ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regulation of synapse organization |
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Accession: | GO:0050807
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browse the term
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Definition: | Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). |
Synonyms: | exact_synonym: | regulation of synapse organisation; regulation of synapse structure |
| related_synonym: | regulation of synapse organization and biogenesis |
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Agrn
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agrin
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involved_in
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IDA IMP
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PMID:19524020
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SynGO |
PMID:19524020 PMID:19524020 |
RGD:13702171, RGD:13702171 |
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
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G
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Apoe
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apolipoprotein E
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involved_in
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ISO
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(PMID:27683909)
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RGD |
PMID:27683909 |
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NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932
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G
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Arf4
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ARF GTPase 4
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involved_in
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ISO IEA
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(PMID:23050017) GO_REF:0000107
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RGD Ensembl |
PMID:23050017 |
GO_REF:0000107 |
NCBI chr16:1,903,238...1,920,012
Ensembl chr16:1,896,546...1,913,261
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G
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C1ql3
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complement C1q like 3
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acts_upstream_of_or_within
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ISO
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(PMID:21262840)
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RGD |
PMID:21262840 |
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NCBI chr17:76,119,344...76,129,170
Ensembl chr17:76,119,447...76,128,530
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G
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Camk1
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calcium/calmodulin-dependent protein kinase I
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involved_in
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IDA IBA IEP IMP
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PMID:18184567 GO_REF:0000033
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GO_Central |
PMID:18184567 PMID:18184567 PMID:18184567 |
GO_REF:0000033, RGD:13702161, RGD:13702161, RGD:13702161 |
NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
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G
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Cdh8
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cadherin 8
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involved_in
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IEA ISO
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GO_REF:0000107 (PMID:25126785)
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Ensembl RGD |
PMID:25126785 |
GO_REF:0000107 |
NCBI chr19:5,494,552...5,901,950
Ensembl chr19:5,494,174...5,895,669
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G
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Cntnap4
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contactin associated protein family member 4
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involved_in
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ISO
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(PMID:24870235)
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RGD |
PMID:24870235 |
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NCBI chr19:40,568,684...40,861,879
Ensembl chr19:40,568,684...40,854,656
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G
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Cttnbp2
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cortactin binding protein 2
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involved_in
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IDA IBA IMP
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PMID:22262902 GO_REF:0000033
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GO_Central |
PMID:22262902 PMID:22262902 |
GO_REF:0000033, RGD:13702362, RGD:13702362 |
NCBI chr 4:46,800,975...46,964,681
Ensembl chr 4:46,800,981...46,964,631
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G
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Dag1
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dystroglycan 1
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involved_in
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ISO IEA
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(PMID:27707967) GO_REF:0000107
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RGD Ensembl |
PMID:27707967 |
GO_REF:0000107 |
NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:108,890,929...108,952,325
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G
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Dkk1
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dickkopf WNT signaling pathway inhibitor 1
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involved_in
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ISO IEA
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(PMID:25318560) GO_REF:0000107
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RGD Ensembl |
PMID:25318560 |
GO_REF:0000107 |
NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202
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G
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Etv5
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ETS variant transcription factor 5
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acts_upstream_of_or_within
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ISO IEA
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MGI:3589421 (PMID:17785180) GO_REF:0000107
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RGD Ensembl |
PMID:17785180 |
GO_REF:0000107 |
NCBI chr11:92,113,171...92,170,758
Ensembl chr11:78,608,710...78,666,215
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G
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Gpm6a
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glycoprotein m6a
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involved_in
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IDA IMP
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PMID:27793698
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SynGO |
PMID:27793698 PMID:27793698 |
RGD:13702167, RGD:13702167 |
NCBI chr16:36,641,282...36,973,377
Ensembl chr16:36,641,284...36,973,475
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G
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Gpr158
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G protein-coupled receptor 158
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:25792749) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:25792749 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:83,777,625...84,244,428
Ensembl chr17:83,834,569...84,244,428
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G
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Igsf9
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immunoglobulin superfamily, member 9
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acts_upstream_of_or_within
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ISO IEA
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MGI:3784989 (PMID:24647940) GO_REF:0000107
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RGD Ensembl |
PMID:24647940 |
GO_REF:0000107 |
NCBI chr13:84,948,643...84,965,616
Ensembl chr13:84,948,619...84,965,607
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G
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Il10
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interleukin 10
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IDA
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RGD |
PMID:24278397 |
RGD:11049480 |
NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
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G
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Il10ra
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interleukin 10 receptor subunit alpha
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IMP
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RGD |
PMID:24278397 |
RGD:11049480 |
NCBI chr 8:54,459,754...54,474,786
Ensembl chr 8:45,563,137...45,578,061
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G
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Klk8
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kallikrein related-peptidase 8
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involved_in
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IEA ISO ISS
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GO_REF:0000107 (PMID:11273653) GO_REF:0000024
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Ensembl RGD UniProt |
PMID:11273653 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:94,251,803...94,258,646
Ensembl chr 1:94,251,803...94,258,646
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G
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Mecp2
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methyl CpG binding protein 2
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involved_in
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IDA IMP
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PMID:19442733
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SynGO |
PMID:19442733 PMID:19442733 |
RGD:11069248, RGD:11069248 |
NCBI chr X:156,932,481...156,995,981
Ensembl chr X:151,789,930...151,844,689
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G
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Nectin1
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nectin cell adhesion molecule 1
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involved_in
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IDA EXP
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PMID:11827984
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SynGO |
PMID:11827984 PMID:11827984 |
RGD:1599809, RGD:1599809 |
NCBI chr 8:52,998,662...53,061,745
Ensembl chr 8:44,101,776...44,189,787
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G
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Nedd4
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NEDD4 E3 ubiquitin protein ligase
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acts_upstream_of_or_within involved_in
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ISO IBA
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MGI:3529811 (PMID:19345204) GO_REF:0000033
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RGD GO_Central |
PMID:19345204 |
GO_REF:0000033 |
NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
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G
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Ptpro
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protein tyrosine phosphatase, receptor type, O
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involved_in
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ISO IEA
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(PMID:28871037) GO_REF:0000107
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RGD Ensembl |
PMID:28871037 |
GO_REF:0000107 |
NCBI chr 4:171,895,104...172,105,911
Ensembl chr 4:170,164,431...170,374,771
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G
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Ptprt
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protein tyrosine phosphatase, receptor type, T
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involved_in
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IMP IDA
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PMID:19816407
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SynGO |
PMID:19816407 PMID:19816407 |
RGD:13702429, RGD:13702429 |
NCBI chr 3:170,608,993...171,707,692
Ensembl chr 3:150,194,859...151,288,124
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G
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Rims3
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regulating synaptic membrane exocytosis 3
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involved_in
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IDA IMP
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PMID:23303958
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SynGO |
PMID:23303958 PMID:23303958 |
RGD:13702404, RGD:13702404 |
NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
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G
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Rims4
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regulating synaptic membrane exocytosis 4
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involved_in
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IMP IDA
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PMID:23303958
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SynGO |
PMID:23303958 PMID:23303958 |
RGD:13702404, RGD:13702404 |
NCBI chr 3:152,520,982...152,585,070
Ensembl chr 3:152,524,095...152,584,780
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G
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Septin11
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septin 11
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involved_in
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IMP IDA
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PMID:19380581
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SynGO |
PMID:19380581 PMID:19380581 |
RGD:13702154, RGD:13702154 |
NCBI chr14:14,844,759...14,990,856
Ensembl chr14:14,844,580...14,990,853
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G
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Slc7a11
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solute carrier family 7 member 11
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acts_upstream_of_or_within
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ISO
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MGI:3608695 (PMID:25429150)
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RGD |
PMID:25429150 |
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NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
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G
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Slitrk1
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SLIT and NTRK-like family, member 1
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involved_in
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IMP IDA
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PMID:27273464
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SynGO |
PMID:27273464 PMID:27273464 |
RGD:13702200, RGD:13702200 |
NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
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G
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Slitrk2
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SLIT and NTRK-like family, member 2
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involved_in
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ISO IEA
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(PMID:27273464) GO_REF:0000107
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RGD Ensembl |
PMID:27273464 |
GO_REF:0000107 |
NCBI chr X:145,246,448...145,259,983
Ensembl chr X:145,246,460...145,271,220
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G
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Slitrk4
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SLIT and NTRK-like family, member 4
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involved_in
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ISO
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(PMID:23345436)
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RGD |
PMID:23345436 |
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NCBI chr X:142,706,495...142,718,968
Ensembl chr X:142,706,338...142,718,575
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G
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Sparc
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secreted protein acidic and cysteine rich
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involved_in
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EXP IBA IDA
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PMID:21788491 GO_REF:0000033
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GO_Central |
PMID:21788491 PMID:21788491 |
GO_REF:0000033, RGD:13702385, RGD:13702385 |
NCBI chr10:40,017,065...40,038,816
Ensembl chr10:39,516,406...39,538,396
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G
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Sparcl1
