Scl57 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Scl57 (Serum cholesterol level QTL 57) Rattus norvegicus

Symbol: Scl57
Name: Serum cholesterol level QTL 57
RGD ID: 2290450
Previously known as: Total cholesterol QTL 9; TC-9
Trait: blood cholesterol amount   (VT:0000180)    
Measurement Type: plasma total cholesterol level   (CMO:0000585)    
LOD Score: 4.15
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2936,962,359 - 95,410,867RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0941,261,034 - 102,531,865RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0940,929,725 - 102,148,004RGDRnor5.0
RGSC_v3.4933,496,794 - 94,217,673RGDRGSC3.4
RGSC_v3.1933,498,209 - 94,427,153RGD
Cross Type: intercross
Strains Crossed: SR/JrHsd SS-Tg(ApoC3-CETP)53Opaz 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Genome-wide scan for interacting loci affecting human cholesteryl ester transfer protein-induced hypercholesterolemia in transgenic human cholesteryl ester transfer protein F2-intercross rats. Herrera VL, etal., J Hypertens. 2007 Aug;25(8):1608-12.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1586179Arhgef4Rho guanine nucleotide exchange factor 493686180037005079Rat
1583985Fam168bfamily with sequence similarity 168, member B93700556937038631Rat
41242603LOC120094662uncharacterized LOC12009466293703746337047132Rat
1310954Plekhb2pleckstrin homology domain containing B293704958037082231Rat
41119832LOC120094916U1 spliceosomal RNA93707511237075272Rat
1560533Rps14-ps2ribosomal protein S14, pseudogene 293715329037153723Rat
41107238LOC120094913small nucleolar RNA SNORA1793733515037335272Rat
41333059LOC120094922small nucleolar RNA SNORA1793733552637335650Rat
41290364LOC120094862U6 spliceosomal RNA93796214137962247Rat
41190690LOC120094844uncharacterized LOC12009484493803119438033635Rat
41024403LOC120094664uncharacterized LOC12009466493812136838165876Rat
41096174LOC120094665uncharacterized LOC12009466593813057338137099Rat
6484877Hdac1-ps10Histone deacetylase 1, pseudogene 1093817277738173577Rat
1309218Hs6st1heparan sulfate 6-O-sulfotransferase 193828350238322684Rat
619710Uggt1UDP-glucose glycoprotein glucosyltransferase 193835522938468473Rat
6501582LOC100909803uncharacterized LOC10090980393848109638488323Rat
1359633Neurl3neuralized E3 ubiquitin protein ligase 393849448638503352Rat
7500673LOC102554222uncharacterized LOC10255422293850255338512621Rat
1311041Arid5aAT-rich interaction domain 5A93853461238549467Rat
1309220Kansl3KAT8 regulatory NSL complex subunit 393856217038605757Rat
1583681Fer1l5fer-1-like family member 593860583538661869Rat
1311393Lman2llectin, mannose-binding 2-like93866170938685244Rat
1305571Cnnm4cyclin and CBS domain divalent metal cation transport mediator 493871172638750942Rat
1307926Cnnm3cyclin and CBS domain divalent metal cation transport mediator 393875537438770740Rat
1310398Ankrd23ankyrin repeat domain 2393877323438778705Rat
1559504Ankrd39ankyrin repeat domain 3993878029138790177Rat
1562837Sema4csemaphorin 4C93879166838802171Rat
1564591Fam178bfamily with sequence similarity 178, member B93880586438913681Rat
41115964LOC120094668uncharacterized LOC12009466893891376938918495Rat
620608Cox5bcytochrome c oxidase subunit 5B93892198038923806Rat
1307380Actr1bactin related protein 1B93892881938938483Rat
6501168C9h2orf92similar to human chromosome 2 open reading frame 9293894392738984878Rat
41036328LOC120094966U4 spliceosomal RNA93898235938982474Rat
3983Zap70zeta chain of T cell receptor associated protein kinase 7093898975039011701Rat
1309266Tmem131transmembrane protein 13193901647039162841Rat
1562560Vwa3bvon Willebrand factor A domain containing 3B93924952339419614Rat
41312543Trnaa-agc41transfer RNA alanine (anticodon AGC) 4193930165739301729Rat
7728653LOC102554996uncharacterized LOC10255499693933222239334749Rat
70948Cnga3cyclic nucleotide gated channel subunit alpha 393944753439494044Rat
68386Inpp4ainositol polyphosphate-4-phosphatase type I A93952824539650574Rat
1565095Coa5cytochrome C oxidase assembly factor 593965145939664870Rat
621749Unc50unc-50 inner nuclear membrane RNA binding protein93966494439674369Rat
1305650Mgat4aalpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A93967342739786747Rat
41360059LOC120094669uncharacterized LOC12009466993969766939727620Rat
1310819CracdlCRACD like93983432139950763Rat
41240104LOC120094963U2 spliceosomal RNA93993229239932472Rat
621142Tsga10testis specific 1093999120340098259Rat
1310276Lipt1lipoyltransferase 194010793840118268Rat
1307700Mitd1microtubule interacting and trafficking domain containing 194011394340125280Rat
1308196Mrpl30mitochondrial ribosomal protein L3094012535240136189Rat
6496811Lyg2lysozyme G294014114440150821Rat
1560332Lyg1lysozyme G194017112340182869Rat
708355Txndc9thioredoxin domain containing 994021181840221953Rat
735017Eif5beukaryotic translation initiation factor 5B94022276940277482Rat
1306715Rev1REV1, DNA directed polymerase94027810040351764Rat
1308527Aff3ALF transcription elongation factor 394039909940856716Rat
40935687Trnat-agu33transfer RNA threonine (anticodon AGU) 3394043234540432425Rat
41163881LOC120094904small nucleolar RNA SNORA4894092276640922908Rat
1562137Lonrf2LON peptidase N-terminal domain and ring finger 294103312541070551Rat
621216Chst10carbohydrate sulfotransferase 1094109280541122737Rat
41038988LOC120094971U6 spliceosomal RNA94112322841123334Rat
1359122NMSneuromedin S94116963441180697Rat
1309663Pdcl3phosducin-like 394123432241243769Rat
11451021Sec61gl4SEC61 translocon subunit gamma like 494130267341303608Rat
11443911LOC108352023uncharacterized LOC10835202394130423141307924Rat
41361104LOC120094670uncharacterized LOC12009467094139821741414897Rat
1309681Npas2neuronal PAS domain protein 294146336141642322Rat
41277081LOC120094671uncharacterized LOC12009467194147413741475046Rat
621202Rpl31ribosomal protein L3194164739741651441Rat
1595491Tbc1d8TBC1 domain family, member 894165139441761432Rat
1560909Cnot11CCR4-NOT transcription complex, subunit 1194181492341824626Rat
1308460Rnf149ring finger protein 14994182682541854381Rat
41016240Snord89small nucleolar RNA, C/D box 8994182797241828086Rat
41130776Rnf149-ps2ring finger protein 149, pseudogene 294182906241830546Rat
1564056Creg2cellular repressor of E1A-stimulated genes 294187200041945413Rat
41098019LOC120094921small nucleolar RNA SNORA1794192134041921468Rat
1560724Rfx8regulatory factor X894195758942021432Rat
11433865LOC108351918uncharacterized LOC10835191894202017642025870Rat
41093670LOC120094674uncharacterized LOC12009467494211183542117297Rat
2321066Cox6a1-ps2cytochrome c oxidase subunit 6A1, pseudogene 294216974742170079Rat
1305322Map4k4mitogen-activated protein kinase kinase kinase kinase 494220070842326708Rat
621147Il1r2interleukin 1 receptor type 294238428042424726Rat
41272762LOC120094675uncharacterized LOC12009467594246667042468248Rat
1564447H3f3al3H3.3 histone A like 394249400742495112Rat
2892Il1r1interleukin 1 receptor type 194250491742580958Rat
621782Il1rl2interleukin 1 receptor-like 294259165842639351Rat
2894Il1rl1interleukin 1 receptor-like 194266169442727266Rat
1308589Il18r1interleukin 18 receptor 194272741642760971Rat
727867Il18rapinterleukin 18 receptor accessory protein94276811242800964Rat
3721Slc9a4solute carrier family 9 member A494282533442879729Rat
3719Slc9a2solute carrier family 9 member A294293200143014447Rat
9295055LOC103690525uncharacterized LOC10369052594293496542943357Rat
1562212Mfsd9major facilitator superfamily domain containing 994301961143039100Rat
1563696Tmem182transmembrane protein 18294305943243111318Rat
41288307LOC120094676uncharacterized LOC12009467694311709643119324Rat
6499281LOC100910304uncharacterized LOC10091030494345148443528710Rat
11495887LOC108352024uncharacterized LOC10835202494358788243617987Rat
2320919Rps8-ps5ribosomal protein S8, pseudogene 594372584043726444Rat
7613346LOC102549950uncharacterized LOC10254995094373934443744575Rat
11452400LOC108351921uncharacterized LOC10835192194395688644145114Rat
11382578LOC108352025uncharacterized LOC10835202594417329344246711Rat
41003253LOC120094677uncharacterized LOC12009467794452142544577442Rat
41006317LOC120094678uncharacterized LOC12009467894459919444629263Rat
1562818Rpl35-ps10ribosomal protein L35, pseudogene 1094487377244874628Rat
7688151Pantr1POU3F3 adjacent non-coding transcript 194489833844943631Rat
619768Pou3f3POU class 3 homeobox 394494587244948998Rat
9182814LOC103690528uncharacterized LOC10369052894497453944981088Rat
1306558Mrps9mitochondrial ribosomal protein S994511355445172375Rat
41053977LOC120094930small nucleolar RNA SNORA1794512781245127930Rat
1306253Gpr45G protein-coupled receptor 4594522136445309713Rat
40944792Hnrnpa1-ps34heterogeneous nuclear ribonucleoprotein A1, pseudogene 3494524630645247422Rat
1560362Arpc5l-ps1actin related protein 2/3 complex, subunit 5-like, pseudogene 194526335245264349Rat
