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ONTOLOGY REPORT - ANNOTATIONS


Term:regionalization
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Accession:GO:0003002 term browser browse the term
Definition:The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.
Synonyms:related_synonym: pattern formation



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regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155|MGI:1856158 (MGI:5662366|PMID:24528677), (MGI:892757|PMID:9169845) RGD PMID:9169845 PMID:24528677 MGI:5662366 MGI:892757 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Wnt8a Wnt family member 8A acts_upstream_of_or_within ISO (MGI:3609071|PMID:16256739) RGD PMID:16256739 MGI:3609071 NCBI chr18:26,137,690...26,143,283
Ensembl chr18:26,137,690...26,143,283
JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3716756 (MGI:3714080|PMID:17317769)
Ensembl
RGD
PMID:17317769 GO_REF:0000107 MGI:3714080 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurka aurora kinase A acts_upstream_of_or_within ISO MGI:3836420 (MGI:5449118|PMID:22939930) RGD PMID:22939930 MGI:5449118 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104903 (MGI:1889107|PMID:10964473)
Ensembl
RGD
PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Cdx1 caudal type homeo box 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:54,472,448...54,499,799
Ensembl chr18:54,473,444...54,490,814
JBrowse link
G Cdx2 caudal type homeo box 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Cdx4 caudal type homeo box 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO MGI:107405|MGI:98658 (MGI:3042338|PMID:15004567), (MGI:3776330|PMID:18241853) RGD PMID:15004567 PMID:18241853 MGI:3042338 MGI:3776330 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2148590 (MGI:1353237|PMID:10662781)
GO_REF:0000107
RGD
Ensembl
PMID:10662781 GO_REF:0000107 MGI:1353237 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in ISO (MGI:4821075|PMID:16434966) RGD PMID:16434966 MGI:4821075 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88180 (MGI:1889107|PMID:10964473)
Ensembl
RGD
PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr  X:131,868,983...132,236,837
Ensembl chr  X:131,868,990...132,236,798
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:1341884 (MGI:3530185|PMID:15680351) RGD PMID:15680351 MGI:3530185 NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:1341800 (MGI:3530185|PMID:15680351) RGD PMID:15680351 MGI:3530185 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:2449177 (MGI:2448170|PMID:12490556) RGD PMID:12490556 MGI:2448170 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Lefty1 left right determination factor 1 acts_upstream_of_or_within ISO MGI:1201414 (MGI:3042338|PMID:15004567) RGD PMID:15004567 MGI:3042338 NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2443342 (MGI:1346311|PMID:10529425)
UniProt
RGD
PMID:10529425 GO_REF:0000024 MGI:1346311 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within ISO MGI:1856621|MGI:99783 (MGI:1346311|PMID:10529425) RGD PMID:10529425 MGI:1346311 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
JBrowse link
G Rnf2 ring finger protein 2 acts_upstream_of_or_within ISO MGI:2447529 (MGI:2389282|PMID:12183370) RGD PMID:12183370 MGI:2389282 NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099
JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:3794506|PMID:18321982) RGD PMID:18321982 MGI:3794506 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:2176418|PMID:11731796) RGD PMID:11731796 MGI:2176418 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:3044914 (MGI:3044041|PMID:15155583) RGD PMID:15155583 MGI:3044041 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1201414 (MGI:3776330|PMID:18241853) RGD PMID:18241853 MGI:3776330 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISS
ISO
GO_REF:0000024
(MGI:4397730|PMID:19841259)
UniProt
RGD
PMID:19841259 GO_REF:0000024 MGI:4397730 NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298
JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902 (MGI:3771246|PMID:18028899) RGD PMID:18028899 MGI:3771246 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
JBrowse link
anterior/posterior axis specification, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3580390 (MGI:3580203|PMID:15870281) RGD PMID:15870281 MGI:3580203 NCBI chr 7:52,711,255...52,792,758
Ensembl chr 7:52,711,257...52,792,743
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA
(PMID:9054360)
GO_REF:0000107
RGD
Ensembl
PMID:9054360 GO_REF:0000107 NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Tasor transcription activation suppressor involved_in ISO (MGI:6109647|PMID:28839193) RGD PMID:28839193 MGI:6109647 NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:9207801)
UniProt
RGD
PMID:9207801 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO MGI:3044616 (MGI:3043490|PMID:14668413) RGD PMID:14668413 MGI:3043490 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1934206 (MGI:1303194|PMID:9790191) RGD PMID:9790191 MGI:1303194 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4835157|PMID:9054360) RGD PMID:9054360 MGI:4835157 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:87912 (MGI:1344152|PMID:10452853), (MGI:3689276|PMID:16991118)
Ensembl
RGD
PMID:10452853 PMID:16991118 GO_REF:0000107 MGI:1344152 MGI:3689276 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
JBrowse link
G Acvr2b activin A receptor type 2B involved_in
acts_upstream_of_or_within
ISO (PMID:9916847)
MGI:102806|MGI:1095407|MGI:1857709|MGI:98728 (MGI:1344152|PMID:10452853), (MGI:3525050|PMID:15542835), (MGI:3689276|PMID:16991118), (MGI:3695190|PMID:16845371), (MGI:894948|PMID:9242489)
RGD PMID:9242489 PMID:9916847 PMID:10452853 PMID:15542835 PMID:16845371 More... MGI:1344152 MGI:3525050 MGI:3689276 MGI:3695190 MGI:894948 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1096359|MGI:1857891|MGI:2180721|MGI:2679699 (MGI:3530707|PMID:15652703), (MGI:3578600|PMID:15872003), (MGI:3612223|PMID:16368932), (MGI:3703483|PMID:17067568) RGD PMID:15652703 PMID:15872003 PMID:16368932 PMID:17067568 MGI:3530707 MGI:3578600 MGI:3612223 MGI:3703483 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO MGI:108359 (MGI:1314705|PMID:9847249) RGD PMID:9847249 MGI:1314705 NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220
JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:104621|MGI:1857484 (MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249) RGD PMID:9374397 PMID:9847249 MGI:1098911 MGI:1314705 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260
JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:2449944 (MGI:2449253|PMID:12645927) RGD PMID:12645927 MGI:2449253 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Arc activity-regulated cytoskeleton-associated protein acts_upstream_of_or_within ISO MGI:2386454 (MGI:1355000|PMID:10727859) RGD PMID:10727859 MGI:1355000 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
JBrowse link
G Barx1 BARX homeobox 1 acts_upstream_of_or_within ISO MGI:3578634 (MGI:3766872|PMID:17855428) RGD PMID:17855428 MGI:3766872 NCBI chr17:15,990,412...15,993,887
Ensembl chr17:15,990,412...15,993,887
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158342 (MGI:3051920|PMID:15136140) RGD PMID:15136140 MGI:3051920 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within ISO MGI:2158503|MGI:87912 (MGI:1855789|PMID:10772805), (MGI:3525050|PMID:15542835) RGD PMID:10772805 PMID:15542835 MGI:1855789 MGI:3525050 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
JBrowse link
G Bptf bromodomain PHD finger transcription factor acts_upstream_of_or_within ISO MGI:3823037|MGI:3841299 (MGI:3821803|PMID:18794365), (MGI:3840601|PMID:18974875) RGD PMID:18794365 PMID:18974875 MGI:3821803 MGI:3840601 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO MGI:3525505 (MGI:3525050|PMID:15542835) RGD PMID:15542835 MGI:3525050 NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:4422144|PMID:19754878)
Ensembl
RGD
PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
JBrowse link
G Cdx1 caudal type homeo box 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154514|MGI:97858 (MGI:2154839|PMID:11784046), (MGI:77274|PMID:7585967)
Ensembl
RGD
PMID:7585967 PMID:11784046 GO_REF:0000107 MGI:2154839 MGI:77274 NCBI chr18:54,472,448...54,499,799
Ensembl chr18:54,473,444...54,490,814
JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:88362 (MGI:4398801|PMID:19853565) RGD PMID:19853565 MGI:4398801 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Cdx4 caudal type homeo box 4 acts_upstream_of_or_within ISO MGI:88361 (MGI:4398801|PMID:19853565) RGD PMID:19853565 MGI:4398801 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461
JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:2668337|MGI:4430218 (MGI:3835694|PMID:18849982), (MGI:4429791|PMID:19357712) RGD PMID:18849982 PMID:19357712 MGI:3835694 MGI:4429791 NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:1197794|PMID:9501024) RGD PMID:9501024 MGI:1197794 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:97451 (MGI:2136711|PMID:11412024)
RGD PMID:11412024 PMID:21873635 MGI:2136711, RGD:13792537 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:98493 (MGI:3614586|PMID:16399080) RGD PMID:16399080 MGI:3614586 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 acts_upstream_of_or_within ISO MGI:3045424 (MGI:3044441|PMID:15148409) RGD PMID:15148409 MGI:3044441 NCBI chr 5:159,961,961...160,010,942
Ensembl chr 5:159,961,928...160,010,939
JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 acts_upstream_of_or_within ISO MGI:2183292|MGI:2679699 (MGI:3703483|PMID:17067568) RGD PMID:17067568 MGI:3703483 NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204
JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 acts_upstream_of_or_within ISO MGI:1096359 (MGI:3703483|PMID:17067568) RGD PMID:17067568 MGI:3703483 NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:97490 (MGI:2386059|PMID:12196586), (MGI:3578670|PMID:15917450) RGD PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:99783 (MGI:1344734|PMID:10498685) RGD PMID:10498685 MGI:1344734 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO MGI:2387775 (MGI:1934969|PMID:11358868) RGD PMID:11358868 MGI:1934969 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:4346364 (MGI:4367921|PMID:19877275) RGD PMID:19877275 MGI:4367921 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530
JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO MGI:2449672|MGI:5544775 (MGI:1339513|PMID:10391213), (MGI:5509072|PMID:23918385) RGD PMID:10391213 PMID:23918385 MGI:1339513 MGI:5509072 NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95729 (MGI:5439039|PMID:22841643) RGD PMID:22841643 MGI:5439039 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:3798847|MGI:95728 (MGI:3053244|PMID:15315762), (MGI:5439039|PMID:22841643) RGD PMID:15315762 PMID:22841643 MGI:3053244 MGI:5439039 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Grsf1 G-rich RNA sequence binding factor 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) RGD PMID:15857914 MGI:3578569 NCBI chr14:19,412,944...19,429,364
Ensembl chr14:19,412,156...19,429,362
JBrowse link
G Helt helt bHLH transcription factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:45,991,227...45,993,045
Ensembl chr16:45,991,227...45,992,960
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes2 hes family bHLH transcription factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,667,190...162,668,235
Ensembl chr 5:162,667,190...162,668,235
JBrowse link
G Hes3 hes family bHLH transcription factor 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Hes6 hes family bHLH transcription factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:92,001,838...92,003,580
Ensembl chr 9:92,001,841...92,003,559
JBrowse link
G Hes7 hes family bHLH transcription factor 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:53,824,124...53,828,350
Ensembl chr10:53,825,574...53,828,097
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (MGI:3777521|PMID:16936074) RGD PMID:16936074 MGI:3777521 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1314872 (MGI:3619785|PMID:16537918)
Ensembl
RGD
PMID:16537918 GO_REF:0000107 MGI:3619785 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within ISO MGI:1314872 (MGI:3619785|PMID:16537918) RGD PMID:16537918 MGI:3619785 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2176174|MGI:2670936 (MGI:3578600|PMID:15872003)
GO_REF:0000107
RGD
Ensembl
PMID:15872003 GO_REF:0000107 MGI:3578600 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:3056069|MGI:96182 (MGI:1346308|PMID:10529420), (MGI:3055618|PMID:15367676) RGD PMID:10529420 PMID:15367676 MGI:1346308 MGI:3055618 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within ISO MGI:96192|MGI:96202 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96193|MGI:96203 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857626 (MGI:1098901|PMID:9367425)
GO_REF:0000107
RGD
Ensembl
PMID:9367425 GO_REF:0000107 MGI:1098901 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:96184|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:67616|PMID:7913519)
RGD PMID:7913519 PMID:9441667 PMID:21873635 MGI:1195045 MGI:67616, RGD:13792537 NCBI chr 4:81,269,243...81,313,218
Ensembl chr 4:81,269,243...81,313,218
JBrowse link
G Hoxa4 homeo box A4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2150391|MGI:96185|MGI:96208 (MGI:67413|PMID:7918106), (MGI:74948|PMID:7628700)
RGD PMID:7628700 PMID:7918106 PMID:21873635 MGI:67413 MGI:74948, RGD:13792537 NCBI chr 4:81,289,677...81,291,685
Ensembl chr 4:81,289,682...81,291,685
JBrowse link
G Hoxa5 homeo box A5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2150397|MGI:3723623|MGI:96186|MGI:96196 (MGI:1203259|PMID:9603431), (MGI:3720535|PMID:17626057), (MGI:3723390|PMID:17417799), (MGI:63693|PMID:7901120)
RGD PMID:7901120 PMID:9603431 PMID:17417799 PMID:17626057 PMID:21873635 MGI:1203259 MGI:3720535 MGI:3723390 MGI:63693, RGD:13792537 NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
JBrowse link
G Hoxa6 homeobox A6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2150392|MGI:96187|MGI:96197 (MGI:3720535|PMID:17626057), (MGI:67413|PMID:7918106)
RGD PMID:7918106 PMID:17626057 PMID:21873635 MGI:3720535 MGI:67413, RGD:13792537 NCBI chr 4:81,304,918...81,313,184
Ensembl chr 4:81,306,407...81,308,850
JBrowse link
G Hoxa7 homeobox A7 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
MGI:96188 (MGI:1313067|PMID:9784603)
Ensembl
RGD
PMID:9784603 PMID:21873635 GO_REF:0000107 MGI:1313067, RGD:13792537 NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659
JBrowse link
G Hoxa9 homeobox A9 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2150411|MGI:96190|MGI:96199|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797), (MGI:85243|PMID:9013929)
RGD PMID:8625797 PMID:9013929 PMID:17626057 PMID:21873635 MGI:3720535 MGI:78984 MGI:85243, RGD:13792537 NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358
JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96170|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1346308|PMID:10529420), (MGI:1859107|PMID:10885747) RGD PMID:10529420 PMID:10885747 MGI:1346308 MGI:1859107 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836
JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:2151772|MGI:96182|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:85074|PMID:9012503) RGD PMID:9012503 PMID:10885747 MGI:1859107 MGI:85074 NCBI chr10:81,317,927...81,320,223
Ensembl chr10:81,318,026...81,320,192
JBrowse link
G Hoxb3 homeo box B3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:96175|MGI:96182|MGI:96183|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:1859107|PMID:10885747)
RGD PMID:9441667 PMID:10885747 PMID:21873635 MGI:1195045 MGI:1859107, RGD:13792537 NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107
JBrowse link
G Hoxb4 homeo box B4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:96176|MGI:96183|MGI:96184|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:74948|PMID:7628700), (MGI:85074|PMID:9012503)
RGD PMID:7628700 PMID:9012503 PMID:10885747 PMID:21873635 MGI:1859107 MGI:74948 MGI:85074, RGD:13792537 NCBI chr10:81,284,552...81,287,134
Ensembl chr10:81,284,552...81,287,128
JBrowse link
G Hoxb5 homeo box B5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2151484|MGI:96177|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96196 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847)
RGD PMID:7828847 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:70296, RGD:13792537 NCBI chr10:81,269,372...81,271,580
Ensembl chr10:81,269,372...81,271,580
JBrowse link
G Hoxb6 homeo box B6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2151485|MGI:96178|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96188|MGI:96189|MGI:96190|MGI:96197 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847)
RGD PMID:7828847 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:70296, RGD:13792537 NCBI chr10:81,258,726...81,267,458
Ensembl chr10:81,265,056...81,267,449
JBrowse link
G Hoxb7 homeo box B7 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2150401|MGI:96179|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96189|MGI:96190 (MGI:1313067|PMID:9784603), (MGI:1859107|PMID:10885747)
RGD PMID:9784603 PMID:10885747 PMID:21873635 MGI:1313067 MGI:1859107, RGD:13792537 NCBI chr10:81,252,616...81,256,034
Ensembl chr10:81,252,553...81,256,034
JBrowse link
G Hoxb8 homeo box B8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1934178|MGI:2683089|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96190|MGI:96198|MGI:96209 (MGI:1349283|PMID:10559485), (MGI:1859107|PMID:10885747), (MGI:1933164|PMID:11311170), (MGI:2681074|PMID:14623233)
Ensembl
RGD
PMID:10559485 PMID:10885747 PMID:11311170 PMID:14623233 GO_REF:0000107 MGI:1349283 MGI:1859107 MGI:1933164 MGI:2681074 NCBI chr10:81,248,313...81,251,261
Ensembl chr10:81,248,887...81,250,638
JBrowse link
G Hoxb9 homeo box B9 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2150429|MGI:96180|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96199|MGI:96210 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:85243|PMID:9013929)
RGD PMID:9013929 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:85243, RGD:13792537 NCBI chr10:81,237,312...81,240,818
Ensembl chr10:81,237,312...81,240,818
JBrowse link
G Hoxc10 homeo box C10 acts_upstream_of_or_within ISO MGI:96171|MGI:96202 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 7:134,103,741...134,108,966
Ensembl chr 7:134,103,643...134,108,966
JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO MGI:96172|MGI:96203 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 7:134,091,224...134,094,738
Ensembl chr 7:134,091,552...134,094,738
JBrowse link
G Hoxc13 homeobox C13 acts_upstream_of_or_within ISO MGI:1926422 (MGI:1195385|PMID:9420327) RGD PMID:9420327 MGI:1195385 NCBI chr 7:134,058,640...134,065,479
Ensembl chr 7:134,058,640...134,064,800
JBrowse link
G Hoxc4 homeo box C4 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
MGI:1857570|MGI:2150683 (MGI:79121|PMID:8626021), (MGI:81673|PMID:8660891)
Ensembl
RGD
PMID:8626021 PMID:8660891 PMID:21873635 GO_REF:0000107 MGI:79121 MGI:81673, RGD:13792537 NCBI chr 7:134,135,279...134,173,133
Ensembl chr 7:134,170,591...134,173,133
JBrowse link
G Hoxc5 homeo box C5 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:96177|MGI:96186 (MGI:3720535|PMID:17626057)
PMID:21873635
RGD PMID:17626057 PMID:21873635 MGI:3720535, RGD:13792537 NCBI chr 7:134,150,988...134,154,410
Ensembl chr 7:134,150,988...134,154,410
JBrowse link
G Hoxc6 homeo box C6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:96178|MGI:96187 (MGI:3720535|PMID:17626057)
RGD PMID:17626057 PMID:21873635 MGI:3720535, RGD:13792537 NCBI chr 7:134,138,017...134,148,899
Ensembl chr 7:134,135,502...134,148,392
JBrowse link
G Hoxc8 homeobox C8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2149030|MGI:96189|MGI:96209 (MGI:1933164|PMID:11311170)
Ensembl
RGD
PMID:11311170 GO_REF:0000107 MGI:1933164 NCBI chr 7:134,127,937...134,130,503
Ensembl chr 7:134,127,913...134,130,503
JBrowse link
G Hoxc9 homeobox C9 acts_upstream_of_or_within ISO MGI:2150685|MGI:96180|MGI:96190|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:73980|PMID:7547473) RGD PMID:7547473 PMID:17626057 MGI:3720535 MGI:73980 NCBI chr 7:134,118,817...134,121,497
Ensembl chr 7:134,118,817...134,121,492
JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO MGI:96171|MGI:96192|MGI:96210 (MGI:1350864|PMID:10642795), (MGI:2667742|PMID:12869760) RGD PMID:10642795 PMID:12869760 MGI:1350864 MGI:2667742 NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172|MGI:96193 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO MGI:1857871 (MGI:63627|PMID:8106170) RGD PMID:8106170 MGI:63627 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963
JBrowse link
G Hoxd3 homeo box D3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:1857959|MGI:96175|MGI:96184 (MGI:1195045|PMID:9441667), (MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519)
GO_REF:0000107
RGD
Ensembl
PMID:7910549 PMID:7913519 PMID:9441667 PMID:21873635 GO_REF:0000107 MGI:1195045 MGI:63793 MGI:67616, RGD:13792537 NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282
JBrowse link
G Hoxd4 homeo box D4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2151488|MGI:96176 (MGI:72992|PMID:7750651), (MGI:74948|PMID:7628700)
RGD PMID:7628700 PMID:7750651 PMID:21873635 MGI:72992 MGI:74948, RGD:13792537 NCBI chr 3:59,614,464...59,634,042
Ensembl chr 3:59,614,464...59,631,528
JBrowse link
G Hoxd8 homeobox D8 acts_upstream_of_or_within ISO MGI:2151815|MGI:96189|MGI:96198 (MGI:1933164|PMID:11311170) RGD PMID:11311170 MGI:1933164 NCBI chr 3:59,607,864...59,610,358
Ensembl chr 3:59,607,996...59,610,361
JBrowse link
G Hoxd9 homeo box D9 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:2150414|MGI:96180|MGI:96190|MGI:96199|MGI:96202 (MGI:1350864|PMID:10642795), (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797)
GO_REF:0000107
RGD
Ensembl
PMID:8625797 PMID:10642795 PMID:17626057 PMID:21873635 GO_REF:0000107 MGI:1350864 MGI:3720535 MGI:78984, RGD:13792537 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1857180 (MGI:3609520|PMID:16109169) RGD PMID:16109169 MGI:3609520 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) RGD PMID:15857914 MGI:3578569 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527|MGI:3027342 (MGI:2660994|PMID:12701101), (MGI:3579954|PMID:15930098) RGD PMID:12701101 PMID:15930098 MGI:2660994 MGI:3579954 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:1861960 (MGI:1336552|PMID:10220415) RGD PMID:10220415 MGI:1336552 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO MGI:1932339 (MGI:3530206|PMID:15741318), (MGI:3625774|PMID:16618927) RGD PMID:15741318 PMID:16618927 MGI:3530206 MGI:3625774 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1347476 (MGI:1344734|PMID:10498685)
UniProt
RGD
PMID:10498685 GO_REF:0000024 MGI:1344734 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G LOC100911668 homeobox protein Hox-A10-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:81,331,591...81,341,241
Ensembl chr 4:81,331,591...81,340,919
JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1298218 (MGI:3045836|PMID:15142971)
RGD PMID:15142971 PMID:21873635 MGI:3045836, RGD:13792537 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1278315|MGI:1861309|MGI:2156191 (MGI:3045836|PMID:15142971), (MGI:3603992|PMID:16126904), (MGI:4413372|PMID:19795512) RGD PMID:15142971 PMID:16126904 PMID:19795512 MGI:3045836 MGI:3603992 MGI:4413372 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Mllt3 MLLT3, super elongation complex subunit acts_upstream_of_or_within ISO MGI:2388982 (MGI:2387913|PMID:12242306) RGD PMID:12242306 MGI:2387913 NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (MGI:4948979|PMID:21465616) RGD PMID:21465616 MGI:4948979 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:97168 (MGI:4948979|PMID:21465616)
Ensembl
RGD
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:2148229 (MGI:3613103|PMID:16368089) RGD PMID:16368089 MGI:3613103 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:106676|MGI:2158732|MGI:2180793|MGI:2656539|MGI:3056345 (MGI:2136068|PMID:11418863), (MGI:2155575|PMID:11311163), (MGI:3042338|PMID:15004567), (MGI:3056019|PMID:15302604), (MGI:3624254|PMID:16496285) RGD PMID:11311163 PMID:11418863 PMID:15004567 PMID:15302604 PMID:16496285 MGI:2136068 MGI:2155575 MGI:3042338 MGI:3056019 MGI:3624254 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:3579117|MGI:3579118 (MGI:3578605|PMID:15829524) RGD PMID:15829524 MGI:3578605 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within ISO MGI:97451 (MGI:3039992|PMID:15105370) RGD PMID:15105370 MGI:3039992 NCBI chr14:96,082,151...96,089,161
Ensembl chr14:96,082,151...96,089,086
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:109448|MGI:1857502|MGI:2661067 (MGI:1197794|PMID:9501024), (MGI:2136711|PMID:11412024), (MGI:2656991|PMID:12652306) RGD PMID:9501024 PMID:11412024 PMID:12652306 MGI:1197794 MGI:2136711 MGI:2656991 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155|MGI:95388 (MGI:2386059|PMID:12196586), (MGI:3578670|PMID:15917450) RGD PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:2155612 (MGI:2151355|PMID:11566859) RGD PMID:11566859 MGI:2151355 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:1857633|MGI:1932339 (MGI:3530206|PMID:15741318), (MGI:80640|PMID:8625838) RGD PMID:8625838 PMID:15741318 MGI:3530206 MGI:80640 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:18519639)
(MGI:3795695|PMID:18519639)
RGD PMID:18519639 MGI:3795695 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within ISO MGI:3847257 (MGI:3847057|PMID:19412548) RGD PMID:19412548 MGI:3847057 NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669
JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:1931079|MGI:88360 (MGI:2154839|PMID:11784046), (MGI:60925|PMID:8388780) RGD PMID:8388780 PMID:11784046 MGI:2154839 MGI:60925 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
JBrowse link
G Ring1 ring finger protein 1 acts_upstream_of_or_within ISO MGI:1926913|MGI:99150 (MGI:1926247|PMID:11060235), (MGI:3628673|PMID:16624538) RGD PMID:11060235 PMID:16624538 MGI:1926247 MGI:3628673 NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620
JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 acts_upstream_of_or_within ISO MGI:3706668 (MGI:3703453|PMID:17215307) RGD PMID:17215307 MGI:3703453 NCBI chr 5:133,991,167...134,115,893
Ensembl chr 5:133,990,520...134,122,105
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 acts_upstream_of_or_within ISO MGI:96995|MGI:99161 (MGI:3530206|PMID:15741318) RGD PMID:15741318 MGI:3530206 NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within ISO MGI:108078 (MGI:3618960|PMID:16467359) RGD PMID:16467359 MGI:3618960 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:892014 (MGI:3618960|PMID:16467359) RGD PMID:16467359 MGI:3618960 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:1928592|PMID:11118883)
MGI:1934261|MGI:2387802 (MGI:2135419|PMID:11389830)
RGD PMID:11118883 PMID:11389830 MGI:1928592 MGI:2135419 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smad2 SMAD family member 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857691|MGI:2668416 (MGI:1201281|PMID:9529255), (MGI:2136068|PMID:11418863), (MGI:2667288|PMID:12842913)
UniProt
RGD
PMID:9529255 PMID:11418863 PMID:12842913 GO_REF:0000024 MGI:1201281 MGI:2136068 MGI:2667288 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO MGI:1857691|MGI:2656539|MGI:2668393 (MGI:3051711|PMID:15215210) RGD PMID:15215210 MGI:3051711 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:2450929 (MGI:5438143|PMID:22987639)
Ensembl
RGD
PMID:22987639 GO_REF:0000107 MGI:5438143 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:104686|MGI:2179191 (MGI:3039048|PMID:15084464), (MGI:3614586|PMID:16399080)
UniProt
RGD
PMID:15084464 PMID:16399080 GO_REF:0000024 MGI:3039048 MGI:3614586 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:3042261|MGI:3042262|MGI:3042264 (MGI:3056222|PMID:15384171) RGD PMID:15384171 MGI:3056222 NCBI chr 1:52,298,099...52,309,813
Ensembl chr 1:52,298,099...52,305,864
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:84545|PMID:8955271) RGD PMID:8955271 MGI:84545 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:87912 (MGI:3695190|PMID:16845371) RGD PMID:16845371 MGI:3695190 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within ISO MGI:3721421 (MGI:3720547|PMID:17586487) RGD PMID:17586487 MGI:3720547 NCBI chr18:77,376,399...77,452,315
Ensembl chr18:77,377,394...77,453,509
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (MGI:3844764|PMID:19334287) RGD PMID:19334287 MGI:3844764 NCBI chr 4:161,590,478...161,632,514
Ensembl chr 4:161,590,479...161,632,149
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (MGI:3835694|PMID:18849982) RGD PMID:18849982 MGI:3835694 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2178826 (MGI:1341483|PMID:10431240) RGD PMID:10431240 MGI:1341483 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3044441|PMID:15148409) RGD PMID:15148409 MGI:3044441 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (MGI:3039991|PMID:15073149), (MGI:4413372|PMID:19795512) RGD PMID:15073149 PMID:19795512 MGI:3039991 MGI:4413372 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Yy1 YY1 transcription factor acts_upstream_of_or_within ISO MGI:1101770|MGI:2445451 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI:2182708 (MGI:1859075|PMID:10835630) RGD PMID:10835630 MGI:1859075 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011
JBrowse link
G Zic3 Zic family member 3 acts_upstream_of_or_within ISO MGI:97359 (MGI:3624254|PMID:16496285) RGD PMID:16496285 MGI:3624254 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98956 (MGI:1891551|PMID:11029008) RGD PMID:11029008 MGI:1891551 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839484 (MGI:4839483|PMID:20630950) RGD PMID:20630950 MGI:4839483 NCBI chr  X:66,404,622...66,427,772
Ensembl chr  X:66,404,760...66,428,387
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1298218 (MGI:1891551|PMID:11029008) RGD PMID:11029008 MGI:1891551 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
BMP signaling pathway involved in heart induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO
ISS
(PMID:19736317)
GO_REF:0000024
RGD
UniProt
PMID:19736317 GO_REF:0000024 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO
IEA
ISS
(PMID:20702560)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20702560 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
BMP signaling pathway involved in renal system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3710018|PMID:17442697)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17442697 GO_REF:0000024 GO_REF:0000107 MGI:3710018 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
BMP signaling pathway involved in spinal cord dorsal/ventral patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in IEA
ISO
GO_REF:0000107
(PMID:11472837)
Ensembl
RGD
PMID:11472837 GO_REF:0000107 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (MGI:64171|PMID:7903221) RGD PMID:7903221 MGI:64171 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857626 (MGI:1098901|PMID:9367425)
GO_REF:0000107
RGD
Ensembl
PMID:9367425 GO_REF:0000107 MGI:1098901 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (MGI:67780|PMID:7925021) RGD PMID:7925021 MGI:67780 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zic2 Zic family member 2 involved_in ISO MGI:106676 (MGI:3714675|PMID:17490632) RGD PMID:17490632 MGI:3714675 NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106679 (MGI:3714675|PMID:17490632) RGD PMID:17490632 MGI:3714675 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5566553|PMID:24531968)
Ensembl
RGD
PMID:24531968 GO_REF:0000107 MGI:5566553 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (MGI:5486528|PMID:23431145) RGD PMID:23431145 MGI:5486528 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
JBrowse link
G Dmrta2 DMRT-like family A2 acts_upstream_of_or_within ISO MGI:5527461 (MGI:5524255|PMID:23056351), (MGI:5605467|PMID:22923088) RGD PMID:22923088 PMID:23056351 MGI:5524255 MGI:5605467 NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:95388 (MGI:3043493|PMID:15147765) RGD PMID:15147765 MGI:3043493 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:95387 (MGI:3043493|PMID:15147765), (MGI:3606726|PMID:12764040) RGD PMID:12764040 PMID:15147765 MGI:3043493 MGI:3606726 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within
involved_in
ISO MGI:2176173|MGI:3802572 (MGI:5486528|PMID:23431145)
(MGI:6220563|PMID:30186101)
RGD PMID:23431145 PMID:30186101 MGI:5486528 MGI:6220563 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 acts_upstream_of_or_within ISO MGI:3521756 (MGI:3763674|PMID:17828260) RGD PMID:17828260 MGI:3763674 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6220563|PMID:30186101)
MGI:1856155 (MGI:3606726|PMID:12764040), (MGI:5486528|PMID:23431145)
Ensembl
RGD
PMID:12764040 PMID:23431145 PMID:30186101 GO_REF:0000107 MGI:3606726 MGI:5486528 MGI:6220563 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Tra2b transformer 2 beta acts_upstream_of_or_within ISO MGI:2176173|MGI:4450919 (MGI:5584349|PMID:24586484) RGD PMID:24586484 MGI:5584349 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
JBrowse link
compartment pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861919 (MGI:2181244|PMID:12001066)
Ensembl
RGD
PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Dll3 delta like canonical Notch ligand 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857008 (MGI:2181244|PMID:12001066)
Ensembl
RGD
PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO MGI:1933734 (MGI:2181244|PMID:12001066) RGD PMID:12001066 MGI:2181244 NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857877 (MGI:2181244|PMID:12001066) RGD PMID:12001066 MGI:2181244 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108078|MGI:1860298 (MGI:3793375|PMID:18257070)
Ensembl
RGD
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (MGI:4946570|PMID:21307093) RGD PMID:21307093 MGI:4946570 NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (MGI:4946570|PMID:21307093) RGD PMID:21307093 MGI:4946570 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO MGI:5007367 (MGI:6405644|PMID:31887266) RGD PMID:31887266 MGI:6405644 NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676
JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) RGD PMID:22581229 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757
JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA
(PMID:19944405)
GO_REF:0000107
RGD
Ensembl
PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:3722325 (MGI:3839019|PMID:18043505)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18043505 GO_REF:0000024 GO_REF:0000107 MGI:3839019 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
determination of dorsal identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist involved_in ISO (PMID:9660951) RGD PMID:9660951 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:9660951) RGD PMID:9660951 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Grem2 gremlin 2, DAN family BMP antagonist involved_in ISO (MGI:5507937|PMID:23063586) RGD PMID:23063586 MGI:5507937 NCBI chr13:86,778,543...86,871,509
Ensembl chr13:86,778,500...86,871,615
JBrowse link
G Nbl1 NBL1, DAN family BMP antagonist involved_in ISO (MGI:1203284|PMID:9660951) RGD PMID:9660951 MGI:1203284 NCBI chr 5:151,318,752...151,329,948
Ensembl chr 5:151,318,754...151,338,719
JBrowse link
determination of heart left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (MGI:3574743|PMID:15750185) RGD PMID:15750185 MGI:3574743 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in IBA
ISO
PMID:21873635
(MGI:3055649|PMID:15466485)
RGD PMID:15466485 PMID:21873635 MGI:3055649, RGD:13792537 NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (MGI:1927045|PMID:11076684) RGD PMID:11076684 MGI:1927045 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO MGI:1857639 (MGI:1203269|PMID:9576835) RGD PMID:9576835 MGI:1203269 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:3722325 (MGI:3839019|PMID:18043505)
GO_REF:0000024
(PMID:23063620)
Ensembl
RGD
UniProt
PMID:18043505 PMID:23063620 GO_REF:0000024 GO_REF:0000107 MGI:3839019 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in ISO (MGI:5700258|PMID:26437028) RGD PMID:26437028 MGI:5700258 NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO MGI:5445347 (MGI:5607335|PMID:25192045) RGD PMID:25192045 MGI:5607335 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1856184 (MGI:1328649|PMID:10349618) RGD PMID:10349618 MGI:1328649 NCBI chr 1:52,298,099...52,309,813
Ensembl chr 1:52,298,099...52,305,864
JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dand5 DAN domain BMP antagonist family member 5 involved_in ISO (MGI:3055649|PMID:15466485) RGD PMID:15466485 MGI:3055649 NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
GO_REF:0000107
(MGI:5142377|PMID:11517919)
Ensembl
RGD
PMID:11517919 GO_REF:0000107 MGI:5142377 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5142377|PMID:11517919)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11517919 GO_REF:0000024 GO_REF:0000107 MGI:5142377 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
determination of left/right asymmetry in nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within ISO MGI:1856917 (MGI:3785303|PMID:18414654) RGD PMID:18414654 MGI:3785303 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
JBrowse link
G Zic3 Zic family member 3 involved_in ISO (MGI:2178095|PMID:11959836) RGD PMID:11959836 MGI:2178095 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
determination of left/right symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:1931734 (MGI:3522525|PMID:15531373) RGD PMID:15531373 MGI:3522525 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
G Acvr1c activin A receptor type 1C NOT|acts_upstream_of_or_within ISO MGI:3512292 (MGI:3511374|PMID:15485907) RGD PMID:15485907 MGI:3511374 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
JBrowse link
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:87912 (MGI:3689276|PMID:16991118)
Ensembl
RGD
PMID:16991118 GO_REF:0000107 MGI:3689276 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
JBrowse link
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO MGI:102806|MGI:1857709 (MGI:3689276|PMID:16991118), (MGI:894948|PMID:9242489) RGD PMID:9242489 PMID:16991118 MGI:3689276 MGI:894948 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
JBrowse link
G Alg5 ALG5, dolichyl-phosphate beta-glucosyltransferase acts_upstream_of_or_within ISO MGI:3578146 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr 2:138,936,998...138,951,228
Ensembl chr 2:138,936,993...138,951,216
JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5644076|PMID:25807483)
Ensembl
RGD
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 5:61,309,183...61,350,596
Ensembl chr 5:61,309,183...61,350,596
JBrowse link
G Ap1b1 adaptor related protein complex 1 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5644076|PMID:25807483)
Ensembl
RGD
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778
JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO MGI:3578151 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
JBrowse link
G Bicc1 BicC family RNA binding protein 1 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr20:17,449,644...17,686,775
Ensembl chr20:17,449,560...17,686,776
JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO MGI:5708063 (MGI:5644076|PMID:25807483), (MGI:5696765|PMID:24947469) RGD PMID:24947469 PMID:25807483 MGI:5644076 MGI:5696765 NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949
JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757
JBrowse link
G Ccdc39 coiled-coil domain containing 39 acts_upstream_of_or_within ISO MGI:5316786 (MGI:5644076|PMID:25807483), (MGI:6161988|PMID:28289722) RGD PMID:25807483 PMID:28289722 MGI:5644076 MGI:6161988 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc40 coiled-coil domain containing 40 acts_upstream_of_or_within ISO MGI:97359 (MGI:5914406|PMID:28182636) RGD PMID:28182636 MGI:5914406 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 7:35,310,071...35,399,392
Ensembl chr 7:35,310,199...35,399,392
JBrowse link
G Cfap53 cilia and flagella associated protein 53 involved_in ISO (PMID:26531781) RGD PMID:26531781 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318
JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2179530 (MGI:1346729|PMID:10521397), (MGI:5644076|PMID:25807483)
RGD PMID:10521397 PMID:25807483 PMID:21873635 MGI:1346729 MGI:5644076, RGD:13792537 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3574743|PMID:15750185)
UniProt
RGD
PMID:15750185 GO_REF:0000024 MGI:3574743 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Daam2 dishevelled associated activator of morphogenesis 2 acts_upstream_of_or_within ISO MGI:4841108 (MGI:5543845|PMID:24091014) RGD PMID:24091014 MGI:5543845 NCBI chr 9:11,428,913...11,546,982
Ensembl chr 9:11,428,724...11,545,497
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO MGI:3056132|MGI:97359 (MGI:3055649|PMID:15466485) RGD PMID:15466485 MGI:3055649 NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
JBrowse link
G Daw1 dynein assembly factor with WD repeats 1 acts_upstream_of_or_within ISO MGI:5431501 (MGI:5644076|PMID:25807483), (MGI:6161988|PMID:28289722) RGD PMID:25807483 PMID:28289722 MGI:5644076 MGI:6161988 NCBI chr 9:84,435,552...84,472,632
Ensembl chr 9:84,435,552...84,472,635
JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO MGI:2429759|MGI:2448055 (MGI:2389012|PMID:12421714), (MGI:3577662|PMID:15755804) RGD PMID:12421714 PMID:15755804 MGI:2389012 MGI:3577662 NCBI chr13:94,720,928...94,866,702
Ensembl chr13:94,720,928...94,866,702
JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO MGI:1861919 (MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:2661305 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Dnaaf3 dynein, axonemal, assembly factor 3 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 1:69,291,300...69,299,365
Ensembl chr 1:69,291,454...69,299,344
JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
(MGI:5644076|PMID:25807483)
(MGI:5544549|PMID:23872636)
(PMID:23872636)
PMID:21873635
UniProt
RGD
PMID:23872636 PMID:25807483 PMID:21873635 GO_REF:0000024 MGI:5544549 MGI:5644076, RGD:13792537 NCBI chr 8:73,696,394...73,711,315
Ensembl chr 8:73,698,103...73,711,292
JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 involved_in
acts_upstream_of_or_within
ISO (PMID:12142464), (PMID:18022865), (PMID:22184204), (PMID:22499950)
MGI:1856917|MGI:2152963|MGI:4821828 (MGI:1099344|PMID:9353118), (MGI:1347236|PMID:10556073), (MGI:5644076|PMID:25807483), (MGI:5811184|PMID:27340223)
RGD PMID:9353118 PMID:10556073 PMID:12142464 PMID:18022865 PMID:22184204 More... MGI:1099344 MGI:1347236 MGI:48750 MGI:5644076 MGI:5811184 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 involved_in
acts_upstream_of_or_within
ISO (PMID:11788826), (PMID:17515466), (PMID:22499950)
MGI:2180081|MGI:5285078 (MGI:2178772|PMID:11912187), (MGI:5644076|PMID:25807483), (MGI:6161988|PMID:28289722)
RGD PMID:11788826 PMID:11912187 PMID:17515466 PMID:22499950 PMID:25807483 More... MGI:2178772 MGI:5644076 MGI:6161988 NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890
JBrowse link
G Dnai1 dynein, axonemal, intermediate chain 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11231901), (PMID:17515466), (PMID:22499950)
(MGI:5644076|PMID:25807483)
RGD PMID:11231901 PMID:17515466 PMID:22499950 PMID:25807483 MGI:5644076 NCBI chr 5:56,730,179...56,800,926
Ensembl chr 5:56,730,179...56,800,925
JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 involved_in ISO (PMID:18950741) RGD PMID:18950741 NCBI chr10:99,759,966...99,793,379
Ensembl chr10:99,759,966...99,793,378
JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within ISO MGI:4262238 (MGI:5429171|PMID:21746835) RGD PMID:21746835 MGI:5429171 NCBI chr 1:244,408,710...244,426,891
Ensembl chr 1:244,408,785...244,426,888
JBrowse link
G Drc1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO MGI:3578144 (MGI:3577662|PMID:15755804), (MGI:3588600|PMID:16061793), (MGI:3610248|PMID:16229832), (MGI:5644076|PMID:25807483) RGD PMID:15755804 PMID:16061793 PMID:16229832 PMID:25807483 MGI:3577662 MGI:3588600 MGI:3610248 MGI:5644076 NCBI chr 8:4,189,257...4,412,183
Ensembl chr 8:4,189,257...4,412,183
JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 acts_upstream_of_or_within ISO MGI:3505858 (MGI:3487175|PMID:15371312) RGD PMID:15371312 MGI:3487175 NCBI chr 6:9,992,537...10,025,403
Ensembl chr 6:9,992,541...10,025,336
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:3056270|PMID:15329346) RGD PMID:15329346 MGI:3056270 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (MGI:1340887|PMID:10411502) RGD PMID:10411502 MGI:1340887 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:2135612 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO MGI:2387775 (MGI:2652200|PMID:12642485) RGD PMID:12642485 MGI:2652200 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Foxj1 forkhead box J1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:5644076|PMID:25807483)
(PMID:31630787)
UniProt
RGD
PMID:25807483 PMID:31630787 GO_REF:0000024 MGI:5644076 NCBI chr10:101,566,299...101,570,249
Ensembl chr10:101,566,304...101,570,237
JBrowse link
G Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:9,837,629...9,871,141
Ensembl chr 4:9,837,629...9,871,140
JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO MGI:3870680 (MGI:5789455|PMID:27472056) RGD PMID:27472056 MGI:5789455 NCBI chr19:51,552,770...51,572,323
Ensembl chr19:51,552,816...51,572,305
JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO MGI:2682066 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:3579954 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980
JBrowse link
G Ift74 intraflagellar transport 74 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 5:109,460,372...109,563,839
Ensembl chr 5:109,474,255...109,563,833
