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Gene: Lrrc4b (leucine rich repeat containing 4B) Rattus norvegicus
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Symbol: Lrrc4b
Name: leucine rich repeat containing 4B
RGD ID: 1307121
Description: Predicted to have signaling receptor binding activity. Involved in regulation of presynapse assembly and synaptic membrane adhesion. Localizes to glutamatergic synapse and integral component of postsynaptic density membrane. Orthologous to human LRRC4B (leucine rich repeat containing 4B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bis(2-ethylhexyl) phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Leucine-rich repeat-containing protein 4B; LOC308571; Lrig4; netrin-G3 ligand; NGL-3
Orthologs:
Homo sapiens (human) : LRRC4B (leucine rich repeat containing 4B)  HGNC  Alliance
Mus musculus (house mouse) : Lrrc4b (leucine rich repeat containing 4B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lrrc4b (leucine rich repeat containing 4B)
Pan paniscus (bonobo/pygmy chimpanzee) : LRRC4B (leucine rich repeat containing 4B)
Canis lupus familiaris (dog) : LRRC4B (leucine rich repeat containing 4B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lrrc4b (leucine rich repeat containing 4B)
Sus scrofa (pig) : LRRC4B (leucine rich repeat containing 4B)
Chlorocebus sabaeus (African green monkey) : LRRC4B (leucine rich repeat containing 4B)
Heterocephalus glaber (naked mole-rat) : Lrrc4b (leucine rich repeat containing 4B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01100,434,418 - 100,468,914 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1100,447,998 - 100,468,868 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01101,500,129 - 101,534,301 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4194,920,886 - 94,940,636 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1194,998,996 - 95,018,701 (+)NCBI
Celera189,198,185 - 89,218,975 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lrrc4b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307121
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.