Adgrl3 (adhesion G protein-coupled receptor L3) - Rat Genome Database

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Gene: Adgrl3 (adhesion G protein-coupled receptor L3) Rattus norvegicus
Analyze
Symbol: Adgrl3
Name: adhesion G protein-coupled receptor L3
RGD ID: 620836
Description: Predicted to enable G protein-coupled receptor activity and calcium ion binding activity. Predicted to be involved in several processes, including locomotion involved in locomotory behavior; response to cocaine; and synapse organization. Predicted to act upstream of or within positive regulation of synapse assembly. Predicted to be located in membrane. Predicted to be active in several cellular components, including Schaffer collateral - CA1 synapse; glutamatergic synapse; and postsynaptic membrane. Orthologous to human ADGRL3 (adhesion G protein-coupled receptor L3); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: calcium-independent alpha-latrotoxin receptor 3; calcium-independent alpha-latrotoxin receptor homolog 3; CIRL-3; Cirl3; latrophilin 3; latrophilin-3; Lec3; lectomedin-3; Lphn3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: Adgrl3Tn(sb-T2/Bart3)2.151Mcwi   Adgrl3em1Huyc  
Genetic Models: F344-Adgrl3Tn(sb-T2/Bart3)2.151Mcwi SD-Adgrl3em1Huyc
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81426,690,891 - 27,458,132 (-)NCBIGRCr8
mRatBN7.21426,336,320 - 27,104,060 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1426,368,277 - 27,105,860 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1426,715,441 - 27,465,812 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01428,027,851 - 28,778,270 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01426,509,623 - 27,260,039 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01428,362,176 - 29,226,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1428,393,394 - 28,967,980 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01428,183,727 - 29,040,121 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41428,385,112 - 28,854,677 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11428,385,120 - 28,854,677 (-)NCBI
Celera1425,731,451 - 26,185,004 (-)NCBICelera
Cytogenetic Map14p21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
17alpha-ethynylestradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (EXP)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (ISO)
alpha-Zearalanol  (EXP)
amitrole  (EXP)
ammonium chloride  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
cadmium dichloride  (EXP)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloroprene  (ISO)
cocaine  (EXP)
coumarin  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
dichloroacetic acid  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
ethanol  (ISO)
fenvalerate  (EXP)
folic acid  (ISO)
fulvestrant  (ISO)
genistein  (ISO)
gentamycin  (EXP)
glyphosate  (EXP)
hexane-1,6-diamine  (ISO)
maneb  (ISO)
methimazole  (EXP)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
Monobutylphthalate  (EXP)
N,N-diethyl-m-toluamide  (EXP)
nickel atom  (ISO)
ozone  (ISO)
panobinostat  (ISO)
paraquat  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
permethrin  (EXP)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sotorasib  (ISO)
sulfadimethoxine  (EXP)
sulforaphane  (ISO)
sunitinib  (ISO)
thimerosal  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
trametinib  (ISO)
tremolite asbestos  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triptonide  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Involvement of the calcium-independent receptor for alpha-latrotoxin in brain ischemia. Bin Sun H, etal., Brain Res Mol Brain Res. 2002 Aug 15;104(2):246-9.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. A novel ubiquitously expressed alpha-latrotoxin receptor is a member of the CIRL family of G-protein-coupled receptors. Ichtchenko K, etal., J Biol Chem 1999 Feb 26;274(9):5491-8.
4. The calcium-independent receptor for alpha-latrotoxin from human and rodent brains interacts with members of the ProSAP/SSTRIP/Shank family of multidomain proteins. Kreienkamp HJ, etal., J Biol Chem. 2000 Oct 20;275(42):32387-90.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. Knockout of latrophilin-3 in Sprague-Dawley rats causes hyperactivity, hyper-reactivity, under-response to amphetamine, and disrupted dopamine markers. Regan SL, etal., Neurobiol Dis. 2019 Oct;130:104494. doi: 10.1016/j.nbd.2019.104494. Epub 2019 Jun 6.
