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Gene: Caprin1 (cell cycle associated protein 1) Rattus norvegicus
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Symbol: Caprin1
Name: cell cycle associated protein 1
Description: Exhibits RNA binding activity. Involved in negative regulation of translation. Localizes to the cytoplasmic ribonucleoprotein granule; glutamatergic synapse; and postsynapse. Orthologous to human CAPRIN1 (cell cycle associated protein 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,4-dibromophenyl 2,4,5-tribromophenyl ether; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: caprin-1; cytoplasmic activation- and proliferation-associated protein 1; glycosyl-phosphatidyl-inositol-anchored protein p137-like; GPI p137; GPI-anchored membrane protein 1; GPI-anchored protein p137; GPI-p137; Gpiap1; LOC362173; MGC124904; MGC125054; p137GPI; RNA granule protein 105; rng105
Orthologs:
Homo sapiens (human) : CAPRIN1 (cell cycle associated protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Caprin1 (cell cycle associated protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Caprin1 (cell cycle associated protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CAPRIN1 (cell cycle associated protein 1)
Canis lupus familiaris (dog) : CAPRIN1 (cell cycle associated protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Caprin1 (cell cycle associated protein 1)
Sus scrofa (pig) : CAPRIN1 (cell cycle associated protein 1)
more info ...
Related Pseudogenes: LOC678703  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0393,701,830 - 93,789,580 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03100,342,429 - 100,430,355 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4389,062,097 - 89,093,093 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1388,958,538 - 88,988,864 (-)NCBI
Celera389,222,579 - 89,254,302 (-)NCBICelera
Cytogenetic Map3q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Caprin1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305707
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.