686180037005079Rat
41114033LOC120094663uncharacterized LOC12009466393692366936928337Rat
1583985Fam168bfamily with sequence similarity 168, member B93700556937038631Rat
41242603LOC120094662uncharacterized LOC12009466293703746337047132Rat
1310954Plekhb2pleckstrin homology domain containing B293704958037082231Rat
41119832LOC120094916U1 spliceosomal RNA93707511237075272Rat
1560533Rps14-ps2ribosomal protein S14, pseudogene 293715329037153723Rat
41107238LOC120094913small nucleolar RNA SNORA1793733515037335272Rat
41333059LOC120094922small nucleolar RNA SNORA1793733552637335650Rat
41290364LOC120094862U6 spliceosomal RNA93796214137962247Rat
41190690LOC120094844uncharacterized LOC12009484493803119438033635Rat
41024403LOC120094664uncharacterized LOC12009466493812136838165876Rat
41096174LOC120094665uncharacterized LOC12009466593813057338137099Rat
6484877Hdac1-ps10Histone deacetylase 1, pseudogene 1093817277738173577Rat
1309218Hs6st1heparan sulfate 6-O-sulfotransferase 193828350238322684Rat
619710Uggt1UDP-glucose glycoprotein glucosyltransferase 193835522938468473Rat
6501582LOC100909803uncharacterized LOC10090980393848109638488323Rat
1359633Neurl3neuralized E3 ubiquitin protein ligase 393849448638503352Rat
7500673LOC102554222uncharacterized LOC10255422293850255338512621Rat
1311041Arid5aAT-rich interaction domain 5A93853461238549467Rat
1309220Kansl3KAT8 regulatory NSL complex subunit 393856217038605757Rat
1583681Fer1l5fer-1-like family member 593860583538661869Rat
1311393Lman2llectin, mannose-binding 2-like93866170938685244Rat
1305571Cnnm4cyclin and CBS domain divalent metal cation transport mediator 493871172638750942Rat
1307926Cnnm3cyclin and CBS domain divalent metal cation transport mediator 393875537438770740Rat
1310398Ankrd23ankyrin repeat domain 2393877323438778705Rat
1559504Ankrd39ankyrin repeat domain 3993878029138790177Rat
1562837Sema4csemaphorin 4C93879166838802171Rat
1564591Fam178bfamily with sequence similarity 178, member B93880586438913681Rat
41115964LOC120094668uncharacterized LOC12009466893891376938918495Rat
620608Cox5bcytochrome c oxidase subunit 5B93892198038923806Rat
1307380Actr1bactin related protein 1B93892881938938483Rat
6501168C9h2orf92similar to human chromosome 2 open reading frame 9293894392738984878Rat
41036328LOC120094966U4 spliceosomal RNA93898235938982474Rat
3983Zap70zeta chain of T cell receptor associated protein kinase 7093898975039011701Rat
1309266Tmem131transmembrane protein 13193901647039162841Rat
1562560Vwa3bvon Willebrand factor A domain containing 3B93924952339419614Rat
41312543Trnaa-agc41transfer RNA alanine (anticodon AGC) 4193930165739301729Rat
7728653LOC102554996uncharacterized LOC10255499693933222239334749Rat
70948Cnga3cyclic nucleotide gated channel subunit alpha 393944753439494044Rat
68386Inpp4ainositol polyphosphate-4-phosphatase type I A93952824539650574Rat
1565095Coa5cytochrome C oxidase assembly factor 593965145939664870Rat
621749Unc50unc-50 inner nuclear membrane RNA binding protein93966494439674369Rat
1305650Mgat4aalpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A93967342739786747Rat
41360059LOC120094669uncharacterized LOC12009466993969766939727620Rat
1310819CracdlCRACD like93983432139950763Rat
41240104LOC120094963U2 spliceosomal RNA93993229239932472Rat
621142Tsga10testis specific 1093999120340098259Rat
1310276Lipt1lipoyltransferase 194010793840118268Rat
1307700Mitd1microtubule interacting and trafficking domain containing 194011394340125280Rat
1308196Mrpl30mitochondrial ribosomal protein L3094012535240136189Rat
6496811Lyg2lysozyme G294014114440150821Rat
1560332Lyg1lysozyme G194017112340182869Rat
708355Txndc9thioredoxin domain containing 994021181840221953Rat
735017Eif5beukaryotic translation initiation factor 5B94022276940277482Rat
1306715Rev1REV1, DNA directed polymerase94027810040351764Rat
1308527Aff3ALF transcription elongation factor 394039909940856716Rat
40935687Trnat-agu33transfer RNA threonine (anticodon AGU) 3394043234540432425Rat
41163881LOC120094904small nucleolar RNA SNORA4894092276640922908Rat
1562137Lonrf2LON peptidase N-terminal domain and ring finger 294103312541070551Rat
621216Chst10carbohydrate sulfotransferase 1094109280541122737Rat
41038988LOC120094971U6 spliceosomal RNA94112322841123334Rat
1359122Nmsneuromedin S94116963441180697Rat
1309663Pdcl3phosducin-like 394123432241243769Rat
11451021Sec61gl4SEC61 translocon subunit gamma like 494130267341303608Rat
11443911LOC108352023uncharacterized LOC10835202394130423141307924Rat
41361104LOC120094670uncharacterized LOC12009467094139821741414897Rat
1309681Npas2neuronal PAS domain protein 294146336141642322Rat
41277081LOC120094671uncharacterized LOC12009467194147413741475046Rat
621202Rpl31ribosomal protein L3194164739741651441Rat
1595491Tbc1d8TBC1 domain family, member 894165139441761432Rat