1310772Tgfbrap1transforming growth factor, beta receptor associated protein 194532097545371329Rat
1310553C9h2orf49similar to human chromosome 2 open reading frame 4994537139645382123Rat
61963Fhl2four and a half LIM domains 294538897945462421Rat
11472363LOC108351922thymosin beta-10 pseudogene94554465545544831Rat
1592054Hsp90ab1-ps13heat shock protein 90 alpha family class B member 1, pseudogene 1394554506345547427Rat
41019548LOC120094961U2 spliceosomal RNA94558722445587387Rat
1305965Nck2NCK adaptor protein 294571397945840330Rat
1560806Golph3l-ps1golgi phosphoprotein 3-like, pseudogene 194589049245891363Rat
1305645Ecrg4ECRG4 augurin precursor94599295446012605Rat
41147243Mrpl30-ps7mitochondrial ribosomal protein L30, pseudogene 794603925946045901Rat
621584Tpp2tripeptidyl peptidase 294604671246128157Rat
41332032LOC120094976U6 spliceosomal RNA94606065646060762Rat
1561425Mettl21cmethyltransferase 21C, AARS1 lysine94613045146145128Rat
1586177Dnajc14-ps2DnaJ heat shock protein family (Hsp40) member C14, pseudogene 294617746346179852Rat
7680407Ccdc168coiled-coil domain containing 16894619823446236325Rat
1309095Tex30testis expressed 3094624341646252273Rat
1304684Poglut2protein O-glucosyltransferase 294625638846268714Rat
1311888Bivmbasic, immunoglobulin-like variable motif containing94626875846305038Rat
1586176Ercc5ERCC excision repair 5, endonuclease94630947746354478Rat
1596736Mettl21cl1methyltransferase like 21C-like 194638214146397299Rat
1562067Cdca3l1cell division cycle associated 3 like 194650653346507525Rat
1306380Gulp1GULP PTB domain containing engulfment adaptor 194662269946899005Rat
41128029LOC120094972U6 spliceosomal RNA94688023246880338Rat
1590772Hspd1-ps13heat shock protein family D (Hsp60) member 1, pseudogene 1394699145746996798Rat
1595408Ahcy-ps5adenosylhomocysteinase, pseudogene 594702399047025181Rat
1584383Rps3-ps8ribosomal protein S3, pseudogene 894711540647116385Rat
71029Col3a1collagen type III alpha 1 chain94737461147410547Rat
70921Col5a2collagen type V alpha 2 chain94744874147598134Rat
41220839LOC120094964U2 spliceosomal RNA94757283347572962Rat
1562143Ctps1-ps2CTP synthase 1, pseudogene 294780217747803574Rat
1564869Wdr75WD repeat domain 7594790321447933399Rat
2323350Got2-ps3glutamic-oxaloacetic transaminase 2, pseudogene 394799538648000701Rat
620180Slc40a1solute carrier family 40 member 194803352648053876Rat
1597774Plp2l1proteolipid protein 2 like 194807677548077809Rat
41174017AsdurfASNSD1 upstream open reading frame94812680848136134Rat
1306332Asnsd1asparagine synthetase domain containing 194812680848139073Rat
1561071Ankarankyrin and armadillo repeat containing94814153448215400Rat
1305575Osgepl1O-sialoglycoprotein endopeptidase-like 194821499548229440Rat
1359511Pms1PMS1 homolog 1, mismatch repair system component94822940348340237Rat
2300146Ormdl1ORMDL sphingolipid biosynthesis regulator 194824336548253316Rat
41298570LOC120094923small nucleolar RNA SNORA1794839195548392087Rat
3115Mstnmyostatin94845253348458933Rat
1595308Smc6-ps1structural maintenance of chromosomes 6, pseudogene 194852114648522274Rat
1596493C9h2orf88similar to human chromosome 2 open reading frame 8894853914048584882Rat
6486560Srsf7-ps4serine and arginine rich splicing factor 7, pseudogene 494858786548589638Rat
1308392Hibch3-hydroxyisobutyryl-CoA hydrolase94859009748669896Rat
1306071Inpp1inositol polyphosphate-1-phosphatase94868803748717793Rat
1596442Pgap2-ps2post-GPI attachment to proteins 2, pseudogene 294874157148760802Rat
1565371Bnip3-ps1BCL2 interacting protein 3, pseudogene 194876280448764417Rat
1562317Mfsd6major facilitator superfamily domain containing 694877317148858471Rat
1560421Nemp2nuclear envelope integral membrane protein 294886125248880565Rat
70882Nab1Ngfi-A binding protein 194905357949093078Rat
11474459LOC108352026high mobility group protein B1 pseudogene94921481949215542Rat
11444870LOC108351925glyceraldehyde-3-phosphate dehydrogenase pseudogene94927239849273479Rat
2707Glsglutaminase94934461649416900Rat
3771Stat1signal transducer and activator of transcription 194941956149459969Rat
1305747Stat4signal transducer and activator of transcription 494947266049588540Rat
9346435LOC103690550uncharacterized LOC10369055094968777449689862Rat
70994Myo1bmyosin Ib94969004349852373Rat
11365277Tmsb10l3thymosin beta 10 like 394997482349975501Rat
1306658Nabp1nucleic acid binding protein 195009855250133982Rat
41074009Trnaa-agc29transfer RNA alanine (anticodon AGC) 2995010982550109905Rat
41015968LOC120094683uncharacterized LOC12009468395017283950187261Rat
1359345Cavin2caveolae associated protein 295030207950314096Rat
41300716LOC120094969U4 spliceosomal RNA95031778850317913Rat
41107517LOC120094903small nucleolar RNA SNORA4895032157750321728Rat
41234631LOC120094970U6 spliceosomal RNA95042574950425855Rat
1308839Tmeff2transmembrane protein with EGF-like and two follistatin-like domains 295044594750733473Rat
11362092LOC108351929uncharacterized LOC10835192995048922750559755Rat
7543919Npm1-ps7nucleophosmin 1, pseudogene 795056244350587615Rat
7640284Aasdhppt-ps1aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase, pseudogene 195073524950746852Rat
41096178Rps7-ps13ribosomal protein S7, pseudogene 1395087190650872667Rat
2323836Ccdc126-ps1coiled-coil domain containing 126, pseudogene 195124491251245507Rat
1591348Mettl6-ps1methyltransferase like 6, pseudogene 195151474651515605Rat
11446793LOC10835202740S ribosomal protein S28-like95151597051516251Rat
41180480LOC120094929small nucleolar RNA SNORA1795209028852090429Rat
2323675Cyb5d1-ps1cytochrome b5 domain containing 1, pseudogene 195240881552409577Rat
40976196LOC120094959U2 spliceosomal RNA95257495452575147Rat
2323628Tmem19-ps1transmembrane protein 19, pseudogene 195275207852753081Rat
41327220LOC120094983U6 spliceosomal RNA95303196253032064Rat
1590771Nono-ps13non-POU domain containing, octamer-binding, pseudogene 1395304950253055409Rat
2323511Cct6a-ps16chaperonin containing TCP1 subunit 6A, pseudogene 1695325090653252183Rat
1590806Cct6a-ps1chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 195333839953339815Rat
41123000LOC120094847uncharacterized LOC12009484795398840053993546Rat
1590805Clip1-ps1CAP-GLY domain containing linker protein 1, pseudogene 195409906354102686Rat
6498974Nelfe-ps1negative elongation factor complex member E, pseudogene 195422936854231747Rat
2318998Cacybp-ps1calcyclin binding protein, pseudogene 195431312554313795Rat
1587872Pals1-ps1protein associated with LIN7 1, MAGUK p55 family member, pseudogene 195450025654502541Rat
1590804Eno1-ps2enolase 1, pseudogene 295473030254750752Rat
1307321Slc39a10solute carrier family 39 member 1095483684154960325Rat
40971008LOC120094685uncharacterized LOC12009468595484227554876577Rat
621798Dnah7dynein, axonemal, heavy chain 795496023555266529Rat
620457Stk17bserine/threonine kinase 17b95530748555338085Rat
41049662LOC120094686uncharacterized LOC12009468695533793455363100Rat
1593244Hecw2HECT, C2 and WW domain containing E3 ubiquitin protein ligase 295535946255753106Rat
1304775Ccdc150coiled-coil domain containing 15095579354455897341Rat
11383155Rpl31l12ribosomal protein L31 like 1295583391155834622Rat
1309185Gtf3c3general transcription factor IIIC subunit 395588225255943037Rat
1586666C9h2orf66similar to human chromosome 2 open reading frame 6695594580655949855Rat
1303213Pgap1post-GPI attachment to proteins inositol deacylase 195597557456044325Rat
1561893Ankrd44ankyrin repeat domain 4495612674656427661Rat
11391487LOC108351932uncharacterized LOC10835193295632554556333506Rat
1586604Tmem258btransmembrane protein 258 B95645037356450755Rat
1590803Rpl11-ps6ribosomal protein L11, pseudogene 695646902356469614Rat
620148Sf3b1splicing factor 3b, subunit 195649240356532300Rat
1359509Coq10bcoenzyme Q10B95655375156573671Rat
621314Hspd1heat shock protein family D (Hsp60) member 195657919556590011Rat
2844Hspe1heat shock protein family E (Hsp10) member 195658991256593000Rat
620183Mob4MOB family member 4, phocein95661737456641336Rat
9179481LOC103690547glycine cleavage system H protein, mitochondrial pseudogene95663505656636545Rat
1307304Rftn2raftlin family member 295665161756707830Rat
1311527Mars2methionyl-tRNA synthetase 2, mitochondrial95672040856729991Rat
1559527Bollboule homolog, RNA binding protein95673489056859917Rat
708420Plcl1phospholipase C-like 195690157357238782Rat
41125672LOC120094794uncharacterized LOC12009479495690850256915395Rat
11390134LOC108351933uncharacterized LOC10835193395707161657113442Rat
11468746LOC108352000glyceraldehyde-3-phosphate dehydrogenase pseudogene95808334958084426Rat
1311885Hsfy2heat shock transcription factor, Y linked 295818241558183828Rat
1562369Satb2SATB homeobox 295834802758534256Rat
41377830LOC120094880U7 small nuclear RNA95842251458422570Rat
7574954LOC102549320uncharacterized LOC10254932095852723658603337Rat
41273883LOC120094688uncharacterized LOC12009468895889810858899892Rat
7505088LOC102549484uncharacterized LOC10254948495889970458949945Rat