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SPARC like 1
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involved_in
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EXP IBA IDA
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PMID:21788491 GO_REF:0000033
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GO_Central |
PMID:21788491 PMID:21788491 |
GO_REF:0000033, RGD:13702385, RGD:13702385 |
NCBI chr14:5,632,816...5,663,866
Ensembl chr14:5,632,569...5,663,865
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G
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Tnf
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tumor necrosis factor
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involved_in
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ISO
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(PMID:16547515)
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RGD |
PMID:16547515 |
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NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
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G
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Tuba1a
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tubulin, alpha 1A
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involved_in
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ISO
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(PMID:26658218)
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RGD |
PMID:26658218 |
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NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
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G
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Tubb5
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tubulin, beta 5 class I
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involved_in
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ISO IEA
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(PMID:24833723) GO_REF:0000107
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RGD Ensembl |
PMID:24833723 |
GO_REF:0000107 |
NCBI chr20:2,912,779...2,916,928
Ensembl chr20:2,912,778...2,916,940
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G
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Vcp
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valosin-containing protein
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involved_in
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IDA IMP
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PMID:22105171
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SynGO |
PMID:22105171 PMID:22105171 |
RGD:13702359, RGD:13702359 |
NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571
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G
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Wnt3a
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Wnt family member 3A
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involved_in
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ISO IEA
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(PMID:18986540) GO_REF:0000107
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RGD Ensembl |
PMID:18986540 |
GO_REF:0000107 |
NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324
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G
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Wnt5a
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Wnt family member 5A
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involved_in
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ISO IEA
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(PMID:18986540) GO_REF:0000107
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RGD Ensembl |
PMID:18986540 |
GO_REF:0000107 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Apoe
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apolipoprotein E
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acts_upstream_of_or_within
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ISO
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(PMID:24328732)
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RGD |
PMID:24328732 |
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NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932
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G
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Cfl1
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cofilin 1
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involved_in
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IMP NAS
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PMID:17360908
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RGD ARUK-UCL |
PMID:23974706 PMID:17360908 |
RGD:11570553, RGD:12793018 |
NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:202,786,627...202,817,587
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G
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Fyn
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FYN proto-oncogene, Src family tyrosine kinase
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involved_in
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IEA ISO
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GO_REF:0000107 UniProtKB:P04925|UniProtKB:Q01097 (PMID:22820466)
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Ensembl RGD |
PMID:22820466 |
GO_REF:0000107 |
NCBI chr20:44,322,635...44,514,498
Ensembl chr20:42,766,369...42,959,911
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G
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Grin2b
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glutamate ionotropic receptor NMDA type subunit 2B
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involved_in
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ISO
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UniProtKB:P04925|UniProtKB:P39688 (PMID:22820466)
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RGD |
PMID:22820466 |
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NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:168,599,546...169,042,279
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G
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Prnp
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prion protein
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involved_in
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ISO IEA
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ComplexPortal:CPX-1134|UniProtKB:P39688|UniProtKB:Q01097 (PMID:22820466), (PMID:24012003) GO_REF:0000107
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RGD Ensembl |
PMID:22820466 PMID:24012003 |
GO_REF:0000107 |
NCBI chr 3:139,639,076...139,654,420
Ensembl chr 3:119,177,485...119,203,937
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Dnm3
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dynamin 3
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IDA
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RGD |
PMID:17880892 |
RGD:8553820 |
NCBI chr13:76,892,381...77,371,346
Ensembl chr13:74,359,213...74,838,108
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G
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Dtnbp1
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dystrobrevin binding protein 1
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IMP IDA
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RGD |
PMID:20531346 PMID:20531346 |
RGD:11251757, RGD:11251757 |
NCBI chr17:19,891,313...19,982,770
Ensembl chr17:19,685,215...19,776,661
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G
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Efna1
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ephrin A1
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involved_in
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ISS ISO
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GO_REF:0000024 (PMID:17143272)
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UniProt RGD |
PMID:17143272 |
GO_REF:0000024 |
NCBI chr 2:176,979,434...176,988,675
Ensembl chr 2:174,681,682...174,690,866
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G
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Grm5
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glutamate metabotropic receptor 5
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IMP
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RGD |
PMID:25921744 |
RGD:598099551 |
NCBI chr 1:141,310,069...141,884,980
Ensembl chr 1:141,312,368...141,882,274
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G
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Ngef
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neuronal guanine nucleotide exchange factor
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involved_in
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ISS IEA ISO
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GO_REF:0000024 GO_REF:0000107 (PMID:17143272)
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UniProt Ensembl RGD |
PMID:17143272 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:88,146,956...88,244,454
Ensembl chr 9:88,146,956...88,244,914
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G
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Nlgn1
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neuroligin 1
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involved_in
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ISO ISS
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UniProtKB:Q99K10 (PMID:23143522) GO_REF:0000024
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RGD BHF-UCL |
PMID:23143522 |
GO_REF:0000024 |
NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464
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G
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Nlgn3
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neuroligin 3
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involved_in
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ISO
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(PMID:21808020)
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RGD |
PMID:21808020 |
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NCBI chr X:70,469,251...70,497,380
Ensembl chr X:66,429,458...66,451,876
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G
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Pten
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phosphatase and tensin homolog
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involved_in
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ISO
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(PMID:16675393)
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RGD |
PMID:16675393 |
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NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
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G
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Twf1
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twinfilin actin-binding protein 1
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IMP
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RGD |
PMID:33963280 |
RGD:596938166 |
NCBI chr 7:125,715,938...125,727,834
Ensembl chr 7:125,716,015...125,727,894
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G
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Ube3a
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ubiquitin protein ligase E3A
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IMP
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RGD |
PMID:25867122 |
RGD:11079590 |
NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Clstn3
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calsyntenin 3
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involved_in
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ISS ISO
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GO_REF:0000024 (PMID:35420982)
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UniProt RGD |
PMID:35420982 |
GO_REF:0000024 |
NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:157,331,494...157,364,769
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G
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Ptpn13
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protein tyrosine phosphatase, non-receptor type 13
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involved_in
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IDA IBA
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GO_REF:0000033
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GO_Central RGD |
PMID:23769722 |
GO_REF:0000033, RGD:152975632 |
NCBI chr14:6,108,202...6,282,619
Ensembl chr14:6,108,211...6,282,563
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Cbln1
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cerebellin 1 precursor
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involved_in
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ISS IEA ISO
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GO_REF:0000024 GO_REF:0000107 (PMID:24467251)
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UniProt Ensembl RGD |
PMID:24467251 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Ptn
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pleiotrophin
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IDA
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RGD |
PMID:7722643 |
RGD:9834945 |
NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Cfl1
|
cofilin 1
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IMP
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RGD |
PMID:26169356 |
RGD:11074527 |
NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:202,786,627...202,817,587
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Apoe
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apolipoprotein E
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involved_in
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ISO
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(PMID:24259049)
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RGD |
PMID:24259049 |
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NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932
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Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
App
|
amyloid beta precursor protein
|
acts_upstream_of_or_within
|
ISO
|
(PMID:30902970)
|
RGD |
PMID:30902970 |
|
NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561
|
|
G
|
Dkk1
|
dickkopf WNT signaling pathway inhibitor 1
|
involved_in
|
ISO IEA
|
(PMID:29643768) GO_REF:0000107
|
RGD Ensembl |
PMID:29643768 |
GO_REF:0000107 |
NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Epha7
|
Eph receptor A7
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:19036963)
|
Ensembl RGD |
PMID:19036963 |
GO_REF:0000107 |
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
|
|
G
|
Mdga1
|
MAM domain containing glycosylphosphatidylinositol anchor 1
|
|
IDA
|
|
RGD |
PMID:23358245 |
RGD:9743980 |
NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
|
|
G
|
Negr1
|
neuronal growth regulator 1
|
|
IDA
|
|
RGD |
PMID:19711485 |
RGD:596948412 |
NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730
|
|
G
|
Ptk2
|
protein tyrosine kinase 2
|
acts_upstream_of_or_within
|
ISO
|
MGI:1857596 (PMID:15378065)
|
RGD |
PMID:15378065 |
|
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
|
|
G
|
Rhoa
|
ras homolog family member A
|
|
IMP
|
|
RGD |
PMID:27893610 |
RGD:243048440 |
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
|
|
G
|
Robo1
|
roundabout guidance receptor 1
|
|
IMP
|
|
RGD |
PMID:27893610 |
RGD:243048440 |
NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203
|
|
G
|
Slit1
|
slit guidance ligand 1
|
involved_in
|
ISS
|
GO_REF:0000024
|
UniProt |
|
GO_REF:0000024 |
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
|
|
G
|
Tlr2
|
toll-like receptor 2
|
involved_in
|
ISO
|
UniProtKB:P05067|UniProtKB:P49768 (PMID:22198949)
|
RGD |
PMID:22198949 |
|
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630
|
|
G
|
Wnt5a
|
Wnt family member 5A
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:18986540)
|
Ensembl RGD |
PMID:18986540 |
GO_REF:0000107 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Arhgef15
|
Rho guanine nucleotide exchange factor 15
|
involved_in
|
ISO IEA
|
(PMID:21029865) GO_REF:0000107
|
RGD Ensembl |
PMID:21029865 |
GO_REF:0000107 |
NCBI chr10:53,650,521...53,663,269
Ensembl chr10:53,650,553...53,663,913
|
|
G
|
Neurod2
|
neuronal differentiation 2
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:19900895)
|
UniProt RGD |
PMID:19900895 |
GO_REF:0000024 |
NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
|
|
G
|
Nfatc4
|
nuclear factor of activated T-cells 4
|
acts_upstream_of_or_within
|
ISO
|
(PMID:23407945)
|
RGD |
PMID:23407945 |
|
NCBI chr15:33,256,912...33,284,522
Ensembl chr15:29,305,535...29,314,610
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Pgrmc1
|
progesterone receptor membrane component 1
|
involved_in
|
IGI
|
PMID:25390368
|
ARUK-UCL |
PMID:25390368 |
RGD:12910997 |
NCBI chr X:115,832,865...115,841,060
Ensembl chr X:115,832,884...115,888,682
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Gsk3b
|
glycogen synthase kinase 3 beta
|
involved_in
|
IMP
|
PMID:25764078
|
CACAO |
PMID:25764078 |
RGD:15023478 |
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Apoe
|
apolipoprotein E
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24328732) GO_REF:0000107
|
RGD Ensembl |
PMID:24328732 |
GO_REF:0000107 |
NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932
|
|
G
|
Erbb4
|
erb-b2 receptor tyrosine kinase 4