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:9830014   PMID:22405201   PMID:22575564   PMID:24613359   PMID:24739570   PMID:25728924   PMID:25931508   PMID:26235030   PMID:26235031   PMID:32203648   PMID:34352385   PMID:35985692  


Genomics

Comparative Map Data
Adgrl3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81426,690,891 - 27,458,132 (-)NCBIGRCr8
mRatBN7.21426,336,320 - 27,104,060 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1426,368,277 - 27,105,860 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1426,715,441 - 27,465,812 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01428,027,851 - 28,778,270 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01426,509,623 - 27,260,039 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01428,362,176 - 29,226,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1428,393,394 - 28,967,980 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01428,183,727 - 29,040,121 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41428,385,112 - 28,854,677 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11428,385,120 - 28,854,677 (-)NCBI
Celera1425,731,451 - 26,185,004 (-)NCBICelera
Cytogenetic Map14p21NCBI
ADGRL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38461,200,326 - 62,078,335 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl461,200,326 - 62,078,335 (+)EnsemblGRCh38hg38GRCh38
GRCh37462,066,044 - 62,944,053 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36462,045,434 - 62,620,763 (+)NCBINCBI36Build 36hg18NCBI36
Build 34462,191,604 - 62,766,933NCBI
Celera459,821,669 - 60,396,265 (+)NCBICelera
Cytogenetic Map4q13.1NCBI
HuRef458,271,407 - 58,846,164 (+)NCBIHuRef
CHM1_1462,398,708 - 62,974,117 (+)NCBICHM1_1
T2T-CHM13v2.0464,638,264 - 65,515,643 (+)NCBIT2T-CHM13v2.0
Adgrl3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39581,167,600 - 81,980,556 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl581,167,985 - 81,972,980 (+)EnsemblGRCm39 Ensembl
GRCm38581,019,085 - 81,827,825 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl581,020,138 - 81,825,133 (+)EnsemblGRCm38mm10GRCm38
MGSCv37581,450,618 - 82,224,755 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36582,096,154 - 82,870,291 (+)NCBIMGSCv36mm8
Celera578,280,126 - 79,039,754 (+)NCBICelera
Cytogenetic Map5D- E1NCBI
cM Map542.62NCBI
Adgrl3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554479,943,598 - 10,709,008 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554479,912,679 - 10,708,743 (-)NCBIChiLan1.0ChiLan1.0
ADGRL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2367,717,238 - 68,578,490 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1467,937,970 - 68,799,235 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0461,876,694 - 62,742,354 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1468,315,996 - 69,183,881 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl468,323,404 - 69,003,093 (-)Ensemblpanpan1.1panPan2
ADGRL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11352,742,043 - 53,568,184 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1352,909,684 - 53,538,625 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1352,651,031 - 53,476,080 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01353,378,322 - 54,210,364 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1353,378,109 - 54,181,953 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11353,058,300 - 53,887,839 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01352,577,693 - 53,373,845 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01353,501,337 - 54,367,460 (+)NCBIUU_Cfam_GSD_1.0
Adgrl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528522,750,332 - 23,528,212 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365825,338,982 - 5,819,018 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365825,313,215 - 6,091,351 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADGRL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl860,630,117 - 60,792,899 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1859,988,280 - 60,800,177 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ADGRL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.176,726,400 - 7,261,059 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660667,000,551 - 7,860,788 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adgrl3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247617,242,948 - 7,804,418 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247617,219,269 - 8,101,988 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Adgrl3
5734 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:317
Count of miRNA genes:180
Interacting mature miRNAs:210