1306941C9h2orf69similar to human chromosome 2 open reading frame 6995894982158958456Rat
1311269Tyw5tRNA-yW synthesizing protein 595896110058979188Rat
1303159Maip1matrix AAA peptidase interacting protein 195897890158986831Rat
41313489LOC120094912small nucleolar RNA SNORA1795899507858995205Rat
1590802Rpl6-ps7ribosomal protein L6, pseudogene 795908227059083124Rat
11493513LOC108351935uncharacterized LOC10835193595910533959149851Rat
1309930Spats2lspermatogenesis associated, serine-rich 2-like95931994959493864Rat
41260367LOC120094689uncharacterized LOC12009468995934920359351098Rat
11470202LOC10835193660S ribosomal protein L30-like95935380059354253Rat
1564820Kctd18potassium channel tetramerization domain containing 1895950222059566857Rat
41052886LOC120094872U6 spliceosomal RNA95954434359544444Rat
1308450Sgo2shugoshin 295954860559573229Rat
620528Aox1aldehyde oxidase 195957962159658772Rat
41096022LOC120094690uncharacterized LOC12009469095965508059658278Rat
1359328Aox3aldehyde oxidase 395966478459749701Rat
41013560LOC120094932small nucleolar RNA SNORA1795970150259701601Rat
41034877Ptp4a1-ps5protein tyrosine phosphatase 4A1, pseudogene 595973618059736701Rat
1311975Aox4aldehyde oxidase 495976123859818169Rat
11403437Rpl21l4ribosomal protein L21 like 495982107659823671Rat
1359668Aox2aldehyde oxidase 295982840359916175Rat
9134966LOC103690538uncharacterized LOC10369053895988788859901999Rat
735129Bzw1basic leucine zipper and W2 domains 195993067259944468Rat
1311469Clk1CDC-like kinase 195994777459959002Rat
631415Ppil3peptidylprolyl isomerase like 395996640559980147Rat
1310329Nif3l1NGG1 interacting factor 3 like 195998010160001490Rat
41352736LOC120094958U2 spliceosomal RNA95998629659986483Rat
1311844Orc2origin recognition complex, subunit 296000163160038301Rat
1309752Hycc2hyccin PI4KA lipid kinase complex subunit 296005688360129176Rat
7709066Banf1-ps3BAF nuclear assembly factor 1, pseudogene 396009990260100455Rat
1310737Ndufb3NADH:ubiquinone oxidoreductase subunit B396012924060139452Rat
620847CflarCASP8 and FADD-like apoptosis regulator96018533860236173Rat
6501057LOC100909946uncharacterized LOC10090994696019500760199453Rat
620945Casp8caspase 896026386360312542Rat
1359362Flacc1flagellum associated containing coiled-coil domains 196031558160343692Rat
41185075LOC120094796uncharacterized LOC12009479696034380860368188Rat
620915Trak2trafficking kinesin protein 296034853160414036Rat
1559449StradbSTE20 related adaptor beta96041418260433084Rat
41344301Trnav-aac15transfer RNA valine (anticodon AAC) 1596041537860415450Rat
1565450C2cd6C2 calcium dependent domain containing 696043492660530842Rat
41076818LOC120094795uncharacterized LOC12009479596045159160485960Rat
41122244LOC120094911small nucleolar RNA SNORA1796050905460509188Rat
1306705Tmem237transmembrane protein 23796053334860569253Rat
620016Mpp4MAGUK p55 scaffold protein 496056973460613035Rat
40979013LOC120094797mitochondrial intermembrane space import and assembly protein 40-like96058484160585260Rat
1310372Als2alsin Rho guanine nucleotide exchange factor ALS296061318260686394Rat
1562399Rps2-ps15ribosomal protein S2, pseudogene 1596069961560700505Rat
1306205Cdk15cyclin-dependent kinase 1596071078760803638Rat
41261015LOC120094798uncharacterized LOC12009479896090520160907409Rat
41189416LOC120094799uncharacterized LOC12009479996091928260922015Rat
2321905Fzd7frizzled class receptor 796093143360934252Rat
1562029Kiaa2012KIAA2012 homolog96096739861076596Rat
1306919Sumo1small ubiquitin-like modifier 196107879061108697Rat
1596173Set-ps16Set nuclear proto-oncogene, pseudogene 1696110895261113900Rat
620484Nop58NOP58 ribonucleoprotein96112093961144810Rat
41058289LOC120094899small nucleolar RNA SNORA4896112427761124421Rat
41160946Snord70small nucleolar RNA, C/D box 7096112597461126060Rat
40961944Snord70bsmall nucleolar RNA, C/D box 70B96112674561126828Rat
41128145Snord11bsmall nucleolar RNA, C/D box 11B96113716861137247Rat
41004670Snord11small nucleolar RNA, C/D box 1196113771561137798Rat
71082Bmpr2bone morphogenetic protein receptor type 296119271861307280Rat
1564239Dbi-ps3diazepam binding inhibitor, acyl-CoA binding protein, pseudogene 396133652861336927Rat
1307676Fam117bfamily with sequence similarity 117, member B96134028461418531Rat
41278460LOC120094801uncharacterized LOC12009480196139447061398897Rat
735110Ica1lislet cell autoantigen 1-like96141095961469884Rat
735072Wdr12WD repeat domain 1296147549861502762Rat
1306822Carfcalcium responsive transcription factor96150236861552433Rat
1594799Nbeal1neurobeachin-like 196157515461743896Rat
41335151Atp5mc2-ps1ATP synthase membrane subunit c locus 2, pseudogene 196174626061746688Rat
735221Cyp20a1cytochrome P450, family 20, subfamily a, polypeptide 196175580461805123Rat
628771Abi2abl-interactor 296182718661905703Rat
1308387Raph1Ras association (RalGDS/AF-6) and pleckstrin homology domains 196190747661990170Rat
7736852LOC102547711uncharacterized LOC10254771196204614362050985Rat
41364019LOC120094895small nucleolar RNA SNORA5196209395062094058Rat
41235983LOC120094692uncharacterized LOC12009469296214346762149952Rat
2299Cd28Cd28 molecule96216632462194674Rat
61975Ctla4cytotoxic T-lymphocyte-associated protein 496231887462325978Rat
620123Icosinducible T-cell co-stimulator96236807562406900Rat
1590313Psma7-ps3proteasome 20S subunit alpha 7, pseudogene 396241270962415587Rat
11385622LOC108351940uncharacterized LOC10835194096244344262466139Rat
7595922LOC102548093uncharacterized LOC10254809396275091462757597Rat
1593480Paics-ps7phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 796290127462922952Rat
1584992Pard3bpar-3 family cell polarity regulator beta96303843564067178Rat
621442Nrp2neuropilin 296412281564238007Rat
7626358LOC102548410uncharacterized LOC10254841096438316264410799Rat
2321317Rpl37-ps5ribosomal protein L37, pseudogene 596441747564417847Rat
41384701LOC120094933small nucleolar RNA SNORA1796443688164436969Rat
1304808Ino80dINO80 complex subunit D96444707564514013Rat
7594970Nop16-ps2NOP16 nucleolar protein, pseudogene 296453634964546088Rat
1359670Ndufs1NADH:ubiquinone oxidoreductase core subunit S196454643064579751Rat
1311415Eef1b2eukaryotic translation elongation factor 1 beta 296458016364582737Rat
40960633Snord51small nucleolar RNA, C/D box 5196458173164581808Rat
41148168Snora41small nucleolar RNA, H/ACA box 4196458207064582201Rat
2728Cmklr2chemerin chemokine-like receptor 296458331064617883Rat
1560005Zdbf2zinc finger, DBF-type containing 296467297464748446Rat
2321064Cox5b-ps1cytochrome c oxidase subunit 5B, pseudogene 196479269464793077Rat
1305739Adam23ADAM metallopeptidase domain 2396486264965009718Rat
9235481Fam237afamily with sequence similarity 237 member A96502431265035051Rat
2320917Dytndystrotelin96503737865098549Rat
1307874Mdh1bmalate dehydrogenase 1B96512037065168008Rat
11476915LOC108351941dnaJ homolog subfamily A member 1 pseudogene96516520265166696Rat
1307883Fastkd2FAST kinase domains 296516614865188184Rat
11454381LOC108351943uncharacterized LOC10835194396522571165235289Rat
1588771Cpocarboxypeptidase O96531999665338250Rat
40959969LOC120094803Kruppel like factor 796543368365526372Rat
1306029Klf7KLF transcription factor 796543368365526372Rat
9211165LOC103690543uncharacterized LOC10369054396557369165585909Rat
41094824LOC120094693uncharacterized LOC12009469396559217365596677Rat
2320870Hmga1-ps2high mobility group AT-hook 1, pseudogene 296571420665715579Rat
11396265LOC108351945uncharacterized LOC10835194596575070565758684Rat
9375952LOC103690545small integral membrane protein 7-like96582536165826864Rat
620218Creb1cAMP responsive element binding protein 196590351165972562Rat
7651604Mettl21amethyltransferase 21A, HSPA lysine96593425365999964Rat
41294387LOC120094695uncharacterized LOC12009469596606187866071873Rat
1310683Ccnyl1cyclin Y-like 196607172166121742Rat
631406Fzd5frizzled class receptor 596611309666120276Rat
1307151Plekhm3pleckstrin homology domain containing M396616623366325332Rat
40943289LOC120094696uncharacterized LOC12009469696630022366302108Rat
2423Crygecrystallin, gamma E96642992466432521Rat
7688659LOC102552040uncharacterized LOC10255204096643336666440952Rat
2422Crygdcrystallin, gamma D96644205766443668Rat
2421Crygccrystallin, gamma C96645159166453626Rat
1584991Crygbcrystallin, gamma B96646146066463520Rat
1595217Crygacrystallin, gamma A96648217666484638Rat
41296899Trnap-agg73transfer RNA proline (anticodon AGG) 7396652953766529617Rat
2862Idh1isocitrate dehydrogenase (NADP(+)) 196653414666563703Rat
1592067Pikfyvephosphoinositide kinase, FYVE-type zinc finger containing96656374766657873Rat
620612Pth2rparathyroid hormone 2 receptor96670605066810601Rat
1596909Tcf19-ps1transcription factor 19, pseudogene 196698752466988262Rat
40952034LOC120094967U4 spliceosomal RNA96703546867035644Rat
1586353Crygfcrystallin, gamma F96744826567450429Rat