1560909Cnot11CCR4-NOT transcription complex, subunit 1194181492341824626Rat
1308460Rnf149ring finger protein 14994182682541854381Rat
41016240Snord89small nucleolar RNA, C/D box 8994182797241828086Rat
41130776Rnf149-ps2ring finger protein 149, pseudogene 294182906241830546Rat
1564056Creg2cellular repressor of E1A-stimulated genes 294187200041945413Rat
41098019LOC120094921small nucleolar RNA SNORA1794192134041921468Rat
1560724Rfx8regulatory factor X894195758942021432Rat
11433865LOC108351918uncharacterized LOC10835191894202017642025870Rat
41093670LOC120094674uncharacterized LOC12009467494211183542117297Rat
2321066Cox6a1-ps2cytochrome c oxidase subunit 6A1, pseudogene 294216974742170079Rat
1305322Map4k4mitogen-activated protein kinase kinase kinase kinase 494220070842326708Rat
621147Il1r2interleukin 1 receptor type 294238428042424726Rat
41272762LOC120094675uncharacterized LOC12009467594246667042468248Rat
1564447H3f3al3H3.3 histone A like 394249400742495112Rat
2892Il1r1interleukin 1 receptor type 194250491742580958Rat
621782Il1rl2interleukin 1 receptor-like 294259165842639351Rat
2894Il1rl1interleukin 1 receptor-like 194266169442727266Rat
1308589Il18r1interleukin 18 receptor 194272741642760971Rat
727867Il18rapinterleukin 18 receptor accessory protein94276811242800964Rat
3721Slc9a4solute carrier family 9 member A494282533442879729Rat
3719Slc9a2solute carrier family 9 member A294293200143014447Rat
9295055LOC103690525uncharacterized LOC10369052594293496542943357Rat
1562212Mfsd9major facilitator superfamily domain containing 994301961143039100Rat
1563696Tmem182transmembrane protein 18294305943243111318Rat
41288307LOC120094676uncharacterized LOC12009467694311709643119324Rat
6499281LOC100910304uncharacterized LOC10091030494345148443528710Rat
11495887LOC108352024uncharacterized LOC10835202494358788243617987Rat
2320919Rps8-ps5ribosomal protein S8, pseudogene 594372584043726444Rat
7613346LOC102549950uncharacterized LOC10254995094373934443744575Rat
11452400LOC108351921uncharacterized LOC10835192194395688644145114Rat
11382578LOC108352025uncharacterized LOC10835202594417329344246711Rat
41003253LOC120094677uncharacterized LOC12009467794452142544577442Rat
41006317LOC120094678uncharacterized LOC12009467894459919444629263Rat
1562818Rpl35-ps10ribosomal protein L35, pseudogene 1094487377244874628Rat
7688151Pantr1POU3F3 adjacent non-coding transcript 194489833844943631Rat
619768Pou3f3POU class 3 homeobox 394494587244948998Rat
9182814LOC103690528uncharacterized LOC10369052894497453944981088Rat
1306558Mrps9mitochondrial ribosomal protein S994511355445172375Rat
41053977LOC120094930small nucleolar RNA SNORA1794512781245127930Rat
1306253Gpr45G protein-coupled receptor 4594522136445309713Rat
40944792Hnrnpa1-ps34heterogeneous nuclear ribonucleoprotein A1, pseudogene 3494524630645247422Rat
1560362Arpc5l-ps1actin related protein 2/3 complex, subunit 5-like, pseudogene 194526335245264349Rat
1310772Tgfbrap1transforming growth factor, beta receptor associated protein 194532097545371329Rat
1310553C9h2orf49similar to human chromosome 2 open reading frame 4994537139645382123Rat
61963Fhl2four and a half LIM domains 294538897945462421Rat
11472363LOC108351922thymosin beta-10 pseudogene94554465545544831Rat
1592054Hsp90ab1-ps13heat shock protein 90 alpha family class B member 1, pseudogene 1394554506345547427Rat
41019548LOC120094961U2 spliceosomal RNA94558722445587387Rat
1305965Nck2NCK adaptor protein 294571397945840330Rat
1560806Golph3l-ps1golgi phosphoprotein 3-like, pseudogene 194589049245891363Rat
1305645Ecrg4ECRG4 augurin precursor94599295446012605Rat
41147243Mrpl30-ps7mitochondrial ribosomal protein L30, pseudogene 794603925946045901Rat
621584Tpp2tripeptidyl peptidase 294604671246128157Rat
41332032LOC120094976U6 spliceosomal RNA94606065646060762Rat
1561425Mettl21cmethyltransferase 21C, AARS1 lysine94613045146145128Rat
1586177Dnajc14-ps2DnaJ heat shock protein family (Hsp40) member C14, pseudogene 294617746346179852Rat
7680407Ccdc168coiled-coil domain containing 16894619823446236325Rat
1309095Tex30testis expressed 3094624341646252273Rat
1304684Poglut2protein O-glucosyltransferase 294625638846268714Rat
1311888Bivmbasic, immunoglobulin-like variable motif containing94626875846305038Rat
1586176Ercc5ERCC excision repair 5, endonuclease94630947746354478Rat
1596736Mettl21cl1methyltransferase like 21C-like 194638214146397299Rat
1562067Cdca3l1cell division cycle associated 3 like 194650653346507525Rat
1306380Gulp1GULP PTB domain containing engulfment adaptor 194662269946899005Rat
41128029LOC120094972U6 spliceosomal RNA94688023246880338Rat
1590772Hspd1-ps13heat shock protein family D (Hsp60) member 1, pseudogene 1394699145746996798Rat
1595408Ahcy-ps5adenosylhomocysteinase, pseudogene 594702399047025181Rat
1584383Rps3-ps8ribosomal protein S3, pseudogene 894711540647116385Rat
