Bw82 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bw82 (Body weight QTL 82) Rattus norvegicus

Symbol: Bw82
Name: Body weight QTL 82
RGD ID: 2302276
Previously known as: Bwsdt1
Trait: body mass   (VT:0001259)    
Measurement Type: body weight   (CMO:0000012)    
LOD Score: 4.32
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2339,454,637 - 62,951,183RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0340,523,593 - 64,880,586RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0345,609,749 - 71,439,037RGDRnor5.0
RGSC_v3.4336,556,706 - 60,697,201RGDRGSC3.4
Cross Type: intercross
Strains Crossed: SDT/Jcl F344/NSlc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
obesity  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
body weight  (IDA)

Experimental Condition

Measurement Method

Vertebrate Trait
body mass  (IDA)

Rat Strain
F344/NSlc  (IEA)
SDT/Jcl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Identification of a major locus for islet inflammation and fibrosis in the Spontaneously Diabetic Torii rat. Fuse M, etal., Physiol Genomics. 2008 Jul 8;.
Related QTLs

Related QTL Description Reference
Bw117 maps to same region RGD:2298688
Bw24 maps to same region RGD:2298688
Bw36 maps to same region RGD:2298688
Bw31 maps to same region RGD:2298688


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
735044Galnt13polypeptide N-acetylgalactosaminyltransferase 1333890369539560683Rat
41385392Mrps21-ps2mitochondrial ribosomal protein S21, pseudogene 233945908339459334Rat
1598165Hsp90ab1-ps23heat shock protein 90 alpha family class B member 1, pseudogene 2333953186339534065Rat
41256231LOC120102130U6 spliceosomal RNA33962913339629239Rat
11502263LOC108350374uncharacterized LOC10835037433993432739943737Rat
2958Kcnj3potassium inwardly-rectifying channel, subfamily J, member 333994489640106646Rat
2324286Ofd1-ps1Ofd1 centriole and centriolar satellite protein, pseudogene 134051788940522835Rat
7571468Gapdh-ps94Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 9434070575640706713Rat
41270589LOC120101439uncharacterized LOC12010143934108407641091751Rat
41386871LOC1201020405S ribosomal RNA34127416641274284Rat
7624465LOC102552656uncharacterized LOC10255265634140397441420166Rat
41194913Rnu6-641RNA, U6 small nuclear 64134166480541664911Rat
3202Nr4a2nuclear receptor subfamily 4, group A, member 234168984741707036Rat
11471288Trnaa-cgc1transfer RNA alanine (anticodon CGC) 134176222741762298Rat
2726Gpd2glycerol-3-phosphate dehydrogenase 234180055241937729Rat
1589694Gapdh-ps4Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 434196962741994850Rat
41263037LOC120101440uncharacterized LOC12010144034209700342112153Rat
6487629Zfp532-ps1zinc finger protein 532, pseudogene 134253559342539695Rat
620361Galnt5polypeptide N-acetylgalactosaminyltransferase 534257362242619881Rat
1308367Ermnermin34262816042633816Rat
1307990Cytipcytohesin 1 interacting protein34269805842774955Rat
7739841LOC102555754uncharacterized LOC10255575434273588542743489Rat
621789Acvr1cactivin A receptor type 1C34281549042892423Rat
620200Acvr1activin A receptor type 134297855843097892Rat
7554908LOC102555913uncharacterized LOC10255591334309817143101848Rat
1589693Gapdh-ps1glyceraldehyde-3-phosphate dehydrogenase, pseudogene 134321236343214261Rat
7671946LOC102556145uncharacterized LOC10255614534325161443259310Rat
1308188Upp2uridine phosphorylase 234327304843317417Rat
1561169Ccdc148coiled-coil domain containing 14834335688543631999Rat
1307840Pkp4plakophilin 434363236443835834Rat
41094759Rps14-ps3ribosomal protein S14, pseudogene 334387634543876799Rat
1309610Dapl1death associated protein-like 134396099343980940Rat
41255996LOC120101955U6 spliceosomal RNA34404418944044292Rat
1302949Tanc1tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 134409938744335478Rat
1359296Wdsub1WD repeat, sterile alpha motif and U-box domain containing 134434041544370890Rat
