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Gene: Ncan (neurocan) Rattus norvegicus
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Symbol: Ncan
Name: neurocan
RGD ID: 619941
Description: Predicted to have calcium ion binding activity; carbohydrate binding activity; and hyaluronic acid binding activity. Predicted to be involved in central nervous system development; regulation of synapse structural plasticity; and skeletal system development. Localizes to perineuronal net and synapse. Orthologous to human NCAN (neurocan); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 245 kDa early postnatal core glycoprotein; chondroitin sulfate proteoglycan 3; Cspg3; LOC100911345; neurocan core protein; neurocan core protein-like
Orthologs:
Homo sapiens (human) : NCAN (neurocan)  HGNC  Alliance
Mus musculus (house mouse) : Ncan (neurocan)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ncan (neurocan)
Pan paniscus (bonobo/pygmy chimpanzee) : NCAN (neurocan)
Canis lupus familiaris (dog) : NCAN (neurocan)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ncan (neurocan)
Sus scrofa (pig) : NCAN (neurocan)
Chlorocebus sabaeus (African green monkey) : NCAN (neurocan)
Heterocephalus glaber (naked mole-rat) : Ncan (neurocan)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01621,050,243 - 21,076,707 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1621,050,243 - 21,076,707 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,900,031 - 20,926,495 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,785,175 - 19,811,651 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1619,490,684 - 19,517,054 (+)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ncan
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619941
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.