2323551Srek1-ps1splicing regulatory glutamic acid and lysine rich protein 1, pseudogene 196757132867632585Rat
3044Map2microtubule-associated protein 296772342267981886Rat
1309976Unc80unc-80 homolog, NALCN channel complex subunit96801194068190135Rat
1564890Rperibulose-5-phosphate-3-epimerase96819102768211295Rat
1590799Kansl1lKAT8 regulatory NSL complex subunit 1-like96821115168316992Rat
2011Acadlacyl-CoA dehydrogenase, long chain96833398168372149Rat
41315872LOC120094878U7 small nuclear RNA96836621168366273Rat
41388248LOC120094910small nucleolar RNA SNORA1796838151668381647Rat
1598796Myl1myosin, light chain 196843751468458256Rat
1590798Pum3-ps2pumilio RNA-binding family member 3, pseudogene 296848084668482298Rat
69416Lancl1LanC like glutathione S-transferase 196851505268548646Rat
2395Cps1carbamoyl-phosphate synthase 196861415368737037Rat
40939110LOC120094918small nucleolar RNA SNORA1796875681568756940Rat
620486Erbb4erb-b2 receptor tyrosine kinase 496952373370596743Rat
41176457LOC120094945U6atac minor spliceosomal RNA96986598769866117Rat
41400105LOC120094804uncharacterized LOC12009480496998441869994916Rat
11489282LOC10835200740S ribosomal protein S10 pseudogene97041881470419577Rat
41242467LOC120094697uncharacterized LOC12009469797064431670744273Rat
1562431Pced1bl1PC-esterase domain containing 1B like 197085955470861542Rat
1308686Ikzf2IKAROS family zinc finger 297104603871191296Rat
1565062Spag16sperm associated antigen 1697133300572252772Rat
41136363LOC120094917small nucleolar RNA SNORA1797134573571345862Rat
41009382Got2-ps1glutamic-oxaloacetic transaminase 2, pseudogene 197177349471780853Rat
7527018Tubb4b-ps4tubulin, beta 4B class IVb, pseudogene 497185965971861139Rat
41092498LOC120094902small nucleolar RNA SNORA4897215415872154301Rat
1565501Vwc2lvon Willebrand factor C domain containing 2 like97225279372448543Rat
621072Bard1BRCA1 associated RING domain 197261607072694553Rat
41027314LOC120094698uncharacterized LOC12009469897262095572634535Rat
1304586Abca12ATP binding cassette subfamily A member 1297282266172995748Rat
70879Atic5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase97316484673184897Rat
2624Fn1fibronectin 197319604473264695Rat
41139219LOC120094699uncharacterized LOC12009469997326650873283004Rat
7652959LOC102554186uncharacterized LOC10255418697326660673278080Rat
7702950LOC102554284nucleolar protein 56-like97328421273285074Rat
41159026LOC120094960U2 spliceosomal RNA97346505173465140Rat
40935986LOC120094700uncharacterized LOC12009470097352898173537576Rat
7704514LOC102554970uncharacterized LOC10255497097364905473665651Rat
1562333Mregmelanoregulin97378672773842081Rat
41218150LOC120094956U2 spliceosomal RNA97385677373856963Rat
11425109LOC108351947uncharacterized LOC10835194797386997373873989Rat
41294134LOC120094954U2 spliceosomal RNA97387425373874443Rat
40944823LOC120094955U2 spliceosomal RNA97388983873890028Rat
2321037Vdac2-ps1voltage-dependent anion channel 2, pseudogene 197389045073891132Rat
41065706LOC120094957U2 spliceosomal RNA97389401373894203Rat
70925Pecrperoxisomal trans-2-enoyl-CoA reductase97389787773926511Rat
1582820Tmem169transmembrane protein 16997392655373950679Rat
3976Xrcc5X-ray repair cross complementing 597395521674044020Rat
1590797Marchf4membrane associated ring-CH-type finger 497407843774196070Rat
7624990LOC102555358uncharacterized LOC10255535897409316074105239Rat
41314403Cks2-ps4CDC28 protein kinase regulatory subunit 2, pseudogene 497412763674133481Rat
1306134Smarcal1Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 197423971874286156Rat
41274183LOC120094703uncharacterized LOC12009470397428912874292893Rat
2319947Rpl37aribosomal protein L37A97429884374300926Rat
41145026LOC120094849uncharacterized LOC12009484997435520874365786Rat
7694989LOC102547940uncharacterized LOC10254794097437430874378142Rat
2873Igfbp2insulin-like growth factor binding protein 297441557474442945Rat
2876Igfbp5insulin-like growth factor binding protein 597445237174464953Rat
41330207LOC120094704uncharacterized LOC12009470497452946374549684Rat
3884Tnp1transition protein 197459446374595072Rat
7642363LOC102548134uncharacterized LOC10254813497459518174603935Rat
1597333Rps8-ps13ribosomal protein S8, pseudogene 1397466460074685585Rat
7564863LOC102548232uncharacterized LOC10254823297470007674708768Rat
7679868LOC102548321uncharacterized LOC10254832197471261774729921Rat
41012662LOC120094705uncharacterized LOC12009470597472996474742441Rat
41020349Dnajb13-ps1DnaJ heat shock protein family (Hsp40) member B13, pseudogene 197480072574801412Rat
41090859LOC120094706uncharacterized LOC12009470697495780274965568Rat
11356775LOC108351950uncharacterized LOC10835195097496106574971838Rat
727910Pinclpregnancy induced noncoding RNA like97498284974999760Rat
11470012LOC108351952uncharacterized LOC10835195297507989475083779Rat
7648480LOC102554721L-lactate dehydrogenase B chain-like97509364775094902Rat
40950643LOC120094708uncharacterized LOC12009470897519349175225446Rat
40983397LOC120094901small nucleolar RNA SNORA4897531080075310942Rat
68427Tns1tensin 197549188675702853Rat
41102125Rps21-ps7ribosomal protein S21, pseudogene 797564047275640715Rat
1560678Rufy4RUN and FYVE domain containing 497570293775727719Rat
2906Cxcr2C-X-C motif chemokine receptor 297572949375735868Rat
2905Cxcr1C-X-C motif chemokine receptor 197576689475771079Rat
9281499LOC103690558uncharacterized LOC10369055897582005675820840Rat
1305848Arpc2actin related protein 2/3 complex, subunit 297582078275851471Rat
631400Gpbar1G protein-coupled bile acid receptor 197586075875863260Rat
1306281Aampangio-associated, migratory cell protein97586338275869188Rat
2300155PnkdPNKD metallo-beta-lactamase domain containing97586862075937126Rat
1359409Tmbim1transmembrane BAX inhibitor motif containing 197587183575889366Rat
1596071Catipciliogenesis associated TTC17 interacting protein97594596075953618Rat
1601463Slc11a1solute carrier family 11 member 197595719375968115Rat
1305629Ctdsp1CTD small phosphatase 197597369475979298Rat
2325394Mir26bmicroRNA 26b97597659675976680Rat
1307048Vil1villin 197599114176018860Rat
2319715Usp37ubiquitin specific peptidase 3797601886376118732Rat
41395376Trnap-agg59transfer RNA proline (anticodon AGG) 5997606777276067852Rat
1311495Cnot9CCR4-NOT transcription complex subunit 997608426976109111Rat
40985578Trnav-aac39transfer RNA valine (anticodon AAC) 3997609924176099313Rat
621025Plcd4phospholipase C, delta 497611552376158602Rat
1309648Zfp142zinc finger protein 14297614105376164784Rat
1359658Bcs1lBCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone97616492576168940Rat
1311557Rnf25ring finger protein 2597617003776176924Rat
1307318Stk36serine/threonine kinase 3697617692276204423Rat
1594742Ttll4tubulin tyrosine ligase like 497622165976258219Rat
727915Cyp27a1cytochrome P450, family 27, subfamily a, polypeptide 197626465576294551Rat
1308698Prkag3protein kinase AMP-activated non-catalytic subunit gamma 397629571576304959Rat
1560357Ppia-ps15peptidylprolyl isomerase A, pseudogene 1597631300576314011Rat
1304559Wnt6Wnt family member 697632988276343523Rat
1307015Wnt10aWnt family member 10A97634993176362400Rat
1562530Cdk5r2cyclin-dependent kinase 5 regulatory subunit 297641625176417719Rat
628860FevFEV transcription factor, ETS family member97643916476443603Rat
628768Cryba2crystallin, beta A297644725076457968Rat
2325360Mir375microRNA 37597645791176457985Rat
1563002Cfap65cilia and flagella associated protein 6597645921176494199Rat
7506283LOC102549980uncharacterized LOC10254998097649418676502960Rat
620021IhhIndian hedgehog signaling molecule97650431576510532Rat
1359338Nhej1nonhomologous end-joining factor 197652632276622488Rat
2319343Atp5mc2l1ATP synthase membrane subunit c locus 2 like 197654937076549840Rat
1307402Slc23a3solute carrier family 23, member 397662262176633188Rat
735175Cnppd1cyclin Pas1/PHO80 domain containing 197663347576640164Rat
1306844Retreg2reticulophagy regulator family member 297664028276646400Rat
1306260Zfand2bzinc finger AN1-type containing 2B97666546676668447Rat
71077Abcb6ATP binding cassette subfamily B member 697666855476677263Rat
1310450Atg9aautophagy related 9A97667740376688050Rat
1359242Ankzf1ankyrin repeat and zinc finger peptidyl tRNA hydrolase 197668819476695162Rat
1309474Glb1lgalactosidase, beta 1-like97669332576705548Rat
629474Stk16serine/threonine kinase 1697670559176708859Rat
1359623Tuba4atubulin, alpha 4A97670961776714327Rat
7695235LOC102554903uncharacterized LOC10255490397671474776730584Rat
1591035Dnajb2DnaJ heat shock protein family (Hsp40) member B297673106076739278Rat
620777Ptprnprotein tyrosine phosphatase, receptor type, N97674101076756704Rat
40942445LOC120094712uncharacterized LOC12009471297674560976750739Rat
3555Resp18regulated endocrine-specific protein 1897676517976771824Rat
1583848Dnpepaspartyl aminopeptidase97679993176808841Rat
620686Desdesmin97685097976858695Rat
7559628LOC102550477uncharacterized LOC10255047797685832976873352Rat