1309801Baz2bbromodomain adjacent to zinc finger domain, 2B34438428244681619Rat
7716591Arf4-ps1ADP-ribosylation factor 4, pseudogene 134462585044630139Rat
41047996Rnu6-22RNA, U6 small nuclear 2234466084744660953Rat
1308993Marchf7membrane associated ring-CH-type finger 734468022944720172Rat
41254171LOC120101908uncharacterized LOC12010190834470164544705078Rat
1307606Cd302CD302 molecule34472232444756045Rat
7489036Mir6216microRNA 621634475686144756938Rat
41332538LOC120101907uncharacterized LOC12010190734476111544773503Rat
1565962Ly75lymphocyte antigen 7534476470244852219Rat
1309777Pla2r1phospholipase A2 receptor 134488394345013793Rat
1303119Itgb6integrin subunit beta 634504629545170532Rat
41106923LOC120102123U4 spliceosomal RNA34513767345137755Rat
11446749LOC108350379uncharacterized LOC10835037934514411645149094Rat
1307777Rbms1RNA binding motif, single stranded interacting protein 134519582845420406Rat
1594533Psmd8-ps1proteasome 26S subunit, non-ATPase 8, pseudogene 134545612445469819Rat
11391174LOC108352564uncharacterized LOC10835256434566369645700941Rat
41258419LOC120102049small nucleolar RNA SNORA1734579319345793322Rat
41124612LOC120101552uncharacterized LOC12010155234605991446066272Rat
628859TankTRAF family member-associated NFKB activator34611423046190270Rat
1594532Psmd14proteasome 26S subunit, non-ATPase 1434625433846347076Rat
9112027LOC103691831cation-dependent mannose-6-phosphate receptor pseudogene34627299746287040Rat
1591773Tbr1T-box brain transcription factor 134635023746368397Rat
41179729Rnu6-249RNA, U6 small nuclear 24934643474946434854Rat
41018897Rpl9-ps12ribosomal protein L9, pseudogene 1234647779646480228Rat
631407Slc4a10solute carrier family 4 member 1034666507646959088Rat
2515Dpp4dipeptidylpeptidase 434696223347043870Rat
41063319LOC120101554uncharacterized LOC12010155434707772347101724Rat
9363799LOC103691814uncharacterized LOC10369181434709350047096631Rat
2668Gcgglucagon34711391447122958Rat
621253Fapfibroblast activation protein, alpha34713882347207671Rat
1560496Ifih1interferon induced with helicase C domain 134722898047275403Rat
1306589Gcagrancalcin34729732047329913Rat
621112Kcnh7potassium voltage-gated channel subfamily H member 734732933847822122Rat
41098018LOC120102053small nucleolar RNA SNORA1734744325747443380Rat
11432617LOC108350383uncharacterized LOC10835038334782143847837682Rat
1308174Fignfidgetin, microtubule severing factor34863751048760772Rat
41217695LOC120101556uncharacterized LOC12010155634911070749143091Rat
1598030Gatd1-ps1glutamine amidotransferase class 1 domain containing 1, pseudogene 134926662949267219Rat
61869Grb14growth factor receptor bound protein 1434956821049683805Rat
41043121LOC120102125U4 spliceosomal RNA34966123749661394Rat
6492288LOC100911508uncharacterized LOC10091150834973789049746043Rat
1308954Cobll1cordon-bleu WH2 repeat protein-like 134975326049915168Rat
41113803LOC120101557uncharacterized LOC12010155734978621349795843Rat
41083239LOC120101991U7 small nuclear RNA34982031849820381Rat
41244250Rps11-ps10ribosomal protein S11, pseudogene 1034987113849907924Rat
1306005Slc38a11solute carrier family 38, member 1134998711950033615Rat
41403016LOC120102041small nucleolar RNA SNORA1735005387150054023Rat
41148402LOC120102035small nucleolar RNA SNORA4835009309950093233Rat
3635Scn3asodium voltage-gated channel alpha subunit 335014641150258119Rat
3632Scn2asodium voltage-gated channel alpha subunit 235030278150437504Rat
41070396LOC120102075small nucleolar RNA SNORA1735049016850490295Rat
1306214Csrnp3cysteine and serine rich nuclear protein 335049837950695598Rat
1306443Galnt3polypeptide N-acetylgalactosaminyltransferase 335074250050779266Rat
1565122Ttc21btetratricopeptide repeat domain 21B35086136750935880Rat
41242060Rpl7a-ps19ribosomal protein L7a, pseudogene 1935089553250896545Rat
69364Scn1asodium voltage-gated channel alpha subunit 135095279051071804Rat
