Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Amot | Rat | Brain Neoplasms | | ISO | AMOT (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:27935819 | |
|
Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Amot | Rat | Brain Neoplasms | | ISO | AMOT (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:27935819 | |
|
|
|
|
|
|
|
|
|
|
|
# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
4. | The polarity protein Angiomotin p130 controls dendritic spine maturation. | Wigerius M, etal., J Cell Biol. 2018 Feb 5;217(2):715-730. doi: 10.1083/jcb.201705184. Epub 2018 Jan 9. |
5. | A tight junction-associated Merlin-angiomotin complex mediates Merlin's regulation of mitogenic signaling and tumor suppressive functions. | Yi C, etal., Cancer Cell. 2011 Apr 12;19(4):527-40. doi: 10.1016/j.ccr.2011.02.017. |
PMID:11257124 | PMID:12676095 | PMID:12902404 | PMID:16043488 | PMID:17397395 | PMID:17699752 | PMID:18824598 | PMID:18850735 | PMID:19546164 | PMID:21205866 | PMID:25416956 | PMID:30039887 |
PMID:31325776 | PMID:31940260 |
Amot (Rattus norvegicus - Norway rat) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AMOT (Homo sapiens - human) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Amot (Mus musculus - house mouse) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Amot (Chinchilla lanigera - long-tailed chinchilla) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AMOT (Pan paniscus - bonobo/pygmy chimpanzee) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AMOT (Canis lupus familiaris - dog) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Amot (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AMOT (Sus scrofa - pig) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AMOT (Chlorocebus sabaeus - green monkey) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Amot (Heterocephalus glaber - naked mole-rat) |
|
.
Variants in Amot
31 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
alimentary part of gastrointestinal system
|
appendage
|
circulatory system
|
ectoderm
|
endocrine system
|
endoderm
|
exocrine system
|
hemolymphoid system
|
hepatobiliary system
|
integumental system
|
mesenchyme
|
mesoderm
|
nervous system
|
renal system
|
reproductive system
|
respiratory system
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001432880 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001432881 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001432882 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001432883 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006227504 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006227505 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006227506 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006227507 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006227508 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006257420 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006257421 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006257422 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006257423 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006257424 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063280350 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | CH474047 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JAXUCZ010000021 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000049482 ⟹ ENSRNOP00000040549 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENSRNOT00000090918 ⟹ ENSRNOP00000070184 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
RefSeq Acc Id: | XM_006257420 ⟹ XP_006257482 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
|
||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | XM_006257421 ⟹ XP_006257483 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
|
||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | XM_006257422 ⟹ XP_006257484 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
|
||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | XM_006257423 ⟹ XP_006257485 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
|
||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | XM_006257424 ⟹ XP_006257486 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
|
||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | XM_063280350 ⟹ XP_063136420 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Protein RefSeqs | NP_001419809 | (Get FASTA) | NCBI Sequence Viewer |
NP_001419810 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001419811 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001419812 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006257482 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006257483 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006257484 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006257485 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006257486 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063136420 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | EDL85179 | (Get FASTA) | NCBI Sequence Viewer |
Ensembl Protein | ENSRNOP00000070184.2 |
RefSeq Acc Id: | XP_006257486 ⟸ XM_006257424 |
- Peptide Label: | isoform X2 |
- Sequence: |
RefSeq Acc Id: | XP_006257485 ⟸ XM_006257423 |
- Peptide Label: | isoform X1 |
- Sequence: |
RefSeq Acc Id: | XP_006257482 ⟸ XM_006257420 |
- Peptide Label: | isoform X1 |
- Sequence: |
RefSeq Acc Id: | XP_006257484 ⟸ XM_006257422 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A0G2JX94 (UniProtKB/TrEMBL), A6KGA0 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006257483 ⟸ XM_006257421 |
- Peptide Label: | isoform X1 |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000070184 ⟸ ENSRNOT00000090918 |
Ensembl Acc Id: | ENSRNOP00000040549 ⟸ ENSRNOT00000049482 |
RefSeq Acc Id: | XP_063136420 ⟸ XM_063280350 |
- Peptide Label: | isoform X2 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-A0A0G2JX94-F1-model_v2 | AlphaFold | A0A0G2JX94 | 1-1191 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:1564027 | AgrOrtholog |
BioCyc Gene | G2FUF-1471 | BioCyc |
Ensembl Genes | ENSRNOG00000007345 | Ensembl, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000090918.2 | UniProtKB/TrEMBL |
InterPro | Angiomotin | UniProtKB/TrEMBL |
Angiomotin-like_reg | UniProtKB/TrEMBL | |
Angiomotin_C | UniProtKB/TrEMBL | |
NCBI Gene | 300289 | ENTREZGENE |
PANTHER | ANGIOMOTIN | UniProtKB/TrEMBL |
ANGIOMOTIN | UniProtKB/TrEMBL | |
Pfam | Angiomotin_C | UniProtKB/TrEMBL |
PhenoGen | Amot | PhenoGen |
PRINTS | ANGIOMOTIN | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000007345 | RatGTEx |
UniProt | A0A0G2JX94 | ENTREZGENE, UniProtKB/TrEMBL |
A6KGA0 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2008-03-06 | Amot | angiomotin | RGD1564027_predicted | similar to angiomotin (predicted) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2006-03-07 | RGD1564027_predicted | similar to angiomotin (predicted) | LOC300289 | similar to angiomotin | Symbol and Name status set to approved | 1299863 | APPROVED |
2006-02-09 | LOC300289 | similar to angiomotin | Symbol and Name status set to provisional | 70820 | PROVISIONAL |