|
|
IMP
|
|
RGD |
PMID:30206770 |
RGD:405650589 |
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
|
|
G
|
Grin1
|
glutamate ionotropic receptor NMDA type subunit 1
|
involved_in
|
IGI
|
PMID:17360908
|
ARUK-UCL |
PMID:17360908 |
RGD:12793018 |
NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603
|
|
G
|
Ins2
|
insulin 2
|
involved_in
|
ISO
|
ComplexPortal:CPX-1134 (PMID:19188609)
|
RGD |
PMID:19188609 |
|
NCBI chr 1:207,272,738...207,421,998
Ensembl chr 1:197,843,281...197,864,775
|
|
G
|
Nedd9
|
neural precursor cell expressed, developmentally down-regulated 9
|
involved_in
|
ISO
|
(PMID:26683084)
|
RGD |
PMID:26683084 |
|
NCBI chr17:23,289,793...23,468,026
Ensembl chr17:23,282,326...23,468,019
|
|
G
|
Zfp804a
|
zinc finger protein 804A
|
involved_in
|
IMP
|
PMID:27837918
|
UniProt |
PMID:27837918 |
RGD:13210564 |
NCBI chr 3:67,033,481...67,267,769
Ensembl chr 3:67,034,170...67,263,607
|
|
G
|
Zmynd8
|
zinc finger, MYND-type containing 8
|
|
IMP
|
|
RGD |
PMID:24117785 |
RGD:8554267 |
NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Actr2
|
actin related protein 2
|
|
IMP
|
|
RGD |
PMID:23441206 |
RGD:11530033 |
NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
|
|
G
|
Actr3
|
actin related protein 3
|
|
IMP
|
|
RGD |
PMID:23441206 |
RGD:11530033 |
NCBI chr13:39,353,413...39,396,509
Ensembl chr13:36,800,093...36,844,124
|
|
G
|
Afdn
|
afadin, adherens junction formation factor
|
|
IMP
|
|
RGD |
PMID:22948147 |
RGD:13838731 |
NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:53,905,373...54,034,216
|
|
G
|
Baiap2
|
BAR/IMD domain containing adaptor protein 2
|
|
IMP
|
|
RGD |
PMID:15673667 |
RGD:9684988 |
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
|
|
G
|
Camk2b
|
calcium/calmodulin-dependent protein kinase II beta
|
involved_in
|
IMP
|
PMID:12873385
|
UniProt |
PMID:12873385 |
RGD:8553829 |
NCBI chr14:85,059,166...85,148,121
Ensembl chr14:80,845,238...80,933,994
|
|
G
|
Caprin1
|
cell cycle associated protein 1
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:20516077) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:20516077 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
|
|
G
|
Caprin2
|
caprin family member 2
|
involved_in
|
ISO
|
(PMID:20516077)
|
RGD |
PMID:20516077 |
|
NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830
|
|
G
|
Cask
|
calcium/calmodulin dependent serine protein kinase
|
|
IMP
|
|
RGD |
PMID:18606847 |
RGD:11576294 |
NCBI chr X:11,572,328...11,915,831
Ensembl chr X:8,899,833...9,238,694
|
|
G
|
Cux2
|
cut-like homeobox 2
|
involved_in
|
ISO
|
(PMID:20510857)
|
RGD |
PMID:20510857 |
|
NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
|
|
G
|
Dbn1
|
drebrin 1
|
involved_in
|
IMP ISO IBA ISS IEA
|
(PMID:25865831) GO_REF:0000033 GO_REF:0000024 GO_REF:0000107
|
RGD GO_Central UniProt Ensembl |
PMID:25865831 PMID:19174472 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:10398809 |
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
|
|
G
|
Dbnl
|
drebrin-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
|
|
G
|
Dhx36
|
DEAH-box helicase 36
|
involved_in
|
IMP
|
PMID:23651854
|
UniProt |
PMID:23651854 |
RGD:13792545 |
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
|
|
G
|
Dnm1l
|
dynamin 1-like
|
|
IMP
|
|
RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr11:98,084,049...98,135,663
Ensembl chr11:84,581,216...84,631,482
|
|
G
|
Eef2k
|
eukaryotic elongation factor-2 kinase
|
|
IMP
|
|
RGD |
PMID:20427644 |
RGD:10401235 |
NCBI chr 1:175,393,119...175,456,756
Ensembl chr 1:175,393,154...175,455,164
|
|
G
|
Ephb2
|
Eph receptor B2
|
|
IMP
|
|
RGD |
PMID:21364901 |
RGD:127285794 |
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059
|
|
G
|
Gprasp3
|
G protein-coupled receptor associated sorting protein family member 3
|
involved_in
|
ISO IEA
|
(PMID:21199326) GO_REF:0000107
|
RGD Ensembl |
PMID:21199326 |
GO_REF:0000107 |
NCBI chr X:98,847,591...98,854,949
Ensembl chr X:98,817,593...98,854,545
|
|
G
|
Il1rapl1
|
interleukin 1 receptor accessory protein-like 1
|
involved_in
|
ISO
|
(PMID:21940441)
|
RGD |
PMID:21940441 |
|
NCBI chr X:51,371,969...52,876,726
Ensembl chr X:51,378,215...52,876,772
|
|
G
|
Itpka
|
inositol-trisphosphate 3-kinase A
|
acts_upstream_of_or_within
|
IMP
|
PMID:19890013
|
MGI |
PMID:19890013 |
RGD:8553536 |
NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
|
|
G
|
Kalrn
|
kalirin, RhoGEF kinase
|
acts_upstream_of_or_within
|
ISO
|
MGI:4358076 (PMID:19625617)
|
RGD |
PMID:19625617 |
|
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
|
|
G
|
Lrp8
|
LDL receptor related protein 8
|
involved_in
|
ISO IEA
|
(PMID:21852430) GO_REF:0000107
|
RGD Ensembl |
PMID:21852430 |
GO_REF:0000107 |
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
|
|
G
|
Mapre3
|
microtubule-associated protein, RP/EB family, member 3
|
|
IDA
|
|
RGD |
PMID:31092585 |
RGD:597538596 |
NCBI chr 6:25,513,800...25,558,876
Ensembl chr 6:25,513,800...25,558,881
|
|
G
|
Marcks
|
myristoylated alanine rich protein kinase C substrate
|
|
IMP
|
|
RGD |
PMID:16202710 |
RGD:9685333 |
NCBI chr20:42,240,185...42,245,882
Ensembl chr20:40,685,315...40,691,012
|
|
G
|
Mfn1
|
mitofusin 1
|
|
IMP
|
|
RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr 2:117,240,525...117,288,017
Ensembl chr 2:115,313,401...115,359,640
|
|
G
|
Mfn2
|
mitofusin 2
|
|
IMP
|
|
RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342
|
|
G
|
Opa1
|
OPA1, mitochondrial dynamin like GTPase
|
|
IMP
|
|
RGD |
PMID:19605646 |
RGD:7800727 |
NCBI chr11:84,612,943...84,690,025
Ensembl chr11:71,109,873...71,185,109
|
|
G
|
Pafah1b1
|
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
|
involved_in
|
ISO IEA
|
(PMID:23483716) GO_REF:0000107
|
RGD Ensembl |
PMID:23483716 |
GO_REF:0000107 |
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
|
|
G
|
Pak3
|
p21 (RAC1) activated kinase 3
|
|
IMP
|
|
RGD |
PMID:18481281 |
RGD:7775053 |
NCBI chr X:111,912,967...112,171,037
Ensembl chr X:107,260,898...107,368,314
|
|
G
|
Ptprd
|
protein tyrosine phosphatase, receptor type, D
|
involved_in
|
ISO
|
(PMID:21940441)
|
RGD |
PMID:21940441 |
|
NCBI chr 5:90,046,993...90,698,977 NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
|
|
G
|
Reln
|
reelin
|
involved_in
|
ISO
|
(PMID:21664258), (PMID:21852430)
|
RGD |
PMID:21664258 PMID:21852430 |
|
NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211
|
|
G
|
Slc30a1
|
solute carrier family 30 member 1
|
|
IMP
|
|
RGD |
PMID:25319628 |
RGD:11057402 |
NCBI chr13:106,022,019...106,025,892
Ensembl chr13:103,491,037...103,494,910
|
|
G
|
Srcin1
|
SRC kinase signaling inhibitor 1
|
|
IDA
|
|
RGD |
PMID:31092585 |
RGD:597538596 |
NCBI chr10:82,502,911...82,569,882
Ensembl chr10:82,504,393...82,571,040
|
|
G
|
Stau2
|
staufen double-stranded RNA binding protein 2
|
|
IMP
|
|
RGD |
PMID:16418534 |
RGD:10043163 |
NCBI chr 5:7,623,528...7,868,206
Ensembl chr 5:2,840,765...3,084,929
|
|
G
|
Tiam1
|
TIAM Rac1 associated GEF 1
|
|
IMP
|
|
RGD |
PMID:16474385 |
RGD:10043325 |
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Sema4a
|
semaphorin 4A
|
involved_in
|
ISO IEA
|
(PMID:29981480) GO_REF:0000107
|
RGD Ensembl |
PMID:29981480 |
GO_REF:0000107 |
NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:173,896,439...173,914,442
|
|
G
|
Vstm5
|
V-set and transmembrane domain containing 5
|
involved_in
|
ISS ISO IBA
|
GO_REF:0000024 (PMID:27683913) GO_REF:0000033
|
UniProt RGD GO_Central |
PMID:27683913 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 8:12,080,019...12,100,443
Ensembl chr 8:12,080,203...12,100,427
|
|
G
|
Wnt7a
|
Wnt family member 7A
|
involved_in
|
ISO IEA
|
(PMID:21670302) GO_REF:0000107
|
RGD Ensembl |
PMID:21670302 |
GO_REF:0000107 |
NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Clstn3
|
calsyntenin 3
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:35420982)
|
UniProt RGD |
PMID:35420982 |
GO_REF:0000024 |
NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:157,331,494...157,364,769
|
|
G
|
Sema4a
|
semaphorin 4A
|
involved_in
|
ISO IEA
|
(PMID:29981480) GO_REF:0000107
|
RGD Ensembl |
PMID:29981480 |
GO_REF:0000107 |
NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:173,896,439...173,914,442
|
|
G
|
Sema4d
|
semaphorin 4D
|
involved_in
|
ISO IEA
|
(PMID:23699507), (PMID:29981480) GO_REF:0000107
|
RGD Ensembl |
PMID:23699507 PMID:29981480 |
GO_REF:0000107 |
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
C4h2orf81
|
similar to human chromosome 2 open reading frame 81
|
involved_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:115,661,617...115,667,929
Ensembl chr 4:115,661,638...115,703,815
|
|
G
|
Dctn1
|
dynactin subunit 1
|
involved_in
|
ISO IEA
|
(PMID:18364389) GO_REF:0000107
|
RGD Ensembl |
PMID:18364389 |
GO_REF:0000107 |
NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
|
|
G
|
Slc18a3
|
solute carrier family 18 member A3
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:19635813)
|
UniProt RGD |
PMID:19635813 |
GO_REF:0000024 |
NCBI chr16:7,713,630...7,716,491
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Efnb3
|
ephrin B3
|
|
IMP
|
|
RGD |
PMID:17626212 |
RGD:152995392 |
NCBI chr10:54,773,282...54,780,727
Ensembl chr10:54,274,506...54,280,471
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Nlgn1
|
neuroligin 1
|
involved_in
|
IDA
|
PMID:15797875
|
BHF-UCL |
PMID:15797875 |
RGD:8554205 |
NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464
|
|
G
|
Nrxn1
|
neurexin 1
|
involved_in
|
TAS
|
PMID:15797875
|
BHF-UCL |
PMID:15797875 |
RGD:8554205 |
NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:3,177,897...4,322,710
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Apoe
|
apolipoprotein E
|
involved_in
|
ISO
|
(PMID:24259049)
|
RGD |
PMID:24259049 |
|
NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932
|
|
G
|
Lrp4
|
LDL receptor related protein 4
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:22854782)
|
UniProt Ensembl RGD |
PMID:22854782 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Actr3
|
actin related protein 3
|
|
IMP
|
|
RGD |
PMID:18430734 |
RGD:2306201 |
NCBI chr13:39,353,413...39,396,509
Ensembl chr13:36,800,093...36,844,124
|
|
G
|
Adgrb1
|
adhesion G protein-coupled receptor B1
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 7:106,404,827...106,476,902
Ensembl chr 7:106,404,958...106,476,902
|
|
G
|
Adgrb2
|
adhesion G protein-coupled receptor B2
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 5:142,299,190...142,362,540
Ensembl chr 5:142,331,329...142,362,540
|
|
G
|
Adgrb3
|
adhesion G protein-coupled receptor B3
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
|
|
G
|
Adgre5
|
adhesion G protein-coupled receptor E5
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr19:24,397,972...24,418,648
Ensembl chr19:24,398,689...24,418,638
|
|
G
|
Adgrl1
|
adhesion G protein-coupled receptor L1
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr19:24,202,405...24,244,137
Ensembl chr19:24,204,360...24,244,139
|
|
G
|
Adgrl2
|
adhesion G protein-coupled receptor L2
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr 2:237,696,055...238,327,141
Ensembl chr 2:237,696,056...238,327,141
|
|
G
|
Adgrl3
|
adhesion G protein-coupled receptor L3
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr14:26,336,320...27,104,060
Ensembl chr14:26,368,277...27,105,860
|
|
G
|
Adnp
|
activity-dependent neuroprotector homeobox
|
|
IDA
|
|
RGD |
PMID:15800376 |
RGD:2312779 |
NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
|
|
G
|
Amigo1
|
adhesion molecule with Ig like domain 1
|
acts_upstream_of_or_within involved_in
|
ISO IEA IBA
|
(PMID:24613359) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
|
|
G
|
Amigo2
|
adhesion molecule with Ig like domain 2
|
acts_upstream_of_or_within involved_in
|
ISO IEA IBA
|
(PMID:24613359) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695
|
|
G
|
Amigo3
|
adhesion molecule with Ig like domain 3
|
acts_upstream_of_or_within involved_in
|
ISO IEA IBA
|
(PMID:24613359) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:108,741,899...108,743,425
Ensembl chr 8:108,693,060...108,744,555
|
|
G
|
Asic2
|
acid sensing ion channel subunit 2
|
acts_upstream_of_or_within
|
ISO
|
MGI:2180111 (PMID:19571134)
|
RGD |
PMID:19571134 |
|
NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
|
|
G
|
Bdnf
|
brain-derived neurotrophic factor
|
involved_in
|
ISO IEA
|
(PMID:19036963) GO_REF:0000107
|
RGD Ensembl |
PMID:19036963 |
GO_REF:0000107 |
NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:96,165,042...96,215,615
|
|
G
|
Cbln1
|
cerebellin 1 precursor
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1096391 (PMID:21356198) GO_REF:0000107
|
RGD Ensembl |
PMID:21356198 |
GO_REF:0000107 |
NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
|
|
G
|
Cbln2
|
cerebellin 2 precursor
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:21356198) GO_REF:0000107
|
RGD Ensembl |
PMID:21356198 |
GO_REF:0000107 |
NCBI chr18:79,940,412...79,948,766
Ensembl chr18:79,942,590...79,947,855
|
|
G
|
Clstn1
|
calsyntenin 1
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 MGI:1929897|MGI:2178323 (PMID:24613359)
|
GO_Central Ensembl RGD |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583
|
|
G
|
Clstn2
|
calsyntenin 2
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 MGI:1929895|MGI:2178323 (PMID:24613359)
|
GO_Central Ensembl RGD |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:98,020,406...98,637,232
Ensembl chr 8:98,021,666...98,637,731
|
|
G
|
Clstn3
|
calsyntenin 3
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 MGI:1929895|MGI:1929897 (PMID:24613359)
|
GO_Central Ensembl RGD |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:157,331,494...157,364,769
|
|
G
|
Cux2
|
cut-like homeobox 2
|
involved_in
|
ISO
|
(PMID:20510857)
|
RGD |
PMID:20510857 |
|
NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
|
|
G
|
Dlg4
|
discs large MAGUK scaffold protein 4
|
|
IMP
|
|
RGD |
PMID:26738857 |
RGD:243048441 |
NCBI chr10:55,239,397...55,267,780
Ensembl chr10:54,739,470...54,767,153
|
|
G
|
Dlg5
|
discs large MAGUK scaffold protein 5
|
involved_in
|
ISO IEA
|
(PMID:25232112) GO_REF:0000107
|
RGD Ensembl |
PMID:25232112 |
GO_REF:0000107 |
NCBI chr15:125,287...237,334
Ensembl chr15:75,786...187,837
|
|
G
|
Eef2k
|
eukaryotic elongation factor-2 kinase
|
|
IMP
|
|
RGD |
PMID:20427644 |
RGD:10401235 |
NCBI chr 1:175,393,119...175,456,756
Ensembl chr 1:175,393,154...175,455,164
|
|
G
|
Efna5
|
ephrin A5
|
involved_in
|
ISO
|
(PMID:19036963)
|
RGD |
PMID:19036963 |
|
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
|
|
G
|
Ephb1
|
Eph receptor B1
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:14691139)
|
UniProt Ensembl RGD |
PMID:14691139 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
|
|
G
|
Ephb2
|
Eph receptor B2
|
involved_in
|
IMP IEA ISO
|
GO_REF:0000107 (PMID:14691139), (PMID:21029865)
|
Ensembl RGD |
PMID:14691139 PMID:21029865 PMID:21364901 |
GO_REF:0000107, RGD:127285794 |
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059
|
|
G
|
Ephb3
|
Eph receptor B3
|
involved_in
|
ISO IEA
|
(PMID:14691139) GO_REF:0000107
|
RGD Ensembl |
PMID:14691139 |
GO_REF:0000107 |
NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370
|
|
G
|
Flrt1
|
fibronectin leucine rich transmembrane protein 1
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr 1:204,275,785...204,292,844
Ensembl chr 1:204,275,367...204,353,750
|
|
G
|
Flrt2
|
fibronectin leucine rich transmembrane protein 2
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
|
|
G
|
Flrt3
|
fibronectin leucine rich transmembrane protein 3
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 3:148,448,115...148,461,458
Ensembl chr 3:127,994,226...128,007,841
|
|
G
|
Ghrl
|
ghrelin and obestatin prepropeptide
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:16491079) GO_REF:0000107 MGI:3045041 (PMID:16491079)
|
RGD Ensembl |
PMID:16491079 |
GO_REF:0000107 |
NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
|
|
G
|
Gprasp3
|
G protein-coupled receptor associated sorting protein family member 3
|
involved_in
|
ISO IEA
|
(PMID:21199326) GO_REF:0000107
|
RGD Ensembl |
PMID:21199326 |
GO_REF:0000107 |
NCBI chr X:98,847,591...98,854,949
Ensembl chr X:98,817,593...98,854,545
|
|
G
|
Grid2
|
glutamate ionotropic receptor delta type subunit 2
|
involved_in
|
ISO IEA
|
(PMID:27418511) GO_REF:0000107
|
RGD Ensembl |
PMID:27418511 |
GO_REF:0000107 |
NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
|
|
G
|
Il1rap
|
interleukin 1 receptor accessory protein
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:25908590)
|
UniProt RGD |
PMID:25908590 |
GO_REF:0000024 |
NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
|
|
G
|
Il1rapl1
|
interleukin 1 receptor accessory protein-like 1
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:25908590)
|
UniProt RGD |
PMID:25908590 |
GO_REF:0000024 |
NCBI chr X:51,371,969...52,876,726
Ensembl chr X:51,378,215...52,876,772
|
|
G
|
Iqsec1
|
IQ motif and Sec7 domain ArfGEF 1
|
|
IMP
|
|
RGD |
PMID:26884337 |
RGD:11560558 |
NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172
|
|
G
|
Iqsec2
|
IQ motif and Sec7 domain ArfGEF 2
|
|
IMP
|
|
RGD |
PMID:26884337 |
RGD:11560558 |
NCBI chr X:24,734,202...24,816,566
Ensembl chr X:21,254,914...21,336,584
|
|
G
|
Lingo2
|
leucine rich repeat and Ig domain containing 2
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr 5:50,370,744...51,687,252
Ensembl chr 5:50,367,101...50,516,956
|
|
G
|
Lingo4
|
leucine rich repeat and Ig domain containing 4
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 2:182,035,522...182,040,787
Ensembl chr 2:182,014,326...182,040,787
|
|
G
|
Lrrc24
|
leucine rich repeat containing 24
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 7:108,437,296...108,444,561
Ensembl chr 7:108,437,296...108,444,438
