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Gene: Hoxb9 (homeo box B9) Rattus norvegicus
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Symbol: Hoxb9
Name: homeo box B9
Description: Predicted to contribute to RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including cell chemotaxis; embryonic skeletal system morphogenesis; and regionalization. Predicted to localize to RNA polymerase II transcription regulator complex; mitochondrion; and nucleoplasm. Orthologous to human HOXB9 (homeobox B9); INTERACTS WITH 17beta-estradiol; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeobox protein Hox-B9; LOC287647
Orthologs:
Homo sapiens (human) : HOXB9 (homeobox B9)  HGNC  Alliance
Mus musculus (house mouse) : Hoxb9 (homeobox B9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxb9 (homeobox B9)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXB9 (homeobox B9)
Canis lupus familiaris (dog) : HOXB9 (homeobox B9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxb9 (homeobox B9)
Chlorocebus sabaeus (African green monkey) : HOXB9 (homeobox B9)
Heterocephalus glaber (naked mole-rat) : Hoxb9 (homeobox B9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01084,119,772 - 84,124,963 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1084,119,884 - 84,123,390 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01083,922,929 - 83,926,435 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41085,002,254 - 85,005,760 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11085,016,590 - 85,020,992 (+)NCBI
Celera1080,003,380 - 80,054,023 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
  
More on Hoxb9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306158
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.