Septin11 (septin 11) - Rat Genome Database

Name: Septin11
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Septin11 (septin 11) Rattus norvegicus

Analyze

Symbol:

Septin11

Name:

septin 11

RGD ID:

1307405

Description:

Predicted to have GTPase activity and molecular adaptor activity. Predicted to be involved in cellular protein localization and cytoskeleton-dependent cytokinesis. Localizes to glutamatergic synapse and postsynapse. Orthologous to human SEPTIN11 (septin 11); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dibromophenyl 2,4,5-tribromophenyl ether.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

LOC305227; Sept11; Sept6; septin 6; septin-11

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SEPTIN11 (septin 11)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Septin11 (septin 11)	HGNC	Treefam, EggNOG, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Septin11 (septin 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SEPTIN11 (septin 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SEPTIN11 (septin 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Septin11 (septin 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SEPTIN11 (septin 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	SEPTIN11 (septin 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Septin11 (septin 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SEPTIN6 (septin 6)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	SEPTIN11 (septin 11)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Mus musculus (house mouse):	Septin11 (septin 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Drosophila melanogaster (fruit fly):	Sep2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Drosophila melanogaster (fruit fly):	Sep5	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Caenorhabditis elegans (roundworm):	unc-61	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	14	16,369,544 - 16,405,645 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	16,369,544 - 16,452,998 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	16,295,536 - 16,331,637 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	16,465,348 - 16,501,284 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	14	16,464,587 - 16,550,314 (-)	NCBI
Celera	14	14,310,209 - 14,346,008 (-)	NCBI		Celera
Cytogenetic Map	14	p22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

methylmalonic acidemia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (EXP)

3-chloropropane-1,2-diol (EXP)

4-(ethoxymethylene)-2-phenyloxazol-5-one (ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP,ISO)

bucladesine (ISO)

carbon nanotube (ISO)

chrysene (ISO)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

enzyme inhibitor (ISO)

eugenol (ISO)

glafenine (EXP)

hyaluronic acid (EXP)

hydrogen peroxide (EXP)

isotretinoin (ISO)

medroxyprogesterone acetate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

microcystin (EXP)

microcystin RR (ISO)

nickel sulfate (ISO)

paracetamol (ISO)

phenylmercury acetate (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenite (EXP)

sunitinib (ISO)

tamibarotene (ISO)

testosterone (ISO)

tetrachloromethane (EXP)

tetrahydropalmatine (ISO)

tetraphene (ISO)

torcetrapib (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zinc sulfate (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular protein localization (IBA)

cytoskeleton-dependent cytokinesis (IBA)

regulation of synapse organization (IDA,IMP)

Cellular Component

axon (IEA)

cell division site (IBA)

cytoskeleton (IEA)

dendritic spine (IEA)

GABA-ergic synapse (IDA,IMP)

glutamatergic synapse (IDA)

microtubule cytoskeleton (IBA)

postsynapse (IDA)

postsynaptic specialization of symmetric synapse (IDA)

septin complex (IBA,ISO,ISS)

septin ring (IBA)

stress fiber (ISO)

Molecular Function

GTP binding (IEA)

GTPase activity (IBA)

molecular adaptor activity (IBA)

protein binding (ISO)

References

References - curated


1.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA data from the GO Consortium
3.	Li X, etal., J Biol Chem. 2009 Jun 19;284(25):17253-65. doi: 10.1074/jbc.M109.008870. Epub 2009 Apr 20.
4.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15485874	PMID:16854843	PMID:17546647	PMID:18809578	PMID:22871113	PMID:23376485	PMID:29476059

Genomics

Comparative Map Data

Septin11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	14	16,369,544 - 16,405,645 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	16,369,544 - 16,452,998 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	16,295,536 - 16,331,637 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	16,465,348 - 16,501,284 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	14	16,464,587 - 16,550,314 (-)	NCBI
Celera	14	14,310,209 - 14,346,008 (-)	NCBI		Celera
Cytogenetic Map	14	p22	NCBI