|
|
G
|
Lrrc4b
|
leucine rich repeat containing 4B
|
involved_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:21940441)
|
GO_Central Ensembl RGD |
PMID:21940441 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
|
|
G
|
Lrrn1
|
leucine rich repeat neuronal 1
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 4:140,476,752...140,520,210
Ensembl chr 4:140,476,324...140,518,620
|
|
G
|
Lrrn3
|
leucine rich repeat neuronal 3
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 6:58,489,060...58,520,322
Ensembl chr 6:58,489,010...58,520,330
|
|
G
|
Lrrtm1
|
leucine rich repeat transmembrane neuronal 1
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
|
|
G
|
Lrrtm2
|
leucine rich repeat transmembrane neuronal 2
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864
|
|
G
|
Lrrtm3
|
leucine rich repeat transmembrane neuronal 3
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr20:24,515,627...24,689,669
Ensembl chr20:24,515,627...24,689,669
|
|
G
|
Lrrtm4
|
leucine rich repeat transmembrane neuronal 4
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
|
|
G
|
Lrtm1
|
leucine-rich repeats and transmembrane domains 1
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr16:4,210,343...4,217,843
|
|
G
|
Lrtm2
|
leucine-rich repeats and transmembrane domains 2
|
acts_upstream_of_or_within involved_in
|
ISO IEA
|
(PMID:24613359) GO_REF:0000117 GO_REF:0000107
|
RGD UniProt Ensembl |
PMID:24613359 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 4:152,485,863...152,508,248
Ensembl chr 4:152,485,866...152,500,377
|
|
G
|
Nlgn1
|
neuroligin 1
|
involved_in acts_upstream_of_or_within
|
IDA ISO
|
PMID:17582332 (PMID:21356198) (PMID:24613359) PMID:15797875
|
RGD |
PMID:21356198 PMID:24613359 PMID:17582332 PMID:15797875 |
RGD:8553502, RGD:8554205 |
NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464
|
|
G
|
Nlgn2
|
neuroligin 2
|
involved_in
|
IDA
|
PMID:15797875
|
BHF-UCL |
PMID:15797875 |
RGD:8554205 |
NCBI chr10:55,042,175...55,056,578
Ensembl chr10:54,544,588...54,558,434
|
|
G
|
Nlgn3
|
neuroligin 3
|
involved_in
|
IDA ISO
|
PMID:15797875 (PMID:21642956)
|
RGD |
PMID:21642956 PMID:15797875 |
RGD:8554205 |
NCBI chr X:70,469,251...70,497,380
Ensembl chr X:66,429,458...66,451,876
|
|
G
|
Nrxn1
|
neurexin 1
|
involved_in acts_upstream_of_or_within
|
ISS IEA ISO TAS
|
GO_REF:0000024 GO_REF:0000107 MGI:88281|MGI:88282 (PMID:21356198) PMID:15797875
|
BHF-UCL Ensembl RGD |
PMID:21356198 PMID:15797875 |
GO_REF:0000024 GO_REF:0000107, RGD:8554205 |
NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:3,177,897...4,322,710
|
|
G
|
Ntrk1
|
neurotrophic receptor tyrosine kinase 1
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:173,236,963...173,253,770
|
|
G
|
Ntrk2
|
neurotrophic receptor tyrosine kinase 2
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr17:5,560,558...5,875,899
Ensembl chr17:5,559,043...5,869,136
|
|
G
|
Ntrk3
|
neurotrophic receptor tyrosine kinase 3
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:24613359) GO_REF:0000107
|
RGD Ensembl |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:132,132,849...132,503,286
|
|
G
|
Opcml
|
opioid binding protein/cell adhesion molecule-like
|
|
IDA
|
|
RGD |
PMID:19711485 |
RGD:596948412 |
NCBI chr 8:34,451,629...35,562,897
Ensembl chr 8:26,192,841...27,300,620
|
|
G
|
Oxt
|
oxytocin/neurophysin I prepropeptide
|
|
IDA
|
|
RGD |
PMID:16488155 |
RGD:2304173 |
NCBI chr 3:138,235,754...138,236,594
Ensembl chr 3:117,782,650...117,783,490
|
|
G
|
Oxtr
|
oxytocin receptor
|
|
IMP
|
|
RGD |
PMID:16488155 |
RGD:2304173 |
NCBI chr 4:147,154,374...147,171,723
Ensembl chr 4:145,599,561...145,614,674
|
|
G
|
Pik3r1
|
phosphoinositide-3-kinase regulatory subunit 1
|
involved_in
|
IDA
|
PMID:21414895
|
CACAO |
PMID:21414895 |
RGD:15023480 |
NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631
|
|
G
|
Prkca
|
protein kinase C, alpha
|
|
IMP
|
|
RGD |
PMID:18073185 |
RGD:2293299 |
NCBI chr10:93,388,991...93,787,617
Ensembl chr10:92,894,012...93,288,012
|
|
G
|
Ptprd
|
protein tyrosine phosphatase, receptor type, D
|
involved_in
|
ISO
|
(PMID:25908590), (PMID:25989451)
|
RGD |
PMID:25908590 PMID:25989451 |
|
NCBI chr 5:90,046,993...90,698,977 NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
|
|
G
|
Slit2
|
slit guidance ligand 2
|
|
IMP
|
|
RGD |
PMID:26738857 |
RGD:243048441 |
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
|
|
G
|
Slitrk1
|
SLIT and NTRK-like family, member 1
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000117 GO_REF:0000107 (PMID:24613359)
|
GO_Central UniProt Ensembl RGD |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 |
NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
|
|
G
|
Slitrk2
|
SLIT and NTRK-like family, member 2
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000117 GO_REF:0000107 (PMID:25989451) (PMID:24613359)
|
GO_Central UniProt Ensembl RGD |
PMID:24613359 PMID:25989451 |
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 |
NCBI chr X:145,246,448...145,259,983
Ensembl chr X:145,246,460...145,271,220
|
|
G
|
Slitrk3
|
SLIT and NTRK-like family, member 3
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000117 (PMID:24613359)
|
GO_Central UniProt RGD |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000117 |
NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
|
|
G
|
Slitrk4
|
SLIT and NTRK-like family, member 4
|
acts_upstream_of_or_within involved_in
|
ISO IEA IBA
|
(PMID:24613359) GO_REF:0000117 GO_REF:0000033
|
RGD UniProt GO_Central |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000117 |
NCBI chr X:142,706,495...142,718,968
Ensembl chr X:142,706,338...142,718,575
|
|
G
|
Slitrk5
|
SLIT and NTRK-like family, member 5
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000117 (PMID:24613359)
|
GO_Central UniProt RGD |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000117 |
NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836
|
|
G
|
Slitrk6
|
SLIT and NTRK-like family, member 6
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 (PMID:24613359)
|
GO_Central Ensembl UniProt RGD |
PMID:24613359 |
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 |
NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
|
|
G
|
Srpx2
|
sushi-repeat-containing protein, X-linked 2
|
involved_in
|
ISO IEA IBA IDA
|
(PMID:24179158) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:24179158 PMID:24179158 |
GO_REF:0000033 GO_REF:0000107, RGD:8553698 |
NCBI chr X:97,106,455...97,132,197
Ensembl chr X:97,106,561...97,132,195
|
|
G
|
St8sia2
|
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
|
|
IMP
|
|
RGD |
PMID:16887122 |
RGD:27372880 |
NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091
|
|
G
|
Stau2
|
staufen double-stranded RNA binding protein 2
|
|
IMP
|
|
RGD |
PMID:16418534 |
RGD:10043163 |
NCBI chr 5:7,623,528...7,868,206
Ensembl chr 5:2,840,765...3,084,929
|
|
G
|
Syndig1
|
synapse differentiation inducing 1
|
involved_in
|
ISO IEA IBA IMP
|
(PMID:20152115) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:20152115 PMID:20152115 |
GO_REF:0000033 GO_REF:0000107, RGD:8554654 |
NCBI chr 3:138,030,995...138,234,646
Ensembl chr 3:138,031,769...138,198,122
|
|
G
|
Thbs2
|
thrombospondin 2
|
|
IMP
|
|
RGD |
PMID:15707899 |
RGD:1580068 |
NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789
|
|
G
|
Tpbg
|
trophoblast glycoprotein
|
acts_upstream_of_or_within
|
ISO
|
(PMID:24613359)
|
RGD |
PMID:24613359 |
|
NCBI chr 8:86,793,953...86,797,324
Ensembl chr 8:86,793,749...86,797,741
|
|
G
|
Ube2v2
|
ubiquitin conjugating enzyme E2 V2
|
|
IMP
|
|
RGD |
PMID:12750002 |
RGD:1299567 |
NCBI chr11:98,808,681...98,842,583
Ensembl chr11:85,304,526...85,336,369
|
|
G
|
Wnt7a
|
Wnt family member 7A
|
involved_in acts_upstream_of_or_within
|
ISO IEA
|
(PMID:18986540) GO_REF:0000107 (PMID:9405095)
|
RGD Ensembl |
PMID:9405095 PMID:18986540 |
GO_REF:0000107 |
NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Anapc2
|
anaphase promoting complex subunit 2
|
involved_in
|
ISO IEA
|
(PMID:19900895) GO_REF:0000107
|
RGD Ensembl |
PMID:19900895 |
GO_REF:0000107 |
NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
|
|
G
|
Camk2b
|
calcium/calmodulin-dependent protein kinase II beta
|
involved_in
|
IMP
|
PMID:12873385
|
UniProt |
PMID:12873385 |
RGD:8553829 |
NCBI chr14:85,059,166...85,148,121
Ensembl chr14:80,845,238...80,933,994
|
|
G
|
Cdc20
|
cell division cycle 20
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:19900895) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:19900895 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:137,251,596...137,255,799
Ensembl chr 5:131,966,215...131,970,512
|
|
G
|
Dab2ip
|
DAB2 interacting protein
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:23326475)
|
UniProt Ensembl RGD |
PMID:23326475 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
|
|
G
|
Hnrnpk
|
heterogeneous nuclear ribonucleoprotein K
|
|
IMP
|
|
RGD |
PMID:22102872 |
RGD:10002783 |
NCBI chr17:6,269,302...6,280,429
Ensembl chr17:6,262,998...6,274,997
|
|
G
|
Neurl1
|
neuralized E3 ubiquitin protein ligase 1
|
involved_in
|
ISO IEA
|
(PMID:22153079) GO_REF:0000107
|
RGD Ensembl |
PMID:22153079 |
GO_REF:0000107 |
NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903
|
|
G
|
Neurod2
|
neuronal differentiation 2
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:16504944)
|
UniProt RGD |
PMID:16504944 |
GO_REF:0000024 |
NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
|
|
G
|
Nrxn1
|
neurexin 1
|
involved_in acts_upstream_of_or_within
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:19567877)
|
BHF-UCL Ensembl RGD |
PMID:19567877 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:3,177,897...4,322,710
|
|
G
|
Reln
|
reelin
|
involved_in
|
ISO
|
(PMID:17229826)
|
RGD |
PMID:17229826 |
|
NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Trem2
|
triggering receptor expressed on myeloid cells 2
|
involved_in
|
ISO IEA
|
(PMID:33097708) GO_REF:0000107
|
RGD Ensembl |
PMID:33097708 |
GO_REF:0000107 |
NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Camk1
|
calcium/calmodulin-dependent protein kinase I
|
involved_in
|
ISO IEA ISS
|
(PMID:18184567) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:18184567 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
|
|
G
|
Cdc42
|
cell division cycle 42
|
|
IMP
|
|
RGD |
PMID:21423166 |
RGD:5688281 |
NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111
|
|
G
|
Frmpd4
|
FERM and PDZ domain containing 4
|
involved_in
|
ISO
|
(PMID:19118189)
|
RGD |
PMID:19118189 |
|
NCBI chr X:25,853,849...26,814,642
Ensembl chr X:25,853,934...26,814,637
|
|
G
|
Shank3
|
SH3 and multiple ankyrin repeat domains 3
|
involved_in
|
IEA ISO ISS
|
GO_REF:0000107 (PMID:21167025) GO_REF:0000024
|
Ensembl RGD BHF-UCL |
PMID:21167025 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:120,570,402...120,630,374
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Agrn
|
agrin
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:10402191)
|
UniProt RGD |
PMID:10402191 |
GO_REF:0000024 |
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
|
|
G
|
Gsk3b
|
glycogen synthase kinase 3 beta
|
involved_in
|
IMP
|
PMID:25764078
|
CACAO |
PMID:25764078 |
RGD:15023478 |
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
|
|
G
|
Musk
|
muscle associated receptor tyrosine kinase
|
|
IMP
|
|
RGD |
PMID:14749715 |
RGD:2317108 |
NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Abhd17b
|
abhydrolase domain containing 17B, depalmitoylase
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:27307232)
|
Ensembl RGD |
PMID:27307232 |
GO_REF:0000107 |
NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933
|
|
G
|
App
|
amyloid beta precursor protein
|
involved_in
|
ISO
|
ComplexPortal:CPX-1134 (PMID:23921129)
|
RGD |
PMID:23921129 |
|
NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561
|
|
G
|
Fcgr2b
|
Fc gamma receptor 2B
|
involved_in
|
ISO
|
UniProtKB:P05067-PRO_0000000092 (PMID:23921129)
|
RGD |
PMID:23921129 |
|
NCBI chr13:85,725,897...85,740,517
Ensembl chr13:83,193,163...83,207,778
|
|
G
|
Homer1
|
homer scaffold protein 1
|
involved_in
|
IMP ISS
|
PMID:19345194 GO_REF:0000024
|
UniProt |
PMID:19345194 |
GO_REF:0000024, RGD:8553291 |
NCBI chr 2:26,279,012...26,388,279
Ensembl chr 2:24,543,093...24,644,785
|
|
G
|
Vps35
|
VPS35 retromer complex component
|
involved_in
|
ISO
|
(PMID:26618722)
|
RGD |
PMID:26618722 |
|
NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Abi2
|
abl-interactor 2
|
involved_in
|
ISO
|
(PMID:15572692)
|
RGD |
PMID:15572692 |
|
NCBI chr 9:69,321,072...69,490,630
Ensembl chr 9:61,827,139...61,905,699
|
|
G
|
Abi3bp
|
ABI family member 3 binding protein
|
involved_in
|
IMP
|
PMID:22485184
|
ARUK-UCL |
PMID:22485184 |
RGD:42721990 |
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
|
|
G
|
Adam10
|
ADAM metallopeptidase domain 10
|
|
IMP
|
|
RGD |
PMID:22328515 |
RGD:13703034 |
NCBI chr 8:80,226,862...80,358,728
Ensembl chr 8:71,345,837...71,477,889
|
|
G
|
Arc
|
activity-regulated cytoskeleton-associated protein
|
involved_in
|
IGI
|
PMID:15537891
|
ARUK-UCL |
PMID:15537891 |
RGD:13210528 |
NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
|
|
G
|
Arhgap33
|
Rho GTPase activating protein 33
|
|
IMP
|
|
RGD |
PMID:24003235 |
RGD:13508596 |
NCBI chr 1:85,776,112...85,789,767
Ensembl chr 1:85,776,108...85,789,678
|
|
G
|
Arhgap44
|
Rho GTPase activating protein 44
|
involved_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:24352656)
|
GO_Central Ensembl RGD |
PMID:24352656 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:49,655,583...49,822,876
Ensembl chr10:49,655,584...49,824,297
|
|
G
|
Cdk5
|
cyclin-dependent kinase 5
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:17143272) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:17143272 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
|
|
G
|
Cdk5r1
|
cyclin-dependent kinase 5 regulatory subunit 1
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:17143272)
|
UniProt RGD |
PMID:17143272 |
GO_REF:0000024 |
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
|
|
G
|
Cfl1
|
cofilin 1
|
involved_in
|
ISO IEA ISS
|
(PMID:24464040) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl ParkinsonsUK-UCL |
PMID:24464040 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:202,786,627...202,817,587
|
|
G
|
Dnm3
|
dynamin 3
|
|
IMP
|
|
RGD |
PMID:15741233 |
RGD:8554738 |
NCBI chr13:76,892,381...77,371,346
Ensembl chr13:74,359,213...74,838,108
|
|
G
|
Epha4
|
Eph receptor A4
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:17143272)
|
UniProt Ensembl RGD |
PMID:17143272 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139
|
|
G
|
Kif1a
|
kinesin family member 1A
|
involved_in
|
IMP
|
PMID:30021165
|
UniProt |
PMID:30021165 |
RGD:14995321 |
NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
|
|
G
|
Lrrk2
|
leucine-rich repeat kinase 2
|
involved_in
|
ISO IEA ISS
|
(PMID:21168496) GO_REF:0000107 UniProtKB:P23528 (PMID:24464040) GO_REF:0000024
|
RGD Ensembl ParkinsonsUK-UCL |
PMID:21168496 PMID:24464040 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:124,706,246...124,867,234
Ensembl chr 7:122,826,696...122,987,703
|
|
G
|
Lzts3
|
leucine zipper tumor suppressor family member 3
|
involved_in
|
IMP IBA
|
PMID:27252646 GO_REF:0000033
|
GO_Central |
PMID:27252646 |
GO_REF:0000033, RGD:13210540 |
NCBI chr 3:138,303,378...138,313,645
Ensembl chr 3:117,851,702...117,860,081
|
|
G
|
Nlgn3
|
neuroligin 3
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:21808020)
|
BHF-UCL RGD |
PMID:21808020 PMID:21808020 |
GO_REF:0000024, RGD:8553412 |
NCBI chr X:70,469,251...70,497,380
Ensembl chr X:66,429,458...66,451,876
|
|
G
|
Pdlim5
|
PDZ and LIM domain 5
|
involved_in
|
IDA
|
PMID:19900557
|
UniProt |
PMID:19900557 |
RGD:8554803 |
NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
|
|
G
|
Ppfia2
|
PTPRF interacting protein alpha 2
|
involved_in
|
ISO IEA
|
(PMID:30021165) GO_REF:0000107
|
RGD Ensembl |
PMID:30021165 |
GO_REF:0000107 |
NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
|
|
G
|
Ppp1r9a
|
protein phosphatase 1, regulatory subunit 9A
|
|
IMP
|
|
RGD |
PMID:15473970 |
RGD:10043779 |
NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
|
|
G
|
Shank3
|
SH3 and multiple ankyrin repeat domains 3
|
involved_in
|
IEA ISO ISS
|
GO_REF:0000107 (PMID:21795692)
|
Ensembl RGD |
PMID:21795692 PMID:21795692 |
GO_REF:0000107, RGD:7349315 |
NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:120,570,402...120,630,374
|
|
G
|
Sipa1l1
|
signal-induced proliferation-associated 1 like 1
|
involved_in
|
IDA
|
PMID:11502259
|
UniProt |
PMID:11502259 |
RGD:8554032 |
NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
|
|
G
|
Smad3
|
SMAD family member 3
|
|
IMP
|
|
RGD |
PMID:26030849 |
RGD:597830060 |
NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960
|
|
G
|
Srcin1
|
SRC kinase signaling inhibitor 1
|
involved_in
|
ISO IBA ISS
|
(PMID:19146815) GO_REF:0000033 GO_REF:0000024
|
RGD GO_Central UniProt |
PMID:19146815 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr10:82,502,911...82,569,882
Ensembl chr10:82,504,393...82,571,040
|
|
G
|
Tanc2
|
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
|
involved_in
|
IMP IBA
|
PMID:30021165 GO_REF:0000033
|
GO_Central |
PMID:30021165 |
GO_REF:0000033, RGD:14995321 |
NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756
|
|
G
|
Zdhhc15
|
zinc finger DHHC-type palmitoyltransferase 15
|
involved_in
|
IMP
|
PMID:31189538
|
UniProt |
PMID:31189538 |
RGD:25671406 |
NCBI chr X:69,568,086...69,701,756
Ensembl chr X:69,574,124...69,701,756
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Clstn3
|
calsyntenin 3
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:32434929)
|
UniProt RGD |
PMID:32434929 |
GO_REF:0000024 |
NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:157,331,494...157,364,769
