Gene: Samd4a (sterile alpha motif domain containing 4A) Rattus norvegicus
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Symbol: Samd4a
Name: sterile alpha motif domain containing 4A
Description: ENCODES a protein that exhibits translation repressor activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); substance-related disorder (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); fibrillar center (ortholog); INTERACTS WITH 6-propyl-2-thiouracil; aflatoxin B1; bisphenol A
AGR Description: Predicted to have mRNA binding activity and translation repressor activity; predicted to be involved in regulation of gene expression; predicted to localize to several cellular components, including the cell junction, cytoplasm, and intracellular organelle; orthologous to human SAMD4A (sterile alpha motif domain containing 4A).
Merged Description: Predicted to have mRNA binding activity and translation repressor activity; predicted to be involved in regulation of gene expression; predicted to localize to several cellular components, including the cell junction, cytoplasm, and intracellular organelle; orthologous to human SAMD4A (sterile alpha motif domain containing 4A); INTERACTS WITH 6-propyl-2-thiouracil; aflatoxin B1; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305826; protein Smaug homolog 1; Samd4; smaug 1; sterile alpha motif domain containing 4; sterile alpha motif domain-containing protein 4A
Orthologs:
Homo sapiens (human) : SAMD4A (sterile alpha motif domain containing 4A)  HGNC  Alliance
Mus musculus (house mouse) : Samd4 (sterile alpha motif domain containing 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Samd4a (sterile alpha motif domain containing 4A)
Pan paniscus (bonobo/pygmy chimpanzee) : SAMD4A (sterile alpha motif domain containing 4A)
Canis lupus familiaris (dog) : SAMD4A (sterile alpha motif domain containing 4A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Samd4a (sterile alpha motif domain containing 4A)
Sus scrofa (pig) : SAMD4A (sterile alpha motif domain containing 4A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01523,666,543 - 23,879,067 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01527,721,129 - 27,820,974 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41522,847,701 - 22,952,499 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11522,749,949 - 22,967,670 (+)NCBI
Celera1520,645,446 - 20,745,819 (+)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Samd4a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310361
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.