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1859153|MGI:3027342 (MGI:1855904|PMID:10804177), (MGI:3577662|PMID:15755804) RGD PMID:10804177 PMID:15755804 MGI:1855904 MGI:3577662 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:1861960|MGI:3580660 (MGI:1336552|PMID:10220415), (MGI:3577662|PMID:15755804) RGD PMID:10220415 PMID:15755804 MGI:1336552 MGI:3577662 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Lefty1 left right determination factor 1 involved_in ISO (MGI:1277589|PMID:9708732) RGD PMID:9708732 MGI:1277589 NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720
JBrowse link
G LOC691354 hypothetical protein LOC691354 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 5:159,075,217...159,110,642
Ensembl chr 5:159,075,343...159,105,369
JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4410614|MGI:4887578 (MGI:4367169|PMID:19776033), (MGI:4868517|PMID:21045211)
Ensembl
RGD
PMID:19776033 PMID:21045211 GO_REF:0000107 MGI:4367169 MGI:4868517 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655
JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in
acts_upstream_of_or_within
ISO (PMID:26429889), (PMID:26437028)
(MGI:5644076|PMID:25807483)
(MGI:5700258|PMID:26437028)
RGD PMID:25807483 PMID:26429889 PMID:26437028 MGI:5644076 MGI:5700258 NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855
JBrowse link
G Nat8f5 N-acetyltransferase 8 (GCN5-related) family member 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5644076|PMID:25807483)
Ensembl
RGD
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 4:118,260,323...118,285,038
Ensembl chr 4:118,260,252...118,285,704
JBrowse link
G Nek8 NIMA-related kinase 8 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr10:63,060,868...63,073,546
Ensembl chr10:63,061,253...63,072,416
JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:1931319 (MGI:3056270|PMID:15329346) RGD PMID:15329346 MGI:3056270 NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061
JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO MGI:4151115 (MGI:5429171|PMID:21746835) RGD PMID:21746835 MGI:5429171 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:106676|MGI:1344365|MGI:2158732|MGI:2180793|MGI:2388004|MGI:2443893 (MGI:2155575|PMID:11311163), (MGI:2387223|PMID:12231623), (MGI:2652200|PMID:12642485), (MGI:2654412|PMID:12654299), (MGI:3055649|PMID:15466485), (MGI:3624254|PMID:16496285), (MGI:5914406|PMID:28182636) RGD PMID:11311163 PMID:12231623 PMID:12642485 PMID:12654299 PMID:15466485 More... MGI:2155575 MGI:2387223 MGI:2652200 MGI:2654412 MGI:3055649 MGI:3624254 MGI:5914406 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857230|MGI:1857877 (MGI:2661305|PMID:12730124), (MGI:72973|PMID:7789282) RGD PMID:7789282 PMID:12730124 MGI:2661305 MGI:72973 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO MGI:1933205 (MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:2661305 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:3053092 (MGI:5014029|PMID:20350929), (MGI:5316531|PMID:22357932), (MGI:5646191|PMID:17884984) RGD PMID:17884984 PMID:20350929 PMID:22357932 MGI:5014029 MGI:5316531 MGI:5646191 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402
JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO
IBA
(PMID:18371931)
PMID:21873635
(MGI:3807620|PMID:18371931)
RGD PMID:18371931 PMID:21873635 MGI:3807620, RGD:13792537 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 involved_in
acts_upstream_of_or_within
ISO (PMID:23849778)
MGI:5311373 (MGI:5551687|PMID:23849778), (MGI:5644076|PMID:25807483)
RGD PMID:23849778 PMID:25807483 MGI:5551687 MGI:5644076 NCBI chr17:55,216,877...55,409,872
Ensembl chr17:55,218,991...55,409,399
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within
ISO (PMID:25192045)
MGI:5548687 (MGI:5644076|PMID:25807483), (MGI:6360364|PMID:31383820)
RGD PMID:25192045 PMID:25807483 PMID:31383820 MGI:5644076 MGI:6360364 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 acts_upstream_of_or_within ISO MGI:97359 (MGI:1858546|PMID:10809672) RGD PMID:10809672 MGI:1858546 NCBI chr 1:119,428,978...119,627,626
Ensembl chr 1:119,429,265...119,627,596
JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in
ISO MGI:4133392 (MGI:6102515|PMID:27305836)
(MGI:6833916|PMID:34715025)
RGD PMID:27305836 PMID:34715025 MGI:6102515 MGI:6833916 NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568
JBrowse link
G Pierce2 piercer of microtubule wall 2 involved_in ISO (MGI:6833916|PMID:34715025) RGD PMID:34715025 MGI:6833916 NCBI chr 8:73,715,383...73,719,849
Ensembl chr 8:73,715,383...73,719,849
JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in
acts_upstream_of_or_within
ISO (MGI:1277589|PMID:9708732)
MGI:1857844|MGI:1857846|MGI:1857880|MGI:2136268|MGI:2384494|MGI:2445428 (MGI:1344731|PMID:10498698), (MGI:1345532|PMID:10499586), (MGI:1347482|PMID:10572050), (MGI:2135655|PMID:11493526), (MGI:2389284|PMID:12397115), (MGI:5543845|PMID:24091014)
RGD PMID:9708732 PMID:10498698 PMID:10499586 PMID:10572050 PMID:11493526 More... MGI:1277589 MGI:1344731 MGI:1345532 MGI:1347482 MGI:2135655 MGI:2389284 MGI:5543845 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within ISO MGI:2676373 (MGI:2181535|PMID:12062060) RGD PMID:12062060 MGI:2181535 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Pskh1 protein serine kinase H1 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr19:33,794,919...33,827,040
Ensembl chr19:33,794,935...33,827,032
JBrowse link
G Rfx3 regulatory factor X3 acts_upstream_of_or_within ISO MGI:3045792 (MGI:3041887|PMID:15121860) RGD PMID:15121860 MGI:3041887 NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:3513254 (MGI:3715395|PMID:17531978) RGD PMID:17531978 MGI:3715395 NCBI chr 8:87,974,444...87,978,996
Ensembl chr 8:87,974,776...87,978,969
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:3715393|PMID:17553904) RGD PMID:17553904 MGI:3715393 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Rttn rotatin acts_upstream_of_or_within ISO MGI:2674124 (MGI:2178890|PMID:11900971) RGD PMID:11900971 MGI:2178890 NCBI chr18:82,220,999...82,398,334
Ensembl chr18:82,221,050...82,398,333
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:1339521|PMID:10385121), (MGI:1340887|PMID:10411502), (MGI:1346236|PMID:10500184) RGD PMID:10385121 PMID:10411502 PMID:10500184 MGI:1339521 MGI:1340887 MGI:1346236 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO MGI:2137553|MGI:2176255 (MGI:2389012|PMID:12421714), (MGI:3577662|PMID:15755804) RGD PMID:12421714 PMID:15755804 MGI:2389012 MGI:3577662 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (MGI:1339521|PMID:10385121) RGD PMID:10385121 MGI:1339521 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:3512046 (MGI:3604917|PMID:16155214) RGD PMID:16155214 MGI:3604917 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179191 (MGI:3621085|PMID:16556915)
UniProt
RGD
PMID:16556915 GO_REF:0000024 MGI:3621085 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within ISO MGI:3652354 (MGI:3629366|PMID:16705179) RGD PMID:16705179 MGI:3629366 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO MGI:5007367 (MGI:6405644|PMID:31887266) RGD PMID:31887266 MGI:6405644 NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676
JBrowse link
G Tmem67 transmembrane protein 67 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (MGI:3611726|PMID:16291790) RGD PMID:16291790 MGI:3611726 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (MGI:5543845|PMID:24091014) RGD PMID:24091014 MGI:5543845 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Zic3 Zic family member 3 involved_in
acts_upstream_of_or_within
ISO (PMID:9354794)
MGI:2180720|MGI:3043027|MGI:97359 (MGI:3056222|PMID:15384171), (MGI:3624254|PMID:16496285)
RGD PMID:9354794 PMID:15384171 PMID:16496285 MGI:3056222 MGI:3624254 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA
(PMID:19944405)
GO_REF:0000107
RGD
Ensembl
PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
determination of pancreatic left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19944405)
Ensembl
RGD
PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931) RGD PMID:18371931 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
determination of ventral identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aida axin interactor, dorsalization associated involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:94,940,311...94,967,920
Ensembl chr13:94,939,741...94,967,920
JBrowse link
dorsal/ventral axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:1337175|PMID:10330403) RGD PMID:10330403 MGI:1337175 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2181295 (MGI:2670493|PMID:12923052) RGD PMID:12923052 MGI:2670493 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2148594|MGI:2158470 (MGI:2670493|PMID:12923052)
GO_REF:0000107
RGD
Ensembl
PMID:12923052 GO_REF:0000107 MGI:2670493 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:3823171|PMID:18985738) RGD PMID:18985738 MGI:3823171 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Mdfi MyoD family inhibitor involved_in ISO (MGI:4441142|PMID:11238923) RGD PMID:11238923 MGI:4441142 NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856155|MGI:1934347 (MGI:1350715|PMID:10588713)
Ensembl
RGD
PMID:10588713 GO_REF:0000107 MGI:1350715 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Senp2 SUMO specific peptidase 2 IDA RGD PMID:10944533 RGD:1299408 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:9192640)
Ensembl
RGD
PMID:9192640 GO_REF:0000107 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2159246|MGI:2388160 (MGI:2157789|PMID:11830578), (MGI:2157790|PMID:11830579)
Ensembl
RGD
PMID:11830578 PMID:11830579 GO_REF:0000107 MGI:2157789 MGI:2157790 NCBI chr 4:116,195,576...116,219,597
Ensembl chr 4:116,195,528...116,219,594
JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (MGI:2450015|PMID:12569130) RGD PMID:12569130 MGI:2450015 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
JBrowse link
dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3046395|PMID:15218525)
Ensembl
RGD
PMID:15218525 GO_REF:0000107 MGI:3046395 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of_or_within ISO MGI:107689|MGI:3042750|MGI:3775614|MGI:95728 (MGI:3774974|PMID:18003640), (MGI:3806189|PMID:18590716) RGD PMID:18003640 PMID:18590716 MGI:3774974 MGI:3806189 NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1347476 (MGI:5486225|PMID:23383217)
Ensembl
RGD
PMID:23383217 GO_REF:0000107 MGI:5486225 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347472|MGI:95841 (MGI:3806189|PMID:18590716), (MGI:5486225|PMID:23383217), (MGI:894511|PMID:9226455) RGD PMID:9226455 PMID:18590716 PMID:23383217 MGI:3806189 MGI:5486225 MGI:894511 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070|MGI:98297 (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940) RGD PMID:17504940 PMID:17504941 MGI:3710451 MGI:3710452 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (MGI:3806189|PMID:18590716), (MGI:3841503|PMID:19286674), (MGI:894564|PMID:9247260) RGD PMID:9247260 PMID:18590716 PMID:19286674 MGI:3806189 MGI:3841503 MGI:894564 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within ISO MGI:1347476 (MGI:894511|PMID:9226455) RGD PMID:9226455 MGI:894511 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within
involved_in
ISO MGI:1341070|MGI:1861960|MGI:95728 (MGI:3806189|PMID:18590716), (MGI:3841503|PMID:19286674)
(MGI:4888042|PMID:21209331)