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Kcnk13
|
potassium two pore domain channel subfamily K member 13
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:34642249) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:34642249 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:124,970,363...125,074,919
Ensembl chr 6:119,242,188...119,345,240
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lhfpl4
|
LHFPL tetraspan subfamily member 4
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:29742426)
|
UniProt Ensembl RGD |
PMID:29742426 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:146,317,110...146,340,073
Ensembl chr 4:146,313,541...146,340,463
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Amot
|
angiomotin
|
involved_in
|
IDA IMP
|
PMID:29317530
|
SynGO |
PMID:29317530 PMID:29317530 |
RGD:405650325, RGD:405650325 |
NCBI chr X:113,778,990...113,837,846
Ensembl chr X:108,984,022...109,041,272
|
|
G
|
Baiap2
|
BAR/IMD domain containing adaptor protein 2
|
involved_in
|
IMP IDA
|
PMID:15673667
|
SynGO |
PMID:15673667 PMID:15673667 |
RGD:9684988, RGD:9684988 |
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
|
|
G
|
Cap2
|
cyclase associated actin cytoskeleton regulatory protein 2
|
involved_in
|
IMP IDA
|
PMID:33094279
|
SynGO |
PMID:33094279 PMID:33094279 |
RGD:405650308, RGD:405650308 |
NCBI chr17:18,054,234...18,203,453
Ensembl chr17:18,054,431...18,203,373
|
|
G
|
Cttnbp2
|
cortactin binding protein 2
|
involved_in
|
IMP IDA
|
PMID:22262902
|
SynGO |
PMID:22262902 PMID:22262902 |
RGD:13702362, RGD:13702362 |
NCBI chr 4:46,800,975...46,964,681
Ensembl chr 4:46,800,981...46,964,631
|
|
G
|
Cyfip1
|
cytoplasmic FMR1 interacting protein 1
|
involved_in
|
ISO
|
(PMID:24050404)
|
RGD |
PMID:24050404 |
|
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
|
|
G
|
Dip2a
|
disco-interacting protein 2 homolog A
|
involved_in
|
ISO
|
(PMID:31600191)
|
RGD |
PMID:31600191 |
|
NCBI chr20:12,284,566...12,371,068
Ensembl chr20:12,284,654...12,370,217
|
|
G
|
Itsn1
|
intersectin 1
|
involved_in
|
IDA IMP
|
PMID:19258322
|
SynGO |
PMID:19258322 PMID:19258322 |
RGD:13461864, RGD:13461864 |
NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
|
|
G
|
Kalrn
|
kalirin, RhoGEF kinase
|
involved_in
|
IDA IMP
|
PMID:18031682
|
SynGO |
PMID:18031682 PMID:18031682 |
RGD:12050112, RGD:12050112 |
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
|
|
G
|
Limk1
|
LIM domain kinase 1
|
involved_in
|
IDA IMP
|
PMID:25884247
|
SynGO |
PMID:25884247 PMID:25884247 |
RGD:405650283, RGD:405650283 |
NCBI chr12:27,663,177...27,697,085
Ensembl chr12:22,026,672...22,060,606
|
|
G
|
Marcks
|
myristoylated alanine rich protein kinase C substrate
|
involved_in
|
IDA IMP
|
PMID:16202710
|
SynGO |
PMID:16202710 PMID:16202710 |
RGD:9685333, RGD:9685333 |
NCBI chr20:42,240,185...42,245,882
Ensembl chr20:40,685,315...40,691,012
|
|
G
|
Myh10
|
myosin heavy chain 10
|
involved_in
|
IDA IMP
|
PMID:20797537
|
SynGO |
PMID:20797537 PMID:20797537 |
RGD:12050124, RGD:12050124 |
NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
|
|
G
|
Prmt8
|
protein arginine methyltransferase 8
|
involved_in
|
ISO
|
(PMID:32521269)
|
RGD |
PMID:32521269 |
|
NCBI chr 4:160,535,813...160,618,193
Ensembl chr 4:160,535,813...160,617,930
|
|
G
|
Ptk2
|
protein tyrosine kinase 2
|
involved_in
|
ISO
|
(PMID:19553453)
|
RGD |
PMID:19553453 |
|
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
|
|
G
|
Rhoa
|
ras homolog family member A
|
involved_in
|
ISO IEA
|
(PMID:21423166) GO_REF:0000107
|
RGD Ensembl |
PMID:21423166 |
GO_REF:0000107 |
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
|
|
G
|
Tiam1
|
TIAM Rac1 associated GEF 1
|
involved_in
|
IMP IDA
|
PMID:15721239
|
SynGO |
PMID:15721239 PMID:15721239 |
RGD:12050147, RGD:12050147 |
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Agap1
|
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
|
involved_in
|
IMP IDA
|
PMID:27713690
|
SynGO |
PMID:27713690 PMID:27713690 |
RGD:405650302, RGD:405650302 |
NCBI chr 9:90,039,720...90,475,196
Ensembl chr 9:90,039,605...90,470,958
|
|
G
|
Ank3
|
ankyrin 3
|
involved_in
|
IMP IDA
|
PMID:25374361
|
SynGO |
PMID:25374361 PMID:25374361 |
RGD:405650220, RGD:405650220 |
NCBI chr20:18,601,307...19,224,790
Ensembl chr20:18,602,786...19,086,300
|
|
G
|
Camkv
|
CaM kinase-like vesicle-associated
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:27796283)
|
Ensembl RGD |
PMID:27796283 |
GO_REF:0000107 |
NCBI chr 8:108,626,821...108,641,169
Ensembl chr 8:108,626,821...108,641,169
|
|
G
|
Cd44
|
CD44 molecule
|
involved_in
|
EXP IMP IDA
|
PMID:27798233
|
SynGO |
PMID:27798233 PMID:27798233 PMID:27798233 |
RGD:405650378, RGD:405650378, RGD:405650378 |
NCBI chr 3:109,610,824...109,699,776
Ensembl chr 3:89,157,058...89,244,620
|
|
G
|
Cdc42
|
cell division cycle 42
|
involved_in
|
IMP IDA
|
PMID:21423166
|
SynGO |
PMID:21423166 PMID:21423166 |
RGD:5688281, RGD:5688281 |
NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111
|
|
G
|
Chmp2b
|
charged multivesicular body protein 2B
|
involved_in
|
IMP IDA
|
PMID:25698751
|
SynGO |
PMID:25698751 PMID:25698751 |
RGD:13702150, RGD:13702150 |
NCBI chr11:16,783,971...16,810,500
Ensembl chr11:3,337,494...3,385,181
|
|
G
|
Egln1
|
egl-9 family hypoxia-inducible factor 1
|
involved_in
|
ISO
|
(PMID:26972007)
|
RGD |
PMID:26972007 |
|
NCBI chr19:69,765,276...69,804,681
Ensembl chr19:52,869,486...52,907,777
|
|
G
|
Gsk3b
|
glycogen synthase kinase 3 beta
|
involved_in
|
IMP IDA
|
PMID:23864697
|
SynGO |
PMID:23864697 PMID:23864697 |
RGD:13702314, RGD:13702314 |
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
|
|
G
|
Mrtfa
|
myocardin related transcription factor A
|
involved_in
|
IMP IDA
|
PMID:29335431
|
SynGO |
PMID:29335431 PMID:29335431 |
RGD:405650348, RGD:405650348 |
NCBI chr 7:112,544,305...112,714,418
Ensembl chr 7:112,544,312...112,714,418
|
|
G
|
Mrtfb
|
myocardin related transcription factor B
|
involved_in
|
IMP IDA
|
PMID:29335431
|
SynGO |
PMID:29335431 PMID:29335431 |
RGD:405650348, RGD:405650348 |
NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897
|
|
G
|
Myo5b
|
myosin Vb
|
involved_in
|
IDA IMP
|
PMID:18984164
|
SynGO |
PMID:18984164 PMID:18984164 |
RGD:11533643, RGD:11533643 |
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
|
|
G
|
Nf1
|
neurofibromin 1
|
involved_in
|
IDA EXP IMP
|
PMID:24431436
|
SynGO |
PMID:24431436 PMID:24431436 PMID:24431436 |
RGD:155230796, RGD:155230796, RGD:155230796 |
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
|
|
G
|
Pdxp
|
pyridoxal phosphatase
|
involved_in
|
ISO IEA
|
(PMID:27212638) GO_REF:0000107
|
RGD Ensembl |
PMID:27212638 |
GO_REF:0000107 |
NCBI chr 7:112,352,971...112,358,419
Ensembl chr 7:110,472,515...110,477,963
|
|
G
|
Phactr1
|
phosphatase and actin regulator 1
|
involved_in
|
IMP IDA
|
PMID:32975518
|
SynGO |
PMID:32975518 PMID:32975518 |
RGD:405650326, RGD:405650326 |
NCBI chr17:21,560,364...22,040,166
Ensembl chr17:21,562,721...22,039,831
|
|
G
|
Rapgef2
|
Rap guanine nucleotide exchange factor 2
|
involved_in
|
ISO
|
(PMID:26490870)
|
RGD |
PMID:26490870 |
|
NCBI chr 2:166,505,868...166,728,139
Ensembl chr 2:164,207,513...164,244,247
|
|
G
|
Rhoa
|
ras homolog family member A
|
involved_in
|
ISO IEA
|
(PMID:21423166) GO_REF:0000107
|
RGD Ensembl |
PMID:21423166 |
GO_REF:0000107 |
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
|
|
G
|
Rhob
|
ras homolog family member B
|
involved_in
|
ISO IEA
|
(PMID:20203211) GO_REF:0000107
|
RGD Ensembl |
PMID:20203211 |
GO_REF:0000107 |
NCBI chr 6:31,363,752...31,365,926
Ensembl chr 6:31,363,548...31,366,108
|
|
G
|
Strn
|
striatin
|
involved_in
|
IMP IDA
|
PMID:29802198
|
SynGO |
PMID:29802198 PMID:29802198 |
RGD:405650211, RGD:405650211 |
NCBI chr 6:16,335,265...16,422,159
Ensembl chr 6:16,335,358...16,417,083
|
|
G
|
Strn4
|
striatin 4
|
involved_in
|
IDA IMP
|
PMID:28442576
|
SynGO |
PMID:28442576 PMID:28442576 |
RGD:405650263, RGD:405650263 |
NCBI chr 1:86,614,193...86,639,959
Ensembl chr 1:77,482,094...77,511,858
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Kif5b
|
kinesin family member 5B
|
involved_in
|
ISO IEA
|
(PMID:31961321) GO_REF:0000107
|
RGD Ensembl |
PMID:31961321 |
GO_REF:0000107 |
NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508
|
|
G
|
Zdhhc17
|
zinc finger DHHC-type palmitoyltransferase 17
|
involved_in
|
ISO IEA
|
(PMID:24277827) GO_REF:0000107
|
RGD Ensembl |
PMID:24277827 |
GO_REF:0000107 |
NCBI chr 7:46,369,963...46,433,691
Ensembl chr 7:46,369,988...46,433,764
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Abl1
|
ABL proto-oncogene 1, non-receptor tyrosine kinase
|
involved_in
|
IGI IEA ISO
|
PMID:24658113 GO_REF:0000107 ComplexPortal:CPX-1134|UniProtKB:Q03137 (PMID:24658113)
|
Ensembl RGD |
PMID:24658113 PMID:24658113 |
GO_REF:0000107, RGD:12911004 |
NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065
|
|
G
|
Cln3
|
CLN3 lysosomal/endosomal transmembrane protein, battenin
|
involved_in
|
ISO IEA
|
(PMID:29780879) GO_REF:0000107
|
RGD Ensembl |
PMID:29780879 |
GO_REF:0000107 |
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
|
|
G
|
Epha4
|
Eph receptor A4
|
involved_in
|
IGI IEA ISO
|
PMID:24658113 GO_REF:0000107 ComplexPortal:CPX-1134|UniProtKB:P00520 (PMID:24658113)
|
Ensembl RGD |
PMID:24658113 PMID:24658113 |
GO_REF:0000107, RGD:12911004 |
NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Afdn
|
afadin, adherens junction formation factor
|
involved_in
|
ISO
|
(PMID:29969655)
|
RGD |
PMID:29969655 |
|
NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:53,905,373...54,034,216
|
|
G
|
Arhgap12
|
Rho GTPase activating protein 12
|
involved_in
|
IDA IMP
|
PMID:26854232
|
SynGO |
PMID:26854232 PMID:26854232 |
RGD:11572714, RGD:11572714 |
NCBI chr17:51,588,810...51,702,417
Ensembl chr17:51,588,842...51,702,080
|
|
G
|
Arhgap33
|
Rho GTPase activating protein 33
|
involved_in
|
ISO IEA
|
(PMID:24003235) GO_REF:0000107
|
RGD Ensembl |
PMID:24003235 |
GO_REF:0000107 |
NCBI chr 1:85,776,112...85,789,767
Ensembl chr 1:85,776,108...85,789,678
|
|
G
|
Arhgef15
|
Rho guanine nucleotide exchange factor 15
|
involved_in
|
ISO IEA
|
(PMID:28185854) GO_REF:0000107
|
RGD Ensembl |
PMID:28185854 |
GO_REF:0000107 |
NCBI chr10:53,650,521...53,663,269
Ensembl chr10:53,650,553...53,663,913
|
|
G
|
Asic1
|
acid sensing ion channel subunit 1
|
involved_in
|
ISO
|
(PMID:17060608)
|
RGD |
PMID:17060608 |
|
NCBI chr 7:130,798,317...130,828,535
Ensembl chr 7:130,799,917...130,828,541
|
|
G
|
Asic2
|
acid sensing ion channel subunit 2
|
involved_in
|
ISO
|
(PMID:19571134)
|
RGD |
PMID:19571134 |
|
NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
|
|
G
|
Carmil3
|
capping protein regulator and myosin 1 linker 3
|
involved_in
|
ISO IEA
|
(PMID:30674877) GO_REF:0000107
|
RGD Ensembl |
PMID:30674877 |
GO_REF:0000107 |
NCBI chr15:28,978,440...28,995,865
Ensembl chr15:28,979,007...28,996,225
|
|
G
|
Cc2d1a
|
coiled-coil and C2 domain containing 1A
|
involved_in
|
ISO IEA
|
(PMID:26826102) GO_REF:0000107
|
RGD Ensembl |
PMID:26826102 |
GO_REF:0000107 |
NCBI chr19:24,011,897...24,026,937
Ensembl chr19:24,011,938...24,026,936
|
|
G
|
Cpeb3
|
cytoplasmic polyadenylation element binding protein 3
|
involved_in
|
ISO
|
(PMID:22153079)
|
RGD |
PMID:22153079 |
|
NCBI chr 1:244,161,690...244,343,765
Ensembl chr 1:234,751,733...234,931,560
|
|
G
|
Crmp1
|
collapsin response mediator protein 1
|
involved_in
|
ISO IEA
|
(PMID:18003833) GO_REF:0000107
|
RGD Ensembl |
PMID:18003833 |
GO_REF:0000107 |
NCBI chr14:73,509,933...73,556,192
Ensembl chr14:73,509,933...73,556,177
|
|
G
|
Cyfip2
|
cytoplasmic FMR1 interacting protein 2
|
involved_in
|
ISO
|
(PMID:28692454)
|
RGD |
PMID:28692454 |
|
NCBI chr10:30,621,318...30,741,113
Ensembl chr10:30,621,318...30,741,113
|
|
G
|
Dclk1
|
doublecortin-like kinase 1
|
involved_in
|
ISO
|
(PMID:23385585)
|
RGD |
PMID:23385585 |
|
NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
|
|
G
|
Dcx
|
doublecortin
|
involved_in
|
ISO IEA
|
(PMID:29788228) GO_REF:0000107
|
RGD Ensembl |
PMID:29788228 |
GO_REF:0000107 |
NCBI chr X:112,227,455...112,370,291
Ensembl chr X:107,430,767...107,507,476
|
|
G
|
Dock1
|
dedicator of cyto-kinesis 1
|
involved_in
|
ISO
|
(PMID:21900250)
|
RGD |
PMID:21900250 |
|
NCBI chr 1:189,467,143...189,983,777
Ensembl chr 1:189,467,143...189,983,768
|
|
G
|
Dock10
|
dedicator of cytokinesis 10
|
involved_in
|
ISO
|
(PMID:25851601)
|
RGD |
PMID:25851601 |
|
NCBI chr 9:89,291,936...89,549,871
Ensembl chr 9:81,843,604...82,101,525
|
|
G
|
Dock4
|
dedicator of cytokinesis 4
|
involved_in
|
IMP IDA
|
PMID:23536706
|
SynGO |
PMID:23536706 PMID:23536706 |
RGD:405650262, RGD:405650262 |
NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855
|
|
G
|
Dpysl2
|
dihydropyrimidinase-like 2
|
involved_in
|
IDA IMP
|
PMID:29425794
|
SynGO |
PMID:29425794 PMID:29425794 |
RGD:405650303, RGD:405650303 |
NCBI chr15:45,181,041...45,287,065
Ensembl chr15:41,005,551...41,111,829
|
|
G
|
Elmo1
|
engulfment and cell motility 1
|
involved_in
|
IMP IDA
|
PMID:21900250
|
SynGO |
PMID:21900250 PMID:21900250 |
RGD:405650271, RGD:405650271 |
NCBI chr17:44,286,495...44,822,668
Ensembl chr17:44,286,485...44,822,788
|
|
G
|
Fam107a
|
family with sequence similarity 107, member A
|
involved_in
|
ISO
|
(PMID:21969592)
|
RGD |
PMID:21969592 |
|
NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
|
|
G
|
Flrt2
|
fibronectin leucine rich transmembrane protein 2
|
involved_in
|
IDA IMP
|
PMID:29983322
|
SynGO |
PMID:29983322 PMID:29983322 |
RGD:405650287, RGD:405650287 |
NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
|
|
G
|
Gna13
|
G protein subunit alpha 13
|
involved_in
|
ISO
|
(PMID:34665640)
|
RGD |
PMID:34665640 |
|
NCBI chr10:94,337,939...94,370,774
Ensembl chr10:94,337,725...94,370,774
|
|
G
|
Htr4
|
5-hydroxytryptamine receptor 4
|
involved_in
|
ISO IEA
|
(PMID:32060357) GO_REF:0000107
|
RGD Ensembl |
PMID:32060357 |
GO_REF:0000107 |
NCBI chr18:55,765,981...55,949,921
Ensembl chr18:55,766,725...55,949,321
|
|
G
|
Iqgap1
|
IQ motif containing GTPase activating protein 1
|
involved_in
|
IMP IDA
|
PMID:23441206
|
SynGO |
PMID:23441206 PMID:23441206 |
RGD:11530033, RGD:11530033 |
NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
|
|
G
|
Lrp4
|
LDL receptor related protein 4
|
involved_in
|
ISO IEA
|
(PMID:25407677) GO_REF:0000107
|
RGD Ensembl |
PMID:25407677 |
GO_REF:0000107 |
NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
|
|
G
|
Lzts1
|
leucine zipper tumor suppressor 1
|
involved_in
|
ISO IEA
|
(PMID:26490870) GO_REF:0000107
|
RGD Ensembl |
PMID:26490870 |
GO_REF:0000107 |
NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203
|
|
G
|
Lzts3
|
leucine zipper tumor suppressor family member 3
|
involved_in
|
IDA IMP
|
PMID:27252646
|
SynGO |
PMID:27252646 PMID:27252646 |
RGD:13210540, RGD:13210540 |
NCBI chr 3:138,303,378...138,313,645
Ensembl chr 3:117,851,702...117,860,081
|
|
G
|
Map1b
|
microtubule-associated protein 1B
|
involved_in
|
ISO IEA
|
(PMID:21984824) GO_REF:0000107
|
RGD Ensembl |
PMID:21984824 |
GO_REF:0000107 |
NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:30,817,261...30,910,317
|
|
G
|
Mark1
|
microtubule affinity regulating kinase 1
|
involved_in
|
ISO IEA
|
(PMID:27829159) GO_REF:0000107
|
RGD Ensembl |
PMID:27829159 |
GO_REF:0000107 |
NCBI chr13:96,450,189...96,555,304
Ensembl chr13:96,451,487...96,555,173
|
|
G
|
Nae1
|
NEDD8 activating enzyme E1 subunit 1
|
involved_in
|
ISO IEA
|
(PMID:25581363) GO_REF:0000107
|
RGD Ensembl |
PMID:25581363 |
GO_REF:0000107 |
NCBI chr19:446,015...472,145
Ensembl chr19:446,000...472,371
|
|
G
|
Nckipsd
|
NCK interacting protein with SH3 domain
|
involved_in
|
IDA IMP
|
PMID:23342115
|
SynGO |
PMID:23342115 PMID:23342115 |
RGD:405650384, RGD:405650384 |
NCBI chr 8:109,511,484...109,522,622
Ensembl chr 8:109,511,658...109,522,246
|
|
G
|
Nectin3
|
nectin cell adhesion molecule 3
|
involved_in
|
ISO IEA
|
(PMID:28872640) GO_REF:0000107
|
RGD Ensembl |
PMID:28872640 |
GO_REF:0000107 |
NCBI chr11:67,825,296...67,931,999
Ensembl chr11:54,364,487...54,462,519
|
|
G
|
Nedd8
|
NEDD8 ubiquitin like modifier
|
involved_in
|
ISO IEA
|
(PMID:25581363) GO_REF:0000107
|
RGD Ensembl |
PMID:25581363 |
GO_REF:0000107 |
NCBI chr15:29,153,556...29,165,575
Ensembl chr15:29,153,556...29,166,160
|
|
G
|
Neurl1
|
neuralized E3 ubiquitin protein ligase 1
|
involved_in
|
ISO IEA
|
(PMID:22153079) GO_REF:0000107
|
RGD Ensembl |
PMID:22153079 |
GO_REF:0000107 |
NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903
|
|
G
|
Nrxn2
|
neurexin 2
|
involved_in
|
ISO
|
(PMID:36608123)
|
RGD |
PMID:36608123 |
|
NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:203,735,753...203,842,297
|
|
G
|
Numb
|
NUMB, endocytic adaptor protein
|
involved_in
|
IDA IMP
|
PMID:16394100
|
SynGO |
PMID:16394100 PMID:16394100 |
RGD:2302413, RGD:2302413 |
NCBI chr 6:109,162,499...109,284,527
Ensembl chr 6:103,431,400...103,553,354
|
|
G
|
Numbl
|
NUMB-like, endocytic adaptor protein
|
involved_in
|
IDA IMP
|
PMID:16394100
|
SynGO |
PMID:16394100 PMID:16394100 |
RGD:2302413, RGD:2302413 |
NCBI chr 1:91,677,437...91,701,415
Ensembl chr 1:82,550,054...82,573,776
|
|
G
|
Palm
|
paralemmin
|
involved_in
|
IMP IDA
|
PMID:18287537
|
SynGO |
PMID:18287537 PMID:18287537 |
RGD:8553517, RGD:8553517 |
NCBI chr 7:10,537,252...10,563,346
Ensembl chr 7:9,886,643...9,912,555
|
|
G
|
Pcdh7
|
protocadherin 7
|
involved_in
|
IDA IMP
|
PMID:32616769
|
SynGO |
PMID:32616769 PMID:32616769 |
RGD:405650241, RGD:405650241 |
NCBI chr14:52,471,801...52,901,696
Ensembl chr14:52,475,610...52,902,051 Ensembl chr14:52,475,610...52,902,051
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|
G
|
Pdlim5
|
PDZ and LIM domain 5
|
involved_in
|
IDA IMP
|
PMID:19900557
|
SynGO |
PMID:19900557 PMID:19900557 |
RGD:8554803, RGD:8554803 |
NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
|
|
G
|
Ppp1r9b
|
protein phosphatase 1, regulatory subunit 9B
|
involved_in
|
ISO IEA
|
(PMID:10922077) GO_REF:0000107
|
RGD Ensembl |
PMID:10922077 |
GO_REF:0000107 |
NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
|
|
G
|
Psd
|
pleckstrin and Sec7 domain containing
|
involved_in
|
IMP IDA
|
PMID:16672654
|
SynGO |
PMID:16672654 PMID:16672654 |
RGD:8554141, RGD:8554141 |
NCBI chr 1:245,173,279...245,188,681
Ensembl chr 1:245,173,279...245,189,356
|
|
G
|
Ptpn1
|
protein tyrosine phosphatase, non-receptor type 1
|
involved_in
|
IMP IDA
|
PMID:22844492
|
SynGO |
PMID:22844492 PMID:22844492 |
RGD:405650356, RGD:405650356 |
NCBI chr 3:177,056,588...177,106,424
Ensembl chr 3:156,638,769...156,687,504
|
|
G
|
Pum2
|
pumilio RNA-binding family member 2
|
involved_in
|
IMP IDA
|
PMID:20133610
|
SynGO |
PMID:20133610 PMID:20133610 |
RGD:405650299, RGD:405650299 |
NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
|
|
G
|
Rac1
|
Rac family small GTPase 1
|
involved_in
|
ISO
|
(PMID:31369617)
|
RGD |
PMID:31369617 |
|
NCBI chr12:16,150,411...16,170,864
Ensembl chr12:11,036,698...11,057,251
|
|
G
|
Rac3
|
Rac family small GTPase 3
|
involved_in
|
ISO IEA
|
(PMID:31369617) GO_REF:0000107
|
RGD Ensembl |
PMID:31369617 |
GO_REF:0000107 |
NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260
|
|
G
|
Rhog
|
ras homolog family member G
|
involved_in
|
ISO
|
(PMID:21900250)
|
RGD |
PMID:21900250 |
|
NCBI chr 1:156,618,713...156,630,710
Ensembl chr 1:156,615,349...156,631,257
|
|
G
|
Rtn4
|
reticulon 4
|
involved_in
|
ISO IEA
|
(PMID:26748478) GO_REF:0000107
|
RGD Ensembl |
PMID:26748478 |
GO_REF:0000107 |
NCBI chr14:107,651,001...107,698,610
Ensembl chr14:103,449,930...103,497,686
|
|
G
|
Rtn4r
|
reticulon 4 receptor
|
involved_in
|
ISO
|
(PMID:26748478)
|
RGD |
PMID:26748478 |
|
NCBI chr11:96,348,613...96,373,554
Ensembl chr11:82,844,309...82,869,466
|
|
G
|
S1pr2
|
sphingosine-1-phosphate receptor 2
|
involved_in
|
ISO
|
(PMID:26748478)
|
RGD |
PMID:26748478 |
|
NCBI chr 8:19,503,276...19,514,169
Ensembl chr 8:19,502,627...19,523,574
|
|
G
|
Samd4a
|
sterile alpha motif domain containing 4A
|
involved_in
|
IDA IEP
|
PMID:22201125
|
SynGO |
PMID:22201125 PMID:22201125 |
RGD:405650281, RGD:405650281 |
NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380
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|
G
|
Sema4c
|
semaphorin 4C
|
involved_in
|
ISO IEA
|
(PMID:31444474) GO_REF:0000107
|
RGD Ensembl |
PMID:31444474 |
GO_REF:0000107 |
NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
|
|
G
|
Senp1
|
SUMO specific peptidase 1
|
involved_in
|
IDA IMP
|
PMID:29425794
|
SynGO |
PMID:29425794 PMID:29425794 |
RGD:405650303, RGD:405650303 |
NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598
|
|
G
|
Sigmar1
|
sigma non-opioid intracellular receptor 1
|
involved_in
|
IDA IMP
|
PMID:20018732
|
SynGO |
PMID:20018732 PMID:20018732 |
RGD:405650297, RGD:405650297 |
NCBI chr 5:61,700,021...61,702,799
Ensembl chr 5:56,904,159...56,907,017
|
|
G
|
Slc12a5
|
solute carrier family 12 member 5
|
involved_in
|
IMP IDA
|
PMID:18093524
|
SynGO |
PMID:18093524 PMID:18093524 |
RGD:405650301, RGD:405650301 |
NCBI chr 3:153,696,517...153,735,801
Ensembl chr 3:153,696,517...153,735,765
|
|
G
|
Srgap3
|
SLIT-ROBO Rho GTPase activating protein 3
|
involved_in
|
ISO
|
(PMID:21325512)
|
RGD |
PMID:21325512 |
|
NCBI chr 4:145,839,369...146,070,556
Ensembl chr 4:145,840,078...146,070,575
|
|
G
|
Syndig1
|
synapse differentiation inducing 1
|
involved_in
|
IDA IMP EXP
|
PMID:20152115
|
SynGO |
PMID:20152115 PMID:20152115 PMID:20152115 |
RGD:8554654, RGD:8554654, RGD:8554654 |
NCBI chr 3:138,030,995...138,234,646
Ensembl chr 3:138,031,769...138,198,122
|
|
G
|
Trim47
|
tripartite motif-containing 47
|
involved_in
|
IDA IMP
|
PMID:36211980
|
SynGO |
PMID:36211980 PMID:36211980 |
RGD:405650257, RGD:405650257 |
NCBI chr10:101,337,573...101,342,044
Ensembl chr10:101,337,573...101,342,044
|
|
G
|
Ube2m
|
ubiquitin-conjugating enzyme E2M
|
involved_in
|
ISO
|
(PMID:25581363)
|
RGD |
PMID:25581363 |
|
NCBI chr 1:73,662,576...73,666,113
Ensembl chr 1:73,662,576...73,666,026
|
|
G
|
Ube3b
|
ubiquitin protein ligase E3B
|
involved_in
|
ISO IEA
|
(PMID:32249816) GO_REF:0000107
|
RGD Ensembl |
PMID:32249816 |
GO_REF:0000107 |
NCBI chr12:42,183,756...42,230,094
Ensembl chr12:42,183,760...42,230,094
|
|
G
|
Usp9x
|
ubiquitin specific peptidase 9, X-linked
|
involved_in
|
ISO
|
(PMID:31813652)
|
RGD |
PMID:31813652 |
|
NCBI chr X:9,588,825...9,726,993
Ensembl chr X:9,588,825...9,696,711
|
|
G
|
Vps35
|
VPS35 retromer complex component
|
involved_in
|
ISO IEA
|
(PMID:26521016) GO_REF:0000107
|
RGD Ensembl |
PMID:26521016 |
GO_REF:0000107 |
NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
|
|
G
|
Zdhhc8
|
zinc finger DHHC-type palmitoyltransferase 8
|
involved_in
|
ISO
|
(PMID:18836441)
|
RGD |
PMID:18836441 |
|
NCBI chr11:82,755,110...82,769,280
Ensembl chr11:82,755,143...82,767,734
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Abhd17a
|
abhydrolase domain containing 17A, depalmitoylase
|
involved_in
|
IDA IBA IEP IMP
|
PMID:27307232 GO_REF:0000033
|
GO_Central |
PMID:27307232 PMID:27307232 PMID:27307232 |
GO_REF:0000033, RGD:13441201, RGD:13441201, RGD:13441201 |
NCBI chr 7:9,124,332...9,132,762
Ensembl chr 7:9,124,332...9,130,762
|
|
G
|
Abhd17b
|
abhydrolase domain containing 17B, depalmitoylase
|
involved_in
|
IDA IBA IEP IMP
|
PMID:27307232 GO_REF:0000033
|
GO_Central |
PMID:27307232 PMID:27307232 PMID:27307232 |
GO_REF:0000033, RGD:13441201, RGD:13441201, RGD:13441201 |
NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933
|
|
G
|
Abhd17c
|
abhydrolase domain containing 17C, depalmitoylase
|
involved_in
|
IMP IBA IEP IDA
|
PMID:27307232 GO_REF:0000033
|
GO_Central |
PMID:27307232 PMID:27307232 PMID:27307232 |
GO_REF:0000033, RGD:13441201, RGD:13441201, RGD:13441201 |
NCBI chr 1:138,084,632...138,125,595
Ensembl chr 1:138,084,634...138,125,595
|
|
G
|
Adam10
|
ADAM metallopeptidase domain 10
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:23083742)
|
Ensembl RGD |
PMID:23083742 |
GO_REF:0000107 |
NCBI chr 8:80,226,862...80,358,728
Ensembl chr 8:71,345,837...71,477,889
|
|
G
|
Akt1
|
AKT serine/threonine kinase 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:26844834)
|
Ensembl RGD |
PMID:26844834 |
GO_REF:0000107 |
NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921
|
|
G
|
Arf4
|
ARF GTPase 4
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:23050017)
|
Ensembl RGD |
PMID:23050017 |
GO_REF:0000107 |
NCBI chr16:1,903,238...1,920,012
Ensembl chr16:1,896,546...1,913,261
|
|
G
|
Arhgap22
|
Rho GTPase activating protein 22
|
involved_in
|
ISO IEA IBA
|
(PMID:21926414) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:21926414 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr16:8,473,806...8,631,552
Ensembl chr16:8,476,306...8,631,548
|
|
G
|
Asap1
|
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
|
involved_in
|
ISO
|
(PMID:23050017)
|
RGD |
PMID:23050017 |
|
NCBI chr 7:97,675,354...97,982,523
Ensembl chr 7:95,787,818...96,092,754
|
|
G
|
Baiap2
|
BAR/IMD domain containing adaptor protein 2
|
involved_in
|
IDA IMP
|
PMID:15673667
|
SynGO |
PMID:15673667 PMID:15673667 |
RGD:9684988, RGD:9684988 |
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
|
|
G
|
Cdc42
|
cell division cycle 42
|
involved_in
|
ISO
|
(PMID:25851601)
|
RGD |
PMID:25851601 |
|
NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111
|
|
G
|
Cdkl5
|
cyclin-dependent kinase-like 5
|
involved_in
|
ISO
|
(PMID:22922712)
|
RGD |
PMID:22922712 |
|
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
|
|
G
|
Chmp2b
|
charged multivesicular body protein 2B
|
involved_in
|
IMP IDA
|
PMID:25698751
|
SynGO |
PMID:25698751 PMID:25698751 |
RGD:13702150, RGD:13702150 |
NCBI chr11:16,783,971...16,810,500
Ensembl chr11:3,337,494...3,385,181
|
|
G
|
Chmp4bl1
|
chromatin modifying protein 4B-like 1
|
involved_in
|
IDA IMP
|
PMID:25698751
|
SynGO |
PMID:25698751 PMID:25698751 |
RGD:13702150, RGD:13702150 |
NCBI chr 4:68,049,742...68,050,791
Ensembl chr 4:68,049,705...68,050,676
|
|
G
|
Dact1
|
dishevelled-binding antagonist of beta-catenin 1
|
involved_in
|
ISO
|
(PMID:20335472), (PMID:23826333)
|
RGD |
PMID:20335472 PMID:23826333 |
|
NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906
|
|
G
|
Dgkb
|
diacylglycerol kinase, beta
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:20657643)
|
Ensembl RGD |
PMID:20657643 |
GO_REF:0000107 |
NCBI chr 6:60,368,101...61,124,420
Ensembl chr 6:54,641,614...55,397,043
|
|
G
|
Disc1
|
DISC1 scaffold protein
|
involved_in
|
ISO IEA
|
(PMID:23826333) GO_REF:0000107
|
RGD Ensembl |
PMID:23826333 |
GO_REF:0000107 |
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
|
|
G
|
Dvl1
|
dishevelled segment polarity protein 1
|
involved_in
|
ISO IEA
|
(PMID:23826333) GO_REF:0000107
|
RGD Ensembl |
PMID:23826333 |
GO_REF:0000107 |
NCBI chr 5:171,738,911...171,750,967
Ensembl chr 5:166,456,686...166,468,664
|
|
G
|
Epha7
|
Eph receptor A7
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:24707048)
|
Ensembl RGD |
PMID:24707048 |
GO_REF:0000107 |
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
|
|
G
|
Ghrl
|
ghrelin and obestatin prepropeptide
|
involved_in
|
IMP IDA
|
PMID:22516464
|
SynGO |
PMID:22516464 PMID:22516464 |
RGD:13702295, RGD:13702295 |
NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621
|
|
G
|
Ghsr
|
growth hormone secretagogue receptor
|
involved_in
|
IDA EXP
|
PMID:22516464
|
SynGO |
PMID:22516464 PMID:22516464 |
RGD:13702295, RGD:13702295 |
NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865
|
|
G
|
Grid1
|
glutamate ionotropic receptor delta type subunit 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:25721396)
|
Ensembl RGD |
PMID:25721396 |
GO_REF:0000107 |
NCBI chr16:10,138,564...10,885,803
Ensembl chr16:10,138,925...10,885,808
|
|
G
|
Haus8l2
|
HAUS augmin-like complex, subunit 8 like 2
|
involved_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
|
|
G
|
Hnrnpk
|
heterogeneous nuclear ribonucleoprotein K
|
involved_in
|
IDA IMP
|
PMID:24990929
|
SynGO |
PMID:24990929 PMID:24990929 |
RGD:10002784, RGD:10002784 |
NCBI chr17:6,269,302...6,280,429
Ensembl chr17:6,262,998...6,274,997
|
|
G
|
Hnrnpm
|
heterogeneous nuclear ribonucleoprotein M
|
involved_in
|
IDA IMP
|
PMID:22238095
|
SynGO |
PMID:22238095 PMID:22238095 |
RGD:155230714, RGD:155230714 |
NCBI chr 7:15,140,877...15,178,871
Ensembl chr 7:14,438,688...14,476,762
|
|
G
|
Hspa8
|
heat shock protein family A (Hsp70) member 8
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:28234934)
|
Ensembl RGD |
PMID:28234934 |
GO_REF:0000107 |
NCBI chr 8:50,080,514...50,084,376
Ensembl chr 8:41,183,264...41,187,259
|
|
G
|
Il1rapl1
|
interleukin 1 receptor accessory protein-like 1
|
involved_in
|
ISO IEA
|
(PMID:21926414) GO_REF:0000107
|
RGD Ensembl |
PMID:21926414 |
GO_REF:0000107 |
NCBI chr X:51,371,969...52,876,726
Ensembl chr X:51,378,215...52,876,772
|
|
G
|
Itsn1
|
intersectin 1
|
involved_in
|
IDA IMP
|
PMID:19258322
|
SynGO |
PMID:19258322 PMID:19258322 |
RGD:13461864, RGD:13461864 |
NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
|
|
G
|
Lrfn2
|
leucine rich repeat and fibronectin type III domain containing 2
|
involved_in
|
ISO
|
(PMID:28604739)
|
RGD |
PMID:28604739 |
|
NCBI chr 9:11,897,425...12,066,177
Ensembl chr 9:11,897,468...11,939,931
|
|
G
|
Mark2
|
microtubule affinity regulating kinase 2
|
involved_in
|
IDA IMP
|
PMID:22807451
|
SynGO |
PMID:22807451 PMID:22807451 |
RGD:155230723, RGD:155230723 |
NCBI chr 1:204,461,029...204,526,247
Ensembl chr 1:204,461,030...204,525,652
|
|
G
|
Mink1
|
misshapen-like kinase 1
|
involved_in
|
IEP IMP IDA
|
PMID:21048137
|
SynGO |
PMID:21048137 PMID:21048137 PMID:21048137 |
RGD:8553980, RGD:8553980, RGD:8553980 |
NCBI chr10:55,776,879...55,829,406
Ensembl chr10:55,278,391...55,330,782
|
|
G
|
Ncan
|
neurocan
|
involved_in
|
ISO
|
(PMID:30356641)
|
RGD |
PMID:30356641 |
|
NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
|
|
G
|
Nf1
|
neurofibromin 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:22105171)
|
Ensembl RGD |
PMID:22105171 |
GO_REF:0000107 |
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
|
|
G
|
Nrcam
|
neuronal cell adhesion molecule
|
involved_in
|
ISO
|
(PMID:25143608)
|
RGD |
PMID:25143608 |
|
NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
|
|
G
|
Nrp2
|
neuropilin 2
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:20010807)
|
Ensembl RGD |
PMID:20010807 |
GO_REF:0000107 |
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
|
|
G
|
Pafah1b1
|
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
|
involved_in
|
ISO IEA
|
(PMID:23483716) GO_REF:0000107
|
RGD Ensembl |
PMID:23483716 |
GO_REF:0000107 |
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
|
|
G
|
Pak3
|
p21 (RAC1) activated kinase 3
|
involved_in
|
ISO
|
(PMID:25851601)
|
RGD |
PMID:25851601 |
|
NCBI chr X:111,912,967...112,171,037
Ensembl chr X:107,260,898...107,368,314
|
|
G
|
Plppr4
|
phospholipid phosphatase related 4
|
involved_in
|
ISO IEA
|
(PMID:27453502) GO_REF:0000107
|
RGD Ensembl |
PMID:27453502 |
GO_REF:0000107 |
NCBI chr 2:205,371,317...205,412,302
Ensembl chr 2:205,371,322...205,412,302
|
|
G
|
Psen1
|
presenilin 1
|
involved_in
|
ISO IEA
|
(PMID:23083742) GO_REF:0000107
|
RGD Ensembl |
PMID:23083742 |
GO_REF:0000107 |
NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650
|
|
G
|
Psen2
|
presenilin 2
|
involved_in
|
ISO
|
(PMID:23083742)
|
RGD |
PMID:23083742 |
|
NCBI chr13:94,499,451...94,528,419
Ensembl chr13:91,967,983...91,993,174
|
|
G
|
Ptprf
|
protein tyrosine phosphatase, receptor type, F
|
involved_in
|
IDA IMP
|
PMID:15750591
|
SynGO |
PMID:15750591 PMID:15750591 |
RGD:1642736, RGD:1642736 |
NCBI chr 5:137,027,376...137,109,405
Ensembl chr 5:131,742,754...131,810,023
|
|
G
|
Rapgef4
|
Rap guanine nucleotide exchange factor 4
|
involved_in
|
IDA IMP
|
PMID:19734897
|
SynGO |
PMID:19734897 PMID:19734897 |
RGD:2314692, RGD:2314692 |
NCBI chr 3:56,809,388...57,101,332
Ensembl chr 3:56,809,270...57,102,316
|
|
G
|
Rbmx
|
RNA binding motif protein, X-linked
|
involved_in
|
IDA IMP
|
PMID:22238095
|
SynGO |
PMID:22238095 PMID:22238095 |
RGD:155230714, RGD:155230714 |
NCBI chr X:135,305,237...135,314,806
Ensembl chr X:135,305,325...135,314,743
|
|
G
|
Rheb
|
Ras homolog, mTORC1 binding
|
involved_in
|
IDA IMP
|
PMID:24889507
|
SynGO |
PMID:24889507 PMID:24889507 |
RGD:13702223, RGD:13702223 |
NCBI chr 4:11,012,173...11,053,860
Ensembl chr 4:10,279,370...10,320,160
|
|
G
|
Ror2
|
receptor tyrosine kinase-like orphan receptor 2
|
involved_in
|
IDA IMP
|
PMID:26003414
|
SynGO |
PMID:26003414 PMID:26003414 |
RGD:11344299, RGD:11344299 |
NCBI chr17:12,124,749...12,300,044
Ensembl chr17:11,972,830...12,148,152
|
|
G
|
Rps6ka5
|
ribosomal protein S6 kinase A5
|
involved_in
|
ISO IEA
|
(PMID:23077336) GO_REF:0000107
|
RGD Ensembl |
PMID:23077336 |
GO_REF:0000107 |
NCBI chr 6:125,558,434...125,736,576
Ensembl chr 6:119,828,846...120,006,224
|
|
G
|
Sema3f
|
semaphorin 3F
|
involved_in
|
ISO IEA
|
(PMID:20010807), (PMID:25143608) GO_REF:0000107
|
RGD Ensembl |
PMID:20010807 PMID:25143608 |
GO_REF:0000107 |
NCBI chr 8:117,236,269...117,265,206
Ensembl chr 8:108,357,629...108,387,083
|
|
G
|
Shank2
|
SH3 and multiple ankyrin repeat domains 2
|
involved_in
|
IMP IDA
|
PMID:21217644
|
SynGO |
PMID:21217644 PMID:21217644 |
RGD:13702145, RGD:13702145 |
NCBI chr 1:208,575,144...209,020,300
Ensembl chr 1:199,169,429...199,589,394
|
|
G
|
Shank3
|
SH3 and multiple ankyrin repeat domains 3
|
involved_in
|
IMP IDA
|
PMID:21217644
|
SynGO |
PMID:21217644 PMID:21217644 |
RGD:13702145, RGD:13702145 |
NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:120,570,402...120,630,374
|
|
G
|
Tanc1
|
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
|
involved_in
|
IMP IBA IDA
|
PMID:21068316 GO_REF:0000033
|
GO_Central |
PMID:21068316 PMID:21068316 |
GO_REF:0000033, RGD:11353167, RGD:11353167 |
NCBI chr 3:44,099,387...44,335,478
Ensembl chr 3:44,134,016...44,331,627
|
|
G
|
Taok2
|
TAO kinase 2
|
involved_in
|
IMP IDA
|
PMID:28065648
|
SynGO |
PMID:28065648 PMID:28065648 |
RGD:155230793, RGD:155230793 |
NCBI chr 1:190,906,236...190,925,359
Ensembl chr 1:181,475,711...181,494,613
|
|
G
|
Tiam1
|
TIAM Rac1 associated GEF 1
|
involved_in
|
IMP IDA
|
PMID:15721239
|
SynGO |
PMID:15721239 PMID:15721239 |
RGD:12050147, RGD:12050147 |
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
|
|
G
|
Tsc2
|
TSC complex subunit 2
|
involved_in
|
IMP IDA
|
PMID:24889507
|
SynGO |
PMID:24889507 PMID:24889507 |
RGD:13702223, RGD:13702223 |
NCBI chr10:14,125,679...14,160,317
Ensembl chr10:13,621,136...13,655,951
|
|
G
|
Tsc2_v1
|
TSC complex subunit 2, variant 1
|
involved_in
|
IMP IDA
|
PMID:24889507
|
SynGO |
PMID:24889507 PMID:24889507 |
RGD:13702223, RGD:13702223 |
|
|
G
|
Tsc2_v2
|
TSC complex subunit 2, variant 2
|
involved_in
|
IMP IDA
|
PMID:24889507
|
SynGO |
PMID:24889507 PMID:24889507 |
RGD:13702223, RGD:13702223 |
|
|
G
|
Vhl
|
von Hippel-Lindau tumor suppressor
|
involved_in
|
ISO IEA
|
(PMID:26972007) GO_REF:0000107
|
RGD Ensembl |
PMID:26972007 |
GO_REF:0000107 |
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
|
|
G
|
Wasl
|
WASP like actin nucleation promoting factor
|
involved_in
|
ISO
|
(PMID:25851601)
|
RGD |
PMID:25851601 |
|
NCBI chr 4:54,049,081...54,097,653
Ensembl chr 4:53,083,536...53,132,022
|
|
G
|
Wnt5a
|
Wnt family member 5A
|
involved_in
|
ISO IEA
|
(PMID:27402827) GO_REF:0000107
|
RGD Ensembl |
PMID:27402827 |
GO_REF:0000107 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
|
|
G
|
Wnt7a
|
Wnt family member 7A
|
involved_in
|
ISO IEA
|
(PMID:21670302) GO_REF:0000107
|
RGD Ensembl |
PMID:21670302 |
GO_REF:0000107 |
NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Abi3bp
|
ABI family member 3 binding protein
|
involved_in
|
IMP
|
PMID:22485184
|
ARUK-UCL |
PMID:22485184 |
RGD:42721990 |
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
|
|
G
|
Caskin1
|
CASK interacting protein 1
|
involved_in
|
ISO IEA
|
(PMID:31727973) GO_REF:0000107
|
RGD Ensembl |
PMID:31727973 |
GO_REF:0000107 |
NCBI chr10:13,512,684...13,533,380
Ensembl chr10:13,513,465...13,533,377
|
|
G
|
Cbln1
|
cerebellin 1 precursor
|
involved_in
|
ISO IEA
|
(PMID:20395510) GO_REF:0000107
|
RGD Ensembl |
PMID:20395510 |
GO_REF:0000107 |
NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
|
|
G
|
Cript
|
CXXC repeat containing interactor of PDZ3 domain
|
involved_in
|
IMP IDA
|
PMID:10570482
|
SynGO |
PMID:10570482 PMID:10570482 |
RGD:8554363, RGD:8554363 |
NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399
|
|
G
|
Fgfr1
|
Fibroblast growth factor receptor 1
|
involved_in
|
ISO IEA
|
(PMID:32324534) GO_REF:0000107
|
RGD Ensembl |
PMID:32324534 |
GO_REF:0000107 |
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350
|
|
G
|
Grid2
|
glutamate ionotropic receptor delta type subunit 2
|
involved_in
|
ISO IEA
|
(PMID:20395510) GO_REF:0000107
|
RGD Ensembl |
PMID:20395510 |
GO_REF:0000107 |
NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
|
|
G
|
Il1rap
|
interleukin 1 receptor accessory protein
|
involved_in
|
ISO
|
(PMID:22357843)
|
RGD |
PMID:22357843 |
|
NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
|
|
G
|
Lats1
|
large tumor suppressor kinase 1
|
involved_in
|
IMP IDA EXP
|
PMID:29317530
|
SynGO |
PMID:29317530 PMID:29317530 PMID:29317530 |
RGD:405650325, RGD:405650325, RGD:405650325 |
NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640
|
|
G
|
Lrfn1
|
leucine rich repeat and fibronectin type III domain containing 1
|
involved_in
|
IMP IDA
|
PMID:16630835
|
SynGO |
PMID:16630835 PMID:16630835 |
RGD:13702351, RGD:13702351 |
NCBI chr 1:83,742,442...83,761,450
Ensembl chr 1:83,682,964...83,761,449
|
|
G
|
Lrfn4
|
leucine rich repeat and fibronectin type III domain containing 4
|
involved_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:20410109)
|
GO_Central Ensembl RGD |
PMID:20410109 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861
|
|
G
|
Lrrc4b
|
leucine rich repeat containing 4B
|
involved_in
|
IMP IBA IDA
|
PMID:19252495 GO_REF:0000033
|
GO_Central |
PMID:19252495 PMID:19252495 |
GO_REF:0000033, RGD:13702321, RGD:13702321 |
NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
|
|
G
|
Lrrtm1
|
leucine rich repeat transmembrane neuronal 1
|
involved_in
|
IMP IDA
|
PMID:19285470
|
SynGO |
PMID:19285470 PMID:19285470 |
RGD:8554788, RGD:8554788 |
NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
|
|
G
|
Lrrtm2
|
leucine rich repeat transmembrane neuronal 2
|
involved_in
|
IDA IMP
|
PMID:19285470
|
SynGO |
PMID:19285470 PMID:19285470 |
RGD:8554788, RGD:8554788 |
NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864
|
|
G
|
Nlgn1
|
neuroligin 1
|
involved_in
|
ISO
|
(PMID:32324534)
|
RGD |
PMID:32324534 |
|
NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464
|
|
G
|
Nrxn1
|
neurexin 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:21410790)
|
Ensembl RGD |
PMID:21410790 |
GO_REF:0000107 |
NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:3,177,897...4,322,710
|
|
G
|
Prickle1
|
prickle planar cell polarity protein 1
|
involved_in
|
ISO IEA
|
(PMID:34613779) GO_REF:0000107
|
RGD Ensembl |
PMID:34613779 |
GO_REF:0000107 |
NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113
|
|
G
|
Prickle2
|
prickle planar cell polarity protein 2
|
involved_in
|
ISO
|
(PMID:23711981), (PMID:34613779)
|
RGD |
PMID:23711981 PMID:34613779 |
|
NCBI chr 4:124,869,655...125,214,862
Ensembl chr 4:124,869,552...125,214,824
|
|
G
|
Ptk2b
|
protein tyrosine kinase 2 beta
|
involved_in
|
ISO
|
(PMID:28555636)
|
RGD |
PMID:28555636 |
|
NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282
|
|
G
|
Ptprd
|
protein tyrosine phosphatase, receptor type, D
|
involved_in
|
EXP ISO IDA
|
PMID:29024665 (PMID:22357843)
|
RGD |
PMID:22357843 PMID:29024665 PMID:29024665 |
RGD:13702141, RGD:13702141 |
NCBI chr 5:90,046,993...90,698,977 NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
|
|
G
|
Ptprs
|
protein tyrosine phosphatase, receptor type, S
|
involved_in
|
IDA ISO IMP EXP
|
PMID:21262467 (PMID:21262467)
|
RGD |
PMID:21262467 PMID:21262467 PMID:21262467 PMID:21262467 |
RGD:13702219, RGD:13702219, RGD:13702219 |
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
|
|
G
|
Sipa1l1
|
signal-induced proliferation-associated 1 like 1
|
involved_in
|
IMP IDA
|
PMID:11502259
|
SynGO |
PMID:11502259 PMID:11502259 |
RGD:8554032, RGD:8554032 |
NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Cdh2
|
cadherin 2
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:20534458)
|
Ensembl RGD |
PMID:20534458 |
GO_REF:0000107 |
NCBI chr18:8,051,097...8,265,288
Ensembl chr18:7,776,704...7,990,167
|
|
G
|
Cript
|
CXXC repeat containing interactor of PDZ3 domain
|
involved_in
|
IMP
|
PMID:10570482
|
UniProt |
PMID:10570482 |
RGD:8554363 |
NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399
|
|
G
|
Dbn1
|
drebrin 1
|
|
IMP
|
|
RGD |
PMID:12878700 |
RGD:10398728 |
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
|
|
G
|
Slc30a1
|
solute carrier family 30 member 1
|
|
IMP
|
|
RGD |
PMID:25319628 |
RGD:11057402 |
NCBI chr13:106,022,019...106,025,892
Ensembl chr13:103,491,037...103,494,910
|
|
G
|
Zmynd8
|
zinc finger, MYND-type containing 8
|
|
IMP
|
|
RGD |
PMID:24117785 |
RGD:8554267 |
NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
App
|
amyloid beta precursor protein
|
involved_in
|
ISO IEA
|
(PMID:19726636) GO_REF:0000107
|
RGD Ensembl |
PMID:19726636 |
GO_REF:0000107 |
NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561
|
|
G
|
Arf6
|
ARF GTPase 6
|
involved_in
|
IMP IDA
|
PMID:16672654
|
SynGO |
PMID:16672654 PMID:16672654 |
RGD:8554141, RGD:8554141 |
NCBI chr 6:93,589,777...93,590,925
Ensembl chr 6:87,840,142...87,874,114
|
|
G
|
Cbln1
|
cerebellin 1 precursor
|
involved_in
|
ISO IEA
|
(PMID:20395510), (PMID:21410790) GO_REF:0000107
|
RGD Ensembl |
PMID:20395510 PMID:21410790 |
GO_REF:0000107 |
NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572
|
|
G
|
Clstn3
|
calsyntenin 3
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:24613359)
|
Ensembl RGD |
PMID:24613359 |
GO_REF:0000107 |
NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:157,331,494...157,364,769
|
|
G
|
Eif4g1
|
eukaryotic translation initiation factor 4 gamma 1
|
involved_in
|
ISO
|
UniProtKB:Q21053 (PMID:25533483)
|
RGD |
PMID:25533483 |
|
NCBI chr11:93,726,322...93,746,387
Ensembl chr11:80,221,919...80,241,941
|
|
G
|
Farp1
|
FERM, ARH/RhoGEF and pleckstrin domain protein 1
|
involved_in
|
IMP IDA
|
PMID:23209303
|
SynGO |
PMID:23209303 PMID:23209303 |
RGD:8554251, RGD:8554251 |
NCBI chr15:98,124,304...98,363,299
Ensembl chr15:98,182,329...98,363,299
|
|
G
|
Fzd1
|
frizzled class receptor 1
|
involved_in
|
ISO
|
(PMID:19883499)
|
RGD |
PMID:19883499 |
|
NCBI chr 4:30,265,074...30,269,472
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
|
|
G
|
Gpc4
|
glypican 4
|
involved_in
|
IDA IBA IMP
|
PMID:23911103 GO_REF:0000033
|
GO_Central |
PMID:23911103 PMID:23911103 |
GO_REF:0000033, RGD:13702303, RGD:13702303 |
NCBI chr X:136,565,536...136,676,142
Ensembl chr X:131,644,704...131,755,284
|
|
G
|
Grid2
|
glutamate ionotropic receptor delta type subunit 2
|
involved_in
|
IDA IMP
|
PMID:21410790 PMID:20395510
|
SynGO |
PMID:21410790 PMID:21410790 PMID:20395510 PMID:20395510 |
RGD:13702257, RGD:13702257, RGD:13702347, RGD:13702347 |
NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
|
|
G
|
Igsf11
|
immunoglobulin superfamily, member 11
|
involved_in
|
ISO
|
(PMID:34261648)
|
RGD |
PMID:34261648 |
|
NCBI chr11:61,733,139...61,884,059
Ensembl chr11:61,733,144...61,868,348
|
|
G
|
Il1rap
|
interleukin 1 receptor accessory protein
|
involved_in
|
ISO
|
(PMID:22357843)
|
RGD |
PMID:22357843 |
|
NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
|
|
G
|
Il1rapl1
|
interleukin 1 receptor accessory protein-like 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:21926414)
|
Ensembl RGD |
PMID:21926414 |
GO_REF:0000107 |
NCBI chr X:51,371,969...52,876,726
Ensembl chr X:51,378,215...52,876,772
|
|
G
|
Il1rapl2
|
interleukin 1 receptor accessory protein-like 2
|
involved_in
|
ISO
|
(PMID:21926414)
|
RGD |
PMID:21926414 |
|
NCBI chr X:100,961,509...102,271,753
Ensembl chr X:100,961,812...102,271,753
|
|
G
|
Lrfn3
|
leucine rich repeat and fibronectin type III domain containing 3
|
involved_in
|
IMP IDA
|
PMID:27480238
|
SynGO |
PMID:27480238 PMID:27480238 |
RGD:13702184, RGD:13702184 |
NCBI chr 1:85,616,862...85,623,725
Ensembl chr 1:85,616,868...85,623,725
|
|
G
|
Lrfn4
|
leucine rich repeat and fibronectin type III domain containing 4
|
involved_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:20410109)
|
GO_Central Ensembl RGD |
PMID:20410109 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861
|
|
G
|
Lrfn5
|
leucine rich repeat and fibronectin type III domain containing 5
|
involved_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:20410109)
|
GO_Central Ensembl RGD |
PMID:20410109 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 6:79,466,403...79,822,821
Ensembl chr 6:79,467,961...79,822,815
|
|
G
|
Lrrc4b
|
leucine rich repeat containing 4B
|
involved_in
|
IDA IBA IMP
|
PMID:19252495 GO_REF:0000033
|
GO_Central |
PMID:19252495 PMID:19252495 |
GO_REF:0000033, RGD:13702321, RGD:13702321 |
NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
|
|
G
|
Lrrtm1
|
leucine rich repeat transmembrane neuronal 1
|
involved_in
|
IDA IMP
|
PMID:19285470
|
SynGO |
PMID:19285470 PMID:19285470 |
RGD:8554788, RGD:8554788 |
NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
|
|
G
|
Lrrtm3
|
leucine rich repeat transmembrane neuronal 3
|
involved_in
|
ISO
|
(PMID:26776509)
|
RGD |
PMID:26776509 |
|
NCBI chr20:24,515,627...24,689,669
Ensembl chr20:24,515,627...24,689,669
|
|
G
|
Mdga1
|
MAM domain containing glycosylphosphatidylinositol anchor 1
|
involved_in
|
ISO
|
(PMID:28641112)
|
RGD |
PMID:28641112 |
|
NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
|
|
G
|
Mdga2
|
MAM domain containing glycosylphosphatidylinositol anchor 2
|
involved_in
|
ISO
|
(PMID:27608760)
|
RGD |
PMID:27608760 |
|
NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126
|
|
G
|
Nlgn2
|
neuroligin 2
|
involved_in
|
IMP IDA
|
PMID:10892652
|
SynGO |
PMID:10892652 PMID:10892652 |
RGD:13702379, RGD:13702379 |
NCBI chr10:55,042,175...55,056,578
Ensembl chr10:54,544,588...54,558,434
|
|
G
|
Nrg1
|
neuregulin 1
|
involved_in
|
ISO
|
(PMID:20393464)
|
RGD |
PMID:20393464 |
|
NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
|
|
G
|
Nrxn1
|
neurexin 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:17360903)
|
Ensembl RGD |
PMID:17360903 |
GO_REF:0000107 |
NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:3,177,897...4,322,710
|
|
G
|
Ntng2
|
netrin G2
|
involved_in
|
ISO IEA
|
(PMID:16980967) GO_REF:0000107
|
RGD Ensembl |
PMID:16980967 |
GO_REF:0000107 |
NCBI chr 3:32,889,856...32,949,032
Ensembl chr 3:12,492,639...12,545,890
|
|
G
|
Ntrk3
|
neurotrophic receptor tyrosine kinase 3
|
involved_in
|
IDA IMP
|
PMID:21262467
|
SynGO |
PMID:21262467 PMID:21262467 |
RGD:13702219, RGD:13702219 |
NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:132,132,849...132,503,286
|
|
G
|
Slitrk1
|
SLIT and NTRK-like family, member 1
|
involved_in
|
ISO
|
(PMID:23345436)
|
RGD |
PMID:23345436 |
|
NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
|
|
G
|
Slitrk2
|
SLIT and NTRK-like family, member 2
|
involved_in
|
ISO IEA
|
(PMID:23345436) GO_REF:0000107
|
RGD Ensembl |
PMID:23345436 |
GO_REF:0000107 |
NCBI chr X:145,246,448...145,259,983
Ensembl chr X:145,246,460...145,271,220
|
|
G
|
Slitrk3
|
SLIT and NTRK-like family, member 3
|
involved_in
|
ISO
|
(PMID:23345436) (PMID:22286174)
|
RGD |
PMID:22286174 PMID:23345436 |
|
NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
|
|
G
|
Snca
|
synuclein alpha
|
involved_in
|
ISO IEA
|
UniProtKB:Q21053 (PMID:25533483) GO_REF:0000107
|
RGD Ensembl |
PMID:25533483 |
GO_REF:0000107 |
NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:89,696,420...89,796,262
|
|
G
|
Wnt3a
|
Wnt family member 3A
|
involved_in
|
ISO IEA
|
(PMID:19883499) GO_REF:0000107
|
RGD Ensembl |
PMID:19883499 |
GO_REF:0000107 |
NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324
|
|
G
|
Wnt7a
|
Wnt family member 7A
|
involved_in
|
ISO IEA
|
(PMID:20530549) GO_REF:0000107
|
RGD Ensembl |
PMID:20530549 |
GO_REF:0000107 |
NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Cacna2d3
|
calcium voltage-gated channel auxiliary subunit alpha2delta 3
|
involved_in
|
ISO IEA
|
(PMID:30683685) GO_REF:0000107
|
RGD Ensembl |
PMID:30683685 |
GO_REF:0000107 |
NCBI chr16:4,105,048...4,919,037
Ensembl chr16:4,098,445...4,912,351
|
|
G
|
Nlgn1
|
neuroligin 1
|
involved_in
|
IDA IMP EXP
|
PMID:10892652
|
SynGO |
PMID:10892652 PMID:10892652 PMID:10892652 |
RGD:13702379, RGD:13702379, RGD:13702379 |
NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lrrtm4
|
leucine rich repeat transmembrane neuronal 4
|
acts_upstream_of_or_within
|
ISO
|
(PMID:23911104)
|
RGD |
PMID:23911104 |
|
NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Chd4
|
chromodomain helicase DNA binding protein 4
|
involved_in
|
IDA IMP
|
PMID:24991957
|
SynGO |
PMID:24991957 PMID:24991957 |
RGD:9587770, RGD:9587770 |
NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
|
|
G
|
Chrnb2
|
cholinergic receptor nicotinic beta 2 subunit
|
acts_upstream_of_or_within
|
ISO
|
MGI:2158714 (PMID:17301182)
|
RGD |
PMID:17301182 |
|
NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
|
|
G
|
Clstn3
|
calsyntenin 3
|
involved_in
|
ISO
|
(PMID:33101212)
|
RGD |
PMID:33101212 |
|
NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:157,331,494...157,364,769
|
|
G
|
Crtac1
|
cartilage acidic protein 1
|
involved_in
|
ISO IEA
|
(PMID:33658590) GO_REF:0000107
|
RGD Ensembl |
PMID:33658590 |
GO_REF:0000107 |
NCBI chr 1:241,091,679...241,233,677
Ensembl chr 1:241,078,864...241,233,421
|
|
G
|
Ctnnb1
|
catenin beta 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:28641114)
|
Ensembl RGD |
PMID:28641114 |
GO_REF:0000107 |
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
|
|
G
|
Elavl2
|
ELAV like RNA binding protein 2
|
involved_in
|
IMP IDA
|
PMID:24991957
|
SynGO |
PMID:24991957 PMID:24991957 |
RGD:9587770, RGD:9587770 |
NCBI chr 5:105,960,872...106,086,463
Ensembl chr 5:105,960,875...106,109,097
|
|
G
|
Ephb2
|
Eph receptor B2
|
involved_in
|
ISO IEA
|
(PMID:17122040) GO_REF:0000107
|
RGD Ensembl |
PMID:17122040 |
GO_REF:0000107 |
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059
|
|
G
|
Exoc7
|
exocyst complex component 7
|
involved_in
|
IDA IMP
|
PMID:30374940
|
SynGO |
PMID:30374940 PMID:30374940 |
RGD:405650391, RGD:405650391 |
NCBI chr10:102,019,805...102,039,333
Ensembl chr10:101,520,927...101,540,561
|
|
G
|
Ghsr
|
growth hormone secretagogue receptor
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:3040440 (PMID:17060947) GO_REF:0000107
|
RGD Ensembl |
PMID:17060947 |
GO_REF:0000107 |
NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865
|
|
G
|
Grin1
|
glutamate ionotropic receptor NMDA type subunit 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:2655232|MGI:2655237 (PMID:12657691)
|
RGD |
PMID:12657691 |
|
NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603
|
|
G
|
Icam5
|
intercellular adhesion molecule 5
|
involved_in
|
ISO IEA
|
(PMID:23015592) GO_REF:0000107
|
RGD Ensembl |
PMID:23015592 |
GO_REF:0000107 |
NCBI chr 8:27,843,563...27,851,767
Ensembl chr 8:19,568,600...19,575,588
|
|
G
|
L1cam
|
L1 cell adhesion molecule
|
involved_in
|
ISO
|
(PMID:30846310)
|
RGD |
PMID:30846310 |
|
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
|
|
G
|
Lrrtm4
|
leucine rich repeat transmembrane neuronal 4
|
involved_in
|
ISO
|
(PMID:23911103)
|
RGD |
PMID:23911103 |
|
NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
|
|
G
|
Mef2c
|
myocyte enhancer factor 2C
|
involved_in
|
ISO
|
(PMID:18599438)
|
RGD |
PMID:18599438 |
|
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880
|
|
G
|
Nectin1
|
nectin cell adhesion molecule 1
|
|
IMP
|
|
RGD |
PMID:11827984 |
RGD:1599809 |
NCBI chr 8:52,998,662...53,061,745
Ensembl chr 8:44,101,776...44,189,787
|
|
G
|
Negr1
|
neuronal growth regulator 1
|
|
IMP
|
|
RGD |
PMID:18602091 |
RGD:40886282 |
NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730
|
|
G
|
Nrg2
|
neuregulin 2
|
involved_in
|
IDA IMP
|
PMID:26674872
|
SynGO |
PMID:26674872 PMID:26674872 |
RGD:11070025, RGD:11070025 |
NCBI chr18:27,616,542...27,798,505
Ensembl chr18:27,619,661...27,798,505
|
|
G
|
Ntn1
|
netrin 1
|
involved_in
|
ISO
|
(PMID:24174661)
|
RGD |
PMID:24174661 |
|
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
|
|
G
|
Ogt
|
O-linked N-acetylglucosamine (GlcNAc) transferase
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:28143929)
|
Ensembl RGD |
PMID:28143929 |
GO_REF:0000107 |
NCBI chr X:70,811,317...70,856,123
Ensembl chr X:66,771,349...66,816,146
|
|
G
|
Pdlim5
|
PDZ and LIM domain 5
|
involved_in
|
IDA
|
PMID:19900557
|
UniProt |
PMID:19900557 |
RGD:8554803 |
NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
|
|
G
|
Podxl
|
podocalyxin-like
|
involved_in
|
ISO
|
(PMID:20706633)
|
RGD |
PMID:20706633 |
|
NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899
|
|
G
|
Ppp1r9a
|
protein phosphatase 1, regulatory subunit 9A
|
|
IMP
|
|
RGD |
PMID:15473970 |
RGD:10043779 |
NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
|
|
G
|
Rab17
|
RAB17, member RAS oncogene family
|
involved_in
|
ISO IEA
|
(PMID:22291024) GO_REF:0000107
|
RGD Ensembl |
PMID:22291024 |