71029Col3a1collagen type III alpha 1 chain94737461147410547Rat
70921Col5a2collagen type V alpha 2 chain94744874147598134Rat
41220839LOC120094964U2 spliceosomal RNA94757283347572962Rat
1562143Ctps1-ps2CTP synthase 1, pseudogene 294780217747803574Rat
1564869Wdr75WD repeat domain 7594790321447933399Rat
2323350Got2-ps3glutamic-oxaloacetic transaminase 2, pseudogene 394799538648000701Rat
620180Slc40a1solute carrier family 40 member 194803352648053876Rat
1597774Plp2l1proteolipid protein 2 like 194807677548077809Rat
41174017AsdurfASNSD1 upstream open reading frame94812680848136134Rat
1306332Asnsd1asparagine synthetase domain containing 194812680848139073Rat
1561071Ankarankyrin and armadillo repeat containing94814153448215400Rat
1305575Osgepl1O-sialoglycoprotein endopeptidase-like 194821499548229440Rat
1359511Pms1PMS1 homolog 1, mismatch repair system component94822940348340237Rat
2300146Ormdl1ORMDL sphingolipid biosynthesis regulator 194824336548253316Rat
41298570LOC120094923small nucleolar RNA SNORA1794839195548392087Rat
3115Mstnmyostatin94845253348458933Rat
1595308Smc6-ps1structural maintenance of chromosomes 6, pseudogene 194852114648522274Rat
1596493C9h2orf88similar to human chromosome 2 open reading frame 8894853914048584882Rat
6486560Srsf7-ps4serine and arginine rich splicing factor 7, pseudogene 494858786548589638Rat
1308392Hibch3-hydroxyisobutyryl-CoA hydrolase94859009748669896Rat
1306071Inpp1inositol polyphosphate-1-phosphatase94868803748717793Rat
1596442Pgap2-ps2post-GPI attachment to proteins 2, pseudogene 294874157148760802Rat
1565371Bnip3-ps1BCL2 interacting protein 3, pseudogene 194876280448764417Rat
1562317Mfsd6major facilitator superfamily domain containing 694877317148858471Rat
1560421Nemp2nuclear envelope integral membrane protein 294886125248880565Rat
70882Nab1Ngfi-A binding protein 194905357949093078Rat
11474459LOC108352026high mobility group protein B1 pseudogene94921481949215542Rat
11444870LOC108351925glyceraldehyde-3-phosphate dehydrogenase pseudogene94927239849273479Rat
2707Glsglutaminase94934461649416900Rat
3771Stat1signal transducer and activator of transcription 194941956149459969Rat
1305747Stat4signal transducer and activator of transcription 494947266049588540Rat
9346435LOC103690550uncharacterized LOC10369055094968777449689862Rat
70994Myo1bmyosin Ib94969004349852373Rat
11365277Tmsb10l3thymosin beta 10 like 394997482349975501Rat
1306658Nabp1nucleic acid binding protein 195009855250133982Rat
41074009Trnaa-agc29transfer RNA alanine (anticodon AGC) 2995010982550109905Rat
41015968LOC120094683uncharacterized LOC12009468395017283950187261Rat
1359345Cavin2caveolae associated protein 295030207950314096Rat
41300716LOC120094969U4 spliceosomal RNA95031778850317913Rat
41107517LOC120094903small nucleolar RNA SNORA4895032157750321728Rat
41234631LOC120094970U6 spliceosomal RNA95042574950425855Rat
1308839Tmeff2transmembrane protein with EGF-like and two follistatin-like domains 295044594750733473Rat
11362092LOC108351929uncharacterized LOC10835192995048922750559755Rat
7543919Npm1-ps7nucleophosmin 1, pseudogene 795056244350587615Rat
7640284Aasdhppt-ps1aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase, pseudogene 195073524950746852Rat
41096178Rps7-ps13ribosomal protein S7, pseudogene 1395087190650872667Rat
2323836Ccdc126-ps1coiled-coil domain containing 126, pseudogene 195124491251245507Rat
1591348Mettl6-ps1methyltransferase like 6, pseudogene 195151474651515605Rat
11446793LOC10835202740S ribosomal protein S28-like95151597051516251Rat
41180480LOC120094929small nucleolar RNA SNORA1795209028852090429Rat
2323675Cyb5d1-ps1cytochrome b5 domain containing 1, pseudogene 195240881552409577Rat
40976196LOC120094959U2 spliceosomal RNA95257495452575147Rat
2323628Tmem19-ps1transmembrane protein 19, pseudogene 195275207852753081Rat
41327220LOC120094983U6 spliceosomal RNA95303196253032064Rat
1590771Nono-ps13non-POU domain containing, octamer-binding, pseudogene 1395304950253055409Rat
2323511Cct6a-ps16chaperonin containing TCP1 subunit 6A, pseudogene 1695325090653252183Rat
1590806Cct6a-ps1chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 195333839953339815Rat
41123000LOC120094847uncharacterized LOC12009484795398840053993546Rat
1590805Clip1-ps1CAP-GLY domain containing linker protein 1, pseudogene 195409906354102686Rat
6498974Nelfe-ps1negative elongation factor complex member E, pseudogene 195422936854231747Rat
2318998Cacybp-ps1calcyclin binding protein, pseudogene 195431312554313795Rat
1587872Pals1-ps1protein associated with LIN7 1, MAGUK p55 family member, pseudogene 195450025654502541Rat
1590804Eno1-ps2enolase 1, pseudogene 295473030254750752Rat
1307321Slc39a10solute carrier family 39 member 1095483684154960325Rat
40971008LOC120094685uncharacterized LOC12009468595484227554876577Rat