RGD PMID:18590716 PMID:19286674 PMID:21209331 MGI:3806189 MGI:3841503 MGI:4888042 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (MGI:3806189|PMID:18590716) RGD PMID:18590716 MGI:3806189 NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO (MGI:3806189|PMID:18590716) RGD PMID:18590716 MGI:3806189 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (MGI:1347695|PMID:10557208) RGD PMID:10557208 MGI:1347695 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (MGI:1347695|PMID:10557208) RGD PMID:10557208 MGI:1347695 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:1857447 (MGI:1095757|PMID:9262482) RGD PMID:9262482 MGI:1095757 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO (MGI:69552|PMID:7720556) RGD PMID:7720556 MGI:69552 NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
JBrowse link
G Rnf220 ring finger protein 220 acts_upstream_of_or_within ISO MGI:6393918 (MGI:6220747|PMID:30177510) RGD PMID:30177510 MGI:6220747 NCBI chr 5:130,739,173...130,961,386
Ensembl chr 5:130,739,183...130,961,418
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95655 (MGI:3710017|PMID:17442700), (MGI:3710451|PMID:17504941), (MGI:3806189|PMID:18590716)
(MGI:4888042|PMID:21209331)
Ensembl
RGD
PMID:17442700 PMID:17504941 PMID:18590716 PMID:21209331 GO_REF:0000107 MGI:3710017 MGI:3710451 MGI:3806189 MGI:4888042 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176255 (MGI:3806189|PMID:18590716)
Ensembl
RGD
PMID:18590716 GO_REF:0000107 MGI:3806189 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (MGI:3610767|PMID:16357211) RGD PMID:16357211 MGI:3610767 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,590,478...161,632,514
Ensembl chr 4:161,590,479...161,632,149
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (MGI:64780|PMID:8299937) RGD PMID:8299937 MGI:64780 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Acvr1 activin A receptor type 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:2449944 (MGI:2449253|PMID:12645927) RGD PMID:12645927 MGI:2449253 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO MGI:3578151 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO MGI:1856035 (MGI:3797993|PMID:18316368) RGD PMID:18316368 MGI:3797993 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Bmp1 bone morphogenetic protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:45,551,603...45,595,862
Ensembl chr15:45,551,603...45,595,776
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:107191 (MGI:3574003|PMID:15673568)
PMID:21873635
RGD PMID:15673568 PMID:21873635 MGI:3574003, RGD:13792537 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1338938 (MGI:3574003|PMID:15673568)
PMID:21873635
RGD PMID:15673568 PMID:21873635 MGI:3574003, RGD:13792537 NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
JBrowse link
G Chrd chordin acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2157350 (MGI:2662951|PMID:12810603)
PMID:21873635
RGD PMID:12810603 PMID:21873635 MGI:2662951, RGD:13792537 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567|MGI:2176173 (MGI:3529734|PMID:15708565) RGD PMID:15708565 MGI:3529734 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO MGI:2448055|MGI:98297 (MGI:3051703|PMID:15269168), (MGI:3577662|PMID:15755804) RGD PMID:15269168 PMID:15755804 MGI:3051703 MGI:3577662 NCBI chr13:94,720,928...94,866,702
Ensembl chr13:94,720,928...94,866,702
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO MGI:105373|MGI:3578144|MGI:95729|MGI:98297 (MGI:3577662|PMID:15755804), (MGI:3588600|PMID:16061793), (MGI:3610248|PMID:16229832), (MGI:5441704|PMID:21552265) RGD PMID:15755804 PMID:16061793 PMID:16229832 PMID:21552265 MGI:3577662 MGI:3588600 MGI:3610248 MGI:5441704 NCBI chr 8:4,189,257...4,412,183
Ensembl chr 8:4,189,257...4,412,183
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (MGI:3043904|PMID:15110048) RGD PMID:15110048 MGI:3043904 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:1857163 (MGI:1194987|PMID:9362463), (MGI:81767|PMID:8684466) RGD PMID:8684466 PMID:9362463 MGI:1194987 MGI:81767 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G Fbxl15 F-box and leucine-rich repeat protein 15 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:245,189,732...245,191,973
Ensembl chr 1:245,189,736...245,192,007
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of_or_within ISO MGI:3042750 (MGI:3039989|PMID:15105374) RGD PMID:15105374 MGI:3039989 NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:99783 (MGI:1344734|PMID:10498685) RGD PMID:10498685 MGI:1344734 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:1857771|MGI:1932522 (MGI:2679162|PMID:14566948), (MGI:3581994|PMID:15893304) RGD PMID:14566948 PMID:15893304 MGI:2679162 MGI:3581994 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070 (MGI:3710452|PMID:17504940) RGD PMID:17504940 MGI:3710452 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (MGI:3617688|PMID:16342201) RGD PMID:16342201 MGI:3617688 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95727 (MGI:3617688|PMID:16342201) RGD PMID:16342201 MGI:3617688 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856275|MGI:1856276 (MGI:2445272|PMID:12435629), (MGI:3028732|PMID:14723851), (MGI:3624182|PMID:16571630) RGD PMID:12435629 PMID:14723851 PMID:16571630 MGI:2445272 MGI:3028732 MGI:3624182 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Hhip Hedgehog-interacting protein acts_upstream_of_or_within ISO MGI:105373 (MGI:3511726|PMID:15576403) RGD PMID:15576403 MGI:3511726 NCBI chr19:27,863,684...27,952,528
Ensembl chr19:27,863,213...27,952,528
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:2135652 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857626|MGI:96183 (MGI:1335668|PMID:10230789)
GO_REF:0000107
RGD
Ensembl
PMID:10230789 GO_REF:0000107 MGI:1335668 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96174 (MGI:1335668|PMID:10230789) RGD PMID:10230789 MGI:1335668 NCBI chr10:81,317,927...81,320,223
Ensembl chr10:81,318,026...81,320,192
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:2135652 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO MGI:3578529|MGI:98297 (MGI:3577662|PMID:15755804), (MGI:5441704|PMID:21552265) RGD PMID:15755804 PMID:21552265 MGI:3577662 MGI:5441704 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:108075|MGI:2682066 (MGI:2679893|PMID:14603322), (MGI:3577662|PMID:15755804), (MGI:3588600|PMID:16061793), (MGI:5441704|PMID:21552265)
GO_REF:0000107
RGD
Ensembl
PMID:14603322 PMID:15755804 PMID:16061793 PMID:21552265 GO_REF:0000107 MGI:2679893 MGI:3577662 MGI:3588600 MGI:5441704 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:3579954 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:3027342 (MGI:3577662|PMID:15755804), (MGI:3579954|PMID:15930098) RGD PMID:15755804 PMID:15930098 MGI:3577662 MGI:3579954 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:3580660 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1347476 (MGI:1344734|PMID:10498685)
UniProt
RGD
PMID:10498685 GO_REF:0000024 MGI:1344734 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1890208 (MGI:1930361|PMID:11165475), (MGI:2679162|PMID:14566948)
Ensembl
RGD
PMID:11165475 PMID:14566948 GO_REF:0000107 MGI:1930361 MGI:2679162 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO MGI:2385819 (MGI:3771226|PMID:18037398) RGD PMID:18037398 MGI:3771226 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within
involved_in
ISO (PMID:10767331)
(MGI:3687803|PMID:10767331)
RGD PMID:10767331 MGI:3687803 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
JBrowse link
G Lrp4 LDL receptor related protein 4 acts_upstream_of_or_within ISO MGI:3621893|MGI:3707955 (MGI:3619629|PMID:16207730), (MGI:3703100|PMID:17119023) RGD PMID:16207730 PMID:17119023 MGI:3619629 MGI:3703100 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Nog noggin involved_in IBA
ISO
IEA
PMID:21873635
(PMID:7666191)
GO_REF:0000107
RGD
Ensembl
PMID:7666191 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:1857063 (MGI:64560|PMID:8155581) RGD PMID:8155581 MGI:64560 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:2661067 (MGI:2656991|PMID:12652306) RGD PMID:12652306 MGI:2656991 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3522498 (MGI:3618450|PMID:16423343) RGD PMID:16423343 MGI:3618450 NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155|MGI:2156741|MGI:3521718 (MGI:3512833|PMID:15548580), (MGI:3581509|PMID:15878992) RGD PMID:15548580 PMID:15878992 MGI:3512833 MGI:3581509 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:1856842|MGI:3521736 (MGI:2389279|PMID:12183375), (MGI:3512715|PMID:15459176) RGD PMID:12183375 PMID:15459176 MGI:2389279 MGI:3512715 NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434
JBrowse link
G Ptch1 patched 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1341847 (MGI:3511726|PMID:15576403)
UniProt
RGD
PMID:15576403 GO_REF:0000024 MGI:3511726 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1916147|MGI:1932386 (MGI:3051703|PMID:15269168), (MGI:5441704|PMID:21552265)
UniProt
RGD
PMID:15269168 PMID:21552265 GO_REF:0000024 MGI:3051703 MGI:5441704 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO MGI:2137553|MGI:2176173|MGI:2176256 (MGI:3577662|PMID:15755804), (MGI:3624182|PMID:16571630) RGD PMID:15755804 PMID:16571630 MGI:3577662 MGI:3624182 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Sp8 Sp8 transcription factor acts_upstream_of_or_within ISO MGI:2684137 (MGI:2679409|PMID:14597661) RGD PMID:14597661 MGI:2679409 NCBI chr 6:139,816,258...139,818,865
Ensembl chr 6:139,814,819...139,823,168
Ensembl chr 6:139,814,819...139,823,168
JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within ISO MGI:3580099 (MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:3579960 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within ISO MGI:3698004 (MGI:3697552|PMID:17082251) RGD PMID:17082251 MGI:3697552 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
JBrowse link
G Tll1 tolloid-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:25,509,146...25,710,330
Ensembl chr16:25,509,146...25,709,543
JBrowse link
G Tll2 tolloid-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:239,916,017...240,027,916
Ensembl chr 1:239,915,508...240,028,120
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:1857704 (MGI:1194987|PMID:9362463), (MGI:71658|PMID:7885472) RGD PMID:7885472 PMID:9362463 MGI:1194987 MGI:71658 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583785 (MGI:3611958|PMID:16314491)
Ensembl
RGD
PMID:16314491 GO_REF:0000107 MGI:3611958 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO MGI:2179442 (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2386265 (MGI:87488|PMID:9136932) RGD PMID:9136932 MGI:87488 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (MGI:3054669|PMID:15475956) RGD PMID:15475956 MGI:3054669 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458
JBrowse link
G Invs inversin acts_upstream_of_or_within ISO MGI:1856915 (MGI:892786|PMID:9192865) RGD PMID:9192865 MGI:892786 NCBI chr 5:62,610,916...62,763,813
Ensembl chr 5:62,610,968...62,763,350
JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5551355|PMID:24052814)
GO_REF:0000107
CAFA
RGD
Ensembl
PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1927227 (MGI:892786|PMID:9192865)
Ensembl
RGD
PMID:9192865 GO_REF:0000107 MGI:892786 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Pifo primary cilia formation acts_upstream_of_or_within ISO MGI:4819764 (MGI:4819432|PMID:20643351) RGD PMID:20643351 MGI:4819432 NCBI chr 2:193,475,785...193,493,092
Ensembl chr 2:193,475,782...193,493,139
JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in ISO (MGI:3783941|PMID:17234970) RGD PMID:17234970 MGI:3783941 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2677178|PMID:14511481) RGD PMID:14511481 MGI:2677178 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in ISO
ISS
IBA
(PMID:21131972)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:21131972 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in IBA