69368Scn9asodium voltage-gated channel alpha subunit 935114514851293342Rat
61922Scn7asodium voltage-gated channel alpha subunit 735133584151438308Rat
1560831Rps3l1ribosomal protein S3 like 135155968351560522Rat
1583266Rps7-ps5ribosomal protein S7, pseudogene 535192430851925946Rat
7676304LOC102553976uncharacterized LOC10255397635200823752112424Rat
41307402LOC120102067small nucleolar RNA SNORA1735209327752093408Rat
1302980Xirp2xin actin-binding repeat containing 235212621352213094Rat
1311898B3galt1Beta-1,3-galactosyltransferase 135225341352826508Rat
41057891LOC120102112U2 spliceosomal RNA35269669952696861Rat
621643Stk39serine threonine kinase 3935291358353179060Rat
6491326LOC100911723uncharacterized LOC10091172335292801152929487Rat
15976994932414N04RiklRIKEN cDNA 4932414N04 gene like35328445453518848Rat
1564400Eif5-ps1eukaryotic translation initiation factor 5, pseudogene 135356636553569726Rat
1561599Cers6ceramide synthase 635363063753879692Rat
1589692Ybx1-ps9Y box binding protein 1, pseudogene 935389125953892680Rat
727920Nostrinnitric oxide synthase trafficking35390474653970995Rat
1307811Spc25SPC25 component of NDC80 kinetochore complex35393001353988940Rat
69398G6pc2glucose-6-phosphatase catalytic subunit 235399982154005539Rat
619930Abcb11ATP binding cassette subfamily B member 1135401685454112797Rat
620655Dhrs9dehydrogenase/reductase 935414783454170052Rat
68407Lrp2LDL receptor related protein 235418930554346769Rat
41233961Rpl9-ps11ribosomal protein L9, pseudogene 1135177822951778790Rat
11377829Trnag-gcc1transfer RNA glycine (anticodon GCC) 134176254441762614Rat
41258230LOC120101550basic proline-rich protein-like34363026743632662Rat
9190663LOC103691811dynein light chain roadblock-type 1 pseudogene34388464343885168Rat
11422397LOC108350580uncharacterized LOC10835058034437592444379414Rat
11401909LOC108352563uncharacterized LOC10835256334571752245752406Rat
7530968Shoc2-ps1SHOC2 leucine-rich repeat scaffold protein, pseudogene 134730189447305302Rat
40992206Cfl1-ps10cofilin 1, pseudogene 1035435215454376010Rat
1310718Bbs5Bardet-Biedl syndrome 535441042954431831Rat
620852Klhl41kelch-like family member 4135443429154447415Rat
1563531Fastkd1FAST kinase domains 135444971054475624Rat
620315Ppigpeptidylprolyl isomerase G35448402354512929Rat
1308818Cfap210cilia and flagella associated protein 21035452045554554677Rat
1359274Phospho2phosphatase, orphan 235455482954561990Rat
1307166Klhl23kelch-like family member 2335458078854594530Rat
620804Ssbsmall RNA binding exonuclease protection factor La35461661654626203Rat
41097145LOC120102101small nucleolar RNA U1335462478454624882Rat
1566062Mettl5methyltransferase 5, N6-adenosine35462579054638066Rat
1565257Ubr3ubiquitin protein ligase E3 component n-recognin 335464980354806779Rat
41266482Hnrnpc-ps5heterogeneous nuclear ribonucleoprotein C, pseudogene 535472476254732130Rat
1560313Myo3bmyosin IIIB35482022555228518Rat
1308499Sp5Sp5 transcription factor35527493155277733Rat
41323100LOC120101561uncharacterized LOC12010156135529262955311439Rat
1563852Erich2glutamate-rich 235531099355347701Rat
2652Gad1glutamate decarboxylase 135536970455410335Rat
619911Gorasp2golgi reassembly stacking protein 235547444855503570Rat
41065835LOC120101562uncharacterized LOC12010156235550325255505088Rat
1310370Tlk1tousled-like kinase 135552055955627580Rat
1589691Fau-ps1FAU ubiquitin like and ribosomal protein S30 fusion, pseudogene 135563059055631800Rat
1565767Rpl15l2ribosomal protein L15 like 235569919155700292Rat
1561059Mettl8methyltransferase 8, tRNA N3-cytidine35573145355863652Rat
1565551Dcaf17DDB1 and CUL4 associated factor 1735586377655895601Rat
1305740Cybrd1cytochrome b reductase 135593487455962132Rat
11429097LOC108350392glyceraldehyde-3-phosphate dehydrogenase pseudogene35598325055993524Rat
41074405Gapdh-ps28Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2835598717755988204Rat
620174Dync1i2dynein cytoplasmic 1 intermediate chain 235603388256085080Rat
1305181Slc25a12solute carrier family 25 member 1235609716656191841Rat
1305716Hat1histone acetyltransferase 135621734456265021Rat
40932845LOC120102107U2 spliceosomal RNA35625625256256439Rat
7498194LOC102549016uncharacterized LOC10254901635626546556279458Rat
1307413Metap1dmethionyl aminopeptidase type 1D (mitochondrial)35627947156354518Rat
11426631LOC108350393uncharacterized LOC10835039335634059956364901Rat
1309593Dlx1distal-less homeobox 135635619056360780Rat
1304853Dlx2distal-less homeobox 235637023856373581Rat
7549589LOC102555148uncharacterized LOC10255514835646139656468036Rat
9400923LOC103691816uncharacterized LOC10369181635648552256490015Rat
2320728Mrps36-ps2mitochondrial ribosomal protein S36, pseudogene 235655290656553216Rat
621633Itga6integrin subunit alpha 635660451256689428Rat
69427Pdk1pyruvate dehydrogenase kinase 135670582456733040Rat
621886Rapgef4Rap guanine nucleotide exchange factor 435680938857101332Rat
41102588LOC120102074small nucleolar RNA SNORA1735682530756825429Rat
41371499LOC120102014small nucleolar RNA SNORA42/SNORA80 family35696432756964460Rat
41168553LOC120101564uncharacterized LOC12010156435712938257132860Rat
1561394Map3k20mitogen-activated protein kinase kinase kinase 2035713053957289943Rat
1309363Cdca7cell division cycle associated 735732271857333353Rat
41345808Rps13-ps7ribosomal protein S13, pseudogene 735738340157393461Rat
11478808LOC108350396uncharacterized LOC10835039635743095657470280Rat
2323302Dctd-ps1dCMP deaminase, pseudogene 135751697257520591Rat
40939229LOC120101566uncharacterized LOC12010156635755767357573426Rat
1587670Eno1-ps1enolase 1, pseudogene 135757664357578321Rat
41347799LOC120101442uncharacterized LOC12010144235759414057602949Rat
41134704LOC120101567NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like35768210557684325Rat
9224218LOC103691818uncharacterized LOC10369181835771057357714304Rat
11437224LOC108350397uncharacterized LOC10835039735772031357788490Rat
1583765Sp3Sp3 transcription factor35781185557857150Rat
9183373LOC103691820uncharacterized LOC10369182035791270257917164Rat
7612019LOC102546819uncharacterized LOC10254681935794069557992557Rat
1307982Ola1Obg-like ATPase 135796689658085955Rat
40949761Trnav-aac24transfer RNA valine (anticodon AAC) 2435807388858073969Rat
9330172LOC10369182160S ribosomal protein L27 pseudogene35808095058081356Rat
1559457Sp9Sp9 transcription factor35814682658149357Rat
1309199Cir1corepressor interacting with RBPJ, 135815892358188799Rat
1305064Scrn3secernin 335818882058213623Rat
1309162Gpr155G protein-coupled receptor 15535821642258270350Rat
620887Wipf1WAS/WASL interacting protein family, member 135831452158416668Rat
41387376Rbx1-ps2ring-box 1, pseudogene 235843219458432513Rat
11362073LOC108350398uncharacterized LOC10835039835844657458448992Rat
69277Chrna1cholinergic receptor nicotinic alpha 1 subunit35845476358469832Rat
620139Chn1chimerin 135850982258676462Rat
41236206LOC120101570uncharacterized LOC12010157035867828058682493Rat
41098957Rnu6-1136RNA, U6 small nuclear 113635868956358689673Rat
11486579Ube2s-ps4ubiquitin-conjugating enzyme E2S, pseudogene 435869707358699024Rat
621862Atf2activating transcription factor 235871832358795280Rat
41192492Rpl19-ps5ribosomal protein L19, pseudogene 535872247458723687Rat
41165060LOC120101572uncharacterized LOC12010157235879525758799419Rat
620052Atp5mc3ATP synthase membrane subunit c locus 335881053558813185Rat
9345818LOC103691823NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 pseudogene35887360558873938Rat
7527047LOC102552809uncharacterized LOC10255280935912311259135627Rat
1584075G3bp2-ps1G3BP stress granule assembly factor 2, pseudogene 135936089259362560Rat
41300198LOC120102034U1 spliceosomal RNA35940764159407795Rat
7554897Rps7-ps11ribosomal protein S7, pseudogene 1135941704159418716Rat
1312042Lnpklunapark, ER junction formation factor35941887259487029Rat
41300438LOC120101944U6 spliceosomal RNA35949095159491051Rat
2320625Rps26-ps2ribosomal protein S26, pseudogene 235949876459538211Rat
41245427LOC120101965U6 spliceosomal RNA35952174659521846Rat
1588374Ptma-ps8prothymosin alpha, pseudogene 835954774359548317Rat
1305594Evx2even-skipped homeobox 235955819759562267Rat
1308417Hoxd13homeo box D1335957064759573963Rat
1309797Hoxd12homeo box D1235957767759578798Rat
1306511Hoxd10homeo box D1035959451659597725Rat
1582908Hoxd9homeo box D935960057559602755Rat
6489440Hoxd8homeobox D835960779359610359Rat
40944736LOC120101573uncharacterized LOC12010157335961270659615030Rat
1309690Hoxd4homeo box D435961446459634042Rat
2325397Mir10bmicroRNA 10b35962843859628546Rat
1588601Hoxd3homeo box D335963870859650282Rat
41399479LOC120101574uncharacterized LOC12010157435965499259656589Rat
1309179Hoxd1homeo box D135966562959667769Rat
1306473Mtx2metaxin 235973020659792202Rat
41329305Snrpc-ps11small nuclear ribonucleoprotein polypeptide C, pseudogene 1136014329360143801Rat
41301375LOC120101575uncharacterized LOC12010157536019413760201089Rat
41246102LOC120101576uncharacterized LOC12010157636020335160208211Rat
11498171LOC108350401uncharacterized LOC10835040136027047060298941Rat
7733574LOC102554395uncharacterized LOC10255439536037104660401138Rat
41048592LOC120101577uncharacterized LOC12010157736038444460422413Rat
7566091LOC102554564uncharacterized LOC10255456436054150060544208Rat
727807Hnrnpa3heterogeneous nuclear ribonucleoprotein A336057857460588755Rat
620360Nfe2l2NFE2 like bZIP transcription factor 236059423960621712Rat
7560679Rpl10-ps3ribosomal protein L10, pseudogene 336062407960634739Rat
620364Agpsalkylglycerone phosphate synthase36074732360845831Rat
41031811Trnap-ggg5transfer RNA proline (anticodon GGG) 536075870560758779Rat
1590784Ift70bintraflagellar transport 70B36085580960858380Rat
1560121Ift70a2intraflagellar transport 70A236089919360901634Rat
2318157Ift70a1intraflagellar transport 70A136090189660905350Rat
621793Pde11aphosphodiesterase 11A36091356261297154Rat
41138727LOC120101579uncharacterized LOC12010157936096379660980819Rat
41199509LOC120101580uncharacterized LOC12010158036126693661268645Rat
2452Cyctcytochrome c, testis36129009061297158Rat
1596954Anp32a-ps1acidic nuclear phosphoprotein 32 family member A, pseudogene 136129134161293039Rat
628862Rbm45RNA binding motif protein 4536130597361320950Rat
1308887Osbpl6oxysterol binding protein-like 636134377661541170Rat
1306707Prkraprotein activator of interferon induced protein kinase EIF2AK236157544761594393Rat
1587131Pjvkpejvakin36159464461605051Rat
1305293Fkbp7FKBP prolyl isomerase 736160938461623710Rat
1305244Plekha3pleckstrin homology domain containing A336162343461644649Rat
621114Ttntitin36165243261924912Rat
41120841LOC120101583uncharacterized LOC12010158336170468761819104Rat
11408567LOC108350390uncharacterized LOC10835039035439624654402640Rat
9078858LOC103695171uncharacterized LOC10369517135704225157066815Rat
7704882LOC102555817dynein heavy chain 17, axonemal-like35769212657699221Rat
7606520Serpinb8l1serpin family B member 8 like 135848645558510222Rat
40928829LOC120102032small nucleolar RNA SNORA4835940862159408764Rat
7730597Hoxd11homeobox D1135958484059587257Rat
1593250Ccdc141coiled-coil domain containing 14136194861462109968Rat
1562244Sestd1SEC14 and spectrin domain containing 136212359062220759Rat
41312347Rnu6-480RNA, U6 small nuclear 48036216149362161596Rat
6500051Nsa2-ps20NSA2 ribosome biogenesis factor, pseudogene 2036227736762278418Rat
1311181Zfp385bzinc finger protein 385B36235518262640417Rat
41237371LOC120102119small nucleolar RNA U336259913262599217Rat
41353490LOC120101584uncharacterized LOC12010158436260438162611643Rat
1565385Cwc22CWC22 spliceosome associated protein36281523062864269Rat
41362468LOC120102114U2 spliceosomal RNA36292034662920495Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10625D3Mgh2013034711353147113655Ratregion
10678D3Mgh2118234187457841874764Ratregion
11260D3Mit830935030267950302886Ratregion
11261D3Wox912735043691350437042Ratregion
11262D3Wox1012635043691350437041Ratregion
11263D3Wox1426635043678550437053Ratregion
11264D3Arb723235043691250437162Ratregion
34146D3Mgh610735318459353184692Ratregion
34336D3Mgh714133945463739454780Ratregion
36311D3Rat3915535853954358539716Ratregion
37282D3Rat10317234539071445390751Ratregion
37282D3Rat10317234539071445390886Ratregion
37394D3Rat12322034480510444805331Ratregion
37538D3Rat11919735522363155223816Ratregion
35394D3Rat4331235053426450534572Ratregion
37032D3Rat6612735074962750749747Ratregion
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5502905Nfe2l2118136059512260596303Ratregion
5502973Nr4a27934169141541691642Ratregion
5503103CHRNA173935845983858460577Ratregion
5503742SCN1A_345191135095479750955708Ratregion
5503684FIGN__672359534864362048644215Ratregion
5504278D2S1570E19036172405061724240Ratregion
5504916Atf26435871938758719451Ratregion
5505426Tlk1100435552141255522416Ratregion
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5505065Scn1a41635043260850433910Ratregion
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5506453UniSTS:480790146635962960959631076Ratregion
5506614PTMA_1751035954805359548839Ratregion
5506989fd52b08.x1035443660854437968Ratregion
5506989fd52b08.x1035443661854437968Ratregion
5499737UniSTS:23443020135965120359651404Ratregion
5499687Acvr18334297980942980549Ratregion
5500987PMC109903P2034169161141692285Ratregion
5500330GDB:1928839135959718459597275Ratregion
5502786DPP420034696411146964311Ratregion
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5500769stSG612955035637685756377572Ratregion
5503536ANP32C__431474936129194061292660Ratregion
5503706UniSTS:46754065835964867659649334Ratregion
5501758MARC_11813-11814:1029266043:1035480345254803911Ratregion
5501786MARC_12189-12190:1004712897:113235624630856246939Ratregion
5501904MARC_17149-17150:1028234160:136234459259544592957Ratregion
5501666Hoxd13129135957109759572388Ratregion
5505618UniSTS:485602035430925454309840Ratregion
5502004MARC_23497-23498:1027358865:166736170426361704930Ratregion
5502996Dlx275535637233856373093Ratregion
5502331RH1245029035626481456264904Ratregion
Position Markers

Flank 1: (D3Mgh7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2339,454,637 - 39,454,780 (+)MAPPER
Rnor_6.0340,523,593 - 40,523,735NCBI
Rnor_5.0345,609,749 - 45,609,891UniSTS
RGSC_v3.4336,556,707 - 36,556,849UniSTS
RGSC_v3.4336,556,706 - 36,556,849RGD
RGSC_v3.1336,453,079 - 36,453,221RGD
Celera337,570,895 - 37,571,037UniSTS
RH 3.4 Map3492.7UniSTS
RH 3.4 Map3492.7RGD
RH 2.0 Map3241.3RGD
SHRSP x BN Map323.4998RGD
FHH x ACI Map327.9799RGD
Cytogenetic Map3q12UniSTS
Peak: (D3Wox9)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2350,436,913 - 50,437,042 (+)MAPPER
Rnor_6.0351,821,710 - 51,821,836NCBI
Rnor_5.0358,456,360 - 58,456,486UniSTS
RGSC_v3.4347,722,501 - 47,722,628RGD
RGSC_v3.4347,722,502 - 47,722,628UniSTS
Celera350,030,104 - 50,030,230UniSTS
Cytogenetic Map3q24UniSTS
Flank 2: (D3Arb8)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2362,951,008 - 62,951,183 (+)MAPPER
Rnor_6.0364,880,412 - 64,880,586NCBI
Rnor_5.0371,438,863 - 71,439,037UniSTS
RGSC_v3.4360,697,027 - 60,697,201UniSTS
RGSC_v3.4360,697,026 - 60,697,201RGD
RGSC_v3.1360,593,398 - 60,593,573RGD
Celera362,422,616 - 62,422,790UniSTS
SHRSP x BN Map339.4199RGD
SHRSP x BN Map339.4199UniSTS
FHH x ACI Map342.79RGD
Cytogenetic Map3 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)353184593115665732Rat
10401810Kidm53Kidney mass QTL 53kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3822719447233430Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)31500542276927699Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)32749462144188411Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)329463235118376539Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
631568Bp92Blood pressure QTL 922.20.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3139874793Rat
9590286Uminl1Urine mineral level QTL 13.50.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)32824968773249687Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)361017749121056321Rat
10450816Scl75Serum cholesterol level QTL 754.40.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)33819223350749747Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)350437504115638231Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)359242096157323038Rat
2313093Bmd77Bone mineral density QTL 772.20.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)32749462150302886Rat
1581503Cm58Cardiac mass QTL 582.70.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)343827364121056321Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)347233430110362260Rat
731180Bp152Blood pressure QTL 1520.03arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35378111291609953Rat
12879852Cm93Cardiac mass QTL 930.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)31831145447233430Rat
12879853Am5Aortic mass QTL 50.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)31831145447233430Rat
631200Cm25Cardiac mass QTL 254.80.0001heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)36113434889115068Rat
12879854Kidm63Kidney mass QTL 630.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)31831145447233430Rat
61356Bp37Blood pressure QTL 373blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)33068464275684642Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)31086191289878372Rat
12879849Bw180Body weight QTL 1800.037body mass (VT:0001259)body weight (CMO:0000012)31831145447233430Rat
70191BpQTLcluster4Blood pressure QTL cluster 43arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)31077870450302886Rat
12879850Cm91Cardiac mass QTL 910.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)31831145447233430Rat
2313101Bmd76Bone mineral density QTL 763.60.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)32749462150302886Rat
731172Bp151Blood pressure QTL 1510.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31831145447233430Rat
12879851Cm92Cardiac mass QTL 920.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)31831145447233430Rat
8694196Abfw2Abdominal fat weight QTL 216.580.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)32824968773249687Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)341874578155617519Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)314489145121056321Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)341874578155617519Rat
1582249Bw77Body weight QTL 773.20.0025epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)35318459364655484Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)3191609953Rat
12879868Am6Aortic mass QTL 60.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)33142640370668733Rat
11565451Bw177Body weight QTL 1770.002body mass (VT:0001259)body weight (CMO:0000012)33142640370668733Rat
10450852Stl33Serum triglyceride level QTL 333.40.05blood LDL triglyceride amount (VT:0010699)blood lipoprotein triglyceride level (CMO:0002685)33819223350749747Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)314489145121056321Rat
11565452Kidm57Kidney mass QTL 570.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)33142640370668733Rat
4889975Bmd81Bone mineral density QTL 814.3tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)33871036550302886Rat
12879866Cm94Cardiac mass QTL 940.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)33142640370668733Rat
12879867Cm95Cardiac mass QTL 950.047heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)33142640370668733Rat
1300178Hrtrt4Heart rate QTL 43.74heart pumping trait (VT:2000009)heart rate (CMO:0000002)34382736490905114Rat
61377Edpm3Estrogen-dependent pituitary mass QTL 37.050.038pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)35318469289878207Rat
2302055Pia30Pristane induced arthritis QTL 303.50.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)32793691972936919Rat
634317Bw117Body weight QTL 1173.58abdominal fat pad mass (VT:1000711)abdominal fat pad weight to body weight ratio (CMO:0000095)33945463753296578Rat
1331795Rf30Renal function QTL 303.708urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)33945463789115240Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
1354589Bw31Body weight QTL 313.3body mass (VT:0001259)body weight (CMO:0000012)33370334778196190Rat
2303593Gluco46Glucose level QTL 463blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)32846857173468571Rat
1354590Despr11Despair related QTL 110.000031locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)32846857173468571Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
2313079Bss73Bone structure and strength QTL 731.5tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)32749462150302886Rat
1331777Bw24Body weight QTL 243.503body mass (VT:0001259)body weight (CMO:0000012)33945463789115240Rat
631647Bp122Blood pressure QTL 1226.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)33068464275684642Rat
2313076Bss74Bone structure and strength QTL 7420.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)32749462150302886Rat
1300169Bp177Blood pressure QTL 1772.96arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)33370334761017857Rat
10450813Scl74Serum cholesterol level QTL 745.80.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)33819223350749747Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
2302276Bw82Body weight QTL 824.32body mass (VT:0001259)body weight (CMO:0000012)33945463762951183Rat
738019Anxrr10Anxiety related response QTL 103.9exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)33851780383517803Rat
9590136Scort3Serum corticosterone level QTL 323.370.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)32824968773249687Rat
10450804Scl70Serum cholesterol level QTL 704.70.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32071409065714090Rat
61419Cia11Collagen induced arthritis QTL 115.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)33035677398535386Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)341874578104104347Rat
8552950Pigfal12Plasma insulin-like growth factor 1 level QTL 127.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)32824968773249687Rat
631676Cm8Cardiac mass QTL 87.030.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)31695470861954708Rat
10450794Scl69Serum cholesterol level QTL 696.30.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32071409065714090Rat
8694386Bw159Body weight QTL 1594.520.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)32824968773249687Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)333703347104104347Rat
631665Bw8Body weight QTL 85.5body mass (VT:0001259)body weight (CMO:0000012)350437042119183768Rat
2313049Bss72Bone structure and strength QTL 722.60.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)32749462150302886Rat
2301400Cm68Cardiac mass QTL 680.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)33142640370668733Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)347233430110362260Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general measurement method: body weight was taken after overnight fasting for 16 hours at 60 wk of age 2298688
qtl_general software used: Map Manager QTX20b 2298688
qtl_general allele responsible: SDT allele involved in increased body weight 2298688
qtl_general number of animals used: 167 F2 males 2298688
qtl_map orthologous to human chr 2q23.3-32.1 and mouse chr 2 2298688