621798Dnah7dynein, axonemal, heavy chain 795496023555266529Rat
620457Stk17bserine/threonine kinase 17b95530748555338085Rat
41049662LOC120094686uncharacterized LOC12009468695533793455363100Rat
1593244Hecw2HECT, C2 and WW domain containing E3 ubiquitin protein ligase 295535946255753106Rat
1304775Ccdc150coiled-coil domain containing 15095579354455897341Rat
11383155Rpl31l12ribosomal protein L31 like 1295583391155834622Rat
1309185Gtf3c3general transcription factor IIIC subunit 395588225255943037Rat
1586666C9h2orf66similar to human chromosome 2 open reading frame 6695594580655949855Rat
1303213Pgap1post-GPI attachment to proteins inositol deacylase 195597557456044325Rat
1561893Ankrd44ankyrin repeat domain 4495612674656427661Rat
11391487LOC108351932uncharacterized LOC10835193295632554556333506Rat
1586604Tmem258btransmembrane protein 258 B95645037356450755Rat
1590803Rpl11-ps6ribosomal protein L11, pseudogene 695646902356469614Rat
620148Sf3b1splicing factor 3b, subunit 195649240356532300Rat
1359509Coq10bcoenzyme Q10B95655375156573671Rat
621314Hspd1heat shock protein family D (Hsp60) member 195657919556590011Rat
2844Hspe1heat shock protein family E (Hsp10) member 195658991256593000Rat
620183Mob4MOB family member 4, phocein95661737456641336Rat
9179481LOC103690547glycine cleavage system H protein, mitochondrial pseudogene95663505656636545Rat
1307304Rftn2raftlin family member 295665161756707830Rat
1311527Mars2methionyl-tRNA synthetase 2, mitochondrial95672040856729991Rat
1559527Bollboule homolog, RNA binding protein95673489056859917Rat
708420Plcl1phospholipase C-like 195690157357238782Rat
41125672LOC120094794uncharacterized LOC12009479495690850256915395Rat
11390134LOC108351933uncharacterized LOC10835193395707161657113442Rat
11468746LOC108352000glyceraldehyde-3-phosphate dehydrogenase pseudogene95808334958084426Rat
1311885Hsfy2heat shock transcription factor, Y linked 295818241558183828Rat
1562369Satb2SATB homeobox 295834802758534256Rat
41377830LOC120094880U7 small nuclear RNA95842251458422570Rat
7574954LOC102549320uncharacterized LOC10254932095852723658603337Rat
41273883LOC120094688uncharacterized LOC12009468895889810858899892Rat
7505088LOC102549484uncharacterized LOC10254948495889970458949945Rat
1306941C9h2orf69similar to human chromosome 2 open reading frame 6995894982158958456Rat
1311269Tyw5tRNA-yW synthesizing protein 595896110058979188Rat
1303159Maip1matrix AAA peptidase interacting protein 195897890158986831Rat
41313489LOC120094912small nucleolar RNA SNORA1795899507858995205Rat
1590802Rpl6-ps7ribosomal protein L6, pseudogene 795908227059083124Rat
11493513LOC108351935uncharacterized LOC10835193595910533959149851Rat
1309930Spats2lspermatogenesis associated, serine-rich 2-like95931994959493864Rat
41260367LOC120094689uncharacterized LOC12009468995934920359351098Rat
11470202LOC10835193660S ribosomal protein L30-like95935380059354253Rat
1564820Kctd18potassium channel tetramerization domain containing 1895950222059566857Rat
41052886LOC120094872U6 spliceosomal RNA95954434359544444Rat
1308450Sgo2shugoshin 295954860559573229Rat
620528Aox1aldehyde oxidase 195957962159658772Rat
41096022LOC120094690uncharacterized LOC12009469095965508059658278Rat
1359328Aox3aldehyde oxidase 395966478459749701Rat
41013560LOC120094932small nucleolar RNA SNORA1795970150259701601Rat
41034877Ptp4a1-ps5protein tyrosine phosphatase 4A1, pseudogene 595973618059736701Rat
1311975Aox4aldehyde oxidase 495976123859818169Rat
11403437Rpl21l4ribosomal protein L21 like 495982107659823671Rat
1359668Aox2aldehyde oxidase 295982840359916175Rat
9134966LOC103690538uncharacterized LOC10369053895988788859901999Rat
735129Bzw1basic leucine zipper and W2 domains 195993067259944468Rat
1311469Clk1CDC-like kinase 195994777459959002Rat
631415Ppil3peptidylprolyl isomerase like 395996640559980147Rat
1310329Nif3l1NGG1 interacting factor 3 like 195998010160001490Rat
41352736LOC120094958U2 spliceosomal RNA95998629659986483Rat
1311844Orc2origin recognition complex, subunit 296000163160038301Rat
1309752Hycc2hyccin PI4KA lipid kinase complex subunit 296005688360129176Rat
7709066Banf1-ps3BAF nuclear assembly factor 1, pseudogene 396009990260100455Rat
1310737Ndufb3NADH:ubiquinone oxidoreductase subunit B396012924060139452Rat
620847CflarCASP8 and FADD-like apoptosis regulator96018533860236173Rat
6501057LOC100909946uncharacterized LOC10090994696019500760199453Rat
620945Casp8caspase 896026386360312542Rat
1359362Flacc1flagellum associated containing coiled-coil domains 196031558160343692Rat
41185075LOC120094796uncharacterized LOC12009479696034380860368188Rat
620915Trak2trafficking kinesin protein 296034853160414036Rat
1559449StradbSTE20 related adaptor beta96041418260433084Rat
41344301Trnav-aac15transfer RNA valine (anticodon AAC) 1596041537860415450Rat
1565450C2cd6C2 calcium dependent domain containing 696043492660530842Rat