ISO
PMID:21873635
(MGI:4936771|PMID:21131974)
(PMID:21131974)
RGD PMID:21131974 PMID:21873635 MGI:4936771, RGD:13792537 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
JBrowse link
G Cfap45 cilia and flagella associated protein 45 acts_upstream_of_or_within ISO MGI:6509073 (MGI:6479264|PMID:33139725) RGD PMID:33139725 MGI:6479264 NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878
JBrowse link
G Cfap53 cilia and flagella associated protein 53 acts_upstream_of_or_within ISO MGI:6720857 (MGI:6503922|PMID:33347437) RGD PMID:33347437 MGI:6503922 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318
JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within
ISO (PMID:23122589)
MGI:6147714 (MGI:6147712|PMID:27353389)
RGD PMID:23122589 PMID:27353389 MGI:6147712 NCBI chr 7:98,141,525...98,245,906
Ensembl chr 7:98,144,763...98,245,837
JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within ISO MGI:1856917 (MGI:3629280|PMID:10549278), (MGI:5913669|PMID:22102620) RGD PMID:10549278 PMID:22102620 MGI:3629280 MGI:5913669 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
JBrowse link
G Invs inversin acts_upstream_of_or_within ISO MGI:1856915 (MGI:3629280|PMID:10549278) RGD PMID:10549278 MGI:3629280 NCBI chr 5:62,610,916...62,763,813
Ensembl chr 5:62,610,968...62,763,350
JBrowse link
G Megf8 multiple EGF-like-domains 8 NOT|acts_upstream_of_or_within ISO MGI:3722325 (MGI:3839019|PMID:18043505) RGD PMID:18043505 MGI:3839019 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO MGI:5548687 (MGI:6360364|PMID:31383820) RGD PMID:31383820 MGI:6360364 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within
ISO (PMID:27486780)
MGI:6110171 (MGI:5913140|PMID:27486780)
RGD PMID:27486780 MGI:5913140 NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603
JBrowse link
G Ofd1 Ofd1 centriole and centriolar satellite protein involved_in ISO (MGI:3617259|PMID:16311594) RGD PMID:16311594 MGI:3617259 NCBI chr  X:28,015,347...28,056,115
Ensembl chr  X:28,015,347...28,056,110
JBrowse link
G Rfx3 regulatory factor X3 involved_in ISO (MGI:3041887|PMID:15121860) RGD PMID:15121860 MGI:3041887 NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
JBrowse link
establishment of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 acts_upstream_of_or_within ISO MGI:5056368 (MGI:6111002|PMID:29317443) RGD PMID:29317443 MGI:6111002 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Cfap45 cilia and flagella associated protein 45 involved_in ISO (PMID:33139725) RGD PMID:33139725 NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878
JBrowse link
G Cfap52 cilia and flagella associated protein 52 involved_in ISO (PMID:33139725) RGD PMID:33139725 NCBI chr10:52,613,761...52,654,922
Ensembl chr10:52,613,762...52,654,934
JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:5526981|MGI:5532530 (MGI:5514194|PMID:23525783), (MGI:6358908|PMID:31107948)
GO_REF:0000107
RGD
Ensembl
PMID:23525783 PMID:31107948 GO_REF:0000107 MGI:5514194 MGI:6358908 NCBI chr 6:87,661,101...87,670,267
Ensembl chr 6:87,660,821...87,670,199
JBrowse link
G Enkur enkurin, TRPC channel interacting protein involved_in
acts_upstream_of_or_within
ISO (PMID:29257953)
MGI:6156078 (MGI:6110984|PMID:29257953)
RGD PMID:29257953 MGI:6110984 NCBI chr17:83,690,105...83,714,756
Ensembl chr17:83,690,797...83,714,408
JBrowse link
G Pierce1 piercer of microtubule wall 1 involved_in ISO (MGI:6102515|PMID:27305836) RGD PMID:27305836 MGI:6102515 NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568
JBrowse link
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:11923311)
MGI:1859647 (MGI:3629001|PMID:16720875)
RGD PMID:11923311 PMID:16720875 PMID:21873635 MGI:3629001, RGD:13792537 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (MGI:3629001|PMID:16720875) RGD PMID:16720875 MGI:3629001 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in IEA
ISO
GO_REF:0000107
(PMID:8582276)
Ensembl
RGD
PMID:8582276 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO MGI:1859823 (MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:3702790 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:1920441 (MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:3702790 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO MGI:2450901|MGI:98953 (MGI:3772426|PMID:18094027) RGD PMID:18094027 MGI:3772426 NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:102764 (MGI:3772426|PMID:18094027) RGD PMID:18094027 MGI:3772426 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (MGI:3624179|PMID:16613831) RGD PMID:16613831 MGI:3624179 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:1352305|PMID:10625551) RGD PMID:10625551 MGI:1352305 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (MGI:1926244|PMID:11060228), (MGI:1928687|PMID:11124115), (MGI:3838261|PMID:18701439) RGD PMID:11060228 PMID:11124115 PMID:18701439 MGI:1926244 MGI:1928687 MGI:3838261 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857494 (MGI:1339462|PMID:10393115), (MGI:1928567|PMID:11163262), (MGI:2157787|PMID:11830575)
Ensembl
RGD
PMID:10393115 PMID:11163262 PMID:11830575 GO_REF:0000107 MGI:1339462 MGI:1928567 MGI:2157787 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856155|MGI:1856158 (MGI:1913185|PMID:11050125), (MGI:1928687|PMID:11124115), (MGI:3838261|PMID:18701439), (MGI:5662366|PMID:24528677)
Ensembl
RGD
PMID:11050125 PMID:11124115 PMID:18701439 PMID:24528677 GO_REF:0000107 MGI:1913185 MGI:1928687 MGI:3838261 MGI:5662366 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (PMID:18791198) RGD PMID:18791198 NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544 (MGI:4367927|PMID:19732765) RGD PMID:19732765 MGI:4367927 NCBI chr 3:50,861,367...50,935,782
Ensembl chr 3:50,861,367...50,935,903
JBrowse link
forebrain regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2443342 (MGI:1346311|PMID:10529425)
UniProt
RGD
PMID:10529425 GO_REF:0000024 MGI:1346311 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within ISO MGI:1856621|MGI:99783 (MGI:1346311|PMID:10529425) RGD PMID:10529425 MGI:1346311 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:3775846|MGI:3840448 (MGI:5662366|PMID:24528677) RGD PMID:24528677 MGI:5662366 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Wnt2b Wnt family member 2B involved_in
acts_upstream_of_or_within
ISO (PMID:15164427)
(MGI:4821941|PMID:15164427)
RGD PMID:15164427 MGI:4821941 NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
JBrowse link
G Wnt7b Wnt family member 7B involved_in
acts_upstream_of_or_within
ISO (PMID:15164427)
(MGI:4821941|PMID:15164427)
RGD PMID:15164427 MGI:4821941 NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856155|MGI:1856158 (MGI:892757|PMID:9169845)
Ensembl
RGD
PMID:9169845 GO_REF:0000107 MGI:892757 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5907444|PMID:26295701) RGD PMID:26295701 MGI:5907444 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ahi1 Abelson helper integration site 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:F8W3V6 (MGI:5306539|PMID:21959375)
UniProt
RGD
PMID:21959375 GO_REF:0000024 MGI:5306539 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041
JBrowse link
G Aplnr apelin receptor involved_in ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO MGI:3578151 (MGI:5430243|PMID:22554696) RGD PMID:22554696 MGI:5430243 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in ISO (MGI:6717247|PMID:32179481) RGD PMID:32179481 MGI:6717247 NCBI chr 6:122,474,754...122,511,014
Ensembl chr 6:122,474,756...122,510,854
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:3821640 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520
JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) RGD PMID:22581229 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757
JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in IBA
ISO
PMID:21873635
(PMID:22693285)
RGD PMID:22693285 PMID:21873635 RGD:13792537 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:1346729 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (MGI:3574743|PMID:15750185) RGD PMID:15750185 MGI:3574743 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:5523142 (MGI:5509110|PMID:23742838)
GO_REF:0000107
RGD
Ensembl
PMID:23742838 GO_REF:0000107 MGI:5509110 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO
IEA
(MGI:2661305|PMID:12730124)
GO_REF:0000107
RGD
Ensembl
PMID:12730124 GO_REF:0000107 MGI:2661305 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA
(PMID:19944400), (PMID:19944405)
GO_REF:0000107
RGD
Ensembl
PMID:19944400 PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q60838 (MGI:5439040|PMID:22841628)
Ensembl
RGD
PMID:22841628 GO_REF:0000107 MGI:5439040 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P51141 (MGI:5439040|PMID:22841628)
Ensembl
RGD
PMID:22841628 GO_REF:0000107 MGI:5439040 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820
JBrowse link
G Eng endoglin involved_in ISO (MGI:1337912|PMID:10348742), (MGI:4368063|PMID:19703439) RGD PMID:10348742 PMID:19703439 MGI:1337912 MGI:4368063 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (MGI:1340887|PMID:10411502) RGD PMID:10411502 MGI:1340887 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (MGI:3052615|PMID:15310850) RGD PMID:15310850 MGI:3052615 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177 (MGI:1201220|PMID:9486664) RGD PMID:9486664 MGI:1201220 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:2153823 (MGI:1197800|PMID:9500551) RGD PMID:9500551 MGI:1197800 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857639 (MGI:892134|PMID:9171826)
Ensembl
RGD
PMID:9171826 GO_REF:0000107 MGI:892134 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179429 (MGI:3607736|PMID:14659802)
Ensembl
RGD
PMID:14659802 GO_REF:0000107 MGI:3607736 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3829198 (MGI:3828200|PMID:18930042)
GO_REF:0000107
RGD
Ensembl
PMID:18930042 GO_REF:0000107 MGI:3828200 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:3579954 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980
JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO MGI:3707373 (MGI:3703110|PMID:17027958) RGD PMID:17027958 MGI:3703110 NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812
JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:5142377 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) RGD PMID:25463925 MGI:5615026 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2181727 (MGI:1337724|PMID:10330409) RGD PMID:10330409 MGI:1337724 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within ISO MGI:2386948 (MGI:3628723|PMID:12522123) RGD PMID:12522123 MGI:3628723 NCBI chr 1:244,083,873...244,085,690
Ensembl chr 1:244,083,873...244,085,690
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:4413372 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:3830899|PMID:16680724)
UniProt
RGD
PMID:16680724 GO_REF:0000024 MGI:3830899 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:1339460|PMID:10393122) RGD PMID:10393122 MGI:1339460 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (MGI:3603078|PMID:16000382) RGD PMID:16000382 MGI:3603078 NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689
JBrowse link
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:166,345,853...166,471,715
NCBI chr 1:166,491,721...166,530,575
Ensembl chr 1:166,345,859...166,471,719
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1927227 (MGI:3773736|PMID:16510504), (MGI:74918|PMID:7628699), (MGI:892786|PMID:9192865)
Ensembl
RGD