Transcripts:ENSRNOT00000044659, ENSRNOT00000048175, ENSRNOT00000059942
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300159Bmd61Bone mineral density QTL 615.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
2300183Bmd60Bone mineral density QTL 605.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062228035204Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141103081230320092Rat
1300140Srn3Serum renin concentration QTL 33.19blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)141487516830883947Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141762256142337007Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat

Markers in Region
D14Rat41  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,585,205 - 26,585,343 (+)MAPPERmRatBN7.2
Rnor_6.01428,610,223 - 28,610,358NCBIRnor6.0
Rnor_5.01428,430,315 - 28,430,450UniSTSRnor5.0
RGSC_v3.41428,613,332 - 28,613,468RGDRGSC3.4
RGSC_v3.41428,613,333 - 28,613,468UniSTSRGSC3.4
RGSC_v3.11428,613,272 - 28,613,579RGD
Celera1425,946,331 - 25,946,466UniSTS
SHRSP x BN Map1415.94UniSTS
SHRSP x BN Map1415.94RGD
FHH x ACI Map1426.22RGD
Cytogenetic Map14p21UniSTS
RH131601  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,632,977 - 26,633,164 (+)MAPPERmRatBN7.2
Rnor_6.01428,660,581 - 28,660,767NCBIRnor6.0
Rnor_5.01428,478,328 - 28,478,514UniSTSRnor5.0
RGSC_v3.41428,661,008 - 28,661,194UniSTSRGSC3.4
Celera1425,994,511 - 25,994,697UniSTS
RH 3.4 Map14337.9UniSTS
Cytogenetic Map14p21UniSTS
RH144064  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,374,479 - 26,374,617 (+)MAPPERmRatBN7.2
Rnor_6.01428,398,820 - 28,398,957NCBIRnor6.0
Rnor_5.01428,220,371 - 28,220,508UniSTSRnor5.0
RGSC_v3.41428,391,019 - 28,391,156UniSTSRGSC3.4
RGSC_v3.41428,316,659 - 28,316,796UniSTSRGSC3.4
Celera1425,737,358 - 25,737,495UniSTS
RH 3.4 Map14338.4UniSTS
Cytogenetic Map14p21UniSTS
BF397398  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,582,800 - 26,582,934 (+)MAPPERmRatBN7.2
Rnor_6.01428,607,818 - 28,607,951NCBIRnor6.0
Rnor_5.01428,427,910 - 28,428,043UniSTSRnor5.0
RGSC_v3.41428,610,928 - 28,611,061UniSTSRGSC3.4
Celera1425,943,926 - 25,944,059UniSTS
RH 3.4 Map14336.8UniSTS
Cytogenetic Map14p21UniSTS
BE107836  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21426,574,328 - 26,574,479 (+)MAPPERmRatBN7.2
Rnor_6.01428,599,348 - 28,599,498NCBIRnor6.0
Rnor_5.01428,419,440 - 28,419,590UniSTSRnor5.0
RGSC_v3.41428,602,458 - 28,602,608UniSTSRGSC3.4
RH 3.4 Map14340.3UniSTS
Cytogenetic Map14p21UniSTS


Genetic Models
This gene Adgrl3 is modified in the following models/strains:


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 6 66 6 21 11
Low 3 39 45 29 13 29 8 8 8 29 20 8
Below cutoff 4 12 12 12 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_130822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008769970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF063103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000044659   ⟹   ENSRNOP00000045365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,223 - 27,105,860 (-)Ensembl
Rnor_6.0 Ensembl1428,393,563 - 28,856,214 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000048175   ⟹   ENSRNOP00000039467
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
Rnor_6.0 Ensembl1428,394,103 - 28,967,980 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000059942   ⟹   ENSRNOP00000056687
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
Rnor_6.0 Ensembl1428,393,394 - 28,536,260 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000100277   ⟹   ENSRNOP00000096360
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,368,584 - 27,105,860 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000103416   ⟹   ENSRNOP00000084026
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000106702   ⟹   ENSRNOP00000092249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,368,277 - 27,105,860 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000112088   ⟹   ENSRNOP00000083229
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000112583   ⟹   ENSRNOP00000076473
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,369,054 - 27,105,860 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000112920   ⟹   ENSRNOP00000079850
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1426,368,277 - 27,105,860 (-)Ensembl
RefSeq Acc Id: NM_130822   ⟹   NP_570835
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,722,194 - 27,458,104 (-)NCBI
mRatBN7.21426,367,629 - 27,103,586 (-)NCBI
Rnor_6.01428,392,913 - 28,856,315 (-)NCBI
Rnor_5.01428,183,727 - 29,040,121 (-)NCBI
RGSC_v3.41428,385,112 - 28,854,677 (-)RGD
Celera1425,731,451 - 26,185,004 (-)RGD
Sequence:
RefSeq Acc Id: XM_008769970   ⟹   XP_008768192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,367,627 - 27,104,059 (-)NCBI