41076818LOC120094795uncharacterized LOC12009479596045159160485960Rat
41122244LOC120094911small nucleolar RNA SNORA1796050905460509188Rat
1306705Tmem237transmembrane protein 23796053334860569253Rat
620016Mpp4MAGUK p55 scaffold protein 496056973460613035Rat
40979013LOC120094797mitochondrial intermembrane space import and assembly protein 40-like96058484160585260Rat
1310372Als2alsin Rho guanine nucleotide exchange factor ALS296061318260686394Rat
1562399Rps2-ps15ribosomal protein S2, pseudogene 1596069961560700505Rat
1306205Cdk15cyclin-dependent kinase 1596071078760803638Rat
41261015LOC120094798uncharacterized LOC12009479896090520160907409Rat
41189416LOC120094799uncharacterized LOC12009479996091928260922015Rat
2321905Fzd7frizzled class receptor 796093143360934252Rat
1562029Kiaa2012KIAA2012 homolog96096739861076596Rat
1306919Sumo1small ubiquitin-like modifier 196107879061108697Rat
1596173Set-ps16Set nuclear proto-oncogene, pseudogene 1696110895261113900Rat
620484Nop58NOP58 ribonucleoprotein96112093961144810Rat
41058289LOC120094899small nucleolar RNA SNORA4896112427761124421Rat
41160946Snord70small nucleolar RNA, C/D box 7096112597461126060Rat
40961944Snord70bsmall nucleolar RNA, C/D box 70B96112674561126828Rat
41128145Snord11bsmall nucleolar RNA, C/D box 11B96113716861137247Rat
41004670Snord11small nucleolar RNA, C/D box 1196113771561137798Rat
71082Bmpr2bone morphogenetic protein receptor type 296119271861307280Rat
1564239Dbi-ps3diazepam binding inhibitor, acyl-CoA binding protein, pseudogene 396133652861336927Rat
1307676Fam117bfamily with sequence similarity 117, member B96134028461418531Rat
41278460LOC120094801uncharacterized LOC12009480196139447061398897Rat
735110Ica1lislet cell autoantigen 1-like96141095961469884Rat
735072Wdr12WD repeat domain 1296147549861502762Rat
1306822Carfcalcium responsive transcription factor96150236861552433Rat
1594799Nbeal1neurobeachin-like 196157515461743896Rat
41335151Atp5mc2-ps1ATP synthase membrane subunit c locus 2, pseudogene 196174626061746688Rat
735221Cyp20a1cytochrome P450, family 20, subfamily a, polypeptide 196175580461805123Rat
628771Abi2abl-interactor 296182718661905703Rat
1308387Raph1Ras association (RalGDS/AF-6) and pleckstrin homology domains 196190747661990170Rat
7736852LOC102547711uncharacterized LOC10254771196204614362050985Rat
41364019LOC120094895small nucleolar RNA SNORA5196209395062094058Rat
41235983LOC120094692uncharacterized LOC12009469296214346762149952Rat
2299Cd28Cd28 molecule96216632462194674Rat
61975Ctla4cytotoxic T-lymphocyte-associated protein 496231887462325978Rat
620123Icosinducible T-cell co-stimulator96236807562406900Rat
1590313Psma7-ps3proteasome 20S subunit alpha 7, pseudogene 396241270962415587Rat
11385622LOC108351940uncharacterized LOC10835194096244344262466139Rat
7595922LOC102548093uncharacterized LOC10254809396275091462757597Rat
1593480Paics-ps7phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 796290127462922952Rat
1584992Pard3bpar-3 family cell polarity regulator beta96303843564067178Rat
621442Nrp2neuropilin 296412281564238007Rat
7626358LOC102548410uncharacterized LOC10254841096438316264410799Rat
2321317Rpl37-ps5ribosomal protein L37, pseudogene 596441747564417847Rat
41384701LOC120094933small nucleolar RNA SNORA1796443688164436969Rat
1304808Ino80dINO80 complex subunit D96444707564514013Rat
7594970Nop16-ps2NOP16 nucleolar protein, pseudogene 296453634964546088Rat
1359670Ndufs1NADH:ubiquinone oxidoreductase core subunit S196454643064579751Rat
1311415Eef1b2eukaryotic translation elongation factor 1 beta 296458016364582737Rat
40960633Snord51small nucleolar RNA, C/D box 5196458173164581808Rat
41148168Snora41small nucleolar RNA, H/ACA box 4196458207064582201Rat
2728Cmklr2chemerin chemokine-like receptor 296458331064617883Rat
1560005Zdbf2zinc finger, DBF-type containing 296467297464748446Rat
2321064Cox5b-ps1cytochrome c oxidase subunit 5B, pseudogene 196479269464793077Rat
1305739Adam23ADAM metallopeptidase domain 2396486264965009718Rat
9235481Fam237afamily with sequence similarity 237 member A96502431265035051Rat
2320917Dytndystrotelin96503737865098549Rat
1307874Mdh1bmalate dehydrogenase 1B96512037065168008Rat
11476915LOC108351941dnaJ homolog subfamily A member 1 pseudogene96516520265166696Rat
1307883Fastkd2FAST kinase domains 296516614865188184Rat
11454381LOC108351943uncharacterized LOC10835194396522571165235289Rat
1588771Cpocarboxypeptidase O96531999665338250Rat
40959969LOC120094803Kruppel like factor 796543368365526372Rat
1306029Klf7KLF transcription factor 796543368365526372Rat
9211165LOC103690543uncharacterized LOC10369054396557369165585909Rat
41094824LOC120094693uncharacterized LOC12009469396559217365596677Rat
2320870Hmga1-ps2high mobility group AT-hook 1, pseudogene 296571420665715579Rat
11396265LOC108351945uncharacterized LOC10835194596575070565758684Rat
