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Gene: Pcdh8 (protocadherin 8) Rattus norvegicus
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Symbol: Pcdh8
Name: protocadherin 8
Description: Predicted to have calcium ion binding activity. Involved in chemical synaptic transmission; modulation of chemical synaptic transmission; and regulation of synaptic membrane adhesion. Localizes to the Schaffer collateral - CA1 synapse; glutamatergic synapse; and integral component of postsynaptic membrane. Orthologous to human PCDH8 (protocadherin 8); INTERACTS WITH 1,3-dinitrobenzene; 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: activity-regulated cadherin-like protein; Arcadlin; protocadherin-8
Orthologs:
Homo sapiens (human) : PCDH8 (protocadherin 8)  HGNC  Alliance
Mus musculus (house mouse) : Pcdh8 (protocadherin 8)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pcdh8 (protocadherin 8)
Canis lupus familiaris (dog) : LOC485469 (protocadherin-8)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pcdh8 (protocadherin 8)
Sus scrofa (pig) : LOC100155738 (protocadherin-8)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01562,196,469 - 62,201,498 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01565,856,803 - 65,861,374 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41561,056,994 - 61,060,741 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11561,072,773 - 61,076,521 (-)NCBI
Celera1554,773,168 - 54,776,945 (-)NCBICelera
Cytogenetic Map15q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pcdh8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 69350
Created: 2001-11-14
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.