SEPTIN11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	4	76,949,703 - 77,040,384 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38.p13 Ensembl	4	76,949,751 - 77,040,384 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	4	76,949,752 - 77,040,154 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	4	77,870,895 - 77,961,307 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	78,089,919 - 78,178,792 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	4	78,228,073 - 78,316,946	NCBI
Celera	4	75,172,269 - 75,261,155 (+)	NCBI
Cytogenetic Map	4	q21.1	NCBI
HuRef	4	73,622,723 - 73,711,589 (+)	NCBI		HuRef
CHM1_1	4	77,848,111 - 77,937,022 (+)	NCBI		CHM1_1

Septin11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	93,227,445 - 93,329,237 (+)	NCBI	GRCm39		mm39
GRCm38	5	93,090,995 - 93,182,368 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	93,093,437 - 93,176,447 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	93,522,483 - 93,603,984 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	5	94,168,661 - 94,250,162 (+)	NCBI			mm8
Celera	5	91,247,357 - 91,328,543 (+)	NCBI		Celera
Cytogenetic Map	5	E2	NCBI
cM Map	5	47.29	NCBI

Septin11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955433	1,606,261 - 1,691,812 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955433	1,606,246 - 1,691,819 (+)	NCBI	ChiLan1.0	ChiLan1.0

SEPTIN11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	4	53,004,755 - 53,095,427 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	53,006,294 - 53,095,844 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	4	47,165,381 - 47,255,954 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

SEPTIN11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	32	1,475,748 - 1,607,107 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	32	1,553,208 - 1,608,132 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Septin11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936676	852,115 - 944,387 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SEPTIN11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	72,543,620 - 72,679,173 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	72,543,641 - 72,679,173 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	76,788,927 - 76,879,982 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SEPTIN11
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	25,449,480 - 25,541,029 (+)	NCBI
ChlSab1.1 Ensembl	7	25,448,672 - 25,535,055 (+)	Ensembl

Septin11
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624757	13,932,153 - 14,039,741 (-)	NCBI

Position Markers

AW548875

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	14	16,371,189 - 16,371,292	NCBI	Rnor6.0
Rnor_5.0	14	16,297,181 - 16,297,284	UniSTS	Rnor5.0
RGSC_v3.4	14	16,466,993 - 16,467,096	UniSTS	RGSC3.4
Celera	14	14,311,854 - 14,311,957	UniSTS
Cytogenetic Map	14	p22	UniSTS

RH136848

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	14	16,370,777 - 16,370,979	NCBI	Rnor6.0
Rnor_5.0	14	16,296,769 - 16,296,971	UniSTS	Rnor5.0
RGSC_v3.4	14	16,466,581 - 16,466,783	UniSTS	RGSC3.4
Celera	14	14,311,442 - 14,311,644	UniSTS
Cytogenetic Map	14	p22	UniSTS
RH 3.4 Map	14	163.6	UniSTS

RH138671

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	14	16,368,973 - 16,369,149	NCBI	Rnor6.0
Rnor_5.0	14	16,294,965 - 16,295,141	UniSTS	Rnor5.0
RGSC_v3.4	14	16,464,777 - 16,464,953	UniSTS	RGSC3.4
Celera	14	14,309,638 - 14,309,814	UniSTS
Cytogenetic Map	14	p22	UniSTS
RH 3.4 Map	14	165.2	UniSTS

RH139145

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	14	16,371,194 - 16,371,360	NCBI	Rnor6.0
Rnor_5.0	14	16,297,186 - 16,297,352	UniSTS	Rnor5.0
RGSC_v3.4	14	16,466,998 - 16,467,164	UniSTS	RGSC3.4
Celera	14	14,311,859 - 14,312,025	UniSTS
Cytogenetic Map	14	p22	UniSTS
RH 3.4 Map	14	177.4	UniSTS

UniSTS:235223

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	14	16,371,911 - 16,372,085	NCBI	Rnor6.0
Rnor_5.0	14	16,297,903 - 16,298,077	UniSTS	Rnor5.0
RGSC_v3.4	14	16,467,715 - 16,467,889	UniSTS	RGSC3.4
Celera	14	14,312,576 - 14,312,750	UniSTS
Cytogenetic Map	14	p22	UniSTS

