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Gene: Tpbg (trophoblast glycoprotein) Rattus norvegicus
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Symbol: Tpbg
Name: trophoblast glycoprotein
RGD ID: 621453
Description: Predicted to be involved in positive regulation of synapse assembly. Predicted to localize to endoplasmic reticulum. Orthologous to human TPBG (trophoblast glycoprotein); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 5T4; 5T4 oncofetal trophoblast glycoprotein; 5T4 oncotrophoblast glycoprotein; MGC93332; WAIF1; wnt-activated inhibitory factor 1
Orthologs:
Homo sapiens (human) : TPBG (trophoblast glycoprotein)  HGNC  Alliance
Mus musculus (house mouse) : Tpbg (trophoblast glycoprotein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tpbg (trophoblast glycoprotein)
Pan paniscus (bonobo/pygmy chimpanzee) : TPBG (trophoblast glycoprotein)
Canis lupus familiaris (dog) : TPBG (trophoblast glycoprotein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tpbg (trophoblast glycoprotein)
Sus scrofa (pig) : TPBG (trophoblast glycoprotein)
Chlorocebus sabaeus (African green monkey) : TPBG (trophoblast glycoprotein)
Heterocephalus glaber (naked mole-rat) : Tpbg (trophoblast glycoprotein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0893,491,761 - 93,495,132 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl893,491,761 - 93,495,130 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0893,006,542 - 93,009,913 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4891,075,960 - 91,079,329 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1891,095,414 - 91,098,784 (+)NCBI
Celera886,406,590 - 86,409,959 (+)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tpbg
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621453
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.