9375952LOC103690545small integral membrane protein 7-like96582536165826864Rat
620218Creb1cAMP responsive element binding protein 196590351165972562Rat
7651604Mettl21amethyltransferase 21A, HSPA lysine96593425365999964Rat
41294387LOC120094695uncharacterized LOC12009469596606187866071873Rat
1310683Ccnyl1cyclin Y-like 196607172166121742Rat
631406Fzd5frizzled class receptor 596611309666120276Rat
1307151Plekhm3pleckstrin homology domain containing M396616623366325332Rat
40943289LOC120094696uncharacterized LOC12009469696630022366302108Rat
2423Crygecrystallin, gamma E96642992466432521Rat
7688659LOC102552040uncharacterized LOC10255204096643336666440952Rat
2422Crygdcrystallin, gamma D96644205766443668Rat
2421Crygccrystallin, gamma C96645159166453626Rat
1584991Crygbcrystallin, gamma B96646146066463520Rat
1595217Crygacrystallin, gamma A96648217666484638Rat
41296899Trnap-agg73transfer RNA proline (anticodon AGG) 7396652953766529617Rat
2862Idh1isocitrate dehydrogenase (NADP(+)) 196653414666563703Rat
1592067Pikfyvephosphoinositide kinase, FYVE-type zinc finger containing96656374766657873Rat
620612Pth2rparathyroid hormone 2 receptor96670605066810601Rat
1596909Tcf19-ps1transcription factor 19, pseudogene 196698752466988262Rat
40952034LOC120094967U4 spliceosomal RNA96703546867035644Rat
1586353Crygfcrystallin, gamma F96744826567450429Rat
2323551Srek1-ps1splicing regulatory glutamic acid and lysine rich protein 1, pseudogene 196757132867632585Rat
3044Map2microtubule-associated protein 296772342267981886Rat
1309976Unc80unc-80 homolog, NALCN channel complex subunit96801194068190135Rat
1564890Rperibulose-5-phosphate-3-epimerase96819102768211295Rat
1590799Kansl1lKAT8 regulatory NSL complex subunit 1-like96821115168316992Rat
2011Acadlacyl-CoA dehydrogenase, long chain96833398168372149Rat
41315872LOC120094878U7 small nuclear RNA96836621168366273Rat
41388248LOC120094910small nucleolar RNA SNORA1796838151668381647Rat
1598796Myl1myosin, light chain 196843751468458256Rat
1590798Pum3-ps2pumilio RNA-binding family member 3, pseudogene 296848084668482298Rat
69416Lancl1LanC like glutathione S-transferase 196851505268548646Rat
2395Cps1carbamoyl-phosphate synthase 196861415368737037Rat
40939110LOC120094918small nucleolar RNA SNORA1796875681568756940Rat
620486Erbb4erb-b2 receptor tyrosine kinase 496952373370596743Rat
41176457LOC120094945U6atac minor spliceosomal RNA96986598769866117Rat
41400105LOC120094804uncharacterized LOC12009480496998441869994916Rat
11489282LOC10835200740S ribosomal protein S10 pseudogene97041881470419577Rat
41242467LOC120094697uncharacterized LOC12009469797064431670744273Rat
1562431Pced1bl1PC-esterase domain containing 1B like 197085955470861542Rat
1308686Ikzf2IKAROS family zinc finger 297104603871191296Rat
1565062Spag16sperm associated antigen 1697133300572252772Rat
41136363LOC120094917small nucleolar RNA SNORA1797134573571345862Rat
41009382Got2-ps1glutamic-oxaloacetic transaminase 2, pseudogene 197177349471780853Rat
7527018Tubb4b-ps4tubulin, beta 4B class IVb, pseudogene 497185965971861139Rat
41092498LOC120094902small nucleolar RNA SNORA4897215415872154301Rat
1565501Vwc2lvon Willebrand factor C domain containing 2 like97225279372448543Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10252D7Mit1213693513366635133728Ratregion
10403D9Wox812196647532866475449Ratregion
10404D9Mit219096643705266437242Ratregion
10411D9Mgh413996745134667451485Ratregion
10658D9Wox1518494941569249415876Ratregion
33979D9Mit420494243579742436001Ratregion
34013D9Mit317095816286358163035Ratregion
34090D9Mgh822393684038536840608Ratregion
34286D9Mgh614393145248931452632Ratregion
34413D9Mgh314894077390540774051Ratregion
36147D9Rat1514596538378965383934Ratregion
36388D10Mgh2617994758474747584926Ratregion
37218D9Rat6912096937159569371715Ratregion
37220D9Rat7320194004371240043913Ratregion
37522D9Rat8525096642120366421453Ratregion
37530D9Rat10421694535995545360171Ratregion
35172D9Rat1911696228760862287724Ratregion
37094D9Rat15621296411687264117084Ratregion
37604D9Rat7623293696235936962591Ratregion
37846D9Rat9424593428774534287990Ratregion
36406D9Mgh914196082718760827328Ratregion
36556D9Rat1018997109815771098346Ratregion
36582D9Rat2117994920974149209920Ratregion
34771D9Rat1817996246215362462332Ratregion
34815D9Rat1617996138143461381613Ratregion
34862D9Rat2313495641096256411096Ratregion
35010D9Rat2417994920978849209967Ratregion
35164D9Rat5617293441125234411424Ratregion
35575D9Rat2214195503543555035576Ratregion
35809D9Rat1214696785297367853119Ratregion
35819D9Rat2614794059394440594091Ratregion
35833D9Rat2014895006217650062324Ratregion
35843D9Rat1311196569118865691299Ratregion
39608D9Rat12413294286492442865057Ratregion
39706D9Rat12221995701844457018665Ratregion
39788D9Rat14716093836806738368227Ratregion
39812D9Rat12520394293041942930620Ratregion