QTLs in Region (Rnor_6.0)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300159	Bmd61	Bone mineral density QTL 61	5.3	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	14	1	27597761	Rat
2300183	Bmd60	Bone mineral density QTL 60	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	14	1	27597761	Rat
619619	Rf4	Renal disease susceptibility QTL 4	4.1	0.002	total urine protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	14	1	34403399	Rat
9589814	Gluco67	Glucose level QTL 67	4.54	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	41333960	Rat
7411573	Bw139	Body weight QTL 139	4.7	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	14	1	41333960	Rat
634352	Apr6	Acute phase response QTL 6	3.7		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	14	1	42766285	Rat
70204	Niddm20	Non-insulin dependent diabetes mellitus QTL 20	5.1	0.000008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	2227825	19230541	Rat
2293089	Iddm31	Insulin dependent diabetes mellitus QTL 31	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	4833233	19909932	Rat
2293089	Iddm31	Insulin dependent diabetes mellitus QTL 31	4.7		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	14	4833233	19909932	Rat
1300114	Srn2	Serum renin concentration QTL 2	3.27		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	14	4833233	23004027	Rat
70195	Mcs8	Mammary carcinoma susceptibility QTL 8	4.28		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	14	4833233	26466248	Rat
1331740	Bw26	Body weight QTL 26	3.028		body mass (VT:0001259)	body weight (CMO:0000012)	14	4833233	33040042	Rat
1581500	Renag1	Renal agenesis QTL 1			kidney development trait (VT:0000527)	percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)	14	9756435	72854397	Rat
1358296	Ael3	Aortic elastin QTL 3	3.7	0.00051	aorta elastin amount (VT:0003905)	aortic elastin	14	10539977	55539977	Rat
2302045	Pia39	Pristane induced arthritis QTL 39	4.9	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G2a level (CMO:0002116)	14	10539977	55539977	Rat
731183	Pia20	Pristane induced arthritis QTL 20	3.55		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	14	10729268	61873323	Rat
2302277	Gluco38	Glucose level QTL 38	5.8		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	12680424	30155192	Rat
631839	Niddm37	Non-insulin dependent diabetes mellitus QTL 37	3.37		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	14	12680424	106641756	Rat
631212	Bw5	Body weight QTL5	5.43		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	14	12680613	32593926	Rat
1300140	Srn3	Serum renin concentration QTL 3	3.19		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	14	16336988	33163485	Rat

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	106
Count of miRNA genes:	80
Interacting mature miRNAs:	96
Transcripts:	ENSRNOT00000067222
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	37	38	28	19	28	2	5	74	35	34	11	2
Low		6	19	13		13	6	6			7		6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AABR07014470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01078262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01078263	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC167769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474060	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EU711414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EU711415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EU711416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EU711417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000067222 ⟹ ENSRNOP00000062626

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	14	16,369,544 - 16,452,890 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000091577 ⟹ ENSRNOP00000069146

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	14	16,371,979 - 16,452,998 (-)	Ensembl

RefSeq Acc Id:

NM_001107208 ⟹ NP_001100678

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	14	16,369,544 - 16,405,645 (-)	NCBI
Rnor_5.0	14	16,295,536 - 16,331,637 (-)	NCBI
RGSC_v3.4	14	16,465,348 - 16,501,284 (-)	RGD
Celera	14	14,310,209 - 14,346,008 (-)	RGD

