Gene: Cln3 (CLN3, battenin) Rattus norvegicus
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Symbol: Cln3
Name: CLN3, battenin
Description: ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); action potential (ortholog); amino acid transport (ortholog); ASSOCIATED WITH Disease Progression (ortholog); neuronal ceroid lipofuscinosis (ortholog); neuronal ceroid lipofuscinosis 3 (ortholog); FOUND IN endosome; Golgi apparatus; plasma membrane; INTERACTS WITH bisphenol A; dibutyl phthalate; endosulfan
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: battenin; ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease); ceroid-lipofuscinosis, neuronal 3; Cln3p; MGC94583
Orthologs:
Homo sapiens (human) : CLN3 (CLN3, battenin)  HGNC  Alliance
Mus musculus (house mouse) : Cln3 (ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cln3 (CLN3, battenin)
Canis lupus familiaris (dog) : CLN3 (CLN3, battenin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cln3 (CLN3, battenin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01197,986,384 - 197,999,726 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01204,965,144 - 204,978,485 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,713,096 - 185,724,375 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11185,862,977 - 185,874,256 (-)NCBI
Celera1178,814,090 - 178,825,369 (-)NCBICelera
Cytogenetic Map1q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cln3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359537
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2018-08-14
Status: ACTIVE