2124Spegstriated muscle enriched protein kinase97686571476923170Rat
40998509LOC120094713uncharacterized LOC12009471397690245676921926Rat
1560644GmppaGDP-mannose pyrophosphorylase A97692672476934274Rat
11504586LOC108351955uncharacterized LOC10835195597693729576940926Rat
621068Asic4acid sensing ion channel subunit family member 497694153276962900Rat
41266346LOC120094714uncharacterized LOC12009471497694623276947900Rat
1359458Chpfchondroitin polymerizing factor97696317876967878Rat
1306073Obsl1obscurin like cytoskeletal adaptor 197696780276993771Rat
2319152Tmem198transmembrane protein 19897696807976974131Rat
2912Inhainhibin subunit alpha97699446576997366Rat
1305046Stk11ipserine/threonine kinase 11 interacting protein97701229777027989Rat
3712Slc4a3solute carrier family 4 member 397703624377053940Rat
40983058LOC120094715uncharacterized LOC12009471597711987877144297Rat
11451317LOC108351964uncharacterized LOC10835196497834128378353399Rat
11441754LOC108351966uncharacterized LOC10835196697840676678510208Rat
1564536RGD1564536similar to Cofilin, non-muscle isoform (Cofilin-1)97843364778434301Rat
11492101LOC108351965uncharacterized LOC10835196597851091578541993Rat
41245564LOC120094891small nucleolar RNA SNORA4397857850178578638Rat
1560587Epha4Eph receptor A497881546078958139Rat
41120957LOC120094716uncharacterized LOC12009471697889685178933600Rat
7521510LOC102551060uncharacterized LOC10255106097896537978982823Rat
41022835LOC120094905U1 spliceosomal RNA97935164579351807Rat
40973822LOC120094851uncharacterized LOC12009485197937539879380326Rat
9346176LOC103690559uncharacterized LOC10369055997939681379426093Rat
620431Pax3paired box 397956745579664042Rat
11455030LOC108351956RING finger protein 223-like97968147879684988Rat
40952464LOC120094975U6 spliceosomal RNA97975781579757917Rat
1565739Sgpp2sphingosine-1-phosphate phosphatase 297976265879884665Rat
1303210Farsbphenylalanyl-tRNA synthetase subunit beta97988785279947082Rat
1311644Mogat1monoacylglycerol O-acyltransferase 197998096379988513Rat
70552Acsl3acyl-CoA synthetase long-chain family member 398011516480164636Rat
7514331LOC102551819U3 small nucleolar RNA-associated protein 14 homolog B-like98012062280129166Rat
1302957Kcne4potassium voltage-gated channel subfamily E regulatory subunit 498024342980251533Rat
41018431Trnat-agu20transfer RNA threonine (anticodon AGU) 2098033471680334790Rat
619975Hdac1lhistone deacetylase 1-like98045261580454615Rat
41241510LOC120094717uncharacterized LOC12009471798064940180677567Rat
3626Scg2secretogranin II98080307480808646Rat
6499336Eef1a1-ps8eukaryotic translation elongation factor 1 alpha 1, pseudogene 898086618480867575Rat
40949615LOC120094936small nucleolar RNA SNORA1798087056180870674Rat
1566037Rpsa-ps11ribosomal protein SA, pseudogene 1198091006880912886Rat
1311772Ap1s3adaptor related protein complex 1 subunit sigma 398095040281009889Rat
1305996Wdfy1WD repeat and FYVE domain containing 198103485281092823Rat
1309556Mrpl44mitochondrial ribosomal protein L4498110665881111709Rat
11406805LOC10835203040S ribosomal protein S2 pseudogene98111517781116076Rat
3748Serpine2serpin family E member 298112474681188866Rat
1589866Fam124bfamily with sequence similarity 124 member B98151301881533621Rat
1308190Cul3cullin 398159264181670428Rat
1561963Dock10dedicator of cytokinesis 1098184359982101540Rat
1306139Rnf11l2ring finger protein 11-like 298218177982183568Rat
9171458Nyap2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 298240679782658250Rat
41266326LOC120094719uncharacterized LOC12009471998316197583182540Rat
11449647LOC108352031glyceraldehyde-3-phosphate dehydrogenase pseudogene98336527983366295Rat
7570114LOC102553709uncharacterized LOC10255370998344640383484732Rat
2922Irs1insulin receptor substrate 198355296483605797Rat
1306477Rhbdd1rhomboid domain containing 198363003783748690Rat
41300199LOC120094721uncharacterized LOC12009472198382906283863252Rat
1305355Col4a4collagen type IV alpha 4 chain98383317383875436Rat
71085Col4a3collagen type IV alpha 3 chain98387584984004955Rat
1310230Mffmitochondrial fission factor98400779884036039Rat
1588633Tm4sf20transmembrane 4 L six family member 2098403871584052615Rat
41118077LOC120094722uncharacterized LOC12009472298404353984047154Rat
41192800LOC120094723uncharacterized LOC12009472398407402184082651Rat
1560041Agfg1ArfGAP with FG repeats 198412484584182615Rat
11476313LOC10835200460S ribosomal protein L30-like98426224084265380Rat
1311413Slc19a3solute carrier family 19 member 398427572284299368Rat
3646Ccl20C-C motif chemokine ligand 2098438903184391629Rat
1561436Daw1dynein assembly factor with WD repeats 198443555284472632Rat
1311951SphkapSPHK1 interactor, AKAP domain containing98450938384657582Rat
41106528LOC120094724uncharacterized LOC12009472498501268385038789Rat
1334135Or5ak27-ps1olfactory receptor family 5 subfamily AK member 27, pseudogene 198505117685051964Rat
41331248LOC120094919small nucleolar RNA SNORA1798517594485176070Rat
1560766Pid1phosphotyrosine interaction domain containing 198528433585503035Rat
1359385Dnerdelta/notch-like EGF repeat containing98558698585902461Rat
41173954LOC120094725uncharacterized LOC12009472598568638485693986Rat
1306607Trip12thyroid hormone receptor interactor 1298591669186043312Rat
1307870Fbxo36F-box protein 3698604252286107220Rat
1309675Slc16a14solute carrier family 16, member 1498611006686137546Rat
7595527LOC102550706uncharacterized LOC10255070698611970286126905Rat
40957244LOC120094727uncharacterized LOC12009472798613731486139788Rat
1310830Csprscomponent of Sp100-rs98616578386174596Rat
1310173Sp110SP110 nuclear body protein98620050386225355Rat
1306355Sp140SP140 nuclear body protein98622447286274724Rat
1359550Sp100SP100 nuclear antigen98631099086377036Rat
1563917A630001G21RiklRIKEN cDNA A630001G21 gene like98638177786405385Rat
9334462LOC103690562uncharacterized LOC10369056298640947386421040Rat
1565945Rps10-ps8ribosomal protein S10, pseudogene 898642216286422790Rat
1306390Cab39calcium binding protein 3998646309586524545Rat
1309503Itm2cintegral membrane protein 2C98654592786559745Rat
41289198LOC120094894U1 spliceosomal RNA98656550586565670Rat
1559828Gpr55G protein-coupled receptor 5598658490686640601Rat
1561755Srp14l1signal recognition particle 14 like 198664582986649077Rat
41119897LOC120094730uncharacterized LOC12009473098664897086663626Rat
1308164Spata3spermatogenesis associated 398666035286672272Rat
41266300LOC120094731uncharacterized LOC12009473198668501986707213Rat
2318569C9h2orf72similar to human chromosome 2 open reading frame 7298669176786699920Rat
621669Psmd1proteasome 26S subunit, non-ATPase 198670971486785213Rat
61801Htr2b5-hydroxytryptamine receptor 2B98673579386756638Rat
1305615Armc9armadillo repeat containing 998680279186928611Rat
7690483LOC102548542uncharacterized LOC10254854298689060086956019Rat
41055286Trnap-agg49transfer RNA proline (anticodon AGG) 4998693189386931965Rat
1310580B3gnt7UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 798695622086960171Rat
3153Nclnucleolin98699958887008112Rat
41013737Snora75small nucleolar RNA, H/ACA box 7598700024887000384Rat
41153847Snord20small nucleolar RNA, C/D box 2098700106887001147Rat
40940351Snord82small nucleolar RNA, C/D box 8298700451587004586Rat
619867Nmur1neuromedin U receptor 198703323187038070Rat
1564629Tex44testis expressed 4498707568487077102Rat
7714518LOC102548729uncharacterized LOC10254872998709320987102973Rat
41138001LOC120094734uncharacterized LOC12009473498709647687113703Rat
41309199LOC120094735uncharacterized LOC12009473598713565287154677Rat
61829Ptmaprothymosin alpha98717625187180333Rat
41178953LOC120094949small nucleolar RNA U1398719052987190633Rat
1306204Pde6dphosphodiesterase 6D98719298987237979Rat
40940829Trnav-aac37transfer RNA valine (anticodon AAC) 3798721626887216349Rat
1306918Cops7bCOP9 signalosome subunit 7B98723813287263967Rat
620850Nppcnatriuretic peptide C98732005187324251Rat
1560168Dis3l2DIS3-like 3'-5' exoribonuclease 298735540987736616Rat
2322949Nsa2-ps1NSA2 ribosome biogenesis factor, pseudogene 198759060687591465Rat
1583637Rpl21-ps1ribosomal protein L21, pseudogene 198763513387635684Rat
1565100Alpgalkaline phosphatase, germ cell98774872187761500Rat
2325055Alppalkaline phosphatase, placental98776584687768606Rat
2099Alpialkaline phosphatase, intestinal98777341187776877Rat
41363602LOC120094871U6 spliceosomal RNA98779243687792530Rat
621650Akp3alkaline phosphatase 3, intestine, not Mn requiring98780468087808715Rat
61806Ecel1endothelin converting enzyme-like 198781951687829154Rat
1563955Prss56serine protease 5698784280687859978Rat
2352Chrndcholinergic receptor nicotinic delta subunit98786241787870833Rat
2354Chrngcholinergic receptor nicotinic gamma subunit98787808587884193Rat
1307790Eif4e2eukaryotic translation initiation factor 4E family member 298788612687914470Rat
41329502LOC120094860U6 spliceosomal RNA98792549287925595Rat
1559565Efhd1EF-hand domain family, member D198793825987984917Rat