Sequence:

show sequence

ATGGCCGTGGCGGTGGGGAGACCGAGTAATGAAGAACTGCGAAACTTATCACTTTCTGGCCATG
TTGGATTTGACAGTCTCCCTGACCAGCTGGTCAACAAATCCACTTCTCAAGGATTCTGTTTCAA
CATCCTGTGTGTGGGAGAGACAGGTATTGGCAAATCCACATTGATGGACACTTTATTCAACACC
AAATTTGAAAGTGACCCAGCTACTCACAACGAACCAGGTGTCCGGTTAAAAGCCAGAAGTTACG
AACTGCAGGAAAGCAACGTACGGCTGAAGCTAACCATTGTTGACACAGTGGGATTTGGAGACCA
GATTAATAAAGACGACAGCTATAAGCCCATAGTGGAGTACATTGACGCCCAGTTTGAGGCCTAC
TTGCAAGAGGAATTGAAAATTAAGCGTTCTCTCTTCAACTACCACGACACGAGGATTCACGCCT
GCCTTTACTTTATCGCCCCCACGGGACATTCACTGAAGTCCCTGGACCTGGTCACCATGAAGAA
GCTGGACAGCAAGGTGAACATCATCCCAATCATTGCGAAAGCCGACACCATCGCCAAGAACGAA
TTGCACAAGTTCAAGAGTAAGATCATGAGTGAACTCGTGAGCAACGGAGTCCAGATATATCAGT
TCCCCACCGATGAGGAAACGGTGGCCGAGATTAATGCAACGATGAGTGTCCATCTCCCATTTGC
AGTGGTTGGCAGTACCGAAGAGGTGAAGATTGGCAACAAGATGGCGAAGGCCAGGCAGTACCCT
TGGGGTGTGGTGCAGGTTGAGAACGAAAACCACTGTGATTTTGTGAAGCTGAGGGAGATGCTGA
TCCGAGTGAACATGGAGGACCTGCGAGAGCAGACGCACACTCGCCACTACGAGTTGTATCGGCG
CTGTAAGCTCGAGGAGATGGGCTTCAAGGACACTGACCCTGACAGCAAGCCCTTCAGTCTCCAG
GAGACATATGAAGCAAAGAGGAATGAGTTCCTGGGAGAGCTGCAGAAGAAGGAGGAGGAGATGA
GACAGATGTTTGTCATGAGAGTGAAGGAGAAAGAGGCGGAGCTCAAGGAGGCGGAGAAAGAGCT
TCATGAGAAGTTTGACCTCCTGAAGCGGACTCACCAAGAGGAGAAGAAAAAGGTGGAAGACAAG
AAGAAGGAGCTTGAGGAGGAGGTGAGCAACTTCCAGAAGAAGAAGGCGGCGGCTCAGCTCTTGC
AGTCGCAGGCCCAGCAGTCTGGGGCCCAGCAGACCAAGAAGGACAAGGATAAGAAAAATAGTCC
CTGGCTCTGCACGGAATAAACGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCT
TCTTCTTTATGTAGCCATCACGTTGCCAAGCCCTACTCTCTCTTAATGGACAGCATTAGAAGAG
CGGGAGCTGTCTGTTCACGAGTTGGGGAAGAGTTACCTCATCTCCACCATCGCCTCCCATTCTT
TAAAGTCTGGGTCAAACATTGCACTGCTGTTTGTAATTGTCAATGTCTGTTTACAAACCACCAC
CCTCAGTGGCTACCGAAGTGACTTCAACTACCAAACAAAATAACAATAATATTAAGAGTGGAAT
AGAAAATGTAGGCCCAAACCTGGGGACTTGGGCTGGAATCCTCTTGCTTATTAGCTGCCATTTC
TTGAACCTCCTGATCTAAGACCTTATGGACCGAAGAGAGCATGTACCTCACTTGAGGTTGTCAT
CACCTGCAGGGCAAACATAGCACAAGGTACCCCCTGGTCTCTATCCTATGGGCAAATTTCACCA
ACCCCATCAGGATCTAAAGCTCTTAGCAGGTCATCAGAGCGGGGCAACCCTTGCTGCCTCCTAT
TGGTTTTGTGGGTTGTTCTGGTGTGGGATTTTAGAAAAGGAAAAAAAAAAAAAGAAAGGTATTG
CATGCACAGAGGTGCCTGCAGTTTTCCCTCTGGAACGTCCTATTGATACGGTGTTTTTATTTTT
CAGCTGACCATCTGCCTCTTGAGAGAAAGAAGTGGGCATCC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100678	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI67769	(Get FASTA)	NCBI Sequence Viewer
	ACE00321	(Get FASTA)	NCBI Sequence Viewer
	ACE00322	(Get FASTA)	NCBI Sequence Viewer
	ACE00323	(Get FASTA)	NCBI Sequence Viewer
	ACE00324	(Get FASTA)	NCBI Sequence Viewer
	B3GNI6	(Get FASTA)	NCBI Sequence Viewer
	EDL88655	(Get FASTA)	NCBI Sequence Viewer
	EDL88656	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001100678 ⟸ NM_001107208