39872D9Rat11920895107333651073542Ratregion
39964D9Rat15022493669731836697542Ratregion
38056D9Rat9820595967979959680004Ratregion
38066D9Rat6519896450779964507997Ratregion
38274D9Rat5821593691945736919672Ratregion
40706D9Rat11822996036983760370066Ratregion
40750D9Rat11423397212856572128798Ratregion
38626D2Rat17115096770325867703293Ratregion
38716D9Rat6014794803593448036057Ratregion
40088D9Rat14812693897030038970426Ratregion
40282D9Rat15112593344993933450064Ratregion
40304D9Rat12116695099769550997861Ratregion
38914D9Rat9111993847304738473166Ratregion
39024D9Rat5922593598952735989754Ratregion
39178D9Rat9321295921443459214645Ratregion
39246D9Rat6323794279151342791750Ratregion
39362D9Rat9218694996854649968732Ratregion
39502D9Rat14621697096039070960606Ratregion
42251D9Arb737194292073042921101Ratregion
42885D9Rat15716593742213437422299Ratregion
42887D9Rat17622096660447766604697Ratregion
42888D9Rat17311896757594967576067Ratregion
42889D9Rat17421296984477269844966Ratregion
42890D9Rat17513197116337871163509Ratregion
42891D9Rat17220697107579871076004Ratregion
41514D9Rat11715796346956963469726Ratregion
42359D9Rat19019893923576639235966Ratregion
42360D9Rat18914793958443439584583Ratregion
42361D9Rat18822593953834739538572Ratregion
40888D9Rat12720194077391640774115Ratregion
40896D9Rat11520096940155969401759Ratregion
40916D9Rat12322695815701458157242Ratregion
41088D9Rat12022095314156553141785Ratregion
41554D9Rat11616796432949264329651Ratregion
41772D9Rat15827292753206327532335Ratregion
41890D9Rat19114893650327336503422Ratregion
44552D9Wox2113696750902367509080Ratregion
44576D9Got3915892847733428477492Ratregion
44576D9Got3915892847733428477539Ratregion
44581D9Got3826893148113931481407Ratregion
44582D9Got4312693150332431503450Ratregion
44583D9Got4521793210876432108981Ratregion
44585D9Got4115193222586932226020Ratregion
44586D9Got13219193301164133011832Ratregion
44587D9Got4614093686577336865913Ratregion
44588D9Got4729693830441538304711Ratregion
44590D9Got4416193857550538575638Ratregion
44591D9Got4919694008016640080362Ratregion
44592D9Got4822294011524940115471Ratregion
44593D9Got5028393951597639516259Ratregion
44594D9Got5114494177059141770737Ratregion
44596D9Got5329894405463344054931Ratregion
44599D9Got5211894350314643503264Ratregion
44600D9Got5513594317266343172798Ratregion
44601D9Wox310194565985345659954Ratregion
44602D9Got5818595260444052604625Ratregion
44603D9Wox1424295305993353060173Ratregion
44604D9Got6021295660337256603584Ratregion
44605D9Got5922395654765856547881Ratregion
44606D9Got6213795710749157107628Ratregion
44607D9Got6118795808840058088587Ratregion
44609D9Got6322995996728459967513Ratregion
44610D9Got6420696422914764229355Ratregion
44611D9Got6722396324139963241622Ratregion
44612D9Got6619996313226163132460Ratregion
44614D9Got6916096449669764496857Ratregion
44615D9Got6520296426994164270143Ratregion
44616D9Got6811896542110465421222Ratregion
44617D9Wox425196594175965942010Ratregion
44618D9Got7023296584151565841747Ratregion
44619D9Got7116496623641966236583Ratregion
44620D9Got7319096734105967341249Ratregion
44621D9Got7219896815839068158588Ratregion
44622D9Got7416397017264470172807Ratregion
44623D9Got7821897110716271107380Ratregion
44624D9Got7517697075469770754873Ratregion
44625D9Got7617897072303770723215Ratregion
44626D9Got7714397045995370460096Ratregion
44630D9Got7928597243887272439157Ratregion
60654D9Got13511095889750258897612Ratregion
60654D9Got13511095889750258897772Ratregion
60664D9Got5419394501696345017156Ratregion
60666D9Got5727795411829754118571Ratregion
45516D17Got10816296290804662908187Ratregion
625824D9Got3620392884958728849792Ratregion
61288D9Uia917994249516442495343Ratregion
62512D9Uia218596487016764870352Ratregion
62513D9Uia313896441130964411447Ratregion
62516D9Uia428196207227562072556Ratregion
66388D9Mco1026295367008853670350Ratregion
66417D9Mco139493754075537541153Ratregion
66421D9Mco217895644711656447294Ratregion
66433D9Mco822896435632364356550Ratregion
66549D9Uia730496668938266689686Ratregion
66550D9Uia824795648057156480818Ratregion
67302D9Arb215696526294565263101Ratregion
67305D9Arb838594292072642921111Ratregion
67786D9Uwm214293829996138300103Ratregion
1632116D9Got22715194128937841289529Ratregion
1578967D10Chm4622496829682268297046Ratregion
1578977D10Chm6524196778450967784750Ratregion
1579019D10Chm4530496797999367980297Ratregion
1579108D10Chm6429196798000667980297Ratregion
1627002D9Mco522596435636664356591Ratregion
1627106D9Mco2522894292667042926898Ratregion
1627424D9Mco2620994283101742831226Ratregion
1627488D9Mco322496435636664356590Ratregion
1629188D9Got21117594322459743224774Ratregion
1629282D9Wox1327895723740357237681Ratregion
1638988D9Got23915694929512749295283Ratregion
1639073D9Got24122896118757261187800Ratregion
1639666D9Got2378992987871129878800Ratregion
1640764D9Got23829796443847564438771Ratregion
1640764D9Got23829796443847564438796Ratregion
1640697D9Wox3719094292668742926877Ratregion
1640746D9Got24311392803447328034586Ratregion
1634973D9Got21411893709878637098904Ratregion
1635305D9Wox3522393904047039040693Ratregion
1636264D9Got21720095404582754046027Ratregion
1636311D9Got23327893746477037465048Ratregion
1637738D9Got22824493014382730144071Ratregion
1633843D9Wox308796798123167981318Ratregion
2302881D9Mco7324895068715250687400Ratregion
2302903D9Mco7924195718945557189696Ratregion
2302905D9Mco7220794790220847902417Ratregion
2302909D9Mco8019495740292457403118Ratregion
2302913D9Mco7621695662771356627933Ratregion
2302929D9Mco7817395689781656897989Ratregion
2302939D9Mco8119195750480057504991Ratregion
2302957D9Mco7417792880656328806740Ratregion
2302963D9Mco7717995677711256777289Ratregion
2302967D9Mco7521495652412256524338Ratregion
7205944Pou3f140094494689844947298Ratregion
7205990UniSTS:53130771694738401147384727Ratregion
7206016Nrp26796413894664139013Ratregion
7206036Bnip322294876389648764118Ratregion
7205782D2S34093493510947435110408Ratregion
7193091AA89324916496653388966534053Ratregion
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5505167Il18rap47194279787142798342Ratregion
5506100UniSTS:49835814595530820455308349Ratregion
5506111UniSTS:49839616396423779864237961Ratregion
5506138Satb28195834834558348426Ratregion
5506717ACADL12696836261168362737Ratregion
5506881G4720226693997422639974492Ratregion
5506975fc48d10.y146793627977436280241Ratregion
5499561AI8525619695013848050138576Ratregion
5501782MARC_12193-12194:1004713732:141594906312949063544Ratregion
5500312GDB:18123832494740919847410233Ratregion
5499699UniSTS:2341159694232503642325132Ratregion
5499701UniSTS:23414410496610655166106655Ratregion
5504151UniSTS:25920328796646157066463204Ratregion
5504692PMC55400P265996653662266537280Ratregion
5501960MARC_21133-21134:1025201105:194196375744463758385Ratregion
5505524G1938913394526337645263509Ratregion
5502335RH12454922394985184049852063Ratregion
55027409STS0113993297052732970666Ratregion
5502762TBC1D833294165315041653482Ratregion
5502790GDF819094845411048454300Ratregion
5502879Fzd5096611907666120205Ratregion
5502885Gls86494941458549415449Ratregion
5502247AA79289324696043254560432792Ratregion
5502473RH1249838293839391038393992Ratregion
6903883D9Mco10323795047329250473531Ratregion
6903886D9Mco10420095217623152176433Ratregion
6903888D9Mco10521395228303952283252Ratregion
6903890D9Mco10621595318488153185096Ratregion
6903892D9Mco10723096152910161529521Ratregion
6903892D9Mco10723096152929161529521Ratregion
6903894D9Mco10816496680517166805335Ratregion
6903896D9Mco10919196701993467020125Ratregion
Position Markers

Peak: (D9Rat92)
Rat AssemblyChrPosition (strand)Source
GRCr8957,460,497 - 57,460,683 (+)Marker Load Pipeline
mRatBN7.2949,968,546 - 49,968,732 (+)MAPPER
Rnor_6.0954,885,041 - 54,885,226NCBI
Rnor_5.0954,591,357 - 54,591,542UniSTS
RGSC_v3.4947,035,692 - 47,035,878RGD
RGSC_v3.4947,035,693 - 47,035,878UniSTS
RGSC_v3.1947,037,106 - 47,037,292RGD
Celera947,615,598 - 47,615,783UniSTS
SHRSP x BN Map941.0298UniSTS
SHRSP x BN Map941.0298RGD
FHH x ACI Map935.67RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)92375402458157242Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)94996854671098346Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
724543Cm20Cardiac mass QTL 203.9heart mass (VT:0007028)calculated heart weight (CMO:0000073)91696139840594091Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1578659Tspe1Trichinella spiralis expulsion QTL 14.8parasite quantity (VT:0010441)logarithm of the intestinal adult Trichinella spiralis count (CMO:0002024)96138143465691299Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)92746863972468639Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95584784177026453Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
6903937Bp356Blood pressure QTL 3560.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94790220852283252Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)95662771378595166Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
1598823Memor16Memory QTL 161.9exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)92213332249968732Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general number of animals used: 70 days old 363 F2 rats, second study: 450 rats inducing agent: intraperitoneal administration of alcohol 3.5 g/kg 1334439
qtl_general region not confirmed by the second study 1600610
qtl_general measurement method: specific binding of high-affinity neurotensin receptor (NTR1) was done with high concentration of NT in the presence of levocabastine a selective blocker for low affinity NT 1334439
qtl_general software package used: Map Manager QTX Likelihood Ratio was higher in males 1334439
qtl_statistics Likelihood Ratio: 14.9 1334439