PMID:7628699 PMID:9192865 PMID:16510504 GO_REF:0000107 MGI:3773736 MGI:74918 MGI:892786 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:106676 (MGI:3624254|PMID:16496285) RGD PMID:16496285 MGI:3624254 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Notch1 notch receptor 1 involved_in ISO UniProtKB:O35516 (MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:2661305 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q01705 (MGI:2661305|PMID:12730124)
Ensembl
RGD
PMID:12730124 GO_REF:0000107 MGI:2661305 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:3053092 (MGI:5646191|PMID:17884984) RGD PMID:17884984 MGI:5646191 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402
JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931), (PMID:20007846) RGD PMID:18371931 PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3777011 (MGI:3776202|PMID:17573777) RGD PMID:17573777 MGI:3776202 NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (MGI:1347695|PMID:10557208) RGD PMID:10557208 MGI:1347695 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5142377|PMID:11517919)
MGI:1857796 (MGI:1340887|PMID:10411502), (MGI:1346236|PMID:10500184)
Ensembl
RGD
PMID:10411502 PMID:10500184 PMID:11517919 GO_REF:0000107 MGI:1340887 MGI:1346236 MGI:5142377 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5142377|PMID:11517919)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11517919 GO_REF:0000024 GO_REF:0000107 MGI:5142377 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within
ISO (MGI:3716378|PMID:17655922)
MGI:2179440 (MGI:3716256|PMID:17610846)
RGD PMID:17610846 PMID:17655922 MGI:3716256 MGI:3716378 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2385465|MGI:2386742 (MGI:3603734|PMID:15929941) RGD PMID:15929941 MGI:3603734 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (MGI:1339521|PMID:10385121) RGD PMID:10385121 MGI:1339521 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:3512046 (MGI:3604917|PMID:16155214) RGD PMID:16155214 MGI:3604917 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
JBrowse link
G Tbx20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3604925|PMID:15843409)
MGI:3579849|MGI:3580099 (MGI:3578601|PMID:15843407), (MGI:3579960|PMID:15901664)
RGD PMID:15843407 PMID:15843409 PMID:15901664 PMID:21873635 MGI:3578601 MGI:3579960 MGI:3604925, RGD:13792537 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2655214|MGI:3769504 (MGI:3769096|PMID:17460765), (MGI:4412356|PMID:18723448)
RGD PMID:17460765 PMID:18723448 PMID:21873635 MGI:3769096 MGI:4412356, RGD:13792537 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Tbx6 T-box transcription factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO (MGI:3801267|PMID:17050629) RGD PMID:17050629 MGI:3801267 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4343479|MGI:4456438 (MGI:4453264|PMID:20178780) RGD PMID:20178780 MGI:4453264 NCBI chr12:32,052,542...32,061,596
Ensembl chr12:32,052,543...32,071,903
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in ISO (MGI:2157686|PMID:11440971) RGD PMID:11440971 MGI:2157686 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (MGI:3611726|PMID:16291790) RGD PMID:16291790 MGI:3611726 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1298218 (MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:4413372 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Zic3 Zic family member 3 involved_in
acts_upstream_of_or_within
ISO (PMID:9354794)
MGI:2180720|MGI:3043027|MGI:97359 (MGI:3056222|PMID:15384171), (MGI:3624254|PMID:16496285)
RGD PMID:9354794 PMID:15384171 PMID:16496285 MGI:3056222 MGI:3624254 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
left/right axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ahi1 Abelson helper integration site 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041
JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO MGI:3578151 (MGI:5430243|PMID:22554696) RGD PMID:22554696 MGI:5430243 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (MGI:3054669|PMID:15475956) RGD PMID:15475956 MGI:3054669 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:2661305|PMID:12730124)
Ensembl
RGD
PMID:12730124 GO_REF:0000107 MGI:2661305 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3578147 (MGI:4838374|PMID:20678497) RGD PMID:20678497 MGI:4838374 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Hspb11 heat shock protein family B (small), member 11 acts_upstream_of_or_within ISO MGI:4432759|MGI:5426875 (MGI:5426280|PMID:22595669) RGD PMID:22595669 MGI:5426280 NCBI chr 5:122,035,588...122,062,421
Ensembl chr 5:122,035,581...122,062,421
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2682066|MGI:3829198 (MGI:3828200|PMID:18930042), (MGI:5430243|PMID:22554696)
GO_REF:0000107
RGD
Ensembl
PMID:18930042 PMID:22554696 GO_REF:0000107 MGI:3828200 MGI:5430243 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
JBrowse link
G Mns1 meiosis-specific nuclear structural 1 acts_upstream_of_or_within ISO MGI:5425368 (MGI:5318625|PMID:22396656) RGD PMID:22396656 MGI:5318625 NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925
JBrowse link
G Notch1 notch receptor 1 involved_in ISO UniProtKB:O35516 (MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:2661305 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q01705 (MGI:2661305|PMID:12730124)
Ensembl
RGD
PMID:12730124 GO_REF:0000107 MGI:2661305 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in ISO (MGI:3054669|PMID:15475956) RGD PMID:15475956 MGI:3054669 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (MGI:4946570|PMID:21307093) RGD PMID:21307093 MGI:4946570 NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2137553 (MGI:1267118|PMID:9636176)
Ensembl
RGD
PMID:9636176 GO_REF:0000107 MGI:1267118 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:3698161 (MGI:3697539|PMID:17127413) RGD PMID:17127413 MGI:3697539 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within ISO MGI:5523142 (MGI:5509110|PMID:23742838) RGD PMID:23742838 MGI:5509110 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711
JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 NOT|acts_upstream_of_or_within ISO MGI:3512139 (MGI:4888062|PMID:21203428) RGD PMID:21203428 MGI:4888062 NCBI chr 1:223,317,543...223,324,131
Ensembl chr 1:223,317,642...223,324,131
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO (PMID:19944400) RGD PMID:19944400 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within ISO (MGI:4948830|PMID:20080492) RGD PMID:20080492 MGI:4948830 NCBI chr 1:244,408,710...244,426,891
Ensembl chr 1:244,408,785...244,426,888
JBrowse link
G Foxj1 forkhead box J1 acts_upstream_of_or_within ISO MGI:2158221 (MGI:2156098|PMID:10873152) RGD PMID:10873152 MGI:2156098 NCBI chr10:101,566,299...101,570,249
Ensembl chr10:101,566,304...101,570,237
JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO MGI:3707373 (MGI:3703110|PMID:17027958) RGD PMID:17027958 MGI:3703110 NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812
JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISO
ISS
(PMID:23063620)
(MGI:5551355|PMID:24052814)
GO_REF:0000024
RGD
CAFA
PMID:23063620 PMID:24052814 GO_REF:0000024 MGI:5551355 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO MGI:4151115 (MGI:4948830|PMID:20080492) RGD PMID:20080492 MGI:4948830 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765
JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:4949891 (MGI:4948830|PMID:20080492) RGD PMID:20080492 MGI:4948830 NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO MGI:2183156 (MGI:3654743|PMID:16801545) RGD PMID:16801545 MGI:3654743 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
JBrowse link
G Zic3 Zic family member 3 involved_in ISO (MGI:5465393|PMID:23184148)
MGI:5476827 (MGI:5465393|PMID:23184148), (MGI:5475410|PMID:23303524)
RGD PMID:23184148 PMID:23303524 MGI:5465393 MGI:5475410 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2148567|MGI:2148569 (MGI:4360856|PMID:19686689), (MGI:4361775|PMID:19805295)
GO_REF:0000107
RGD
Ensembl
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO MGI:1261834 (MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:4360856 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO MGI:98954 (MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:4360856 NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
JBrowse link
lung proximal/distal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO (MGI:3577664|PMID:15531758) RGD PMID:15531758 MGI:3577664 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95729 (MGI:3629001|PMID:16720875) RGD PMID:16720875 MGI:3629001 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1099809 (MGI:3629001|PMID:16720875) RGD PMID:16720875 MGI:3629001 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:2687297 (MGI:3629001|PMID:16720875) RGD PMID:16720875 MGI:3629001 NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042
JBrowse link
metanephric capsule specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3525902|PMID:15634693)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15634693 GO_REF:0000024 GO_REF:0000107 MGI:3525902 NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:1857163 (MGI:3525936|PMID:15607945) RGD PMID:15607945 MGI:3525936 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:2150347 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3624192|PMID:16651541) RGD PMID:16651541 MGI:3624192 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:1891551|PMID:11029008), (MGI:4413372|PMID:19795512) RGD PMID:11029008 PMID:19795512 MGI:1891551 MGI:4413372 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1857490 (MGI:59176|PMID:2205396) RGD PMID:2205396 MGI:59176 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in ISO (MGI:3578570|PMID:15857913) RGD PMID:15857913 MGI:3578570 NCBI chr 5:121,691,370...121,828,035
Ensembl chr 5:121,691,393...121,827,992
JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1856382 (MGI:76584|PMID:8555108) RGD PMID:8555108 MGI:76584 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3624192|PMID:16651541) RGD PMID:16651541 MGI:3624192 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104877 (MGI:2149154|PMID:11500373)
Ensembl
RGD
PMID:11500373 GO_REF:0000107 MGI:2149154 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (MGI:2149134|PMID:11522634) RGD PMID:11522634 MGI:2149134 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box transcription factor 18 involved_in ISO (MGI:3722519|PMID:17584735) RGD PMID:17584735 MGI:3722519 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
JBrowse link
negative regulation of determination of dorsal identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddit3 DNA-damage inducible transcript 3 involved_in ISO (PMID:16434966)
(MGI:4821075|PMID:16434966)
RGD PMID:16434966 MGI:4821075 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Sostdc1 sclerostin domain containing 1 involved_in ISO (PMID:15020244) RGD PMID:15020244 NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5498583|PMID:23806618)
UniProt
RGD
PMID:23806618 GO_REF:0000024 MGI:5498583 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530
JBrowse link
G Ofd1 Ofd1 centriole and centriolar satellite protein involved_in ISO (MGI:5498583|PMID:23806618) RGD PMID:23806618 MGI:5498583 NCBI chr  X:28,015,347...28,056,115
Ensembl chr  X:28,015,347...28,056,110
JBrowse link
negative regulation of heart induction by canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A involved_in ISO (PMID:19736317) RGD PMID:19736317 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:3039059|PMID:15042700) RGD PMID:15042700 MGI:3039059 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
JBrowse link
negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:23,330,917...23,340,486