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Gene: Hoxd9 (homeo box D9) Rattus norvegicus
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Symbol: Hoxd9
Name: homeo box D9
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including animal organ development; limb morphogenesis; and regulation of transcription by RNA polymerase II. Predicted to localize to the nucleolus. Orthologous to human HOXD9 (homeobox D9); INTERACTS WITH bisphenol A; dibutyl phthalate; (+)-catechin (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeobox Hox-D9; homeobox protein Hox-D9; LOC366083; LOC688999; MGC189507; similar to Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4)
Orthologs:
Homo sapiens (human) : HOXD9 (homeobox D9)  HGNC  Alliance
Mus musculus (house mouse) : Hoxd9 (homeobox D9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxd9 (homeobox D9)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXD9 (homeobox D9)
Canis lupus familiaris (dog) : HOXD9 (homeobox D9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxd9 (homeobox D9)
Sus scrofa (pig) : HOXD9 (homeobox D9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0361,620,192 - 61,622,360 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0368,086,528 - 68,088,228 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera359,122,389 - 59,124,566 (+)NCBICelera
Cytogenetic Map3q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
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Genomics

Comparative Map Data
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Sequence

Nucleotide Sequences
Protein Sequences
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Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Hoxd9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1582908
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.