- UniProtKB:

B3GNI6 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAVAVGRPSNEELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDTLFNT
KFESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEYIDAQFEAY
LQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTIAKNE
LHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGSTEEVKIGNKMAKARQYP
WGVVQVENENHCDFVKLREMLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQ
ETYEAKRNEFLGELQKKEEEMRQMFVMRVKEKEAELKEAEKELHEKFDLLKRTHQEEKKKVEDK
KKELEEEVSNFQKKKAAAQLLQSQAQQSGAQQTKKDKDKKNSPWLCTE

hide sequence

RefSeq Acc Id:

ENSRNOP00000062626 ⟸ ENSRNOT00000067222

RefSeq Acc Id:

ENSRNOP00000069146 ⟸ ENSRNOT00000091577

Protein Domains

Septin-type G

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Strain Variation

Strain Sequence Variants (Rnor 6.0)

ACI/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

ACI/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

ACI/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

BBDP/Wor (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

BN/SsN (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Buf/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

COP/CrCrl (MCW & UW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob) University of Wisconsin (Dr. James Shull)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Charles River Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob) and UW Madison (Dr. James Shull)

F344/NCrl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

F344/NRrrc (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

FHH/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHH/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

FHL/EurMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

FHL/EurMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

GH/OmrMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

GK/Ox (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LE/Stm (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/Crl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LEW/NCrlBR (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LH/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LL/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

LN/MavRrrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

M520/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

MHS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MNS/Gib (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

MR/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

SBH/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBH/Ygl sequenced by MCW

SBH/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SBN/Ygl (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	SBN/Ygl sequenced by MCW

SBN/Ygl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHR/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SHRSP/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SR/JrHsd (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Harlan Laboratories
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SR/JrHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/Jr (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

SS/JrHsdMcwi (MCW)

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Sequenced By:	Medical College of Wisconsin (Dr. Howard Jacob)
Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA v0.7.7 and GATK v3.2-2
Breeder:	Medical College of Wisconsin
Description:	Provided by the Medical College of Wisconsin (Dr. Howard Jacob)

SS/JrHsdMcwi (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WAG/Rij (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/Gcrc (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

WKY/NCrl (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WKY/NHsd (RGD)

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Platform:	Illumina HiSeq 2000
Secondary Analysis:	BWA mem 0.7.15, GATK v.3.6-0
Description:	Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD

WN/N (MCW)

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Sequenced By:	Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen) Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform:	SOLiD 4 and 5500
Secondary Analysis:	liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder:	National Institutes of Health
Description:	Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307405	AgrOrtholog
Ensembl Genes	ENSRNOG00000002182	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000062626	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOP00000069146	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000067222	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOT00000091577	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7456582	IMAGE-MGC_LOAD
InterPro	G_SEPTIN_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Septin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:305227	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:187546	IMAGE-MGC_LOAD
NCBI Gene	305227	ENTREZGENE
Pfam	Septin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Septin11	PhenoGen
PIRSF	Septin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	G_SEPTIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene	Rn.27798	ENTREZGENE
UniProt	A0A0G2JUL7_RAT	UniProtKB/TrEMBL
	B3GNI6	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	B3DMA8	UniProtKB/Swiss-Prot
	B3GNI4	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-08-05	Septin11	septin 11	Sept11	septin 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Sept11	septin 11	Sept6_predicted	septin 6 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Sept6_predicted	septin 6 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD