Adgrb3 (adhesion G protein-coupled receptor B3) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Adgrb3 (adhesion G protein-coupled receptor B3) Rattus norvegicus
Analyze
Symbol: Adgrb3
Name: adhesion G protein-coupled receptor B3
RGD ID: 1309703
Description: Predicted to enable G protein-coupled receptor activity and GTPase activator activity. Predicted to be involved in several processes, including myoblast fusion; neuron remodeling; and regulation of synapse organization. Predicted to act upstream of or within maintenance of synapse structure; motor learning; and positive regulation of synapse assembly. Predicted to be located in plasma membrane. Predicted to be active in cerebellar climbing fiber to Purkinje cell synapse; postsynaptic density membrane; and synaptic cleft. Orthologous to human ADGRB3 (adhesion G protein-coupled receptor B3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Bai3; brain-specific angiogenesis inhibitor 3; LOC301309
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2927,421,168 - 28,148,979 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl927,421,168 - 28,148,855 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx935,938,752 - 36,662,915 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0941,052,747 - 41,779,167 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0939,366,779 - 40,090,913 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0931,280,623 - 32,022,535 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl931,281,316 - 32,019,205 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0930,095,583 - 30,833,059 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4923,759,340 - 24,495,409 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1923,760,837 - 24,496,680 (-)NCBI
Celera924,954,095 - 25,681,415 (-)NCBICelera
Cytogenetic Map9q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21262840   PMID:22871113   PMID:23628982   PMID:24567399   PMID:24613359   PMID:25611509  


Genomics

Comparative Map Data
Adgrb3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2927,421,168 - 28,148,979 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl927,421,168 - 28,148,855 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx935,938,752 - 36,662,915 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0941,052,747 - 41,779,167 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0939,366,779 - 40,090,913 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0931,280,623 - 32,022,535 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl931,281,316 - 32,019,205 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0930,095,583 - 30,833,059 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4923,759,340 - 24,495,409 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1923,760,837 - 24,496,680 (-)NCBI
Celera924,954,095 - 25,681,415 (-)NCBICelera
Cytogenetic Map9q21NCBI
ADGRB3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38668,635,282 - 69,389,506 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl668,635,282 - 69,390,571 (+)EnsemblGRCh38hg38GRCh38
GRCh37669,345,174 - 70,099,398 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36669,402,353 - 70,156,124 (+)NCBINCBI36Build 36hg18NCBI36
Build 34669,404,157 - 70,156,120NCBI
Celera669,732,521 - 70,486,170 (+)NCBICelera
Cytogenetic Map6q12-q13NCBI
HuRef666,533,139 - 67,288,476 (+)NCBIHuRef
CHM1_1669,511,896 - 70,265,714 (+)NCBICHM1_1
T2T-CHM13v2.0669,812,849 - 70,568,164 (+)NCBIT2T-CHM13v2.0
Adgrb3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39125,106,557 - 25,869,338 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl125,106,557 - 25,868,788 (-)EnsemblGRCm39 Ensembl
GRCm38125,067,476 - 25,834,772 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl125,067,476 - 25,829,707 (-)EnsemblGRCm38mm10GRCm38
MGSCv37125,124,321 - 25,886,552 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36125,012,096 - 25,774,253 (-)NCBIMGSCv36mm8
Celera124,897,174 - 25,644,393 (-)NCBICelera
Cytogenetic Map1A5NCBI
cM Map110.39NCBI
Adgrb3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554883,806,695 - 4,508,421 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554883,803,859 - 4,509,043 (+)NCBIChiLan1.0ChiLan1.0
ADGRB3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1686,576,148 - 87,326,609 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0666,484,739 - 67,238,607 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1669,785,260 - 70,537,440 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl669,788,604 - 70,536,820 (+)Ensemblpanpan1.1panPan2
ADGRB3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11231,336,791 - 32,056,238 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1231,340,176 - 32,054,228 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1231,196,863 - 31,913,751 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01231,888,025 - 32,595,925 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1231,888,029 - 32,595,922 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11231,395,758 - 32,103,918 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01231,449,609 - 32,156,711 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01231,564,774 - 32,276,003 (+)NCBIUU_Cfam_GSD_1.0
Adgrb3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494666,625,989 - 67,296,544 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936618786,816 - 1,455,747 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936618783,363 - 1,453,620 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADGRB3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl148,886,491 - 49,619,769 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1148,885,885 - 49,619,783 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2155,579,281 - 55,774,193 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ADGRB3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1175,543,587 - 6,287,255 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl175,543,556 - 6,000,742 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605811,579,590 - 12,426,876 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adgrb3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475326,287,621 - 26,980,325 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475326,284,931 - 26,980,937 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Adgrb3
5464 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:34
Count of miRNA genes:30
Interacting mature miRNAs:32
Transcripts:ENSRNOT00000016194
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat
724543Cm20Cardiac mass QTL 203.9heart mass (VT:0007028)calculated heart weight (CMO:0000073)91696139840594091Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
1598823Memor16Memory QTL 161.9exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)92213332249968732Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)92375402458157242Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)92746863972468639Rat

Markers in Region
D9Rat158  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,532,063 - 27,532,335 (+)MAPPERmRatBN7.2
Rnor_6.0931,391,224 - 31,391,495NCBIRnor6.0
Rnor_5.0930,206,184 - 30,206,455UniSTSRnor5.0
RGSC_v3.4923,881,721 - 23,881,993RGDRGSC3.4
RGSC_v3.4923,881,722 - 23,881,993UniSTSRGSC3.4
RGSC_v3.1923,883,135 - 23,883,407RGD
Celera925,064,937 - 25,065,208UniSTS
SHRSP x BN Map927.9198UniSTS
SHRSP x BN Map927.9198RGD
Cytogenetic Map9q13UniSTS
D9Got243  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2928,034,473 - 28,034,586 (+)MAPPERmRatBN7.2
Rnor_6.0931,905,953 - 31,906,065NCBIRnor6.0
Rnor_5.0930,717,381 - 30,717,493UniSTSRnor5.0
RGSC_v3.4924,375,652 - 24,375,764UniSTSRGSC3.4
Celera925,566,644 - 25,566,756UniSTS
Cytogenetic Map9q13UniSTS
RH137778  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,671,244 - 27,671,392 (+)MAPPERmRatBN7.2
Rnor_6.0931,529,014 - 31,529,161NCBIRnor6.0
Rnor_5.0930,344,209 - 30,344,356UniSTSRnor5.0
RGSC_v3.4924,022,738 - 24,022,885UniSTSRGSC3.4
Celera925,203,061 - 25,203,208UniSTS
RH 3.4 Map9247.09UniSTS
Cytogenetic Map9q13UniSTS
BE097545  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,830,644 - 27,830,858 (+)MAPPERmRatBN7.2
Rnor_6.0931,696,885 - 31,697,098NCBIRnor6.0
Rnor_5.0930,509,473 - 30,509,686UniSTSRnor5.0
RGSC_v3.4924,184,142 - 24,184,355UniSTSRGSC3.4
Celera925,365,457 - 25,365,670UniSTS
RH 3.4 Map9247.4UniSTS
Cytogenetic Map9q13UniSTS
BF399142  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,430,246 - 27,430,442 (+)MAPPERmRatBN7.2
Rnor_6.0931,289,700 - 31,289,895NCBIRnor6.0
Rnor_5.0930,104,660 - 30,104,855UniSTSRnor5.0
RGSC_v3.4923,768,419 - 23,768,614UniSTSRGSC3.4
Celera924,963,158 - 24,963,353UniSTS
RH 3.4 Map9248.09UniSTS
Cytogenetic Map9q13UniSTS
BF405766  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,438,092 - 27,438,299 (+)MAPPERmRatBN7.2
Rnor_6.0931,297,544 - 31,297,750NCBIRnor6.0
Rnor_5.0930,112,504 - 30,112,710UniSTSRnor5.0
RGSC_v3.4923,776,263 - 23,776,469UniSTSRGSC3.4
Celera924,970,999 - 24,971,205UniSTS
RH 3.4 Map9247.0UniSTS
Cytogenetic Map9q13UniSTS
BE121311  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,437,972 - 27,438,174 (+)MAPPERmRatBN7.2
Rnor_6.0931,297,424 - 31,297,625NCBIRnor6.0
Rnor_5.0930,112,384 - 30,112,585UniSTSRnor5.0
RGSC_v3.4923,776,143 - 23,776,344UniSTSRGSC3.4
Celera924,970,879 - 24,971,080UniSTS
RH 3.4 Map9246.5UniSTS
Cytogenetic Map9q13UniSTS
RH137855  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2928,025,147 - 28,025,270 (+)MAPPERmRatBN7.2
Rnor_6.0931,896,213 - 31,896,335NCBIRnor6.0
Rnor_5.0930,707,641 - 30,707,763UniSTSRnor5.0
RGSC_v3.4924,366,325 - 24,366,447UniSTSRGSC3.4
Celera925,557,318 - 25,557,440UniSTS
RH 3.4 Map9246.7UniSTS
Cytogenetic Map9q13UniSTS
BE119751  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,436,452 - 27,436,602 (+)MAPPERmRatBN7.2
Rnor_6.0931,295,904 - 31,296,053NCBIRnor6.0
Rnor_5.0930,110,864 - 30,111,013UniSTSRnor5.0
RGSC_v3.4923,774,623 - 23,774,772UniSTSRGSC3.4
Celera924,969,360 - 24,969,509UniSTS
RH 3.4 Map9246.8UniSTS
Cytogenetic Map9q13UniSTS
AW531581  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,531,622 - 27,531,763 (+)MAPPERmRatBN7.2
Rnor_6.0931,390,783 - 31,390,923NCBIRnor6.0
Rnor_5.0930,205,743 - 30,205,883UniSTSRnor5.0
RGSC_v3.4923,881,281 - 23,881,421UniSTSRGSC3.4
Celera925,064,496 - 25,064,636UniSTS
RH 3.4 Map9246.8UniSTS
Cytogenetic Map9q13UniSTS
AU049030  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2927,545,742 - 27,545,996 (+)MAPPERmRatBN7.2
Rnor_6.0931,404,900 - 31,405,151NCBIRnor6.0
Rnor_5.0930,219,860 - 30,220,111UniSTSRnor5.0
RGSC_v3.4923,895,399 - 23,895,650UniSTSRGSC3.4
Celera925,078,616 - 25,078,867UniSTS
Cytogenetic Map9q13UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 64 2
Low 4 8 4 2 2 10 22 27 4 2
Below cutoff 3 29 29 21 15 21 6 7 2 10 4 6

Sequence


RefSeq Acc Id: ENSRNOT00000016194   ⟹   ENSRNOP00000016194
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl927,421,168 - 28,148,855 (-)Ensembl
Rnor_6.0 Ensembl931,281,316 - 32,019,205 (-)Ensembl
RefSeq Acc Id: NM_001106898   ⟹   NP_001100368
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2927,421,168 - 28,148,550 (-)NCBI
Rnor_6.0931,280,623 - 32,022,098 (-)NCBI
Rnor_5.0930,095,583 - 30,833,059 (-)NCBI
RGSC_v3.4923,759,340 - 24,495,409 (-)RGD
Celera924,954,095 - 25,681,415 (-)RGD
Sequence:
RefSeq Acc Id: XM_017596334   ⟹   XP_017451823
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2927,421,249 - 28,148,975 (-)NCBI