2318130Gigyf2GRB10 interacting GYF protein 298800121288127040Rat
41096162Trnav-aac33transfer RNA valine (anticodon AAC) 3398801670588016779Rat
621661Kcnj13potassium inwardly-rectifying channel, subfamily J, member 1398806300388071112Rat
1311447Snorcsecondary ossification center associated regulator of chondrocyte maturation98814051088145527Rat
1309055Ngefneuronal guanine nucleotide exchange factor98814695688244454Rat
3164Neu2neuraminidase 298821849488267356Rat
41139248LOC120094737uncharacterized LOC12009473798828213688287642Rat
2914Inpp5dinositol polyphosphate-5-phosphatase D98828768088392748Rat
1310631Atg16l1autophagy related 16-like 198842073788457530Rat
41229829Scarna6lsmall Cajal body-specific RNA 6 like98844206588442334Rat
41104869Scarna6small Cajal body-specific RNA 698845058488450846Rat
3619SagS-antigen visual arrestin98846779788508821Rat
1563309Dgkddiacylglycerol kinase, delta98851668688607349Rat
1309613Usp40ubiquitin specific peptidase 4098860792088678940Rat
1549771Ugt1a9UDP glucuronosyltransferase family 1 member A998869698188808465Rat
727833Ugt1a9-psUDP glycosyltransferase 1 family, polypeptide A9, pseudogene98871318488714042Rat
708474Ugt1a8UDP glucuronosyltransferase family 1 member A898872709488808465Rat
620950Ugt1a7cUDP glucuronosyltransferase 1 family, polypeptide A7C98873957788808465Rat
620949Ugt1a6UDP glucuronosyltransferase family 1 member A698874721388808465Rat
11517988LOC108351970uncharacterized LOC10835197098874889788759048Rat
1583689Ugt1a5UDP glucuronosyltransferase family 1 member A598876225088808465Rat
1594329Ugt1a4-psUDP glycosyltransferase 1 family, polypeptide A4, pseudogene98877258788773555Rat
1549728Ugt1a3UDP glycosyltransferase 1 family, polypeptide A398878032888808465Rat
1549741Ugt1a2UDP glucuronosyltransferase 1 family, polypeptide A298879121688808465Rat
1594215Dnajb3DnaJ heat shock protein family (Hsp40) member B398879554288796555Rat
3935Ugt1a1UDP glucuronosyltransferase family 1 member A198880134488808465Rat
1565687Mroh2amaestro heat-like repeat family member 2A98881451588862346Rat
1305846HjurpHolliday junction recognition protein98885337988867730Rat
1592977Ppid-ps21peptidylprolyl isomerase D, pseudogene 2198889168288893091Rat
620762Trpm8transient receptor potential cation channel, subfamily M, member 898889703988990167Rat
11512085LOC108351971uncharacterized LOC10835197198890685488909792Rat
40944180LOC120094914small nucleolar RNA SNORA1798899178588991916Rat
708488Spp2secreted phosphoprotein 298900685889026676Rat
7553846LOC102554187uncharacterized LOC10255418798906466489104187Rat
40983173LOC120094852uncharacterized LOC12009485298924012989242768Rat
1589685Arl4cADP ribosylation factor like GTPase 4C98930033589303770Rat
41275851LOC120094738uncharacterized LOC12009473898931119889324968Rat
41155597LOC120094739uncharacterized LOC12009473998932522289345530Rat
9102062LOC103690569uncharacterized LOC10369056998946099289469978Rat
11424261Gapdh-ps25Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2598952514989526174Rat
41225257LOC120094740uncharacterized LOC12009474098956540589590849Rat
620219Sh3bp4SH3-domain binding protein 498966015689739163Rat
7548599LOC102554430uncharacterized LOC10255443098977724089781278Rat
41056788LOC120094980U6 spliceosomal RNA98978862789788730Rat
7737812LOC102554475uncharacterized LOC10255447598990182189920445Rat
1309244Agap1ArfGAP with GTPase domain, ankyrin repeat and PH domain 199003972090475196Rat
41232573LOC120094807uncharacterized LOC12009480799023271790241118Rat
621866Gbx2gastrulation brain homeobox 299050963390512212Rat
1310850Asb18ankyrin repeat and SOCS box-containing 1899053135090595953Rat
7663504LOC102554789uncharacterized LOC10255478999059597190640971Rat
1305311Iqca1IQ motif containing with AAA domain 199062673590742563Rat
620601Ackr3atypical chemokine receptor 399079968290811246Rat
7705608LOC102555030uncharacterized LOC10255503099084553190856417Rat
40967038LOC120094742uncharacterized LOC12009474299096632090990369Rat
7593803LOC102555145uncharacterized LOC10255514599097464190981811Rat
41035686LOC120094743uncharacterized LOC12009474399102931191033418Rat
1311404Cops8COP9 signalosome subunit 899120742791217258Rat
1308704Col6a3collagen type VI alpha 3 chain99136157891439434Rat
1310733Mlphmelanophilin99150741091542984Rat
628634Prlhprolactin releasing hormone99154312891549022Rat
1562478Rab17RAB17, member RAS oncogene family99155292491566759Rat
1359548Lrrfip1LRR binding FLII interacting protein 199159203291720250Rat
1566074Rbm44RNA binding motif protein 4499173115391756783Rat
61870Ramp1receptor activity modifying protein 199176548191816152Rat
1598338Pkm-ps10pyruvate kinase M1/2, pseudogene 1099182347291834122Rat
1307608Ube2fubiquitin-conjugating enzyme E2F (putative)99184597591881145Rat
1359514Sclyselenocysteine lyase99189026991910947Rat
1562432Espnlespin-like99191203891936803Rat
1309644Klhl30kelch-like family member 3099194247591952756Rat
1584688Erfeerythroferrone99195697191964846Rat
620128IlkapILK associated serine/threonine phosphatase99196644091988791Rat
6488392LOC100912214uncharacterized LOC10091221499199437591996238Rat
1312047Hes6hes family bHLH transcription factor 699200184992003562Rat
61945Per2period circadian regulator 299200728992049551Rat
1309252Traf3ip1TRAF3 interacting protein 199207362292110427Rat
41132162LOC120094985U6 spliceosomal RNA99208750692087608Rat
1310760Asb1ankyrin repeat and SOCS box-containing 199212033292140790Rat
7513527LOC102548291uncharacterized LOC10254829199216421992167303Rat
621286Twist2twist family bHLH transcription factor 299237474092419222Rat
7663763Rps27a-ps9ribosomal protein S27a, pseudogene 999242577992426321Rat
619979Hdac4histone deacetylase 499250346792750164Rat
40972669LOC120094890small nucleolar RNA SNORA4499260122092601359Rat
11410190LOC108351974uncharacterized LOC10835197499281772392865423Rat
727968Ndufa10NADH:ubiquinone oxidoreductase subunit A1099300703493041825Rat
41012887Spcs3-ps1signal peptidase complex subunit 3, pseudogene 199303549493038160Rat
1332746Or6b2olfactory receptor family 6 subfamily B member 299304847593049413Rat
1334214Or6b2bolfactory receptor family 6 subfamily B member 2B99305674093057675Rat
1334141Or6b3olfactory receptor family 6 subfamily B member 399307003193070969Rat
1333294Or9s23bolfactory receptor family 9 subfamily S member 23B99311732893118299Rat
1333345Or9s23olfactory receptor family 9 subfamily S member 2399313148393132454Rat
1333005Olr1348-psolfactory receptor pseudogene 134899313324693133449Rat
1333615Or9s27olfactory receptor family 9 subfamily S member 2799313663293146531Rat
1333489Or9s15olfactory receptor family 9 subfamily S member 1599314957393150544Rat
1333485Or9s14bolfactory receptor family 9 subfamily S member 14B99316024893161207Rat
1333070Or9s14olfactory receptor family 9 subfamily S member 1499317336093174328Rat
1333848Or9s13olfactory receptor family 9 subfamily S member 1399318459493194689Rat
1596701Cops9COP9 signalosome subunit 999320984393214774Rat
708465Otosotospiralin99321694893220614Rat
61853Gpc1glypican 199339623493424047Rat
9685085Mir149microRNA 14999341438993414477Rat
1595229Ankmy1ankyrin repeat and MYND domain containing 199342366493476651Rat
41317148LOC120094747uncharacterized LOC12009474799342929193434280Rat
1595220Dusp28dual specificity phosphatase 2899347283293474207Rat
1595210Rnpepl1arginyl aminopeptidase like 199347660093486331Rat
69354Capn10calpain 1099349813293510494Rat
40954341LOC120094865U6 spliceosomal RNA99351284493512931Rat
1309404Gpr35G protein-coupled receptor 3599352716593539573Rat
1562727Aqp12aaquaporin 12A99355452793560011Rat
1304996Kif1akinesin family member 1A99356303393647412Rat
2073Agxtalanine--glyoxylate aminotransferase99367538493685337Rat
1563692Mab21l4mab-21 like 499369045593701267Rat
41176099LOC120094749uncharacterized LOC12009474999369094793696037Rat
7728853Crocc2ciliary rootlet coiled-coil, rootletin family member 299370878693769617Rat
1566079Sned1sushi, nidogen and EGF-like domains 199377408793834003Rat
1562440Mterf4mitochondrial transcription termination factor 499383416293838838Rat
9112007LOC103690574ubiquitin-associated domain-containing protein 1 pseudogene99384071293842719Rat
1306146PaskPAS domain containing serine/threonine kinase99384427593886036Rat
7656325LOC102549694protein NYNRIN-like99387646993885044Rat
1308169Ppp1r7protein phosphatase 1, regulatory subunit 799388606893911198Rat
41293215LOC120094986U6 spliceosomal RNA99390673393906836Rat
1302987Ano7anoctamin 799391752493945323Rat
620962Hdlbphigh density lipoprotein binding protein99394809994018040Rat
40965981LOC120094809uncharacterized LOC12009480999398578693989762Rat
620056Septin2septin 299401814194051386Rat
1308003Farp2FERM, ARH/RhoGEF and pleckstrin domain protein 299405365094161982Rat
41266143LOC1200949515S ribosomal RNA99415679494156912Rat
727809Stk25serine/threonine kinase 2599416183494174095Rat
