Gene: Podxl (podocalyxin-like) Rattus norvegicus
Analyze
Symbol: Podxl
Name: podocalyxin-like
Description: INVOLVED IN glomerular visceral epithelial cell development; negative regulation of cell adhesion; cell migration (ortholog); ASSOCIATED WITH autosomal recessive juvenile Parkinson's disease 2 (ortholog); carotid artery disease (ortholog); Hemorrhage (ortholog); FOUND IN apical plasma membrane; cell body; slit diaphragm; INTERACTS WITH 17alpha-ethynylestradiol; 2,2,2-tetramine; 3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: PC; PCLP-1; podocalyxin; podocalyxin-like protein 1
Orthologs:
Homo sapiens (human) : PODXL (podocalyxin like)  HGNC  Alliance
Mus musculus (house mouse) : Podxl (podocalyxin-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Podxl (podocalyxin like)
Pan paniscus (bonobo/pygmy chimpanzee) : PODXL (podocalyxin like)
Canis lupus familiaris (dog) : PODXL (podocalyxin like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Podxl (podocalyxin like)
Sus scrofa (pig) : PODXL (podocalyxin like)
more info ...
Allele / Splice: Podxlm1Mcwi  
Genetic Models: SS-Podxlm1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0458,829,049 - 58,893,353 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0458,581,513 - 58,645,671 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4458,611,904 - 58,658,598 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1458,888,035 - 58,934,728 (-)NCBI
Celera455,224,910 - 55,271,542 (-)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Podxl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621878
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE