Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Hoxd11 (homeobox D11) Rattus norvegicus
Analyze
Symbol: Hoxd11
Name: homeobox D11
Description: Predicted to have sequence-specific DNA binding activity. Predicted to be involved in several processes, including animal organ development; embryonic morphogenesis; and regionalization. Predicted to localize to the nucleoplasm. Orthologous to human HOXD11 (homeobox D11); INTERACTS WITH flusilazole; 17beta-hydroxy-5alpha-androstan-3-one (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC102553842; LOW QUALITY PROTEIN: homeobox protein Hox-D11; uncharacterized LOC102553842
Orthologs:
Homo sapiens (human) : HOXD11 (homeobox D11)  HGNC  Alliance
Mus musculus (house mouse) : Hoxd11 (homeobox D11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxd11 (homeobox D11)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXD11 (homeobox D11)
Canis lupus familiaris (dog) : HOXD11 (homeobox D11)
Sus scrofa (pig) : HOXD11 (homeobox D11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0361,604,256 - 61,606,874 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl361,604,672 - 61,606,400 (+)Ensembl
Rnor_5.0368,071,282 - 68,076,686 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera359,104,507 - 59,109,071 (+)NCBICelera
Cytogenetic Map3q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hoxd11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 7730597
Created: 2013-12-18
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.