Rnor_6.01428,386,354 - 29,226,085 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599059   ⟹   XP_017454548
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,367,627 - 27,104,059 (-)NCBI
Rnor_6.01428,386,354 - 29,226,085 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039091579   ⟹   XP_038947507
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,367,627 - 27,104,056 (-)NCBI
RefSeq Acc Id: XM_039091582   ⟹   XP_038947510
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,367,627 - 27,104,056 (-)NCBI
RefSeq Acc Id: XM_039091584   ⟹   XP_038947512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,369,866 - 27,104,059 (-)NCBI
RefSeq Acc Id: XM_039091585   ⟹   XP_038947513
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,369,866 - 27,104,057 (-)NCBI
RefSeq Acc Id: XM_039091587   ⟹   XP_038947515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
mRatBN7.21426,369,866 - 27,104,056 (-)NCBI
RefSeq Acc Id: XM_063272818   ⟹   XP_063128888
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,129 (-)NCBI
RefSeq Acc Id: XM_063272819   ⟹   XP_063128889
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272820   ⟹   XP_063128890
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272821   ⟹   XP_063128891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272822   ⟹   XP_063128892
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272823   ⟹   XP_063128893
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272824   ⟹   XP_063128894
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272825   ⟹   XP_063128895
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272826   ⟹   XP_063128896
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,129 (-)NCBI
RefSeq Acc Id: XM_063272827   ⟹   XP_063128897
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272828   ⟹   XP_063128898
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272829   ⟹   XP_063128899
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272830   ⟹   XP_063128900
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272831   ⟹   XP_063128901
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,720,511 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272832   ⟹   XP_063128902
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,690,891 - 27,458,129 (-)NCBI
RefSeq Acc Id: XM_063272833   ⟹   XP_063128903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,690,891 - 27,458,132 (-)NCBI
RefSeq Acc Id: XM_063272834   ⟹   XP_063128904
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,690,891 - 27,458,125 (-)NCBI
RefSeq Acc Id: XM_063272835   ⟹   XP_063128905
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81426,690,891 - 27,458,132 (-)NCBI
Protein Sequences
Protein RefSeqs NP_570835 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768192 (Get FASTA)   NCBI Sequence Viewer  
  XP_017454548 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947507 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947510 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947512 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947513 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947515 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128888 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128889 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128890 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128891 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128892 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128893 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128894 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128895 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128896 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128897 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128898 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128899 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128900 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128901 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128902 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128903 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128904 (Get FASTA)   NCBI Sequence Viewer  
  XP_063128905 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC62660 (Get FASTA)   NCBI Sequence Viewer  
  AAC62661 (Get FASTA)   NCBI Sequence Viewer  
  AAC62662 (Get FASTA)   NCBI Sequence Viewer  
  AAC62663 (Get FASTA)   NCBI Sequence Viewer  
  AAC62664 (Get FASTA)   NCBI Sequence Viewer  
  AAC62665 (Get FASTA)   NCBI Sequence Viewer  
  AAC77816 (Get FASTA)   NCBI Sequence Viewer  
  EDL89856 (Get FASTA)   NCBI Sequence Viewer  
  EDL89857 (Get FASTA)   NCBI Sequence Viewer  
