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Gene: Ripply1 (ripply transcriptional repressor 1) Rattus norvegicus
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Symbol: Ripply1
Name: ripply transcriptional repressor 1
Description: Predicted to be involved in several processes, including Notch signaling pathway; negative regulation of transcription by RNA polymerase II; and somite rostral/caudal axis specification. Predicted to localize to the nucleus. Orthologous to human RIPPLY1 (ripply transcriptional repressor 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog); dorsomorphin (ortholog); hydralazine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC680702; ripply1 homolog; ripply1 homolog (zebrafish); similar to Down syndrome critical region homolog 6
Orthologs:
Homo sapiens (human) : RIPPLY1 (ripply transcriptional repressor 1)  HGNC  Alliance
Mus musculus (house mouse) : Ripply1 (ripply transcriptional repressor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ripply1 (ripply transcriptional repressor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RIPPLY1 (ripply transcriptional repressor 1)
Canis lupus familiaris (dog) : RIPPLY1 (ripply transcriptional repressor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ripply1 (ripply transcriptional repressor 1)
Sus scrofa (pig) : RIPPLY1 (ripply transcriptional repressor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X111,099,420 - 111,114,835 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX111,099,930 - 111,102,464 (-)Ensembl
Rnor_5.0353,488,763 - 53,495,704 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X127,516,006 - 127,518,663 (-)NCBIRGSC3.4rn4RGSC3.4
Celera344,484,028 - 44,490,937 (+)NCBICelera
Cytogenetic MapXq32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ripply1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1588264
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.