Rnor_6.0931,281,278 - 32,022,535 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039083195   ⟹   XP_038939123
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2927,421,249 - 28,148,979 (-)NCBI
RefSeq Acc Id: XM_039083196   ⟹   XP_038939124
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2927,421,249 - 28,148,975 (-)NCBI
RefSeq Acc Id: XM_039083197   ⟹   XP_038939125
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2927,421,249 - 27,896,258 (-)NCBI
RefSeq Acc Id: XM_039083198   ⟹   XP_038939126
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2927,421,249 - 28,145,005 (-)NCBI
RefSeq Acc Id: XM_039083199   ⟹   XP_038939127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2927,421,249 - 27,842,525 (-)NCBI
RefSeq Acc Id: NP_001100368   ⟸   NM_001106898
- UniProtKB: D4A831 (UniProtKB/TrEMBL),   A6JJC3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017451823   ⟸   XM_017596334
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSRNOP00000016194   ⟸   ENSRNOT00000016194
RefSeq Acc Id: XP_038939123   ⟸   XM_039083195
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038939124   ⟸   XM_039083196
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038939126   ⟸   XM_039083198
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038939125   ⟸   XM_039083197
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038939127   ⟸   XM_039083199
- Peptide Label: isoform X5
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A831-F1-model_v2 AlphaFold D4A831 1-1522 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309703 AgrOrtholog
BioCyc Gene G2FUF-27954 BioCyc
Ensembl Genes ENSRNOG00000012045 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000016194 ENTREZGENE
  ENSRNOT00000016194.5 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.610 UniProtKB/TrEMBL
  2.20.100.10 UniProtKB/TrEMBL
  2.60.220.50 UniProtKB/TrEMBL
  4.10.1240.10 UniProtKB/TrEMBL
  Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro AGRB_N UniProtKB/TrEMBL
  CUB_dom UniProtKB/TrEMBL
  GAIN_dom_N UniProtKB/TrEMBL
  GAIN_dom_sf UniProtKB/TrEMBL
  GPCR_2-like UniProtKB/TrEMBL
  GPCR_2_brain-spec_angio_inhib UniProtKB/TrEMBL
  GPCR_2_extracell_dom_sf UniProtKB/TrEMBL
  GPCR_2_extracellular_dom UniProtKB/TrEMBL
  GPCR_2_secretin-like UniProtKB/TrEMBL
  GPCR_2_secretin-like_CS UniProtKB/TrEMBL
  GPS_dom UniProtKB/TrEMBL
  Thrombospondin_1_rpt UniProtKB/TrEMBL
  TSP1_rpt_sf UniProtKB/TrEMBL
KEGG Report rno:301309 UniProtKB/TrEMBL
NCBI Gene 301309 ENTREZGENE
PANTHER ADHESION G PROTEIN-COUPLED RECEPTOR B3 UniProtKB/TrEMBL
  ADHESION G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_2 UniProtKB/TrEMBL
  AGRB_N UniProtKB/TrEMBL
  GAIN UniProtKB/TrEMBL
  GPS UniProtKB/TrEMBL
  HRM UniProtKB/TrEMBL
  TSP_1 UniProtKB/TrEMBL
PhenoGen Adgrb3 PhenoGen
PRINTS BAIPRECURSOR UniProtKB/TrEMBL
  GPCRSECRETIN UniProtKB/TrEMBL
PROSITE CUB UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_2 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_3 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_4 UniProtKB/TrEMBL
  GPS UniProtKB/TrEMBL
  TSP1 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012045 RatGTEx
SMART GPS UniProtKB/TrEMBL
  HormR UniProtKB/TrEMBL
  TSP1 UniProtKB/TrEMBL
Superfamily-SCOP TSP1 UniProtKB/TrEMBL
UniProt A6JJC3 ENTREZGENE, UniProtKB/TrEMBL
  D4A831 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-03-16 Adgrb3  adhesion G protein-coupled receptor B3  Bai3  brain-specific angiogenesis inhibitor 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Bai3  brain-specific angiogenesis inhibitor 3   Bai3_predicted  brain-specific angiogenesis inhibitor 3 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Bai3_predicted  brain-specific angiogenesis inhibitor 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED