Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Hoxa7 (homeobox A7) Rattus norvegicus
Analyze
Symbol: Hoxa7
Name: homeobox A7
RGD ID: 1587253
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and transcription factor binding activity. Predicted to be involved in several processes, including embryonic skeletal system morphogenesis; negative regulation of cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to localize to nuclear membrane and nucleoplasm. Orthologous to human HOXA7 (homeobox A7); INTERACTS WITH 2,6-dinitrotoluene; 1,2-dimethylhydrazine (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: homeo box A7; homeo box A7 (mapped); homeobox A9; Homeobox gene A7; homeobox protein Hox-1.1; homeobox protein Hox-A7; homeobox protein R5; hox-1.1; Hox1r5; Hoxa7_mapped; Hoxa9
Orthologs:
Homo sapiens (human) : HOXA7 (homeobox A7)  HGNC  Alliance
Mus musculus (house mouse) : Hoxa7 (homeobox A7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxa7 (homeobox A7)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXA7 (homeobox A7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxa7 (homeobox A7)
Sus scrofa (pig) : HOXA7 (homeobox A7)
Chlorocebus sabaeus (African green monkey) : HOXA7 (homeobox A7)
Heterocephalus glaber (naked mole-rat) : Hoxa7 (homeobox A7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0482,184,299 - 82,187,890 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl482,183,196 - 82,186,190 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04146,851,130 - 146,854,687 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4480,515,622 - 80,517,521 (-)NCBIRGSC3.4rn4RGSC3.4
Celera476,206,442 - 76,208,341 (-)NCBICelera
Cytogenetic Map4q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hoxa7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1587253
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.