70984BokBCL2 family apoptosis regulator BOK99422349394234476Rat
1359473Thap4THAP domain containing 499424258194282312Rat
1309664Atg4bautophagy related 4B, cysteine peptidase99428241794314109Rat
1309614Dtymkdeoxythymidylate kinase99431555294324386Rat
1307908Ing5inhibitor of growth family, member 599432654994343392Rat
1307976D2hgdhD-2-hydroxyglutarate dehydrogenase99435055594368384Rat
1593854Gal3st2galactose-3-O-sulfotransferase 299438245694387990Rat
1308624Neu4neuraminidase 499439692094402576Rat
1311658Pdcd1programmed cell death 199441878694431945Rat
1309819Chchd2l3coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 399450043994501110Rat
6490130Set-ps2Set nuclear proto-oncogene, pseudogene 299452574394574248Rat
1593789Noc3l-ps2NOC3-like DNA replication regulator, pseudogene 299461937094650913Rat
1592645Zfp207-ps1zinc finger protein 207, pseudogene 199471618294759721Rat
1592616Ahcy-ps2adenosylhomocysteinase, pseudogene 299489069494892294Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10359D9Got10923298788122287881453Ratregion
10403D9Wox811896647532866475449Ratregion
10404D9Mit219896643705266437242Ratregion
10411D9Mgh414196745134667451485Ratregion
10658D9Wox1518494941569249415876Ratregion
10807D9Wox1012397699412376994246Ratregion
10965D9Arb525798700863587008898Ratregion
33979D9Mit420494243579742436001Ratregion
33999D9Mit514297781389477814038Ratregion
34013D9Mit314495816286358163035Ratregion
34088D9Mgh211098636963186369743Ratregion
34413D9Mgh315094077390540774051Ratregion
11296D9Arb312497594962675949750Ratregion
11312D9Bro116697702634377026453Ratregion
33688D9Mit717598920003589200212Ratregion
36009D9Rat5414998131436481314513Ratregion
36059D15Rat3016297450771274507902Ratregion
36147D9Rat1514596538378965383934Ratregion
36155D9Rat913697739687677397012Ratregion
36340D9Mit1124897282990872830156Ratregion
36388D10Mgh2617994758474747584926Ratregion
37216D9Rat6720998838794388388152Ratregion
37218D9Rat6911696937159569371715Ratregion
37220D9Rat7320194004371240043913Ratregion
37312D9Rat10010199465802494658115Ratregion
37522D9Rat8524696642120366421453Ratregion
37530D9Rat10421694535995545360171Ratregion
35172D9Rat1912596228760862287724Ratregion
35555D9Rat813397690295476903085Ratregion
36803D9Rat5015099355248293552632Ratregion
36838D9Rat5116698451486184515030Ratregion
36908D9Rat414899205881192058970Ratregion
37002D9Rat5312898119923881199366Ratregion
37052D9Rat615798850705588507212Ratregion
37094D9Rat15620196411687264117084Ratregion
37190D9Rat9921998921570589215924Ratregion
37604D9Rat7622893696235936962591Ratregion
37626D9Rat10720197791580877916013Ratregion
37724D9Rat8420998519398285194188Ratregion
37810D9Rat8922597470166874701891Ratregion
37932D9Rat6820798907535889075565Ratregion
36406D9Mgh914196082718760827328Ratregion
36556D9Rat1018297109815771098346Ratregion
36582D9Rat2117294920974149209920Ratregion
34771D9Rat1817596246215362462332Ratregion
34815D9Rat1617596138143461381613Ratregion
34862D9Rat2315495641096256411096Ratregion
35010D9Rat2416894920978849209967Ratregion
35575D9Rat2213595503543555035576Ratregion
35691D9Rat510898707346887073594Ratregion
35809D9Rat1214696785297367853119Ratregion
35819D9Rat2614794059394440594091Ratregion
35833D9Rat2014195006217650062324Ratregion
35843D9Rat1312796569118865691299Ratregion
39608D9Rat12413294286492442865057Ratregion
39654D9Rat11123098910172889101958Ratregion
39658D9Rat14220198988242189882624Ratregion
39706D9Rat12220095701844457018665Ratregion
39788D9Rat14716093836806738368227Ratregion
39812D9Rat12520394293041942930620Ratregion
39872D9Rat11920895107333651073542Ratregion
39970D9Rat14110099154551291545612Ratregion
38036D9Rat6420199249158992491790Ratregion
38048D9Rat9019697571284375713051Ratregion
38056D9Rat9820095967979959680004Ratregion
38066D9Rat6520496450779964507997Ratregion
38270D9Rat9720199109075891090963Ratregion
38294D9Rat7219997380163473801824Ratregion
38368D9Rat9521997290011272900329Ratregion
38388D9Rat7424198369287683693117Ratregion
40706D9Rat11822396036983760370066Ratregion
40750D9Rat11422797212856572128798Ratregion
38626D2Rat17113796770325867703293Ratregion
38716D9Rat6014794803593448036057Ratregion
40080D9Rat14412798385153183851658Ratregion
40088D9Rat14812693897030038970426Ratregion
40304D9Rat12114095099769550997861Ratregion
38902D9Rat8324599294927192949515Ratregion
38914D9Rat9111993847304738473166Ratregion
39178D9Rat9321795921443459214645Ratregion
39246D9Rat6323794279151342791750Ratregion
39362D9Rat9220494996854649968732Ratregion
39384D9Rat14523498329093383291164Ratregion
39502D9Rat14620597096039070960606Ratregion
42251D9Arb740094292073042921101Ratregion
42885D9Rat15715593742213437422299Ratregion
42887D9Rat17621296660447766604697Ratregion
42888D9Rat17312296757594967576067Ratregion
42889D9Rat17421296984477269844966Ratregion
42890D9Rat17514397116337871163509Ratregion
42891D9Rat17220697107579871076004Ratregion
42892D9Rat15522097262537872625593Ratregion
42893D9Rat17121297474478874744995Ratregion
42894D9Rat17020197762749377627685Ratregion
42896D9Rat16822998698659586986825Ratregion
41316D9Rat11314897328052873280672Ratregion
41514D9Rat11715596346956963469726Ratregion
42359D9Rat19020193923576639235966Ratregion
42360D9Rat18914793958443439584583Ratregion
42361D9Rat18822693953834739538572Ratregion
42362D9Rat18623498259800082598227Ratregion
42363D9Rat18723198526960585269815Ratregion
40886D9Rat11214697869194278692080Ratregion
40888D9Rat12720394077391640774115Ratregion
40896D9Rat11520096940155969401759Ratregion
40916D9Rat12322495815701458157242Ratregion
41088D9Rat12020895314156553141785Ratregion
41554D9Rat11616796432949264329651Ratregion
41600D9Rat11017499541071195410867Ratregion
44552D9Wox2113696750902367509080Ratregion
44588D9Got4729693830441538304711Ratregion
44590D9Got4416193857550538575638Ratregion
44591D9Got4919694008016640080362Ratregion
44592D9Got4822294011524940115471Ratregion
44593D9Got5028393951597639516259Ratregion
44594D9Got5114694177059141770737Ratregion
44596D9Got5329894405463344054931Ratregion
44599D9Got5211894350314643503264Ratregion
44600D9Got5513594317266343172798Ratregion
44601D9Wox39894565985345659954Ratregion
44602D9Got5818395260444052604625Ratregion
44603D9Wox1424295305993353060173Ratregion
44604D9Got6021295660337256603584Ratregion
44605D9Got5922395654765856547881Ratregion
44606D9Got6213795710749157107628Ratregion
44607D9Got6118795808840058088587Ratregion
44609D9Got6322995996728459967513Ratregion
44610D9Got6420696422914764229355Ratregion
44611D9Got6722396324139963241622Ratregion
44612D9Got6619996313226163132460Ratregion
44614D9Got6916096449669764496857Ratregion
44615D9Got6520296426994164270143Ratregion
44616D9Got6811896542110465421222Ratregion
44617D9Wox428096594175965942010Ratregion
44618D9Got7023296584151565841747Ratregion
44619D9Got7116496623641966236583Ratregion
44620D9Got7319096734105967341249Ratregion
44621D9Got7219896815839068158588Ratregion
44622D9Got7416397017264470172807Ratregion
44623D9Got7821897110716271107380Ratregion
44624D9Got7517697075469770754873Ratregion
44625D9Got7617897072303770723215Ratregion
44626D9Got7714397045995370460096Ratregion
44627D9Got8413297290397472904106Ratregion
44628D9Got8029897273653672736830Ratregion
44629D9Got8118997335805173358240Ratregion
44630D9Got7928597243887272439157Ratregion
44631D9Got8317597337013273370308Ratregion
44634D9Got8815997455503774555196Ratregion
44635D9Got8917497521067475210848Ratregion
44636D9Got8622997563514275635371Ratregion
44637D9Got8729797542855575428852Ratregion
44638D9Got9425197941223679412487Ratregion
44639D9Got9611697708160177081719Ratregion
44640D9Got9813697630759776307733Ratregion
44641D9Got9721497810013078100344Ratregion
44642D9Got9012597856243778562558Ratregion
44644D9Got9112597984257979842704Ratregion
44646D9Got9314598104993281050077Ratregion
44647D9Got10826398697266986972940Ratregion
44648D9Got10720798617469286174899Ratregion
44649D9Wox216298778709587787267Ratregion
44650D9Got10617298608030486080475Ratregion
44653D9Got11413898972242989722567Ratregion
44654D9Got11116799071994690720113Ratregion
44656D9Got11212299142450391424625Ratregion
44657D9Got11617099279342392793590Ratregion
44658D9Got11916499352575193525915Ratregion
44659D9Got11522899340536993405597Ratregion
44661D9Got12129699413659594136891Ratregion
44662D9Got11818799511644195116628Ratregion
44663D9Got12221999439383294394051Ratregion
60644D9Got10028498256128282561565Ratregion
60645D9Got10127299235666392356935Ratregion
60646D9Got10212297890545778905579Ratregion
60648D9Got10419597951306679513258Ratregion
60654D9Got13511095889750258897612Ratregion
60654D9Got13511095889750258897772Ratregion
60655D9Got13617397526731875267491Ratregion
60664D9Got5419394501696345017156Ratregion
60666D9Got5727795411829754118571Ratregion
60671D9Got9513397665161876651753Ratregion
60672D9Got9917497595697175957145Ratregion
45516D17Got10816296290804662908187Ratregion
625807D9Got11025698925897489259230Ratregion
61287D9Uia625797927151179271759Ratregion