GO_REF:0000107 |
NCBI chr 9:91,552,924...91,566,759
Ensembl chr 9:91,553,464...91,566,451
|
|
G
|
Rap2a
|
RAP2A, member of RAS oncogene family
|
involved_in
|
ISO IEA
|
(PMID:30063210) GO_REF:0000107
|
RGD Ensembl |
PMID:30063210 |
GO_REF:0000107 |
NCBI chr15:97,596,848...97,597,338
Ensembl chr15:97,596,020...97,624,138
|
|
G
|
Rtn4r
|
reticulon 4 receptor
|
involved_in
|
ISO
|
(PMID:26838771)
|
RGD |
PMID:26838771 |
|
NCBI chr11:96,348,613...96,373,554
Ensembl chr11:82,844,309...82,869,466
|
|
G
|
Sdc2
|
syndecan 2
|
involved_in
|
IDA IMP
|
PMID:17548511
|
SynGO |
PMID:17548511 PMID:17548511 |
RGD:405650239, RGD:405650239 |
NCBI chr 7:64,127,185...64,239,885
Ensembl chr 7:64,127,110...64,241,081
|
|
G
|
Sema4d
|
semaphorin 4D
|
involved_in
|
ISO IEA
|
(PMID:24036351) GO_REF:0000107
|
RGD Ensembl |
PMID:24036351 |
GO_REF:0000107 |
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
|
|
G
|
Setd5
|
SET domain containing 5
|
involved_in
|
ISO IEA
|
(PMID:31515109) GO_REF:0000107
|
RGD Ensembl |
PMID:31515109 |
GO_REF:0000107 |
NCBI chr 4:146,217,172...146,294,896
Ensembl chr 4:146,217,180...146,294,894
|
|
G
|
Snap25
|
synaptosome associated protein 25
|
|
IEP
|
|
RGD |
PMID:15478103 |
RGD:1581079 |
NCBI chr 3:144,494,579...144,576,449
Ensembl chr 3:124,041,898...124,123,760
|
|
G
|
Srcin1
|
SRC kinase signaling inhibitor 1
|
involved_in
|
ISO
|
(PMID:28641114)
|
RGD |
PMID:28641114 |
|
NCBI chr10:82,502,911...82,569,882
Ensembl chr10:82,504,393...82,571,040
|
|
G
|
Srgap2
|
SLIT-ROBO Rho GTPase activating protein 2
|
involved_in
|
ISO IEA
|
(PMID:22559944) GO_REF:0000107
|
RGD Ensembl |
PMID:22559944 |
GO_REF:0000107 |
NCBI chr13:42,745,956...42,967,091
Ensembl chr13:42,745,947...42,967,058
|
|
G
|
Srpx2
|
sushi-repeat-containing protein, X-linked 2
|
involved_in
|
IDA IMP
|
PMID:24179158
|
SynGO |
PMID:24179158 PMID:24179158 |
RGD:8553698, RGD:8553698 |
NCBI chr X:97,106,455...97,132,197
Ensembl chr X:97,106,561...97,132,195
|
|
G
|
Vldlr
|
very low density lipoprotein receptor
|
involved_in
|
ISO IEA
|
(PMID:25644714) GO_REF:0000107
|
RGD Ensembl |
PMID:25644714 |
GO_REF:0000107 |
NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Adgrb3
|
adhesion G protein-coupled receptor B3
|
involved_in
|
ISO IEA
|
(PMID:25611509) GO_REF:0000107
|
RGD Ensembl |
PMID:25611509 |
GO_REF:0000107 |
NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
|
|
G
|
Ago2
|
argonaute RISC catalytic component 2
|
involved_in
|
ISO IEA
|
(PMID:29735530) GO_REF:0000107
|
RGD Ensembl |
PMID:29735530 |
GO_REF:0000107 |
NCBI chr 7:106,907,209...106,994,124
Ensembl chr 7:105,029,120...105,104,974
|
|
G
|
C1ql2
|
complement C1q like 2
|
involved_in
|
ISO IEA
|
(PMID:25611509) GO_REF:0000107
|
RGD Ensembl |
PMID:25611509 |
GO_REF:0000107 |
NCBI chr13:31,471,150...31,472,685
Ensembl chr13:31,471,150...31,472,689
|
|
G
|
Camk2b
|
calcium/calmodulin-dependent protein kinase II beta
|
involved_in
|
IDA IEP IMP
|
PMID:17404223
|
SynGO |
PMID:17404223 PMID:17404223 PMID:17404223 |
RGD:13432239, RGD:13432239, RGD:13432239 |
NCBI chr14:85,059,166...85,148,121
Ensembl chr14:80,845,238...80,933,994
|
|
G
|
Clstn1
|
calsyntenin 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:24966372)
|
Ensembl RGD |
PMID:24966372 |
GO_REF:0000107 |
NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583
|
|
G
|
Cntnap1
|
contactin associated protein 1
|
involved_in
|
ISO
|
(PMID:33148880)
|
RGD |
PMID:33148880 |
|
NCBI chr10:86,610,140...86,625,896
Ensembl chr10:86,111,643...86,125,611
|
|
G
|
Dab1
|
DAB adaptor protein 1
|
involved_in
|
ISO IEA
|
(PMID:27624722) GO_REF:0000107
|
RGD Ensembl |
PMID:27624722 |
GO_REF:0000107 |
NCBI chr 5:123,621,510...124,742,585
Ensembl chr 5:119,140,533...119,510,552
|
|
G
|
Disc1
|
DISC1 scaffold protein
|
involved_in
|
ISO IEA
|
(PMID:17825401) GO_REF:0000107
|
RGD Ensembl |
PMID:17825401 |
GO_REF:0000107 |
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
|
|
G
|
Dlgap4
|
DLG associated protein 4
|
involved_in
|
ISO IEA
|
(PMID:30664629) GO_REF:0000107
|
RGD Ensembl |
PMID:30664629 |
GO_REF:0000107 |
NCBI chr 3:145,124,189...145,271,791
Ensembl chr 3:145,175,479...145,270,490
|
|
G
|
Fgf22
|
fibroblast growth factor 22
|
involved_in
|
ISO
|
(PMID:20505669), (PMID:27627962)
|
RGD |
PMID:20505669 PMID:27627962 |
|
NCBI chr 7:10,598,254...10,600,945
Ensembl chr 7:9,948,071...9,950,486
|
|
G
|
Fgf7
|
fibroblast growth factor 7
|
involved_in
|
ISO IEA
|
(PMID:20505669) GO_REF:0000107
|
RGD Ensembl |
PMID:20505669 |
GO_REF:0000107 |
NCBI chr 3:133,734,557...133,786,678
Ensembl chr 3:113,281,283...113,332,929
|
|
G
|
Igsf9
|
immunoglobulin superfamily, member 9
|
involved_in
|
IMP IDA
|
PMID:15340156
|
SynGO |
PMID:15340156 PMID:15340156 |
RGD:405650278, RGD:405650278 |
NCBI chr13:84,948,643...84,965,616
Ensembl chr13:84,948,619...84,965,607
|
|
G
|
Mdga1
|
MAM domain containing glycosylphosphatidylinositol anchor 1
|
involved_in
|
IDA IMP
|
PMID:35532105
|
SynGO |
PMID:35532105 PMID:35532105 |
RGD:405650385, RGD:405650385 |
NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
|
|
G
|
Mdga2
|
MAM domain containing glycosylphosphatidylinositol anchor 2
|
involved_in
|
IDA IMP
|
PMID:35532105
|
SynGO |
PMID:35532105 PMID:35532105 |
RGD:405650385, RGD:405650385 |
NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126
|
|
G
|
Nefl
|
neurofilament light chain
|
involved_in
|
ISO IEA
|
(PMID:25232125) GO_REF:0000107
|
RGD Ensembl |
PMID:25232125 |
GO_REF:0000107 |
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
|
|
G
|
Nrg2
|
neuregulin 2
|
involved_in
|
IDA IMP
|
PMID:26674872
|
SynGO |
PMID:26674872 PMID:26674872 |
RGD:11070025, RGD:11070025 |
NCBI chr18:27,616,542...27,798,505
Ensembl chr18:27,619,661...27,798,505
|
|
G
|
Nrn1
|
neuritin 1
|
involved_in
|
ISO
|
(PMID:22190461)
|
RGD |
PMID:22190461 |
|
NCBI chr17:28,129,969...28,138,898
Ensembl chr17:28,129,977...28,138,896
|
|
G
|
Reln
|
reelin
|
involved_in
|
ISO
|
(PMID:27624722)
|
RGD |
PMID:27624722 |
|
NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211
|
|
G
|
Rock1
|
Rho-associated coiled-coil containing protein kinase 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:30826947)
|
Ensembl RGD |
PMID:30826947 |
GO_REF:0000107 |
NCBI chr18:1,387,360...1,509,218
Ensembl chr18:1,115,905...1,235,571
|
|
G
|
Rock2
|
Rho-associated coiled-coil containing protein kinase 2
|
involved_in
|
ISO
|
(PMID:30826947)
|
RGD |
PMID:30826947 |
|
NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:39,679,082...39,774,031
|
|
G
|
Sdc2
|
syndecan 2
|
involved_in
|
IMP IDA
|
PMID:9971750
|
SynGO |
PMID:9971750 PMID:9971750 |
RGD:405650346, RGD:405650346 |
NCBI chr 7:64,127,185...64,239,885
Ensembl chr 7:64,127,110...64,241,081
|
|
G
|
Sema7a
|
semaphorin 7A (John Milton Hagen blood group)
|
involved_in
|
ISO IEA
|
(PMID:25201975) GO_REF:0000107
|
RGD Ensembl |
PMID:25201975 |
GO_REF:0000107 |
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
|
|
G
|
Snx27
|
sorting nexin 27
|
involved_in
|
ISO
|
(PMID:33330482)
|
RGD |
PMID:33330482 |
|
NCBI chr 2:182,135,904...182,218,906
Ensembl chr 2:182,135,905...182,218,906
|
|
G
|
Vps35
|
VPS35 retromer complex component
|
involved_in
|
ISO IEA
|
(PMID:26521016) GO_REF:0000107
|
RGD Ensembl |
PMID:26521016 |
GO_REF:0000107 |
NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
|
|
G
|
Ywhaz
|
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
|
involved_in
|
ISO IEA
|
(PMID:16959763) GO_REF:0000107
|
RGD Ensembl |
PMID:16959763 |
GO_REF:0000107 |
NCBI chr 7:67,941,353...67,963,651
Ensembl chr 7:67,940,017...67,963,668
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Adgrb3
|
adhesion G protein-coupled receptor B3
|
involved_in
|
ISO IEA
|
(PMID:25611509) GO_REF:0000107
|
RGD Ensembl |
PMID:25611509 |
GO_REF:0000107 |
NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
|
|
G
|
Adgrg1
|
adhesion G protein-coupled receptor G1
|
involved_in
|
ISS
|
GO_REF:0000024
|
UniProt |
|
GO_REF:0000024 |
NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
|
|
G
|
C1ql1
|
complement C1q like 1
|
involved_in
|
ISO IEA
|
(PMID:25611509) GO_REF:0000107
|
RGD Ensembl |
PMID:25611509 |
GO_REF:0000107 |
NCBI chr10:87,902,125...87,909,556
Ensembl chr10:87,902,137...87,909,310
|
|
G
|
Cd47
|
Cd47 molecule
|
involved_in
|
ISO
|
(PMID:30308165)
|
RGD |
PMID:30308165 |
|
NCBI chr11:50,906,052...50,970,000
Ensembl chr11:50,906,177...50,969,425
|
|
G
|
Cdk5
|
cyclin-dependent kinase 5
|
involved_in
|
IDA IMP EXP
|
PMID:17143272
|
SynGO |
PMID:17143272 PMID:17143272 PMID:17143272 |
RGD:8554385, RGD:8554385, RGD:8554385 |
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
|
|
G
|
Epha4
|
Eph receptor A4
|
involved_in
|
IMP IEP EXP IDA
|
PMID:17143272
|
SynGO |
PMID:17143272 PMID:17143272 PMID:17143272 PMID:17143272 |
RGD:8554385, RGD:8554385, RGD:8554385, RGD:8554385 |
NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139
|
|
G
|
Itgb1
|
integrin subunit beta 1
|
involved_in
|
ISO
|
(PMID:24831527)
|
RGD |
PMID:24831527 |
|
NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195
|
|
G
|
Ngef
|
neuronal guanine nucleotide exchange factor
|
involved_in
|
ISO IEA
|
(PMID:17143272) GO_REF:0000107
|
RGD Ensembl |
PMID:17143272 |
GO_REF:0000107 |
NCBI chr 9:88,146,956...88,244,454
Ensembl chr 9:88,146,956...88,244,914
|
|
G
|
Plxnc1
|
plexin C1
|
involved_in
|
ISO IEA
|
(PMID:24831527) GO_REF:0000107
|
RGD Ensembl |
PMID:24831527 |
GO_REF:0000107 |
NCBI chr 7:29,390,038...29,543,985
Ensembl chr 7:29,390,048...29,543,779
|
|
G
|
Sarm1
|
sterile alpha and TIR motif containing 1
|
involved_in
|
ISO IEA
|
(PMID:22678360) GO_REF:0000107
|
RGD Ensembl |
PMID:22678360 |
GO_REF:0000107 |
NCBI chr10:63,369,456...63,393,016
Ensembl chr10:63,369,456...63,392,822
|
|
G
|
Vangl2
|
VANGL planar cell polarity protein 2
|
involved_in
|
ISO IEA
|
(PMID:34407949) GO_REF:0000107
|
RGD Ensembl |
PMID:34407949 |
GO_REF:0000107 |
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Chrna7
|
cholinergic receptor nicotinic alpha 7 subunit
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involved_in
|
IEA ISO
|
GO_REF:0000107 GO:0051247 (PMID:20164328)
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Ensembl RGD |
PMID:20164328 |
GO_REF:0000107 |
NCBI chr 1:126,123,425...126,249,181
Ensembl chr 1:116,714,711...116,837,240
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G
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Ctnna2
|
catenin alpha 2
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involved_in
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ISO
|
(PMID:15034585)
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RGD |
PMID:15034585 |
|
NCBI chr 4:109,294,249...110,443,409
Ensembl chr 4:109,293,978...110,443,522
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G
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Dmpk
|
DM1 protein kinase
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involved_in
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ISO IEA
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(PMID:12612014) GO_REF:0000107
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RGD Ensembl |
PMID:12612014 |
GO_REF:0000107 |
NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
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|
G
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Drd2
|
dopamine receptor D2
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|
IDA
|
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RGD |
PMID:22216301 |
RGD:6907446 |
NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875
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|
G
|
Ncan
|
neurocan
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acts_upstream_of_or_within
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ISO
|
MGI:2182149 (PMID:11486035)
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RGD |
PMID:11486035 |
|
NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
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|
G
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Ppp1r9a
|
protein phosphatase 1, regulatory subunit 9A
|
|
IMP
|
|
RGD |
PMID:15473970 |
RGD:10043779 |
NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
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|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Agrn
|
agrin
|
acts_upstream_of_or_within
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
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G
|
Colq
|
collagen like tail subunit of asymmetric acetylcholinesterase
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1857733 (PMID:20053883) GO_REF:0000107
|
RGD Ensembl |
PMID:20053883 |
GO_REF:0000107 |
NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107
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|
G
|
Lin7a
|
lin-7 homolog A, crumbs cell polarity complex component
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:42,586,704...42,742,609
Ensembl chr 7:42,586,719...42,730,550
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|
G
|
Lin7b
|
lin-7 homolog B, crumbs cell polarity complex component
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:104,983,368...104,986,795
Ensembl chr 1:95,846,243...95,849,977
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|
G
|
Lin7c
|
lin-7 homolog C, crumbs cell polarity complex component
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:96,406,800...96,417,779
Ensembl chr 3:96,406,813...96,417,728
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|
G
|
Musk
|
muscle associated receptor tyrosine kinase
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involved_in acts_upstream_of_or_within
|
ISS ISO
|
GO_REF:0000024 MGI:1929066 (PMID:8653786)
|
UniProt RGD |
PMID:8653786 |
GO_REF:0000024 |
NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
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|
G
|
Mycbp2
|
MYC binding protein 2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
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|
G
|
Pdzd11
|
PDZ domain containing 11
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:65,718,689...65,721,742
Ensembl chr X:65,704,067...65,721,642
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|
G
|
Six1
|
SIX homeobox 1
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:106034 (PMID:21884692) GO_REF:0000107
|
RGD Ensembl |
PMID:21884692 |
GO_REF:0000107 |
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
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|
G
|
Six4
|
SIX homeobox 4
|
acts_upstream_of_or_within
|
ISO
|
MGI:102780 (PMID:21884692)
|
RGD |
PMID:21884692 |
|
NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992
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|
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|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lrfn3
|
leucine rich repeat and fibronectin type III domain containing 3
|
involved_in
|
IDA IMP
|
PMID:27480238
|
SynGO |
PMID:27480238 PMID:27480238 |
RGD:13702184, RGD:13702184 |
NCBI chr 1:85,616,862...85,623,725
Ensembl chr 1:85,616,868...85,623,725
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|
G
|
Magi2
|
membrane associated guanylate kinase, WW and PDZ domain containing 2
|
involved_in
|
IMP IDA
|
PMID:23751499
|
SynGO |
PMID:23751499 PMID:23751499 |
RGD:13702234, RGD:13702234 |
NCBI chr 4:15,278,518...16,762,427
Ensembl chr 4:14,386,399...15,870,240
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|
G
|
Mapk14
|
mitogen activated protein kinase 14
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:17988630)
|
Ensembl RGD |
PMID:17988630 |
GO_REF:0000107 |
NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,749,670...6,810,589
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|
G
|
Mdga1
|
MAM domain containing glycosylphosphatidylinositol anchor 1
|
involved_in
|
ISO
|
(PMID:28641112)
|
RGD |
PMID:28641112 |
|
NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471
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|
G
|
Mdga2
|
MAM domain containing glycosylphosphatidylinositol anchor 2
|
involved_in
|
ISO
|
(PMID:27608760)
|
RGD |
PMID:27608760 |
|
NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126
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|
G
|
Pcdh8
|
protocadherin 8
|
involved_in
|
IDA IMP
|
PMID:17988630
|
SynGO |
PMID:17988630 PMID:17988630 |
RGD:13702360, RGD:13702360 |
NCBI chr15:55,198,470...55,203,039
Ensembl chr15:55,198,459...55,205,872
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|
G
|
Taok2
|
TAO kinase 2
|
involved_in
|
IDA IEP IMP
|
PMID:17988630
|
SynGO |
PMID:17988630 PMID:17988630 PMID:17988630 |
RGD:13702360, RGD:13702360, RGD:13702360 |
NCBI chr 1:190,906,236...190,925,359
Ensembl chr 1:181,475,711...181,494,613
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|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Nlgn3
|
neuroligin 3
|
involved_in
|
ISS ISO
|
GO_REF:0000024 PMID:21808020 (PMID:21808020)
|
BHF-UCL RGD |
PMID:21808020 PMID:21808020 |
GO_REF:0000024, RGD:8553412 |
NCBI chr X:70,469,251...70,497,380
Ensembl chr X:66,429,458...66,451,876
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G
|
Picalm
|
phosphatidylinositol binding clathrin assembly protein
|
|
IMP
|
|
RGD |
PMID:22851330 |
RGD:13506174 |
NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
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G
|
Snap91
|
synaptosome associated protein 91
|
|
IMP
|
|
RGD |
PMID:22851330 |
RGD:13506174 |
NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
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|
G
|
Vps35
|
VPS35 retromer complex component
|
involved_in
|
ISO
|
(PMID:26618722)
|
RGD |
PMID:26618722 |
|
NCBI chr19:37,938,989...37,974,887
Ensembl chr19:21,765,749...21,801,618
|
|
Term paths to the root
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