  EDL89858 (Get FASTA)   NCBI Sequence Viewer  
  EDL89859 (Get FASTA)   NCBI Sequence Viewer  
  EDL89860 (Get FASTA)   NCBI Sequence Viewer  
  EDL89861 (Get FASTA)   NCBI Sequence Viewer  
  EDL89862 (Get FASTA)   NCBI Sequence Viewer  
  EDL89863 (Get FASTA)   NCBI Sequence Viewer  
  EDL89864 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000039467.6
  ENSRNOP00000045365
  ENSRNOP00000045365.6
  ENSRNOP00000056687.5
  ENSRNOP00000076473.1
  ENSRNOP00000079850.1
  ENSRNOP00000083229
  ENSRNOP00000083229.1
  ENSRNOP00000084026
  ENSRNOP00000084026.1
  ENSRNOP00000092249.1
  ENSRNOP00000096360
  ENSRNOP00000096360.1
  ENSRNOP00055021995
  ENSRNOP00060017605
  ENSRNOP00065005477
GenBank Protein Q9Z173 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_570835   ⟸   NM_130822
- Peptide Label: precursor
- UniProtKB: Q9Z173 (UniProtKB/Swiss-Prot),   Q4LDM8 (UniProtKB/Swiss-Prot),   Q4LDM7 (UniProtKB/Swiss-Prot),   Q4LDM6 (UniProtKB/Swiss-Prot),   Q4LDM5 (UniProtKB/Swiss-Prot),   Q4LDM4 (UniProtKB/Swiss-Prot),   O88929 (UniProtKB/Swiss-Prot),   O88928 (UniProtKB/Swiss-Prot),   O88927 (UniProtKB/Swiss-Prot),   O88926 (UniProtKB/Swiss-Prot),   O88925 (UniProtKB/Swiss-Prot),   O88924 (UniProtKB/Swiss-Prot),   A0A8I6GLK1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768192   ⟸   XM_008769970
- Peptide Label: isoform X2
- UniProtKB: D4AAL4 (UniProtKB/TrEMBL),   A6JCT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454548   ⟸   XM_017599059
- Peptide Label: isoform X1
- UniProtKB: A6JCT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000056687   ⟸   ENSRNOT00000059942
RefSeq Acc Id: ENSRNOP00000039467   ⟸   ENSRNOT00000048175
RefSeq Acc Id: ENSRNOP00000045365   ⟸   ENSRNOT00000044659
RefSeq Acc Id: XP_038947510   ⟸   XM_039091582
- Peptide Label: isoform X8
- UniProtKB: A0A8I5ZV15 (UniProtKB/TrEMBL),   A6JCT5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947507   ⟸   XM_039091579
- Peptide Label: isoform X6
- UniProtKB: A6JCT5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947512   ⟸   XM_039091584
- Peptide Label: isoform X14
- UniProtKB: F1LRG7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947513   ⟸   XM_039091585
- Peptide Label: isoform X15
- UniProtKB: A6JCU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947515   ⟸   XM_039091587
- Peptide Label: isoform X16
- UniProtKB: A0A8I5ZWD6 (UniProtKB/TrEMBL),   A6JCU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000079850   ⟸   ENSRNOT00000112920
RefSeq Acc Id: ENSRNOP00000084026   ⟸   ENSRNOT00000103416
RefSeq Acc Id: ENSRNOP00000096360   ⟸   ENSRNOT00000100277
RefSeq Acc Id: ENSRNOP00000076473   ⟸   ENSRNOT00000112583
RefSeq Acc Id: ENSRNOP00000083229   ⟸   ENSRNOT00000112088
RefSeq Acc Id: ENSRNOP00000092249   ⟸   ENSRNOT00000106702
RefSeq Acc Id: XP_063128905   ⟸   XM_063272835
- Peptide Label: isoform X20
- UniProtKB: A6JCU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128903   ⟸   XM_063272833
- Peptide Label: isoform X18
- UniProtKB: A6JCU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128902   ⟸   XM_063272832
- Peptide Label: isoform X17
- UniProtKB: A6JCU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128904   ⟸   XM_063272834
- Peptide Label: isoform X19
- UniProtKB: A6JCU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128901   ⟸   XM_063272831
- Peptide Label: isoform X13
- UniProtKB: A6JCT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128900   ⟸   XM_063272830
- Peptide Label: isoform X12
- UniProtKB: A6JCT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128899   ⟸   XM_063272829
- Peptide Label: isoform X11
- UniProtKB: A6JCT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128898   ⟸   XM_063272828
- Peptide Label: isoform X10
- UniProtKB: A6JCT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128893   ⟸   XM_063272823
- Peptide Label: isoform X7
- UniProtKB: A6JCT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128890   ⟸   XM_063272820
- Peptide Label: isoform X3
- UniProtKB: A6JCT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128892   ⟸   XM_063272822
- Peptide Label: isoform X5
- UniProtKB: A6JCT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128891   ⟸   XM_063272821
- Peptide Label: isoform X4
- UniProtKB: A6JCT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128896   ⟸   XM_063272826
- Peptide Label: isoform X8
- UniProtKB: A6JCT5 (UniProtKB/TrEMBL),   A0A8I5ZV15 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128888   ⟸   XM_063272818
- Peptide Label: isoform X1
- UniProtKB: A6JCT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128895   ⟸   XM_063272825
- Peptide Label: isoform X7
- UniProtKB: A6JCT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128897   ⟸   XM_063272827
