Gene: Tdrkh (tudor and KH domain containing) Rattus norvegicus
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Symbol: Tdrkh
Name: tudor and KH domain containing
Description: ENCODES a protein that exhibits RNA binding (inferred); INVOLVED IN DNA methylation involved in gamete generation (ortholog); fertilization (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH spinal muscular atrophy (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); pi-body (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; Brodifacoum
AGR Description: Predicted to have RNA binding activity; predicted to be involved in fertilization, gamete generation, and nucleic acid metabolic process; predicted to localize to the mitochondrion, pi-body, and piP-body; orthologous to human TDRKH (tudor and KH domain containing).
Merged Description: Predicted to have RNA binding activity; predicted to be involved in fertilization, gamete generation, and nucleic acid metabolic process; predicted to localize to the mitochondrion, pi-body, and piP-body; orthologous to human TDRKH (tudor and KH domain containing); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; Brodifacoum.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC310652; RGD1311196; similar to hypothetical protein; tudor and KH domain containing protein
Orthologs:
Homo sapiens (human) : TDRKH (tudor and KH domain containing)  HGNC  Alliance
Mus musculus (house mouse) : Tdrkh (tudor and KH domain containing protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tdrkh (tudor and KH domain containing)
Pan paniscus (bonobo/pygmy chimpanzee) : TDRKH (tudor and KH domain containing)
Canis lupus familiaris (dog) : TDRKH (tudor and KH domain containing)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tdrkh (tudor and KH domain containing)
Sus scrofa (pig) : TDRKH (tudor and KH domain containing)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02195,649,813 - 195,674,217 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02215,130,507 - 215,152,911 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42189,384,598 - 189,406,184 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12189,334,719 - 189,351,762 (+)NCBI
Celera2174,599,591 - 174,620,986 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tdrkh
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311196
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.