61288D9Uia917994249516442495343Ratregion
62512D9Uia218396487016764870352Ratregion
62513D9Uia313896441130964411447Ratregion
62516D9Uia428196207227562072556Ratregion
66388D9Mco1026295367008853670350Ratregion
66417D9Mco126993754075537541153Ratregion
66421D9Mco220095644711656447294Ratregion
66426D9Mco418197885844678858631Ratregion
66432D9Mco728597885844878858739Ratregion
66433D9Mco820096435632364356550Ratregion
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5128492D9Mco10122097614576676145986Ratregion
5128494D9Mco10223097617534676175576Ratregion
5503057Wnt10a52297636166376362185Ratregion
5503111CUL3-110698160890581609462Ratregion
5503144PSMD110098672993686730503Ratregion
5503148SF3B1-1095650592456506615Ratregion
5503160ZNF207-114499475869794758840Ratregion
5503352UniSTS:24053335499080970090810054Ratregion
5503504UniSTS:463202164896744856867450216Ratregion
5503510DNAH7__476041395496025354960666Ratregion
5503512TRIP12_393049598591973285920227Ratregion
5507495ECD0644870797694241076943117Ratregion
5507541STS-Z41083095579543755796518Ratregion
5507567D17S178995098797254587973112Ratregion
5503138OMM105655598392747083928025Ratregion
5503158UGCGL110893839251838393165Ratregion
5503230UniSTS:237290095333869153338954Ratregion
5503230UniSTS:237290096148087461481369Ratregion
5503340UniSTS:238129098788325287884005Ratregion
5503398U2388617193783235837832529Ratregion
5503906Crygc096645180866453385Ratregion
5504149UniSTS:25920425396645173566453312Ratregion
5504157Cryge154696744864167450187Ratregion
5507638D9Mgc45e36097526222775262590Ratregion
5507688Igfbp519997445265374453508Ratregion
5507757REN5287822397687824176878464Ratregion
5507759REN5303123597691284376913078Ratregion
5507761REN5313419297693466076934852Ratregion
5507763REN5314125197693616676936417Ratregion
5507765REN5316727097694186376942133Ratregion
5507767REN5316625197694165976941910Ratregion
5507769REN5316526997694141076941679Ratregion
5507771REN5341327397699275776993030Ratregion
5507773REN5417124997716174177161990Ratregion
5507775REN5431223297720270477202936Ratregion
5503597UniSTS:46471314298360159283601734Ratregion
5503599UniSTS:46471237298360222683602598Ratregion
5503807UniSTS:47132837297634030076340672Ratregion
5504494PMC23772P164397894966178950304Ratregion
5504218RH8000418798016441480164601Ratregion
5504332D17S1516E16899475900494759158Ratregion
5504346D11S3330095122376851224061Ratregion
5504588PMC310709P244697576867975769125Ratregion
5505005Fzd718696093279760932983Ratregion
5504622PMC316619P258696093270960933295Ratregion
5505167Il18rap47194279787142798342Ratregion
5505318Nppc80598732344187324246Ratregion
5505138Cryba277997644936776450146Ratregion
5505331Tnp136697459468974595055Ratregion
5505580UniSTS:484839110797641625076417357Ratregion
5505740UniSTS:492179138098707567087077050Ratregion
5506100UniSTS:49835814595530820455308349Ratregion
5506111UniSTS:49839616396423779864237961Ratregion
5506129UniSTS:4984317499342290593422979Ratregion
5506330MARC_49122-49123:1117732036:119897883086978831513Ratregion
5506165UniSTS:498517118798858995388591140Ratregion
5506138Satb28195834834558348426Ratregion
5506567PTPRN_135056897674102276741590Ratregion
5506717ACADL12696836261168362737Ratregion
5506881G4720226693997422639974492Ratregion
5507021fk33e12.x122098652129886522120Ratregion
5499561AI8525619695013848050138576Ratregion
5501782MARC_12193-12194:1004713732:141594906312949063544Ratregion
5500244AI85424312297586954175870766Ratregion
5500274D19S841142499222013192221555Ratregion
5500312GDB:18123832494740919847410233Ratregion
5500410GDB:5429059597601811976018214Ratregion
5499699UniSTS:2341159694232503642325132Ratregion
5499701UniSTS:23414410496610655166106655Ratregion
5499703UniSTS:23416719298652432286524514Ratregion
5499705UniSTS:23417413199250753492507665Ratregion
5499707UniSTS:23417120999046948290469691Ratregion
5500795stSG625835126197629834276299603Ratregion
5500817stSG63297982197685693076857751Ratregion
5500819stSG633055122897694188976943117Ratregion
5500807stSG62996750298625370686254208Ratregion
5501033PMC124275P150499200864992009153Ratregion
5501129PMC141152P136697459468974595055Ratregion
5501329ECD1721140997699303776993446Ratregion
5504151UniSTS:25920328796646157066463204Ratregion
5504692PMC55400P26996653662266537280Ratregion
5501960MARC_21133-21134:1025201105:194196375744463758385Ratregion
5502190MARC_8095-8096:996688286:168797674565076746337Ratregion
5505524G1938913394526337645263509Ratregion
5506096UniSTS:49834370999342246293423171Ratregion
5501800MARC_12911-12912:999888716:317097644740976447937Ratregion
5501990MARC_21861-21862:1027094738:1105997617760376178662Ratregion
5502008MARC_23613-23614:1027526035:1097702629977027156Ratregion
5502335RH12454922394985184049852063Ratregion
5502762TBC1D818094165315041653482Ratregion
5507256G6737222497685325976853650Ratregion
5502790GDF819094845411048454300Ratregion
5502879Fzd5096611907666120205Ratregion
5502885Gls86494941458549415449Ratregion
5502247AA79289324796043254560432792Ratregion
5502473RH1249838293839391038393992Ratregion
6903883D9Mco10323795047329250473531Ratregion
6903886D9Mco10420095217623152176433Ratregion
6903888D9Mco10521395228303952283252Ratregion
6903890D9Mco10621595318488153185096Ratregion
6903892D9Mco10723096152910161529521Ratregion
6903892D9Mco10723096152929161529521Ratregion
6903894D9Mco10816496680517166805335Ratregion
6903896D9Mco10919196701993467020125Ratregion
11354904D9Mco11025098869803788698287Ratregion
11354906D9Mco12121899097588790976105Ratregion
11354931D9Mco11520098954172889541928Ratregion
11353958D9Mco12422099111397791114199Ratregion
11353953D9Mco11686798964905489649921Ratregion
Position Markers

Flank 1: (D9Rat76)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2936,962,359 - 36,962,591 (+)MAPPER
Rnor_6.0941,261,034 - 41,261,265NCBI
Rnor_5.0940,929,725 - 40,929,956UniSTS
RGSC_v3.4933,496,795 - 33,497,026UniSTS
RGSC_v3.4933,496,794 - 33,497,026RGD
RGSC_v3.1933,498,209 - 33,498,440RGD
Celera934,746,702 - 34,746,933UniSTS
RH 3.4 Map9352.2RGD
RH 3.4 Map9352.2UniSTS
RH 2.0 Map9356.8RGD
SHRSP x BN Map932.0698RGD
FHH x ACI Map924.71RGD
Cytogenetic Map9q21UniSTS
Peak: (D9Mit5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2977,813,894 - 77,814,038 (+)MAPPER
Rnor_6.0990,024,661 - 90,024,806NCBI
Rnor_5.0989,765,913 - 89,766,058UniSTS
RGSC_v3.4975,633,467 - 75,633,613RGD
RGSC_v3.4975,633,468 - 75,633,613UniSTS
RGSC_v3.1975,798,653 - 75,798,798RGD
Celera975,378,443 - 75,378,588UniSTS
RH 3.4 Map9757.3RGD
RH 3.4 Map9757.3UniSTS
RH 2.0 Map9794.6RGD
SHRSP x BN Map952.3698RGD
Cytogenetic Map9q33UniSTS
Flank 2: (D9Rat110)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2995,410,711 - 95,410,867 (+)MAPPER
Rnor_6.09102,531,710 - 102,531,865NCBI
Rnor_5.09102,147,849 - 102,148,004UniSTS
RGSC_v3.4994,217,517 - 94,217,673RGD
RGSC_v3.4994,217,518 - 94,217,673UniSTS
RGSC_v3.1994,426,997 - 94,427,153RGD
Celera992,908,963 - 92,909,118UniSTS
SHRSP x BN Map964.7399RGD
SHRSP x BN Map964.7399UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)92375402458157242Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)94996854671098346Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)98636963192058970Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
724543Cm20Cardiac mass QTL 203.9heart mass (VT:0007028)calculated heart weight (CMO:0000073)91696139840594091Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1578659Tspe1Trichinella spiralis expulsion QTL 14.8parasite quantity (VT:0010441)logarithm of the intestinal adult Trichinella spiralis count (CMO:0002024)96138143465691299Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)92746863972468639Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97665062976771824Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95584784177026453Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)992491589100929786Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
6903937Bp356Blood pressure QTL 3560.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94790220852283252Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97927151191616855Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)95662771378595166Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
1598823Memor16Memory QTL 161.9exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)92213332249968732Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general S allele is responsible for the increase in total cholesterol level 2290428
qtl_general this region affects cholesterol metabolism as they house cholesteryl ester transfer protein interacting loci 2290428
qtl_general software used: Map Manager QTXb19 2290428
qtl_general environmental conditions: animals were fasted for 16 hours before the determination of lipid levels 2290428
qtl_general number of animals: 159 male hybrids derived by intercrossing the transgenic animals with SR/JrHsd 2290428
qtl_map spans 66.6 Mbp 2290428