- Peptide Label: isoform X9
- UniProtKB: A6JCT5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128894   ⟸   XM_063272824
- Peptide Label: isoform X7
- UniProtKB: A6JCT4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128889   ⟸   XM_063272819
- Peptide Label: isoform X1
- UniProtKB: A6JCT7 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z173-F1-model_v2 AlphaFold Q9Z173 1-1550 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620836 AgrOrtholog
BioCyc Gene G2FUF-16030 BioCyc
Ensembl Genes ENSRNOG00000030149 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00055016072 UniProtKB/Swiss-Prot
  ENSRNOG00060012994 UniProtKB/Swiss-Prot
  ENSRNOG00065005299 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000044659.6 UniProtKB/TrEMBL
  ENSRNOT00000048175.7 UniProtKB/TrEMBL
  ENSRNOT00000059942.6 UniProtKB/TrEMBL
  ENSRNOT00000100277 ENTREZGENE
  ENSRNOT00000100277.1 UniProtKB/TrEMBL
  ENSRNOT00000103416.1 UniProtKB/TrEMBL
  ENSRNOT00000106702.1 UniProtKB/TrEMBL
  ENSRNOT00000112088.1 UniProtKB/TrEMBL
  ENSRNOT00000112583.1 UniProtKB/TrEMBL
  ENSRNOT00000112920.1 UniProtKB/TrEMBL
  ENSRNOT00055027376 UniProtKB/Swiss-Prot
  ENSRNOT00060022218 UniProtKB/Swiss-Prot
  ENSRNOT00065007861 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.40.610 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.120.740 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.220.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  4.10.1240.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GAIN_dom_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GAIN_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracell_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracellular_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_latrophilin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_latrophilin_rcpt_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lectin_gal-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lectin_gal-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Olfac-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:170641 UniProtKB/Swiss-Prot
NCBI Gene 170641 ENTREZGENE
PANTHER ADHESION G-PROTEIN COUPLED RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12011:SF60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Gal_Lectin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Latrophilin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OLF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Adgrl3 PhenoGen
PRINTS GPCRSECRETIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LATROPHILIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OLF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SUEL_LECTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000030149 RatGTEx
  ENSRNOG00055016072 RatGTEx
  ENSRNOG00060012994 RatGTEx
  ENSRNOG00065005299 RatGTEx
SMART GPS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HormR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OLF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5XV01_RAT UniProtKB/TrEMBL
  A0A8I5ZNG3_RAT UniProtKB/TrEMBL
  A0A8I5ZV15 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZWD6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AHH3_RAT UniProtKB/TrEMBL
  A0A8I6GLK1 ENTREZGENE, UniProtKB/TrEMBL
  A6JCT4 ENTREZGENE, UniProtKB/TrEMBL
  A6JCT5 ENTREZGENE, UniProtKB/TrEMBL
  A6JCT7 ENTREZGENE, UniProtKB/TrEMBL
  A6JCT8_RAT UniProtKB/TrEMBL
  A6JCT9_RAT UniProtKB/TrEMBL
  A6JCU0 ENTREZGENE, UniProtKB/TrEMBL
  A6JCU1_RAT UniProtKB/TrEMBL
  AGRL3_RAT UniProtKB/Swiss-Prot
  D3ZH59_RAT UniProtKB/TrEMBL
  D4AAL4 ENTREZGENE, UniProtKB/TrEMBL
  F1LRG7 ENTREZGENE, UniProtKB/TrEMBL
  O88924 ENTREZGENE
  O88925 ENTREZGENE
  O88926 ENTREZGENE
  O88927 ENTREZGENE
  O88928 ENTREZGENE
  O88929 ENTREZGENE
  Q4LDM4 ENTREZGENE
  Q4LDM5 ENTREZGENE
  Q4LDM6 ENTREZGENE
  Q4LDM7 ENTREZGENE
  Q4LDM8 ENTREZGENE
  Q9Z173 ENTREZGENE
UniProt Secondary O88924 UniProtKB/Swiss-Prot
  O88925 UniProtKB/Swiss-Prot
  O88926 UniProtKB/Swiss-Prot
  O88927 UniProtKB/Swiss-Prot
  O88928 UniProtKB/Swiss-Prot
  O88929 UniProtKB/Swiss-Prot
  Q4LDM4 UniProtKB/Swiss-Prot
  Q4LDM5 UniProtKB/Swiss-Prot
  Q4LDM6 UniProtKB/Swiss-Prot
  Q4LDM7 UniProtKB/Swiss-Prot
  Q4LDM8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Lphn3  latrophilin 3    calcium-independent alpha-latrotoxin receptor homolog 3  Name updated 1299863 APPROVED
2004-09-10 Lphn3  calcium-independent alpha-latrotoxin receptor homolog 3  Cirl3    Symbol and Name updated 1299863 APPROVED
2002-08-07 Cirl3  calcium-independent alpha-latrotoxin receptor homolog 3      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression predominantly expressed in brain 632388